For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
RISKLFAGRVARGVAGTVVAAAMAGTALVGAPLAGASAQSFCGELGGNFDGLYCHTVITSPRKADRDIKV AIPGDLVDNGTTGPTIRDYLRNLYNNWKAKGADMIQDSYGEENFQVFHHGNAMSVVFHEDYHANGPQTNN AYRTFTWDMSTGKRLQLVDILKPGLGLDAITPLAEPYLLEGFDRAAWAHSPGTYPFVPERWTPDKVYSGG YKAWALTPDELVIYMPDYPVAHDYPIDYTPGAQVWSMDGGTVEAHIPIGAVAPILRPGYGG*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. abscessus ATCC 19977 | MAB_1003c | - | - | 100% (272) | hypothetical protein MAB_1003c |
M. abscessus ATCC 19977 | MAB_0093 | - | 2e-13 | 23.13% (268) | hypothetical protein MAB_0093 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | Mflv_0003 | - | 1e-78 | 52.65% (264) | hypothetical protein Mflv_0003 |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. marinum M | MMAR_0160 | - | 1e-107 | 68.22% (258) | hypothetical protein MMAR_0160 |
M. avium 104 | MAV_0109 | - | 1e-104 | 67.72% (254) | hypothetical protein MAV_0109 |
M. smegmatis MC2 155 | MSMEG_1150 | - | 2e-95 | 61.87% (257) | hypothetical protein MSMEG_1150 |
M. thermoresistible (build 8) | TH_0151 | - | 4e-96 | 64.57% (254) | conserved hypothetical protein |
M. ulcerans Agy99 | MUL_4936 | - | 1e-105 | 69.20% (250) | hypothetical protein MUL_4936 |
M. vanbaalenii PYR-1 | Mvan_0966 | - | 2e-97 | 63.89% (252) | hypothetical protein Mvan_0966 |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_0160|M.marinum_M ------MSGWKAALAAG----VLVAGCAVSTAPSAWGSAQSFCGELGGDF MUL_4936|M.ulcerans_Agy99 ---------------------MLVAGCAVSTAPSAWGSAQSFCGELGGDF MAB_1003c|M.abscessus_ATCC_199 MRISKLFAGRVARGVAGTVVAAAMAGTALVGAPLAGASAQSFCGELGGNF MAV_0109|M.avium_104 MRIFQFSVG------------AAAVTMAALTAPVASASAQSFCGDLGGDW MSMEG_1150|M.smegmatis_MC2_155 -MESKQGRAALSMKRFGALIGAALTVVALATAASAGASVVSFCDDLAGRM Mvan_0966|M.vanbaalenii_PYR-1 ------------MRR--AFAAAAAAATLLATAPTASASAVAFCDGLGGSW TH_0151|M.thermoresistible__bu -------------------VVAVPVAAALLTAPSAHASAPSFCGEIGGQW Mflv_0003|M.gilvum_PYR-GCK ----------MVRRLTCSGVAAVLASVVMATASPASASAASFCDELGGQW . *. * .*. :**. :.* MMAR_0160|M.marinum_M DGRYCHTTVTSVRKADRDIRMAIPGDLVDNAVSGPVVRDYLRTLYNNWRE MUL_4936|M.ulcerans_Agy99 DGRYCHTTVTSVRKADRDIRMAIPGDLVDNAVSGPVVREYLRTLYNNWRE MAB_1003c|M.abscessus_ATCC_199 DGLYCHTVITSPRKADRDIKVAIPGDLVDNGTTGPTIRDYLRNLYNNWKA MAV_0109|M.avium_104 DGQYCHTSVLSERKAVRDIKMAMPGDLIDNPTSGPPIRQYLRTLMTNWRS MSMEG_1150|M.smegmatis_MC2_155 DGPYCNLSIESDRKATRDIKVAIPGELVDDPVAGPVVRDYLSTLVGNWMK Mvan_0966|M.vanbaalenii_PYR-1 NGQYCHTTVQSERNAVRDIKVAIPAELVDDPVAGPVVRDYLSTLVNNWKT TH_0151|M.thermoresistible__bu DGRYCRTTVESVRKATRDIKIAIPGDLVDHPTTGPVIRDYLSTLMNNWRN Mflv_0003|M.gilvum_PYR-GCK DGQFCTTSVVSERKATRDIRMALPGDLVEN----PVIRAYLTTLMNNWRN :* :* : * *:* ***::*:*.:*::. * :* ** .