For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
APLIALVVGTLSARLAGILGLAPADSWPAAVAVGLAAMFTLTGIAHFVPKMRDAMIAIVPPRIPAPGFLV ALTGALELLGAAGVLIPATRVVAAASLAALLVAMFPANVYAASQRSNPLSTPLGWRTLEQLLFLAAAATA ACG*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. abscessus ATCC 19977 | MAB_0498c | - | - | 100% (144) | hypothetical protein MAB_0498c |
M. abscessus ATCC 19977 | MAB_0592c | - | 1e-06 | 39.77% (88) | hypothetical protein MAB_0592c |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | - | - | - | - | - |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. marinum M | MMAR_4907 | - | 6e-46 | 62.33% (146) | hypothetical protein MMAR_4907 |
M. avium 104 | MAV_0726 | - | 5e-40 | 56.85% (146) | hypothetical protein MAV_0726 |
M. smegmatis MC2 155 | MSMEG_5840 | - | 4e-42 | 60.27% (146) | hypothetical protein MSMEG_5840 |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | MUL_0499 | - | 1e-46 | 63.01% (146) | hypothetical protein MUL_0499 |
M. vanbaalenii PYR-1 | Mvan_5136 | - | 6e-41 | 59.73% (149) | hypothetical protein Mvan_5136 |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_4907|M.marinum_M ----------MAPMITLVLGSIVARIIGQLG---VAYLDSWSAAIAVGLA MUL_0499|M.ulcerans_Agy99 ----------MAPMITLVLGSIVARIIGQLG---VAYLDSWSAAIAVGLA MAV_0726|M.avium_104 MSVSRLWEVGMAPLITLVVGSLVAWVVGRLG---VAYVDGWAPALAVGLA MSMEG_5840|M.smegmatis_MC2_155 ----------MAVFATLVLGTVIARIVGLLG---VAYVDTWSSAAAVGLA Mvan_5136|M.vanbaalenii_PYR-1 ----------MIVVVTLIVGTLAARLVGLLGPQSWDYLDSWPKAVAVGLA MAB_0498c|M.abscessus_ATCC_199 ----------MAPLIALVVGTLSARLAGILG---LAPADSWPAAVAVGLA * . :*::*:: * : * ** * *. * ***** MMAR_4907|M.marinum_M AMFTLTGIAHFAPPLRGDLVAIVPPRLPAPGLLVSITGALELLGAAGLLL MUL_0499|M.ulcerans_Agy99 AMFTLTGIAHFAPPLRGDLVAIVPPRLPAPGLLVSITGALELLGAAGLLL MAV_0726|M.avium_104 AMFVLTGIAHFAPPLRADLVVIVPPRLPAPGLLVSLTGVLELLGALGLLL MSMEG_5840|M.smegmatis_MC2_155 AMFALTGIAHFVDPLRRDMIAIVPPRLPAPGLLVTVTGALELLGAAGLLY Mvan_5136|M.vanbaalenii_PYR-1 AMFVLTGVAHFVNPLRRDMIAIVPPRLPAPAALVTITGVLELLGAVGLLY MAB_0498c|M.abscessus_ATCC_199 AMFTLTGIAHFVPKMRDAMIAIVPPRIPAPGFLVALTGALELLGAAGVLI ***.***:***. :* ::.*****:***. **::**.****** *:* MMAR_4907|M.marinum_M PVTRVAAALCFLILMLAMFPANIYAARMPSPPKSMTTRLSVRSAEELVFL MUL_0499|M.ulcerans_Agy99 PVTRVAAALCLLILMLAMFPANIYAARMPSPPKSMTTRLSVRSAEELVFL MAV_0726|M.avium_104 PATRAAAAGCLLVLMLAMFPANIHASRMPDPPKSMTTRLPLRIGMEIVFL MSMEG_5840|M.smegmatis_MC2_155 PPTRVAAAVCLFVLMLAMFPANVYAARMPDPPKSMTSKLGVRTAEEGVYL Mvan_5136|M.vanbaalenii_PYR-1 PPTRAAAACGLALLMVLMFPANVYAARMPDAPTSMATRLGPRTVEQVGFL MAB_0498c|M.abscessus_ATCC_199 PATRVVAAASLAALLVAMFPANVYAASQRSNP--LSTPLGWRTLEQLLFL * **..** : *:: *****::*: . * ::: * * : :* MMAR_4907|M.marinum_M AAAAIVATGGCQ MUL_0499|M.ulcerans_Agy99 AAAAIVATGGCQ MAV_0726|M.avium_104 AAAVAVALGGR- MSMEG_5840|M.smegmatis_MC2_155 AAAVLVAIGGGQ Mvan_5136|M.vanbaalenii_PYR-1 GAAVVAGFGGIQ MAB_0498c|M.abscessus_ATCC_199 AAAATAACG--- .**. .. *