For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
AGSGEFDNLDQALITAMYAHPRAGALELSRNLHVARATVQARLEKLEDSGVIEGYEPRINLAAAGFGVQA FVTLEIAQGALSRVSDELAAIPGVLEAYATTGDGDVLCRVAAESHDRLQQTLLELNQSGVVQRSTSVIAL SVVVPPRVLPLLQSREVDRPATRAPAYRKTQQ*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. abscessus ATCC 19977 | MAB_0892c | - | - | 100% (173) | AsnC family transcriptional regulator |
M. abscessus ATCC 19977 | MAB_0898 | - | 8e-17 | 37.40% (131) | AsnC family transcriptional regulator |
M. abscessus ATCC 19977 | MAB_4919 | - | 1e-14 | 30.61% (147) | AsnC family transcriptional regulator |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2351 | - | 9e-12 | 27.46% (142) | AsnC family transcriptional regulator |
M. gilvum PYR-GCK | Mflv_4434 | - | 3e-13 | 29.93% (147) | AsnC family transcriptional regulator |
M. tuberculosis H37Rv | Rv2324 | - | 9e-12 | 27.46% (142) | AsnC family transcriptional regulator |
M. leprae Br4923 | - | - | - | - | - |
M. marinum M | MMAR_4047 | - | 7e-19 | 30.67% (150) | Lrp/AsnC family transcriptional regulator |
M. avium 104 | MAV_2084 | - | 2e-10 | 26.76% (142) | AsnC-family protein transcriptional regulator |
M. smegmatis MC2 155 | MSMEG_2472 | - | 2e-18 | 32.21% (149) | AsnC-family protein transcriptional regulator |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | MUL_3913 | - | 8e-19 | 30.67% (150) | Lrp/AsnC family transcriptional regulator |
M. vanbaalenii PYR-1 | Mvan_1289 | - | 6e-12 | 27.14% (140) | AsnC family transcriptional regulator |
CLUSTAL 2.0.9 multiple sequence alignment Mb2351|M.bovis_AF2122/97 --------------MDRLDDTDERILAELAEHARATFAEIGHKVSLSAPA Rv2324|M.tuberculosis_H37Rv --------------MDRLDDTDERILAELAEHARATFAEIGHKVSLSAPA MAV_2084|M.avium_104 --------------MDRLDDTDERILAELTEQARVTFAEIGDKVNLSAPA Mvan_1289|M.vanbaalenii_PYR-1 --------------MDRLDETDERILAELADNARATFAEIGQQVNLSAPA MMAR_4047|M.marinum_M ----------MPKRDHLIDDIDTQILHALIKDPRAAVVALAHTTGLARNT MUL_3913|M.ulcerans_Agy99 MCYFGLKEGNMPKRDHLIDDIDTQILHALIKDPRAPVVALAHTTGLARNT MSMEG_2472|M.smegmatis_MC2_155 ----------MRKTDARIDDIDARILRALSADPRATVVGLAEATGLARNT Mflv_4434|M.gilvum_PYR-GCK ----------MTR----LDRTDARLLLALCDAPRATGVQLAAMLNLARNT MAB_0892c|M.abscessus_ATCC_199 -----------MAGSGEFDNLDQALITAMYAHPRAGALELSRNLHVARAT :* * :: : .*. :. :: : Mb2351|M.bovis_AF2122/97 VKRRVDRMLESGVIKGFTTVVDRNALGWNTEAYVQIFCHGRIAPDQLRAA Rv2324|M.tuberculosis_H37Rv VKRRVDRMLESGVIKGFTTVVDRNALGWNTEAYVQIFCHGRIAPDQLRAA MAV_2084|M.avium_104 VKRRVDRMLDSGVIKGFTTVVDRNALGWNTEAYVQVFCHGRIAPDELRTA Mvan_1289|M.vanbaalenii_PYR-1 VKRRVDRMLDSGVIKGFTTVIDRSALGWTTEAFVQVFCHGTIAPTELRAA MMAR_4047|M.marinum_M IHARLAKLEADGVLQSFERRIDPAALGYSLTAFIMVTVT-QRKLGEIGNA MUL_3913|M.ulcerans_Agy99 IHARLAKLEADGVLQSFERRIDPAALGYSLTAFIMVTVT-QRKLGEIGNA MSMEG_2472|M.smegmatis_MC2_155 VHARLARLEAEGALRSFERRIDPAALGFPLTGYIMVVVT-QRKLAGIAEA Mflv_4434|M.gilvum_PYR-GCK VQARLARWDQDNVLAPIDRCVSPRDLGYPLKAFITVVVD-QHKLEDVIAE MAB_0892c|M.abscessus_ATCC_199 VQARLEKLEDSGVIEGYEPRINLAAAGFGVQAFVTLEIA-QGALSRVSDE :: *: : ...: :. *: .:: : : Mb2351|M.bovis_AF2122/97 WVNIPEVVSAATVTGTSDAILHVLAHDMRHLEAALERIRSSADVERSEST Rv2324|M.tuberculosis_H37Rv WVNIPEVVSAATVTGTSDAILHVLAHDMRHLEAALERIRSSADVERSEST MAV_2084|M.avium_104 WVDIPEVFSAATVTGTPDAILHVLARDMRHLEVALERIRSSADVERSESI Mvan_1289|M.vanbaalenii_PYR-1 WKDIPEVVSAATVTGTSDAMLHVLARDMRHLEEALERIRASADIERSESI MMAR_4047|M.marinum_M LEGVPEVLEVHGLSGVTDLLVHIVARNAEDLYRIAGQILDIDGVEKTTTG MUL_3913|M.ulcerans_Agy99 LEGVPEVLEVHGLSGVTDLLVHIVARNAEDLYRIAGQILDIDGVEKTTTG MSMEG_2472|M.smegmatis_MC2_155 LAEVPEVLEVHGLSGVTDLLVHIVARDTDDLYRVAGRILDIDGVEKTTTS Mflv_4434|M.gilvum_PYR-GCK LATVSQITQVTGLSGAADLLIAVVATDADDLYRVAGLVLAVPGVERTTMS MAB_0892c|M.abscessus_ATCC_199 LAAIPGVLEAYATTGDGDVLCRVAAESHDRLQQTLLELNQSGVVQRSTSV :. : .. :* * : : * . * : :::: Mb2351|M.bovis_AF2122/97 VVLSNLIDRMPP----------------------- Rv2324|M.tuberculosis_H37Rv VVLSNLIDRMPP----------------------- MAV_2084|M.avium_104 VVLSNLIDRMRP----------------------- Mvan_1289|M.vanbaalenii_PYR-1 VVLSNLIERASR----------------------- MMAR_4047|M.marinum_M LVMRRLVDYRLSPLLASAQSTGK------------ MUL_3913|M.ulcerans_Agy99 LVMRRLVDYRLSPLLASAQSTGK------------ MSMEG_2472|M.smegmatis_MC2_155 LVMRSLVDYRVGPLLNGRG---------------- Mflv_4434|M.gilvum_PYR-GCK IAMHEVIAYRTRPLIEELARGR------------- MAB_0892c|M.abscessus_ATCC_199 IALSVVVPPRVLPLLQSREVDRPATRAPAYRKTQQ :.: ::