* ** MMAR_0160|M.marinum_M KGADMVQDSWGEENYQQFGHQSAVSVVFHEDY----------HADGPKIN MUL_4936|M.ulcerans_Agy99 KGADMVQDSWGEENYQQFGHQSAVSVVFHEDY----------RADGPKIN MAB_1003c|M.abscessus_ATCC_199 KGADMIQDSYGEENFQVFHHGNAMSVVFHEDY----------HANGPQTN MAV_0109|M.avium_104 KGASMVQDSWGEENFQVFGHGPAQSVVFHEDY----------HADGPAFN MSMEG_1150|M.smegmatis_MC2_155 AGQKMVADSFGEGNYQIFRHGDALSVVFRETY----------HADGPDFN Mvan_0966|M.vanbaalenii_PYR-1 VGVKMVADSYGEGNYQIFRRGDVMSAVFRETY----------HADGPDFN TH_0151|M.thermoresistible__bu AATDMVADSFGEGNHQVFRRGDVLSVVFRETY----------HADGPDFN Mflv_0003|M.gilvum_PYR-GCK AATKMVQNSFGEQHFQILHRGEAMTAVFHEMYSGTVGTDALAHPNAPIVS . .*: :*:** :.* : : . :.**:* * :.:.* . MMAR_0160|M.marinum_M NAYRTFTFDTALGRQLQLTDIVKAGLDPLAVIPPLAEPFVAAALDRAAPP MUL_4936|M.ulcerans_Agy99 NAYRTFTFDTALGRQLQLTDIVKAGLDPLAVIPPLAEPFVAAALDRAAPP MAB_1003c|M.abscessus_ATCC_199 NAYRTFTWDMSTGKRLQLVDILKPGLG-LDAITPLAEPYLLEGFDRAAWA MAV_0109|M.avium_104 NAYRTFTFDMANGRQLQLADITKPGVDPLAAIPPLAEPFIQEALDRAAWQ MSMEG_1150|M.smegmatis_MC2_155 NAYRTFTFDMAEGRRLQLADLMKPGVDPLTAIPPLAQPFIVQALDQAPPP Mvan_0966|M.vanbaalenii_PYR-1 NAYRTFTFDMASGARLQLADLLKPGVA-LSAIPPLAHPFIVRALDDAPPP TH_0151|M.thermoresistible__bu NAYRTFTFDMANGRRLQLADLVKPGVDPLTEIPPLARPYIEQALDVAPPP Mflv_0003|M.gilvum_PYR-GCK DAYRTFTF--VGGRQVQLADLFKPGVDHLAEIPRLGAPFIVAALDAAPPP :******: * ::**.*: *.*: * *. *. *:: .:* *. MMAR_0160|M.marinum_M HQPGTYPFTVDRWTPDKVYSGGYKAWALTPSELILYLPDYPVAHDNPINY MUL_4936|M.ulcerans_Agy99 HQPGTYPFTVDRWTPDKVYSGGYKAWALTPSELILYLPDYPVAHDNPINY MAB_1003c|M.abscessus_ATCC_199 HSPGTYPFVPERWTPDKVYSGGYKAWALTPDELVIYMPDYPVAHDYPIDY MAV_0109|M.avium_104 HSPGTYPFTVDRWTPDKVFSGGYKAWALTPDELILYLPDYPVGHDSPIQY MSMEG_1150|M.smegmatis_MC2_155 HQPGTYPFVFDRWLPDKVYSGAYKAWALTPDELIIYMPDYPVARDRPTDF Mvan_0966|M.vanbaalenii_PYR-1 HQPGSYPFVADRWTPDKVYSGGYKAWALTPDELVIYMPDYPVGRDSPTNF TH_0151|M.thermoresistible__bu HQPRTYPFIFERWTPDKVYSGAYKAWALNGDELVIYMPDYPVARDRPTDF Mflv_0003|M.gilvum_PYR-GCK HQPGTYPFTPDRWTPDKVYSGGYKAWAISGDELILYMPDYPVGRDTPTNF *.* :*** :** ****:**.*****:. .**::*:*****.:* * :: MMAR_0160|M.marinum_M EPGMPVWSMDGGAVEAHIPIDVLAPVLRSGYGG-- MUL_4936|M.ulcerans_Agy99 EPGMPVWSMDGGAVEAHIPIDVLAPVLRSGYGG-- MAB_1003c|M.abscessus_ATCC_199 TPGAQVWSMDGGTVEAHIPIGAVAPILRPGYGG-- MAV_0109|M.avium_104 GQ-SEQWSMDGGTAQPHIPLGVLAPVLRPEFGGA- MSMEG_1150|M.smegmatis_MC2_155 TPGVMQWSMDGGTVQAHIPLAALAPILQPRYGGA- Mvan_0966|M.vanbaalenii_PYR-1 TPGIMQWSMDGGTVQAHIPLAALAPILRPEFGGA- TH_0151|M.thermoresistible__bu TPGVMQWSMDGGTVQAHIPLSALAPILRPEYGGSR Mflv_0003|M.gilvum_PYR-GCK TPGLMQWSMDGGTVQARIPLAALAPVLRPEFGGSP ******:.:.:**: .:**:*:. :**