For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. abscessus ATCC 19977 MAB_1634c (rpsT)

annotation: 30s ribosomal protein S20
coordinates: 1663746 - 1664006
length: 86

ANIKSQEKRIRTNERARLRNQATKSSLRTAIRGLREAIAEGDKEKAGELLVSTSRKLDKAVTKGVIHKNQ
AANKKSALALALNKL*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. abscessus ATCC 19977MAB_1634crpsT-100% (86)30s ribosomal protein S20

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb2435rpsT2e-3280.23% (86) 30S ribosomal protein S20
M. gilvum PYR-GCKMflv_2665rpsT3e-3377.91% (86) 30S ribosomal protein S20
M. tuberculosis H37RvRv2412rpsT2e-3280.23% (86) 30S ribosomal protein S20
M. leprae Br4923MLBr_00604rpsT1e-3277.91% (86) 30S ribosomal protein S20
M. marinum MMMAR_3733rpsT6e-3380.23% (86) 30S ribosomal protein S20 RpsT
M. avium 104MAV_1770rpsT7e-3380.23% (86) 30S ribosomal protein S20
M. smegmatis MC2 155MSMEG_4571rpsT2e-3382.56% (86) 30S ribosomal protein S20
M. thermoresistible (build 8)TH_1458rpsT3e-2872.09% (86) PROBABLE 30S RIBOSOMAL PROTEIN S20 RPST
M. ulcerans Agy99MUL_3676rpsT4e-3380.23% (86) 30S ribosomal protein S20
M. vanbaalenii PYR-1Mvan_3912rpsT2e-3175.58% (86) 30S ribosomal protein S20

CLUSTAL 2.0.9 multiple sequence alignment


Mflv_2665|M.gilvum_PYR-GCK          MANIKSQQKRILTNERRRLRNKSVKSSLHTAVRGFREAVESGDKEKAGEL
Mvan_3912|M.vanbaalenii_PYR-1       MANIKSQQKRILTNERRRLRNKSVKSSLHTAVRGFRAAVEAGDKDKAGEL
MAB_1634c|M.abscessus_ATCC_199      MANIKSQEKRIRTNERARLRNQATKSSLRTAIRGLREAIAEGDKEKAGEL
MSMEG_4571|M.smegmatis_MC2_155      MANIKSQIKRIRTNERRRLRNQSVKSSLRTAIRGFREAVDAGDKDKASEL
MMAR_3733|M.marinum_M               MANIKSQQKRNRTNERARLRNKSVKSSLRTAVRSFRDAAHSGDKEKAAEL
MUL_3676|M.ulcerans_Agy99           MANIKSQQKRNRTNERARLRNKSVKSSLRTAVRSFRDAAHSGDKEKAAEL
Mb2435|M.bovis_AF2122/97            MANIKSQQKRNRTNERARLRNKAVKSSLRTAVRAFREAAHAGDKAKAAEL
Rv2412|M.tuberculosis_H37Rv         MANIKSQQKRNRTNERARLRNKAVKSSLRTAVRAFREAAHAGDKAKAAEL
MAV_1770|M.avium_104                MANIKSQQKRNKTNERARLRNKSVKSSLRTAVRAFREAAHAGDKEKAAEL
MLBr_00604|M.leprae_Br4923          MTNIKSQQKRNRTNERARLRNKSVKSSLRTAVRAFREAVHAGEKEKAAKL
TH_1458|M.thermoresistible__bu      VANIKSQEKRNRQNERRRLRNKSVKSSLNTAVRRYREALEAGDKAKAEEL
                                    ::***** **   *** ****::.****.**:*  * *   *:* ** :*

Mflv_2665|M.gilvum_PYR-GCK          LLATSRKLDKAASKGVIHKNQAANRKSALARALNKI-
Mvan_3912|M.vanbaalenii_PYR-1       LASTSRKLDKAASKGVIHKNQAANRKSALAKALQKI-
MAB_1634c|M.abscessus_ATCC_199      LVSTSRKLDKAVTKGVIHKNQAANKKSALALALNKL-
MSMEG_4571|M.smegmatis_MC2_155      LHATSRKLDKAASKGVIHPNQAANKKSALALALNKL-
MMAR_3733|M.marinum_M               LVSTNRKLDKAASKGVIHKNQAANKKSALARALNKLG
MUL_3676|M.ulcerans_Agy99           LVSTNRKLDKAASKGVIHKNQAANKKSALARALNKLG
Mb2435|M.bovis_AF2122/97            LASTNRKLDKAASKGVIHKNQAANKKSALAQALNKL-
Rv2412|M.tuberculosis_H37Rv         LASTNRKLDKAASKGVIHKNQAANKKSALAQALNKL-
MAV_1770|M.avium_104                LVSTNRKLDKAASKGVIHKNQAANKKSALAQALNKL-
MLBr_00604|M.leprae_Br4923          LVSTSRKLDKAASKGVIHKNQAANKKSALARTLNKL-
TH_1458|M.thermoresistible__bu      LHATSRKLDKAASKGVIHKNQAANRKSALWQAFNKI-
                                    * :*.******.:***** *****:****  :::*: