For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VVEQPQQGQLEMTLDNGAAGSVDSATTGPVQPGLFPDDSVPDQLVGYRGPSACQVAGITYRQLDYWARTS LVVPSIRSAAGSGSQRLYSFKDILVLKIVKRLLDTGISLQNIRVAVEHLRQRGVEDLANITLFSDGTTVY ECTSAEEVVDLLQGGQGVFGIAVSGAMRELTGAIAEFPGERADGGEAIEAPEDELASRRKDRARKIG
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. abscessus ATCC 19977 | MAB_2406 | - | - | 100% (207) | putative HTH-type transcriptional regulator |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1861 | - | 4e-97 | 85.58% (208) | hypothetical protein Mb1861 |
| M. gilvum PYR-GCK | Mflv_3399 | - | 2e-96 | 83.26% (215) | MerR family transcriptional regulator |
| M. tuberculosis H37Rv | Rv1830 | - | 4e-97 | 85.58% (208) | hypothetical protein Rv1830 |
| M. leprae Br4923 | MLBr_02073 | - | 1e-94 | 81.48% (216) | hypothetical protein MLBr_02073 |
| M. marinum M | MMAR_2707 | - | 1e-94 | 83.81% (210) | regulatory protein |
| M. avium 104 | MAV_2885 | - | 9e-97 | 85.65% (209) | transcriptional regulator, MerR family protein |
| M. smegmatis MC2 155 | MSMEG_3644 | - | 4e-92 | 93.30% (179) | transcriptional regulator, MerR family protein |
| M. thermoresistible (build 8) | - | - | - | - | - |
| M. ulcerans Agy99 | MUL_3049 | - | 5e-94 | 83.33% (210) | regulatory protein |
| M. vanbaalenii PYR-1 | Mvan_3132 | - | 2e-94 | 83.09% (207) | MerR family transcriptional regulator |
CLUSTAL 2.0.9 multiple sequence alignment
MMAR_2707|M.marinum_M MVAEAASDAASDTTARSARGNTVSDQPRQEQLDLAANPT------AGTNG
MUL_3049|M.ulcerans_Agy99 ----------------------MSDQPRQEQLDLAANPT------AGTNG
MAV_2885|M.avium_104 ----------------------MSEQPRQEQLNLAEDGN------AGT-G
Mb1861|M.bovis_AF2122/97 -------MTQLVTRARSARGSTLGEQPRQDQLDFADHTG-----TAGD-G
Rv1830|M.tuberculosis_H37Rv -------MTQLVTRARSARGSTLGEQPRQDQLDFADHTG-----TAGD-G
MLBr_02073|M.leprae_Br4923 -------MTHLVTRARSARGNTVSEQPRQGQLDLADYRDTPTATTHGDIG
Mflv_3399|M.gilvum_PYR-GCK ---MSAPTQVKDAGSIGERIRQVGDTPRQGQLDLTTDSGTDSG-TGTTET
Mvan_3132|M.vanbaalenii_PYR-1 ----------------------MGDTPRQEELDLTGSS---------PQP
MSMEG_3644|M.smegmatis_MC2_155 -------------------------------MDLTTGA------------
MAB_2406|M.abscessus_ATCC_1997 ----------------------MVEQPQQGQLEMTLDNG---------AA
::::
MMAR_2707|M.marinum_M SYDGSAAGEPVQQGLFPDDSVPDELVGYRGPSACQIAGITYRQLDYWART
MUL_3049|M.ulcerans_Agy99 SYDGSAAGEPVQQGLFPDDSVPDELVGYRGPSACQIASITYRQLDYWART
MAV_2885|M.avium_104 ERSVTAAAAPVQPGLFPDDSVPDELVGYRGPSACQIAGITYRQLDYWART
Mb1861|M.bovis_AF2122/97 NDGAAAASGPVQPGLFPDDSVPDELVGYRGPSACQIAGITYRQLDYWART
Rv1830|M.tuberculosis_H37Rv NDGAAAASGPVQPGLFPDDSVPDELVGYRGPSACQIAGITYRQLDYWART
MLBr_02073|M.leprae_Br4923 LNGPTAVSGPAQPGLFPDDSVPDELVGYRGPSACQIAGITYRQLDYWART
Mflv_3399|M.gilvum_PYR-GCK EGQPRAVSEPVQGGLFPDDSVPDELVGYRGPSACQIAGITYRQLDYWART
Mvan_3132|M.vanbaalenii_PYR-1 DPLPRVVAEPVQAGLFPDDSVPDELVGYRGPSACQIAGITYRQLDYWART
MSMEG_3644|M.smegmatis_MC2_155 EPPVRPSSEPVQAGLFPDDSVPDELVGYRGPSACQIAGITYRQLDYWART
MAB_2406|M.abscessus_ATCC_1997 GSVDSATTGPVQPGLFPDDSVPDQLVGYRGPSACQVAGITYRQLDYWART
*.* **********:***********:*.************
MMAR_2707|M.marinum_M SLVVPSIRGAAGSGSQRLYSFKDILVLKIVKRLLDTGISLHNIRVAVDHL
MUL_3049|M.ulcerans_Agy99 SLVVPSIRGAAGSGSQRLYSFKDILVLKIVKRLLDTGISLHNIRVAVDHL
MAV_2885|M.avium_104 SLVVPSIRSAAGSGSQRLYSFKDILVLKIVKRLLDTGISLHNIRVAVDHL
Mb1861|M.bovis_AF2122/97 SLVVPSIRSAAGSGSQRLYSFKDILVLKIVKRLLDTGISLHNIRVAVDHL
Rv1830|M.tuberculosis_H37Rv SLVVPSIRSAAGSGSQRLYSFKDILVLKIVKRLLDTGISLHNIRVAVDHL
MLBr_02073|M.leprae_Br4923 SLVVPSIRGAAGSGSQRLYSFKDILVLKIVKRLLDTGISLHNIRVAVDHL
Mflv_3399|M.gilvum_PYR-GCK SLVVPSIRGAAGSGSQRLYSFKDILVLKIVKRLLDTGISLHNIRVAVDHL
Mvan_3132|M.vanbaalenii_PYR-1 SLVVPSIRGAAGSGSQRLYSFKDILVLKIVKRLLDTGISLHNIRVAVDHL
MSMEG_3644|M.smegmatis_MC2_155 SLVVPSIRSAAGSGSQRLYSFKDILVLKIVKRLLDTGISLHNIRVAVDHL
MAB_2406|M.abscessus_ATCC_1997 SLVVPSIRSAAGSGSQRLYSFKDILVLKIVKRLLDTGISLQNIRVAVEHL
********.*******************************:******:**
MMAR_2707|M.marinum_M RQRGVQDLANITLFSDGTTVYECTSAEEVVDLLQGGQGVFGIAVSGAMRE
MUL_3049|M.ulcerans_Agy99 RQRGVQDLANITLFSDGTTVYECTSAEEVVDLLQGGQGVFGIAVSGAMRE
MAV_2885|M.avium_104 RQRGVEDLANITLFSDGTTVYECTSAEEVVDLLQGGQGVFGIAVSGAMRE
Mb1861|M.bovis_AF2122/97 RQRGVQDLANITLFSDGTTVYECTSAEEVVDLLQGGQGVFGIAVSGAMRE
Rv1830|M.tuberculosis_H37Rv RQRGVQDLANITLFSDGTTVYECTSAEEVVDLLQGGQGVFGIAVSGAMRE
MLBr_02073|M.leprae_Br4923 RQRGVQDLANITLFSDGTTVYECTSAEEVVDLLQGGQGVFGIAVSGAMRE
Mflv_3399|M.gilvum_PYR-GCK RQRGVQDLANITLFSDGTTVYECTSAEEVVDLLQGGQGVFGIAVSGAMRE
Mvan_3132|M.vanbaalenii_PYR-1 RQRGVQDLANITLFSDGTTVYECTSAEEVVDLLQGGQGVFGIAVSGAMRE
MSMEG_3644|M.smegmatis_MC2_155 RQRGVQDLANITLFSDGTTVYECTSAEEVVDLLQGGQGVFGIAVSGAMRE
MAB_2406|M.abscessus_ATCC_1997 RQRGVEDLANITLFSDGTTVYECTSAEEVVDLLQGGQGVFGIAVSGAMRE
*****:********************************************
MMAR_2707|M.marinum_M LTGVIADFHGERADGGESIAAPEDELASRRKHRDRKIG
MUL_3049|M.ulcerans_Agy99 LTGVIADFHGERADGGESIAAPEDELASRRKHRDRKIG
MAV_2885|M.avium_104 LTGVIADFPGERADGGESIAEPEDELASRRKHRDRKIG
Mb1861|M.bovis_AF2122/97 LTGVIADFHGERADGGESIAAPEDELASRRKHRDRKIG
Rv1830|M.tuberculosis_H37Rv LTGVIADFHGERADGGESIAAPEDELASRRKHRDRKIG
MLBr_02073|M.leprae_Br4923 LTGVIDDFRGERADGGESIAAPEDELASRRKHRDRKIG
Mflv_3399|M.gilvum_PYR-GCK LTGAIADFPGERADGGESISAPEDELASRRKHRDRKIG
Mvan_3132|M.vanbaalenii_PYR-1 LTGAIADFPGERADGGESISAPEDELASRRKSRDRKIG
MSMEG_3644|M.smegmatis_MC2_155 LTGVIADFPSERADGGEAIAAPEDELASRRKSRDRKIG
MAB_2406|M.abscessus_ATCC_1997 LTGAIAEFPGERADGGEAIEAPEDELASRRKDRARKIG
***.* :* .*******:* ********** * ****