#Console: python ../../../transit/src/transit.py anova iron_combined_wig4.txt iron_samples_metadata.txt H37Rv.prot_table anova_iron.txt
Rv	Gene	TAs	HighFeMBT	LowFeMBT	FeCMBT	Hemin	Hemoglobin	HeminMBT	pval	padj	status
Rv0001	dnaA	31	0.00	0.00	0.00	0.14	0.15	0.00	0.626418	1.000000	-
Rv0002	dnaN	31	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv0003	recF	35	57.02	54.33	59.56	59.37	52.49	60.84	0.968259	1.000000	-
Rv0004	-	7	12.13	10.14	16.55	11.14	15.59	8.68	0.979599	1.000000	-
Rv0005	gyrB	42	2.25	4.11	3.35	4.79	4.38	5.15	0.893349	1.000000	-
Rv0006	gyrA	45	7.02	5.87	6.40	4.48	2.61	4.34	0.965798	1.000000	-
Rv0007	-	10	142.70	223.20	159.94	217.56	263.46	142.35	0.002092	0.046893	-
Rv0008c	-	4	37.18	34.50	37.59	32.93	30.23	39.16	0.992345	1.000000	-
Rv0009	ppiA	7	128.64	158.13	158.52	196.33	193.99	144.14	0.455567	1.000000	-
Rv0010c	-	10	162.07	185.98	124.85	131.09	148.65	161.36	0.907787	1.000000	-
Rv0011c	-	3	27.45	39.12	11.47	64.56	65.85	38.45	0.036505	0.496107	-
Rv0012	-	16	89.09	136.39	100.65	89.08	83.69	90.40	0.096278	1.000000	-
Rv0013	trpG	15	3.65	3.70	6.04	4.10	5.36	2.07	0.846379	1.000000	-
Rv0014c	pknB	24	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv0015c	pknA	16	12.39	11.13	15.45	12.88	11.62	19.43	0.972914	1.000000	-
Rv0016c	pbpA	37	58.46	80.04	62.65	75.96	97.78	66.92	0.010704	0.192380	-
Rv0017c	rodA	27	83.03	138.41	76.20	142.48	183.51	125.42	0.000001	0.000043	-
Rv0018c	ppp	25	53.83	69.36	56.80	85.73	90.26	76.85	0.178890	1.000000	-
Rv0019c	-	13	215.15	225.38	173.23	286.30	277.75	224.74	0.019050	0.301624	-
Rv0020c	TB39.8	52	22.97	27.93	22.30	30.57	30.25	29.35	0.900058	1.000000	-
Rv0021c	-	22	228.82	226.08	237.31	219.39	218.61	216.90	0.997359	1.000000	-
Rv0022c	whiB5	8	345.17	361.50	382.62	350.30	297.67	288.61	0.938563	1.000000	-
Rv0023	-	12	3.57	9.69	1.58	12.12	18.56	4.73	0.000550	0.014258	-
Rv0024	-	12	374.37	326.67	353.97	285.34	319.58	311.05	0.788406	1.000000	-
Rv0025	-	7	196.53	194.53	178.60	192.68	166.19	162.17	0.956396	1.000000	-
Rv0026	-	14	119.43	120.01	105.08	113.40	107.63	134.35	0.950115	1.000000	-
Rv0027	-	5	40.11	25.43	41.87	33.71	42.79	39.30	0.875406	1.000000	-
Rv0028	-	5	101.36	131.59	103.22	95.80	77.98	118.83	0.827426	1.000000	-
Rv0029	-	18	246.57	235.65	265.96	238.79	244.84	245.10	0.995280	1.000000	-
Rv0030	-	5	209.75	234.41	261.36	215.23	252.62	214.21	0.976591	1.000000	-
Rv0031	-	1	0.00	30.10	15.50	0.00	102.90	51.40	1.000000	1.000000	TA sites <= 1
Rv0032	bioF2	57	104.01	103.39	105.75	108.56	108.44	117.49	0.977353	1.000000	-
Rv0033	acpA	3	51.09	71.38	65.58	62.02	77.63	82.27	0.936309	1.000000	-
Rv0034	-	5	175.39	188.37	147.40	171.29	156.53	178.55	0.971434	1.000000	-
Rv0035	fadD34	25	321.89	311.37	333.87	333.51	303.84	314.54	0.994413	1.000000	-
Rv0036c	-	4	345.19	383.28	327.74	344.25	345.79	332.58	0.968010	1.000000	-
Rv0037c	-	20	223.42	276.10	248.80	362.70	330.77	247.93	0.223176	1.000000	-
Rv0038	-	7	222.06	220.60	226.03	181.15	218.78	208.94	0.974683	1.000000	-
Rv0039c	-	4	635.48	474.63	550.26	498.62	415.55	420.63	0.907785	1.000000	-
Rv0040c	mtc28	9	182.43	196.36	142.67	186.58	194.02	169.97	0.963538	1.000000	-
Rv0041	leuS	72	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv0042c	-	5	58.92	70.26	75.34	51.54	46.54	70.42	0.515640	1.000000	-
Rv0043c	-	10	109.79	121.11	88.21	91.52	72.63	102.88	0.094156	1.000000	-
Rv0044c	-	20	117.41	126.47	129.00	130.35	126.56	126.98	0.995257	1.000000	-
Rv0045c	-	7	286.36	312.72	319.03	330.18	329.67	375.16	0.934219	1.000000	-
Rv0046c	ino1	16	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv0047c	-	7	106.44	119.48	115.68	161.95	152.91	123.13	0.704186	1.000000	-
Rv0048c	-	16	143.83	131.49	123.87	136.13	148.82	157.88	0.984593	1.000000	-
Rv0049	-	8	147.20	267.78	180.42	314.15	365.00	222.32	0.011159	0.197221	-
Rv0050	ponA1	37	39.40	62.19	44.86	57.52	68.78	51.91	0.042852	0.560587	-
Rv0051	-	34	114.53	103.10	117.20	116.67	118.41	102.47	0.922637	1.000000	-
Rv0052	-	7	162.41	108.48	131.33	150.58	106.97	128.31	0.810386	1.000000	-
Rv0053	rpsF	6	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv0054	ssb	5	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv0055	rpsR	4	15.52	21.76	19.50	27.44	39.71	22.08	0.929315	1.000000	-
Rv0056	rplI	7	152.26	153.32	116.25	93.35	103.71	153.23	0.534896	1.000000	-
Rv0057	-	15	45.70	51.34	64.38	60.85	66.78	59.08	0.525640	1.000000	-
Rv0058	dnaB	39	0.00	0.00	0.00	0.00	0.12	0.00	0.306755	1.000000	-
Rv0059	-	20	169.56	132.79	170.63	150.67	155.80	130.92	0.687737	1.000000	-
Rv0060	-	23	12.58	15.73	13.99	13.25	18.48	11.60	0.996254	1.000000	-
Rv0061	-	6	72.02	72.98	114.96	76.15	80.16	69.34	0.666333	1.000000	-
Rv0062	celA1	21	242.88	243.43	227.47	257.52	230.26	224.15	0.915924	1.000000	-
Rv0063	-	23	103.67	98.71	108.20	95.44	96.86	100.91	0.992321	1.000000	-
Rv0064	-	68	80.41	70.74	89.77	75.67	66.24	75.35	0.300347	1.000000	-
Rv0065	-	8	114.01	153.59	148.14	145.07	156.28	150.32	0.852004	1.000000	-
Rv0066c	icd2	38	61.82	89.04	55.18	111.94	114.45	82.57	0.000002	0.000073	-
Rv0067c	-	12	96.22	141.20	101.60	131.59	146.68	112.69	0.069266	0.812855	-
Rv0068	-	12	212.02	181.95	176.29	179.58	187.21	184.41	0.995551	1.000000	-
Rv0069c	sdaA	12	71.12	68.65	67.19	55.51	75.24	64.21	0.807356	1.000000	-
Rv0070c	glyA2	18	163.97	169.26	179.21	164.52	156.25	133.96	0.924617	1.000000	-
Rv0071	-	8	139.71	151.47	175.91	149.69	137.58	218.21	0.621477	1.000000	-
Rv0072	-	16	249.29	289.54	249.03	259.78	270.98	275.51	0.962199	1.000000	-
Rv0073	-	15	254.41	244.74	208.60	205.15	210.81	225.40	0.707864	1.000000	-
Rv0074	-	19	134.08	134.32	134.46	129.30	133.43	141.80	0.998840	1.000000	-
Rv0075	-	24	176.33	171.83	176.58	182.15	162.16	164.99	0.996862	1.000000	-
Rv0076c	-	3	171.89	191.86	158.68	169.08	244.57	261.78	0.414545	1.000000	-
Rv0077c	-	14	128.67	101.15	127.30	126.17	109.20	107.13	0.778710	1.000000	-
Rv0078	-	8	95.41	92.99	68.10	75.16	78.52	76.40	0.893964	1.000000	-
Rv0078A	-	10	117.61	125.50	116.29	122.83	108.13	132.20	0.990574	1.000000	-
Rv0079	-	14	289.56	246.20	250.15	259.54	244.27	224.16	0.750810	1.000000	-
Rv0080	-	4	46.15	44.59	42.31	52.13	29.09	65.14	0.422240	1.000000	-
Rv0081	-	5	93.20	91.37	117.00	71.74	121.99	97.56	0.821339	1.000000	-
Rv0082	-	7	115.31	121.51	122.80	123.71	109.58	100.90	0.995151	1.000000	-
Rv0083	-	23	257.39	237.03	251.35	247.87	252.27	211.77	0.835913	1.000000	-
Rv0084	hycD	9	170.38	172.84	176.68	169.43	176.71	169.90	0.999978	1.000000	-
Rv0085	hycP	4	82.20	94.39	112.08	112.04	107.15	128.77	0.753996	1.000000	-
Rv0086	hycQ	15	106.00	111.48	117.07	113.34	101.98	101.39	0.966344	1.000000	-
Rv0087	hycE	25	116.56	80.09	104.83	76.46	92.04	77.80	0.628889	1.000000	-
Rv0088	-	14	94.72	76.32	79.30	77.77	74.05	60.92	0.719153	1.000000	-
Rv0089	-	10	188.68	176.73	218.71	173.41	190.04	130.76	0.628854	1.000000	-
Rv0090	-	12	219.88	163.38	193.58	215.14	188.78	161.41	0.806809	1.000000	-
Rv0091	mtn	11	203.75	177.74	190.15	193.96	166.34	167.05	0.975259	1.000000	-
Rv0092	ctpA	30	177.00	164.91	159.88	150.27	131.30	162.09	0.695687	1.000000	-
Rv0093c	-	8	238.18	205.08	239.40	201.15	206.05	200.79	0.933376	1.000000	-
Rv0094c	-	14	194.24	194.17	209.93	200.16	187.73	213.13	0.994424	1.000000	-
Rv0095c	-	9	36.18	46.90	53.53	42.00	41.93	61.15	0.764927	1.000000	-
Rv0096	PPE1	34	235.32	232.21	253.12	254.01	225.20	231.64	0.965515	1.000000	-
Rv0097	-	26	52.58	58.85	55.85	54.55	55.99	65.64	0.930459	1.000000	-
Rv0098	-	11	67.50	93.07	54.39	63.36	57.45	65.28	0.407126	1.000000	-
Rv0099	fadD10	32	42.44	46.62	53.29	41.81	40.98	37.10	0.777293	1.000000	-
Rv0100	-	3	46.54	40.57	34.42	40.73	63.77	60.92	0.478739	1.000000	-
Rv0101	nrp	122	118.24	99.72	114.84	111.86	101.94	108.40	0.436985	1.000000	-
Rv0102	-	42	8.33	11.06	4.33	5.11	4.43	9.57	0.048654	0.616288	-
Rv0103c	ctpB	30	190.36	179.94	199.51	195.40	184.18	162.47	0.980465	1.000000	-
Rv0104	-	27	254.17	256.69	244.82	236.72	235.17	235.92	0.964590	1.000000	-
Rv0105c	rpmB	5	206.56	196.40	180.84	138.82	143.97	143.74	0.810302	1.000000	-
Rv0106	-	12	146.84	129.29	127.65	116.39	116.93	121.39	0.883345	1.000000	-
Rv0107c	ctpI	65	141.05	129.62	137.69	134.85	134.59	121.48	0.928033	1.000000	-
Rv0108c	-	2	16.88	18.02	26.67	26.15	22.98	34.38	0.853281	1.000000	-
Rv0109	PE_PGRS1	27	94.63	61.61	79.72	81.09	82.06	74.47	0.764633	1.000000	-
Rv0110	-	13	342.87	328.09	346.58	339.84	300.50	300.45	0.955261	1.000000	-
Rv0111	-	42	154.27	147.87	146.33	134.13	152.54	148.07	0.948802	1.000000	-
Rv0112	gca	31	1.46	2.30	1.52	1.85	3.00	2.76	0.683104	1.000000	-
Rv0113	gmhA	12	68.56	65.42	59.64	39.03	67.32	62.30	0.158115	1.000000	-
Rv0114	gmhB	9	180.50	178.49	150.50	146.66	149.98	178.26	0.967213	1.000000	-
Rv0115	hddA	18	155.45	134.00	126.55	144.60	143.40	152.98	0.886468	1.000000	-
Rv0116c	-	17	108.79	110.72	107.21	95.70	108.30	121.08	0.855790	1.000000	-
Rv0117	oxyS	17	71.50	70.93	83.53	66.71	73.84	87.44	0.876886	1.000000	-
Rv0118c	oxcA	26	146.07	138.37	150.56	140.57	114.96	111.03	0.674846	1.000000	-
Rv0119	fadD7	13	49.61	58.06	45.88	56.01	56.07	36.91	0.822448	1.000000	-
Rv0120c	fusA2	27	48.64	45.08	57.67	48.84	47.29	49.30	0.868662	1.000000	-
Rv0121c	-	10	152.62	155.41	140.62	134.33	136.79	123.73	0.995235	1.000000	-
Rv0122	-	9	46.47	35.61	57.28	43.44	50.12	73.66	0.470581	1.000000	-
Rv0123	-	8	57.02	72.21	78.14	59.45	51.64	46.23	0.908427	1.000000	-
Rv0124	PE_PGRS2	13	228.96	243.68	237.23	222.19	206.16	205.17	0.978914	1.000000	-
Rv0125	pepA	10	175.46	167.87	188.21	146.56	139.62	166.14	0.897445	1.000000	-
Rv0126	treS	31	136.11	187.98	122.63	173.94	187.13	133.51	0.012694	0.219263	-
Rv0127	-	30	74.25	104.68	64.77	102.53	103.81	101.99	0.002364	0.051821	-
Rv0128	-	19	267.75	237.99	257.15	246.42	242.91	255.90	0.979798	1.000000	-
Rv0129c	fbpC	28	53.67	78.33	61.69	63.30	103.40	67.71	0.040686	0.537538	-
Rv0130	-	4	73.55	75.36	95.50	97.99	99.66	112.02	0.655444	1.000000	-
Rv0131c	fadE1	18	142.41	162.87	162.68	163.89	160.45	153.90	0.958699	1.000000	-
Rv0132c	fgd2	15	176.13	182.35	180.64	193.54	162.05	186.32	0.976602	1.000000	-
Rv0133	-	7	223.57	191.42	187.28	226.53	214.60	195.32	0.978942	1.000000	-
Rv0134	ephF	12	246.58	242.78	259.50	218.90	230.21	222.73	0.977065	1.000000	-
Rv0135c	-	11	267.14	169.04	214.75	103.46	122.54	157.53	0.003158	0.066321	-
Rv0136	cyp138	23	174.58	177.71	183.93	170.56	178.82	176.76	0.999400	1.000000	-
Rv0137c	msrA	11	60.58	64.71	67.09	52.85	74.43	75.66	0.848127	1.000000	-
Rv0138	-	6	591.04	549.24	541.82	532.41	491.37	495.14	0.972186	1.000000	-
Rv0139	-	12	411.93	361.39	398.78	406.72	362.65	336.73	0.968001	1.000000	-
Rv0140	-	15	123.43	115.57	118.56	114.46	119.56	127.06	0.998320	1.000000	-
Rv0141c	-	9	168.69	184.16	185.24	170.56	168.25	158.38	0.992118	1.000000	-
Rv0142	-	6	372.82	323.70	300.98	305.54	315.91	220.57	0.812826	1.000000	-
Rv0143c	-	27	195.67	166.97	186.68	161.41	184.97	186.40	0.822264	1.000000	-
Rv0144	-	14	112.41	131.01	95.86	107.53	98.03	118.84	0.941713	1.000000	-
Rv0145	-	15	302.32	262.64	239.32	258.48	230.04	237.10	0.875293	1.000000	-
Rv0146	-	16	375.72	363.50	330.56	319.05	321.67	319.02	0.940522	1.000000	-
Rv0147	-	26	282.41	271.36	257.55	253.00	263.81	283.82	0.970320	1.000000	-
Rv0148	-	16	274.87	285.14	243.08	248.93	228.99	245.20	0.866971	1.000000	-
Rv0149	-	21	167.52	170.58	173.33	166.37	159.63	166.15	0.999536	1.000000	-
Rv0150c	-	4	11.80	23.00	21.24	13.76	18.49	28.39	0.699865	1.000000	-
Rv0151c	PE1	44	120.88	129.72	109.52	112.74	121.08	137.46	0.527576	1.000000	-
Rv0152c	PE2	40	154.12	153.56	151.21	156.00	152.62	170.38	0.986796	1.000000	-
Rv0153c	ptbB	11	114.11	177.32	78.42	214.06	194.67	141.89	0.000820	0.020326	-
Rv0154c	fadE2	12	129.07	160.20	120.42	164.47	183.00	163.49	0.699461	1.000000	-
Rv0155	pntAa	10	392.77	395.84	402.52	425.08	407.06	303.00	0.902869	1.000000	-
Rv0156	pntAb	1	164.54	209.40	236.79	192.44	191.30	352.06	1.000000	1.000000	TA sites <= 1
Rv0157	pntB	14	272.44	288.97	268.18	262.05	282.87	312.57	0.964584	1.000000	-
Rv0158	-	16	243.01	267.86	207.85	233.51	226.09	274.76	0.690559	1.000000	-
Rv0159c	PE3	50	226.21	226.65	234.43	208.73	206.81	218.87	0.966298	1.000000	-
Rv0160c	PE4	42	174.99	164.11	161.27	165.90	163.00	179.83	0.980670	1.000000	-
Rv0161	-	19	116.28	102.45	103.58	111.11	116.32	101.93	0.987708	1.000000	-
Rv0162c	adhE1	16	102.63	130.41	143.77	121.79	115.31	140.68	0.890799	1.000000	-
Rv0163	-	10	168.59	152.15	162.07	156.37	171.39	176.41	0.994327	1.000000	-
Rv0164	TB18.5	8	54.73	50.94	55.27	51.10	58.22	70.93	0.999245	1.000000	-
Rv0165c	-	8	146.11	115.60	131.68	145.36	153.88	103.24	0.810603	1.000000	-
Rv0166	fadD5	27	187.26	182.55	175.70	175.27	168.27	173.15	0.994702	1.000000	-
Rv0167	yrbE1A	7	137.80	136.01	98.15	121.49	89.96	153.78	0.574074	1.000000	-
Rv0168	yrbE1B	14	103.18	117.20	71.68	113.89	100.35	120.81	0.433841	1.000000	-
Rv0169	mce1A	39	82.75	107.92	76.33	99.93	92.91	118.05	0.102040	1.000000	-
Rv0170	mce1B	18	176.04	215.33	159.81	162.32	185.32	237.40	0.273228	1.000000	-
Rv0171	mce1C	25	177.82	242.63	152.86	185.91	214.54	230.02	0.025922	0.376412	-
Rv0172	mce1D	33	91.27	119.84	85.82	99.71	105.42	133.84	0.089516	0.986655	-
Rv0173	lprK	16	196.95	211.21	172.32	205.85	196.99	245.79	0.799593	1.000000	-
Rv0174	mce1F	31	128.89	197.66	120.97	148.00	162.21	198.08	0.009741	0.179932	-
Rv0175	-	9	173.43	225.01	119.35	169.57	194.14	219.84	0.514232	1.000000	-
Rv0176	-	15	219.08	265.70	202.35	244.19	242.67	281.13	0.730014	1.000000	-
Rv0177	-	12	43.28	53.96	35.22	39.49	43.01	55.54	0.891161	1.000000	-
Rv0178	-	11	150.76	130.49	85.40	107.65	135.52	132.94	0.756536	1.000000	-
Rv0179c	lprO	22	225.35	185.40	205.01	198.39	188.22	191.06	0.893972	1.000000	-
Rv0180c	-	28	40.02	42.02	36.56	40.04	48.10	43.98	0.937404	1.000000	-
Rv0181c	-	15	135.03	149.16	140.64	142.92	141.62	140.65	0.998407	1.000000	-
Rv0182c	sigG	21	191.75	192.61	176.97	164.57	174.47	181.90	0.948530	1.000000	-
Rv0183	-	15	293.74	269.12	268.44	253.42	222.65	258.63	0.654891	1.000000	-
Rv0184	-	11	199.79	227.73	204.52	242.61	223.04	221.54	0.989680	1.000000	-
Rv0185	-	10	118.96	127.17	115.39	110.36	124.55	128.71	0.996254	1.000000	-
Rv0186	bglS	34	114.56	115.94	124.40	105.78	106.95	120.74	0.885389	1.000000	-
Rv0187	-	7	315.94	334.12	315.74	280.08	246.07	222.57	0.742880	1.000000	-
Rv0188	-	10	234.17	167.01	183.39	178.50	188.35	191.45	0.980379	1.000000	-
Rv0189c	ilvD	22	8.60	3.75	8.73	1.90	0.00	10.06	0.060902	0.740847	-
Rv0190	-	3	504.02	654.06	406.15	681.90	450.07	536.80	0.826380	1.000000	-
Rv0191	-	19	454.89	400.59	424.32	394.10	401.46	382.72	0.936015	1.000000	-
Rv0192	-	13	263.59	258.72	284.96	224.71	270.88	280.90	0.784356	1.000000	-
Rv0192A	-	2	321.33	250.22	332.31	282.17	256.25	298.91	0.384284	1.000000	-
Rv0193c	-	34	233.53	252.45	238.85	240.84	243.88	253.07	0.982633	1.000000	-
Rv0194	-	55	336.93	338.85	339.25	322.15	304.48	314.98	0.897758	1.000000	-
Rv0195	-	6	416.82	400.37	378.41	360.09	367.39	384.39	0.999772	1.000000	-
Rv0196	-	7	254.84	250.14	213.81	222.77	222.00	234.54	0.973904	1.000000	-
Rv0197	-	33	144.68	117.55	145.70	115.89	120.18	114.99	0.098061	1.000000	-
Rv0198c	-	42	70.23	62.01	65.93	66.25	71.88	76.07	0.834264	1.000000	-
Rv0199	-	12	17.16	19.49	14.62	32.13	23.39	25.44	0.640783	1.000000	-
Rv0200	-	7	105.26	134.32	90.38	209.31	179.50	116.58	0.296511	1.000000	-
Rv0201c	-	8	100.63	144.70	110.97	131.57	121.35	150.21	0.306507	1.000000	-
Rv0202c	mmpL11	39	10.07	18.39	60.52	160.86	168.46	13.10	0.000000	0.000000	-
Rv0203	-	3	327.99	377.08	384.81	310.70	320.24	348.50	0.861832	1.000000	-
Rv0204c	-	19	92.86	156.61	139.02	127.57	173.23	108.23	0.050670	0.635771	-
Rv0205	-	12	238.80	196.81	199.38	203.46	205.28	237.63	0.902913	1.000000	-
Rv0206c	mmpL3	34	5.52	4.65	2.67	6.79	8.36	3.93	0.690868	1.000000	-
Rv0207c	-	9	96.93	129.10	85.59	139.15	109.66	94.73	0.911208	1.000000	-
Rv0208c	trmB	12	109.05	106.49	91.28	88.23	85.03	100.50	0.945325	1.000000	-
Rv0209	-	15	224.46	234.97	245.95	252.02	208.04	218.12	0.952082	1.000000	-
Rv0210	-	13	500.24	466.79	465.07	457.72	485.17	454.41	0.998464	1.000000	-
Rv0211	pckA	24	90.82	127.54	68.72	194.68	224.87	115.58	0.000168	0.004709	-
Rv0212c	nadR	6	135.70	146.66	123.70	132.52	134.13	119.65	0.988205	1.000000	-
Rv0213c	-	31	98.98	101.76	84.79	94.22	95.48	106.91	0.953336	1.000000	-
Rv0214	fadD4	34	139.40	128.49	119.59	125.98	132.24	138.17	0.871414	1.000000	-
Rv0215c	fadE3	18	136.44	128.63	137.41	142.71	140.59	149.93	0.998538	1.000000	-
Rv0216	-	23	85.20	79.41	70.87	65.72	73.17	64.76	0.783290	1.000000	-
Rv0217c	lipW	21	194.97	197.47	182.64	175.18	167.13	166.42	0.906025	1.000000	-
Rv0218	-	19	96.73	69.36	72.80	68.72	64.95	76.23	0.305697	1.000000	-
Rv0219	-	11	203.60	150.58	163.18	147.27	156.44	159.06	0.477727	1.000000	-
Rv0220	lipC	24	94.42	110.87	107.86	114.50	91.42	107.36	0.716370	1.000000	-
Rv0221	-	28	160.36	139.44	162.36	138.48	137.01	146.95	0.760453	1.000000	-
Rv0222	echA1	8	72.62	67.92	85.24	69.22	72.19	75.98	0.974006	1.000000	-
Rv0223c	-	25	73.34	81.44	69.76	65.73	66.96	72.05	0.909920	1.000000	-
Rv0224c	-	15	0.00	0.00	0.00	0.29	0.00	0.00	0.602744	1.000000	-
Rv0225	-	20	0.00	0.00	0.77	0.00	0.00	0.00	0.307267	1.000000	-
Rv0226c	-	29	37.83	29.04	30.06	33.91	27.28	23.24	0.996848	1.000000	-
Rv0227c	-	23	0.00	0.00	0.00	0.00	0.63	0.00	0.032985	0.460172	-
Rv0228	-	14	4.30	4.00	6.88	4.96	1.36	3.51	0.924274	1.000000	-
Rv0229c	-	16	108.69	101.04	86.92	95.71	95.41	121.13	0.876810	1.000000	-
Rv0230c	php	16	304.66	301.76	289.67	275.12	280.61	296.45	0.996902	1.000000	-
Rv0231	fadE4	36	146.20	165.63	149.85	145.50	155.33	159.51	0.869851	1.000000	-
Rv0232	-	9	346.93	323.82	344.07	317.80	318.52	314.21	0.997059	1.000000	-
Rv0233	nrdB	11	158.42	149.69	156.45	157.94	172.89	174.64	0.990538	1.000000	-
Rv0234c	gabD1	23	78.74	86.70	75.33	73.82	71.41	70.31	0.952490	1.000000	-
Rv0235c	-	27	53.69	53.89	64.53	48.27	57.41	54.29	0.526826	1.000000	-
Rv0236c	-	39	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv0236A	-	3	0.00	3.40	0.00	0.00	0.00	0.00	0.020354	0.317242	-
Rv0237	lpqI	13	175.06	173.41	146.85	170.08	147.62	143.07	0.946901	1.000000	-
Rv0238	-	13	107.48	123.74	89.35	317.04	322.77	152.92	0.000000	0.000002	-
Rv0239	-	2	139.34	117.27	147.10	129.89	120.90	134.21	0.995838	1.000000	-
Rv0240	-	9	170.13	206.94	226.90	196.09	197.19	214.54	0.786175	1.000000	-
Rv0241c	-	16	65.92	95.42	72.90	63.00	75.91	64.88	0.833606	1.000000	-
Rv0242c	fabG	11	45.88	83.42	75.34	58.28	59.72	48.41	0.254077	1.000000	-
Rv0243	fadA2	20	87.36	95.39	101.80	59.02	75.86	66.07	0.097349	1.000000	-
Rv0244c	fadE5	23	271.80	234.95	229.09	195.08	201.72	228.95	0.675896	1.000000	-
Rv0245	-	4	124.36	253.55	103.23	139.68	162.45	215.86	0.216508	1.000000	-
Rv0246	-	33	78.59	77.01	81.09	71.74	65.63	83.86	0.922229	1.000000	-
Rv0247c	-	12	55.26	53.43	58.59	44.74	45.63	51.53	0.893516	1.000000	-
Rv0248c	sdhA	39	130.08	114.96	112.76	112.69	107.09	116.33	0.737316	1.000000	-
Rv0249c	-	23	96.33	93.25	89.59	80.07	74.58	89.87	0.645954	1.000000	-
Rv0250c	-	4	72.73	78.69	51.61	73.50	78.79	108.09	0.532771	1.000000	-
Rv0251c	hsp	5	447.03	323.13	365.53	349.49	316.69	319.00	0.966819	1.000000	-
Rv0252	nirB	41	126.74	129.52	135.81	136.27	136.86	116.22	0.869565	1.000000	-
Rv0253	nirD	7	85.42	65.33	66.44	82.75	59.83	81.11	0.852392	1.000000	-
Rv0254c	cobU	6	240.28	231.25	281.27	224.00	252.69	252.72	0.960051	1.000000	-
Rv0255c	cobQ1	15	220.21	190.73	197.39	206.62	197.75	175.91	0.953494	1.000000	-
Rv0256c	PPE2	32	135.70	135.51	148.95	221.33	199.93	124.63	0.011171	0.197221	-
Rv0257	-	3	276.41	303.16	257.09	297.92	289.97	205.16	0.835689	1.000000	-
Rv0258c	-	8	61.09	51.67	54.62	33.79	61.57	64.32	0.685069	1.000000	-
Rv0259c	-	8	108.17	111.47	71.18	81.28	97.79	92.80	0.641343	1.000000	-
Rv0260c	-	22	100.89	112.30	101.14	100.31	87.53	92.58	0.956727	1.000000	-
Rv0261c	narK3	25	115.50	93.04	116.24	100.46	101.45	102.01	0.655341	1.000000	-
Rv0262c	aac	7	136.58	130.93	142.71	150.09	133.11	127.50	0.951037	1.000000	-
Rv0263c	-	16	72.76	92.77	80.33	59.82	75.94	82.56	0.662861	1.000000	-
Rv0264c	-	10	197.79	175.77	198.77	159.80	185.90	159.64	0.615480	1.000000	-
Rv0265c	-	9	169.37	194.83	143.05	179.35	178.02	177.01	0.916165	1.000000	-
Rv0266c	oplA	42	269.77	252.52	252.24	237.04	236.92	241.40	0.888598	1.000000	-
Rv0267	narU	15	193.09	191.68	178.30	173.34	186.33	208.04	0.955879	1.000000	-
Rv0268c	-	13	339.87	333.57	325.37	337.60	315.80	335.96	0.998725	1.000000	-
Rv0269c	-	11	300.25	297.47	258.84	247.22	249.43	256.19	0.954321	1.000000	-
Rv0270	fadD2	25	302.29	162.58	303.61	82.28	143.95	118.49	0.000000	0.000000	-
Rv0271c	fadE6	34	192.14	203.63	199.40	198.94	196.97	198.85	0.998932	1.000000	-
Rv0272c	-	16	73.38	84.05	81.86	73.85	72.24	83.55	0.983048	1.000000	-
Rv0273c	-	17	145.70	130.28	123.90	118.06	130.77	128.26	0.971357	1.000000	-
Rv0274	-	8	83.85	81.98	76.27	78.02	69.76	75.63	0.996557	1.000000	-
Rv0275c	-	9	96.32	108.53	116.17	110.10	95.57	113.02	0.979683	1.000000	-
Rv0276	-	17	161.75	163.54	141.01	165.70	173.28	189.51	0.780062	1.000000	-
Rv0277c	-	6	144.62	120.67	122.74	124.57	127.83	127.86	0.995858	1.000000	-
Rv0278c	PE_PGRS3	26	291.76	276.46	284.53	271.87	236.92	240.40	0.868461	1.000000	-
Rv0279c	PE_PGRS4	19	330.25	289.38	326.24	272.73	255.16	272.18	0.529086	1.000000	-
Rv0280	PPE3	26	119.43	259.75	119.86	322.77	299.29	230.20	0.000002	0.000082	-
Rv0281	-	14	382.59	405.00	392.13	390.74	367.18	395.62	0.996911	1.000000	-
Rv0282	-	24	2.33	1.27	0.52	0.20	0.00	4.40	0.000884	0.021641	-
Rv0283	-	24	1.09	0.21	0.00	0.00	0.38	1.29	0.082503	0.920631	-
Rv0284	-	61	0.57	0.00	0.00	0.08	0.00	1.61	0.000004	0.000173	-
Rv0285	PE5	5	0.00	0.00	0.00	0.00	0.00	2.02	0.026986	0.385930	-
Rv0286	PPE4	31	9.10	2.30	2.83	45.85	54.47	40.15	0.000000	0.000010	-
Rv0287	esxG	5	16.43	8.20	12.50	0.00	0.00	2.96	0.210072	1.000000	-
Rv0288	esxH	7	1.08	0.00	0.00	0.00	0.00	2.69	0.125741	1.000000	-
Rv0289	-	13	3.58	4.74	0.00	0.00	0.00	7.56	0.001869	0.042864	-
Rv0290	-	19	1.55	0.26	0.00	0.00	0.00	5.88	0.000010	0.000363	-
Rv0291	mycP3	13	32.06	3.19	1.68	0.38	0.69	25.69	0.000000	0.000006	-
Rv0292	-	17	20.63	5.41	4.59	3.61	4.73	17.32	0.002823	0.060555	-
Rv0293c	-	27	202.05	238.20	189.34	240.26	191.92	224.89	0.769561	1.000000	-
Rv0294	tam	14	170.86	225.18	193.70	210.41	224.16	203.72	0.912764	1.000000	-
Rv0295c	-	10	233.04	212.44	225.96	205.87	191.16	262.69	0.927587	1.000000	-
Rv0296c	-	42	152.95	145.14	142.26	157.22	151.84	153.00	0.993104	1.000000	-
Rv0297	PE_PGRS5	14	253.52	227.47	248.70	231.98	213.36	216.60	0.986932	1.000000	-
Rv0298	-	5	327.07	312.66	288.59	341.87	326.45	272.43	0.989381	1.000000	-
Rv0299	-	2	616.56	700.64	595.23	494.88	438.58	343.29	0.736716	1.000000	-
Rv0300	-	5	315.49	372.16	346.05	326.56	305.20	330.42	0.989586	1.000000	-
Rv0301	-	7	403.44	401.04	369.07	352.76	349.84	365.66	0.979799	1.000000	-
Rv0302	-	8	250.89	261.13	274.40	223.88	242.47	243.23	0.943669	1.000000	-
Rv0303	-	12	252.08	257.47	209.89	233.59	268.53	267.37	0.759779	1.000000	-
Rv0304c	PPE5	136	90.74	95.04	83.55	92.18	98.83	104.15	0.545754	1.000000	-
Rv0305c	PPE6	60	61.43	66.74	62.89	71.61	70.11	74.40	0.829248	1.000000	-
Rv0306	-	8	334.99	289.90	330.96	327.48	306.95	322.51	0.998871	1.000000	-
Rv0307c	-	9	191.04	204.22	195.29	156.29	173.59	203.10	0.865505	1.000000	-
Rv0308	-	15	142.72	174.64	164.80	155.30	164.79	175.85	0.901774	1.000000	-
Rv0309	-	12	102.63	122.04	123.20	108.55	121.23	121.30	0.962672	1.000000	-
Rv0310c	-	12	76.78	67.89	86.68	73.42	85.29	82.44	0.956234	1.000000	-
Rv0311	-	17	91.15	102.07	77.58	85.77	88.25	93.91	0.948045	1.000000	-
Rv0312	-	22	32.96	36.27	46.33	48.18	31.83	37.97	0.639969	1.000000	-
Rv0313	-	5	511.62	531.54	463.23	508.47	510.56	521.42	0.999209	1.000000	-
Rv0314c	-	7	397.39	341.30	297.55	326.70	265.37	329.32	0.740204	1.000000	-
Rv0315	-	10	228.63	243.52	237.42	262.41	235.30	223.54	0.998897	1.000000	-
Rv0316	-	8	380.51	293.90	309.60	264.61	288.15	252.75	0.899789	1.000000	-
Rv0317c	glpQ2	13	388.45	335.52	370.98	352.82	337.34	328.79	0.977201	1.000000	-
Rv0318c	-	8	281.03	298.06	259.43	272.62	273.56	285.90	0.998831	1.000000	-
Rv0319	pcp	8	216.08	212.43	170.34	222.14	181.97	223.96	0.967482	1.000000	-
Rv0320	-	16	186.75	183.79	168.13	167.01	185.91	194.38	0.974314	1.000000	-
Rv0321	dcd	6	198.20	236.41	190.85	198.64	172.31	161.40	0.922320	1.000000	-
Rv0322	udgA	24	126.89	128.94	117.94	129.14	135.79	136.25	0.987973	1.000000	-
Rv0323c	-	12	245.67	236.64	228.52	197.63	224.39	191.92	0.920387	1.000000	-
Rv0324	-	12	262.55	254.00	263.22	282.20	278.74	227.73	0.943383	1.000000	-
Rv0325	-	6	240.64	186.97	234.93	203.81	206.50	210.33	0.974604	1.000000	-
Rv0326	-	9	151.15	150.06	168.78	164.47	175.45	156.59	0.997482	1.000000	-
Rv0327c	cyp135A1	24	48.90	52.04	52.82	52.54	58.31	59.92	0.970624	1.000000	-
Rv0328	-	11	251.38	223.20	216.82	177.46	174.49	188.64	0.726283	1.000000	-
Rv0329c	-	9	219.79	244.59	217.09	219.07	190.66	217.48	0.994349	1.000000	-
Rv0330c	-	9	307.76	307.42	295.52	302.12	295.63	316.96	0.999967	1.000000	-
Rv0331	-	18	147.17	139.20	127.50	138.55	132.56	130.43	0.993632	1.000000	-
Rv0332	-	12	251.28	251.23	246.21	232.83	257.88	238.02	0.998222	1.000000	-
Rv0333	-	4	194.33	189.51	184.66	222.55	184.09	183.01	0.998321	1.000000	-
Rv0334	rmlA	19	0.00	0.00	0.82	0.26	0.24	0.25	0.612630	1.000000	-
Rv0335c	PE6	2	44.25	63.57	62.52	44.62	67.20	28.05	0.857999	1.000000	-
Rv0336	-	18	321.72	310.74	322.01	328.99	310.83	297.61	0.998820	1.000000	-
Rv0337c	aspC	22	102.17	111.24	84.66	119.52	109.10	113.90	0.801668	1.000000	-
Rv0338c	-	37	30.23	6.60	32.88	1.15	0.76	12.04	0.000003	0.000121	-
Rv0339c	-	30	134.67	163.52	156.29	153.10	165.05	150.11	0.888385	1.000000	-
Rv0340	-	5	42.98	49.94	44.97	59.37	85.91	59.69	0.769834	1.000000	-
Rv0341	iniB	19	124.03	133.30	153.22	123.47	110.08	127.84	0.751467	1.000000	-
Rv0342	iniA	27	133.85	170.26	140.40	157.57	155.25	162.60	0.834178	1.000000	-
Rv0343	iniC	13	209.67	164.71	181.87	165.81	197.43	159.48	0.830220	1.000000	-
Rv0344c	lpqJ	12	236.29	207.95	186.86	190.81	182.71	202.82	0.811448	1.000000	-
Rv0345	-	7	317.49	239.61	252.73	249.45	239.63	268.40	0.799357	1.000000	-
Rv0346c	ansP2	29	200.50	129.29	183.20	89.80	108.37	116.46	0.000000	0.000001	-
Rv0347	-	18	40.38	41.70	38.71	27.49	29.03	27.86	0.986595	1.000000	-
Rv0348	-	18	23.36	39.61	19.82	27.42	29.14	27.45	0.381493	1.000000	-
Rv0349	-	8	180.09	155.13	135.20	127.54	142.53	187.53	0.418187	1.000000	-
Rv0350	dnaK	17	0.99	0.89	0.37	0.29	0.43	0.59	0.844421	1.000000	-
Rv0351	grpE	9	6.19	15.21	10.45	7.52	9.33	8.80	0.951147	1.000000	-
Rv0352	dnaJ1	14	53.81	94.10	44.70	83.48	89.50	61.28	0.066040	0.786571	-
Rv0353	hspR	6	523.08	411.73	514.75	687.55	589.04	390.44	0.347441	1.000000	-
Rv0354c	PPE7	5	44.49	49.91	45.22	37.52	55.43	67.37	0.405497	1.000000	-
Rv0355c	PPE8	172	74.56	83.20	71.96	78.06	78.87	82.95	0.868223	1.000000	-
Rv0356c	-	9	146.79	213.49	190.53	169.50	167.56	192.99	0.714331	1.000000	-
Rv0357c	purA	24	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv0358	-	13	46.07	57.00	55.94	18.74	21.37	36.77	0.000042	0.001377	-
Rv0359	-	11	363.88	354.64	419.71	353.83	383.37	387.32	0.975683	1.000000	-
Rv0360c	-	9	507.53	411.13	441.56	415.17	415.47	366.47	0.854740	1.000000	-
Rv0361	-	8	149.98	196.98	141.38	199.59	211.16	191.87	0.606261	1.000000	-
Rv0362	mgtE	16	459.01	360.62	383.25	367.44	331.95	336.73	0.771085	1.000000	-
Rv0363c	fba	17	14.50	16.12	19.03	14.55	26.01	13.42	0.244920	1.000000	-
Rv0364	-	13	7.26	12.48	7.72	10.11	3.96	8.15	0.901710	1.000000	-
Rv0365c	-	20	394.55	386.68	349.47	391.57	369.85	367.23	0.987227	1.000000	-
Rv0366c	-	6	236.20	266.05	314.36	259.09	240.94	277.39	0.864887	1.000000	-
Rv0367c	-	2	103.12	119.55	112.07	109.50	105.05	47.23	0.510702	1.000000	-
Rv0368c	-	17	312.37	334.17	334.92	293.09	289.01	310.58	0.906376	1.000000	-
Rv0369c	-	7	107.85	68.07	87.18	95.37	95.82	74.91	0.551677	1.000000	-
Rv0370c	-	21	80.65	60.05	63.39	51.29	48.76	46.84	0.162776	1.000000	-
Rv0371c	-	7	80.12	63.33	71.03	50.53	65.09	55.00	0.785627	1.000000	-
Rv0372c	-	6	103.30	65.61	109.45	122.74	97.29	90.85	0.835463	1.000000	-
Rv0373c	-	38	95.76	97.66	109.70	103.34	91.33	104.42	0.862471	1.000000	-
Rv0374c	-	6	71.00	88.49	104.56	93.76	104.49	85.46	0.748789	1.000000	-
Rv0375c	-	8	104.80	73.26	134.54	113.52	104.93	105.27	0.956476	1.000000	-
Rv0376c	-	21	106.11	94.77	143.31	95.52	102.42	126.86	0.361714	1.000000	-
Rv0377	-	9	116.28	130.62	109.79	165.59	113.90	87.18	0.258991	1.000000	-
Rv0378	-	3	118.35	150.48	99.98	133.06	91.75	135.86	0.983362	1.000000	-
Rv0379	secE2	3	278.52	287.58	199.38	248.95	195.22	314.73	0.499377	1.000000	-
Rv0380c	-	10	220.59	232.43	257.90	213.19	200.16	205.69	0.885447	1.000000	-
Rv0381c	-	17	200.68	238.24	185.63	316.20	304.81	217.89	0.015157	0.249911	-
Rv0382c	pyrE	12	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv0383c	-	9	95.80	74.44	85.76	85.44	49.82	67.51	0.980953	1.000000	-
Rv0384c	clpB	25	16.68	61.92	26.01	43.27	58.51	40.57	0.000000	0.000000	-
Rv0385	-	19	435.64	419.83	412.31	413.16	364.59	341.57	0.852411	1.000000	-
Rv0386	-	44	251.17	214.44	226.70	245.81	225.55	211.66	0.876205	1.000000	-
Rv0387c	-	14	128.27	138.26	129.32	124.85	155.24	109.33	0.885884	1.000000	-
Rv0388c	PPE9	10	42.53	32.14	38.83	43.34	44.68	43.85	0.971642	1.000000	-
Rv0389	purT	9	313.07	333.46	365.55	312.57	281.04	339.39	0.897067	1.000000	-
Rv0390	-	8	294.12	285.42	278.21	257.38	260.30	248.60	0.950036	1.000000	-
Rv0391	metZ	21	86.26	89.98	78.07	88.12	83.79	93.42	0.984038	1.000000	-
Rv0392c	ndhA	16	162.20	198.51	177.42	189.05	174.66	175.58	0.940192	1.000000	-
Rv0393	-	10	330.63	308.07	342.57	352.94	375.24	314.29	0.971331	1.000000	-
Rv0394c	-	10	170.70	190.74	189.06	177.47	177.71	191.17	0.994710	1.000000	-
Rv0395	-	7	135.21	165.07	138.46	140.01	113.23	104.78	0.897541	1.000000	-
Rv0396	-	5	30.25	22.40	11.94	14.05	34.12	25.40	0.627969	1.000000	-
Rv0397	-	3	214.49	231.53	221.71	215.34	272.49	208.67	0.998761	1.000000	-
Rv0398c	-	5	123.49	116.36	151.72	116.12	158.44	115.49	0.885354	1.000000	-
Rv0399c	lpqK	24	57.35	69.89	61.82	59.62	70.30	60.69	0.902960	1.000000	-
Rv0400c	fadE7	10	93.12	66.17	99.55	84.18	51.53	73.49	0.102185	1.000000	-
Rv0401	-	3	75.46	97.08	112.80	83.24	93.43	64.05	0.399302	1.000000	-
Rv0402c	mmpL1	55	102.81	84.80	87.09	95.61	84.94	97.67	0.514749	1.000000	-
Rv0403c	mmpS1	7	68.38	86.03	87.10	87.58	102.52	126.31	0.224294	1.000000	-
Rv0404	fadD30	87	16.68	19.46	19.13	16.71	17.51	21.67	0.629925	1.000000	-
Rv0405	pks6	123	39.83	48.61	42.93	42.12	43.49	43.84	0.964843	1.000000	-
Rv0406c	-	14	186.47	219.35	183.62	224.90	184.17	197.14	0.925298	1.000000	-
Rv0407	fgd1	20	194.29	195.24	201.77	184.29	185.48	215.86	0.955667	1.000000	-
Rv0408	pta	43	140.42	121.74	143.72	128.16	121.08	124.19	0.848353	1.000000	-
Rv0409	ackA	17	45.42	41.00	45.34	42.28	41.50	52.00	0.948937	1.000000	-
Rv0410c	pknG	31	33.48	79.47	31.30	53.58	73.80	48.02	0.000152	0.004427	-
Rv0411c	glnH	9	25.72	47.09	40.20	35.15	49.04	41.64	0.259374	1.000000	-
Rv0412c	-	23	54.29	124.06	36.16	78.47	103.40	81.99	0.000000	0.000014	-
Rv0413	mutT3	7	208.71	222.55	182.39	252.99	230.15	227.47	0.953830	1.000000	-
Rv0414c	thiE	10	28.28	27.60	18.75	21.29	22.93	20.19	0.996151	1.000000	-
Rv0415	thiO	12	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv0416	thiS	4	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv0417	thiG	15	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv0418	lpqL	28	105.53	120.51	128.66	117.26	123.17	109.83	0.818054	1.000000	-
Rv0419	lpqM	22	83.50	73.68	72.55	68.73	59.97	76.26	0.631716	1.000000	-
Rv0420c	-	9	253.86	257.28	241.19	268.90	234.00	245.40	0.996732	1.000000	-
Rv0421c	-	10	108.08	84.75	105.73	97.54	73.71	97.00	0.978927	1.000000	-
Rv0422c	thiD	14	0.67	1.78	0.90	0.00	0.84	0.39	0.259082	1.000000	-
Rv0423c	thiC	22	7.19	3.95	7.95	1.27	2.26	3.11	0.263954	1.000000	-
Rv0424c	-	8	65.61	61.19	64.16	51.12	66.58	84.50	0.742475	1.000000	-
Rv0425c	ctpH	41	155.76	157.40	163.24	169.96	163.00	135.10	0.830691	1.000000	-
Rv0426c	-	2	197.22	206.00	235.39	173.24	151.13	216.56	0.829005	1.000000	-
Rv0427c	xthA	13	173.06	203.00	175.30	171.99	156.54	173.36	0.638455	1.000000	-
Rv0428c	-	16	109.78	93.71	92.93	88.88	94.52	119.11	0.473939	1.000000	-
Rv0429c	def	9	0.61	0.00	0.00	0.00	0.00	0.00	0.605764	1.000000	-
Rv0430	-	3	1.29	0.00	0.00	0.00	0.00	0.00	0.621887	1.000000	-
Rv0431	-	10	57.96	125.67	73.46	109.07	115.21	89.06	0.140169	1.000000	-
Rv0432	sodC	12	283.11	286.90	259.94	241.59	230.19	255.94	0.836110	1.000000	-
Rv0433	-	23	220.09	195.44	222.25	183.64	174.92	184.82	0.888067	1.000000	-
Rv0434	-	13	259.96	190.95	221.03	199.21	224.22	215.44	0.884768	1.000000	-
Rv0435c	-	23	254.09	244.63	240.35	218.29	238.57	231.31	0.967089	1.000000	-
Rv0436c	pssA	17	244.84	275.13	196.90	231.23	233.46	244.19	0.666674	1.000000	-
Rv0437c	psd	8	208.76	282.45	173.09	191.60	238.19	205.81	0.885279	1.000000	-
Rv0438c	moeA2	14	231.06	181.47	209.56	180.11	194.76	218.34	0.777674	1.000000	-
Rv0439c	-	19	261.63	227.23	247.73	233.94	197.19	211.96	0.962147	1.000000	-
Rv0440	groEL	13	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv0441c	-	9	142.79	161.03	153.04	170.14	145.58	172.05	0.958381	1.000000	-
Rv0442c	PPE10	24	186.13	197.13	203.53	182.93	188.14	191.10	0.999111	1.000000	-
Rv0443	-	14	116.67	137.04	136.77	143.14	141.39	126.63	0.860895	1.000000	-
Rv0444c	-	9	181.70	185.31	159.68	181.48	169.81	157.09	0.986569	1.000000	-
Rv0445c	sigK	10	247.66	250.22	236.06	258.69	293.73	280.84	0.944412	1.000000	-
Rv0446c	-	17	96.80	114.47	108.39	116.70	127.34	119.78	0.838702	1.000000	-
Rv0447c	ufaA1	27	225.52	253.83	228.48	234.01	230.45	216.12	0.975021	1.000000	-
Rv0448c	-	16	216.93	206.54	211.56	212.61	204.55	199.34	0.999378	1.000000	-
Rv0449c	-	23	212.71	198.70	213.99	204.82	212.79	189.91	0.997894	1.000000	-
Rv0450c	mmpL4	84	35.89	48.14	60.14	58.63	65.78	46.05	0.003813	0.078426	-
Rv0451c	mmpS4	15	0.26	0.00	0.00	0.29	0.48	0.36	0.858638	1.000000	-
Rv0452	-	10	174.20	183.56	164.48	185.49	192.15	188.96	0.991450	1.000000	-
Rv0453	PPE11	23	221.72	220.75	182.46	215.02	206.88	214.82	0.954342	1.000000	-
Rv0454	-	6	324.17	330.45	275.44	326.82	346.95	312.06	0.996466	1.000000	-
Rv0455c	-	11	0.00	0.93	10.01	83.37	100.58	0.43	0.000000	0.000000	-
Rv0456c	echA2	11	119.35	134.22	124.81	148.33	130.20	127.01	0.831498	1.000000	-
Rv0456A	-	4	182.11	200.41	195.96	190.79	197.63	212.15	0.998602	1.000000	-
Rv0457c	-	38	124.32	135.53	127.17	132.99	129.49	126.51	0.997714	1.000000	-
Rv0458	-	23	156.41	150.68	142.53	155.28	156.32	155.28	0.997983	1.000000	-
Rv0459	-	5	218.88	170.94	195.80	196.63	189.53	198.33	0.985007	1.000000	-
Rv0460	-	3	160.80	166.88	101.13	117.14	152.18	166.44	0.122091	1.000000	-
Rv0461	-	16	203.52	178.17	162.39	187.06	201.21	207.70	0.917018	1.000000	-
Rv0462	lpd	27	3.15	11.09	4.18	0.70	0.97	5.53	0.000000	0.000000	-
Rv0463	-	4	224.28	180.64	235.83	215.01	300.57	249.95	0.926354	1.000000	-
Rv0464c	-	15	101.84	143.31	121.39	142.88	147.94	127.35	0.736048	1.000000	-
Rv0465c	-	28	203.78	226.17	202.66	191.30	169.77	221.61	0.605708	1.000000	-
Rv0466	-	8	122.02	182.38	145.03	134.92	132.31	149.52	0.836246	1.000000	-
Rv0467	icl	18	377.18	82.71	345.62	115.62	98.19	82.50	0.000000	0.000000	-
Rv0468	fadB2	13	57.01	56.41	61.89	46.78	49.75	64.29	0.969439	1.000000	-
Rv0469	umaA	24	45.43	54.72	50.97	59.28	53.65	60.47	0.864006	1.000000	-
Rv0470c	pcaA	12	82.11	159.77	79.56	175.72	186.86	134.86	0.002719	0.058652	-
Rv0470A	-	11	578.52	559.85	509.12	490.55	492.37	502.12	0.944380	1.000000	-
Rv0471c	-	12	575.75	529.88	532.62	529.97	486.53	518.97	0.995115	1.000000	-
Rv0472c	-	10	89.16	143.79	76.66	65.69	80.22	155.09	0.009479	0.176704	-
Rv0473	-	16	322.11	290.59	242.03	262.64	253.79	269.61	0.923913	1.000000	-
Rv0474	-	7	352.52	359.67	324.02	351.78	344.83	369.21	0.995382	1.000000	-
Rv0475	hbhA	9	293.40	283.07	254.62	270.13	250.13	295.62	0.957238	1.000000	-
Rv0476	-	6	254.22	260.54	251.86	250.11	247.22	237.67	0.999749	1.000000	-
Rv0477	-	5	570.42	503.82	582.84	458.62	466.49	472.32	0.293859	1.000000	-
Rv0478	deoC	3	217.23	175.33	196.88	155.34	216.34	242.09	0.860914	1.000000	-
Rv0479c	-	13	42.99	25.83	32.78	36.11	28.25	23.27	0.986791	1.000000	-
Rv0480c	-	16	178.93	182.68	183.92	178.82	158.41	179.00	0.997132	1.000000	-
Rv0481c	-	12	175.72	178.48	187.29	171.84	192.05	192.79	0.992503	1.000000	-
Rv0482	murB	13	11.57	12.90	12.97	16.28	14.72	12.72	0.998899	1.000000	-
Rv0483	lprQ	29	306.38	319.97	293.45	293.87	312.38	288.73	0.992059	1.000000	-
Rv0484c	-	10	412.01	321.83	305.65	328.17	305.40	273.52	0.888522	1.000000	-
Rv0485	-	23	131.97	127.57	106.39	97.73	88.83	131.91	0.463914	1.000000	-
Rv0486	-	13	321.69	195.87	333.52	131.71	131.97	226.62	0.000739	0.018665	-
Rv0487	-	9	419.29	370.17	376.26	297.54	257.45	348.42	0.256610	1.000000	-
Rv0488	-	9	192.35	211.65	209.12	218.43	203.44	184.08	0.978796	1.000000	-
Rv0489	gpm1	11	20.14	7.85	11.93	0.39	1.23	1.41	0.000007	0.000254	-
Rv0490	senX3	16	183.42	165.12	169.19	176.93	159.58	169.28	0.996472	1.000000	-
Rv0491	regX3	9	343.92	328.87	359.51	347.98	307.60	335.39	0.997247	1.000000	-
Rv0492c	-	18	466.60	428.09	416.70	414.85	377.12	349.78	0.569557	1.000000	-
Rv0492A	-	5	487.15	413.63	372.77	373.82	344.71	444.33	0.585894	1.000000	-
Rv0493c	-	17	224.01	192.19	209.45	181.34	203.56	222.99	0.882121	1.000000	-
Rv0494	-	7	178.72	169.29	170.38	204.03	165.79	175.42	0.991323	1.000000	-
Rv0495c	-	13	58.12	61.23	69.89	37.89	46.79	59.91	0.667768	1.000000	-
Rv0496	-	8	211.63	236.89	188.88	200.78	219.61	215.41	0.983266	1.000000	-
Rv0497	-	14	97.14	116.51	106.46	129.29	175.47	110.18	0.444882	1.000000	-
Rv0498	-	12	255.72	286.31	235.61	273.21	247.87	262.46	0.978793	1.000000	-
Rv0499	-	5	175.46	167.39	187.64	185.83	167.75	153.82	0.831515	1.000000	-
Rv0500	proC	13	20.53	19.12	18.80	23.22	23.04	26.85	0.873399	1.000000	-
Rv0500A	-	4	93.16	121.94	109.38	98.31	128.86	124.92	0.988619	1.000000	-
Rv0500B	-	1	112.97	61.90	118.70	74.17	74.90	76.35	1.000000	1.000000	TA sites <= 1
Rv0501	galE2	25	123.66	150.84	127.51	142.45	150.15	148.00	0.840579	1.000000	-
Rv0502	-	19	154.22	185.05	150.64	177.05	182.56	194.62	0.824972	1.000000	-
Rv0503c	cmaA2	20	174.61	241.39	244.72	268.95	297.21	180.52	0.078104	0.894494	-
Rv0504c	-	8	9.69	12.07	14.55	22.46	41.84	3.79	0.000925	0.022361	-
Rv0505c	serB1	22	72.37	84.84	67.46	71.53	74.91	71.74	0.942923	1.000000	-
Rv0506	mmpS2	9	161.13	159.26	141.07	114.14	139.49	168.51	0.723876	1.000000	-
Rv0507	mmpL2	81	82.19	79.46	77.53	76.52	81.17	87.20	0.956036	1.000000	-
Rv0508	-	8	187.01	143.85	134.70	140.59	121.16	203.08	0.844665	1.000000	-
Rv0509	hemA	22	1.45	1.62	1.70	100.78	89.41	19.67	0.000000	0.000000	-
Rv0510	hemC	12	0.46	0.85	0.52	128.38	128.99	33.88	0.000000	0.000000	-
Rv0511	hemD	18	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv0512	hemB	22	4.12	8.36	12.67	99.32	105.18	32.69	0.000000	0.000000	-
Rv0513	-	7	109.19	151.53	103.08	144.32	152.11	178.31	0.015870	0.258453	-
Rv0514	-	2	391.60	368.82	375.04	451.31	404.33	456.02	0.999457	1.000000	-
Rv0515	-	18	321.10	323.24	305.17	329.79	289.16	295.01	0.991335	1.000000	-
Rv0516c	-	9	174.17	182.99	172.23	151.98	151.08	159.62	0.978279	1.000000	-
Rv0517	-	21	259.88	281.07	269.48	268.87	263.69	269.20	0.997277	1.000000	-
Rv0518	-	12	210.13	203.94	174.72	201.32	219.37	219.44	0.994140	1.000000	-
Rv0519c	-	9	294.95	270.47	273.15	298.47	254.02	265.84	0.995946	1.000000	-
Rv0520	-	5	123.17	132.98	117.22	125.00	129.81	166.23	0.882269	1.000000	-
Rv0521	-	5	48.36	60.92	53.81	34.27	58.13	48.07	0.469034	1.000000	-
Rv0522	gabP	23	179.64	172.41	147.95	157.41	148.53	179.49	0.860885	1.000000	-
Rv0523c	-	9	133.56	111.52	132.16	140.63	137.38	152.08	0.962165	1.000000	-
Rv0524	hemL	21	0.44	3.42	2.37	13.66	16.45	14.91	0.000000	0.000000	-
Rv0525	-	10	41.23	26.56	29.70	38.97	31.58	33.04	0.996590	1.000000	-
Rv0526	-	7	9.81	17.34	8.03	4.72	2.71	15.23	0.001131	0.026242	-
Rv0527	ccdA	5	7.98	2.04	9.40	0.00	1.45	5.26	0.010311	0.188722	-
Rv0528	-	16	5.54	6.35	3.52	0.91	0.28	5.58	0.004180	0.085102	-
Rv0529	ccsA	18	2.64	3.11	3.51	0.80	0.25	2.73	0.201564	1.000000	-
Rv0530	-	17	167.14	158.24	193.56	157.16	145.28	149.61	0.864160	1.000000	-
Rv0531	-	4	92.35	82.84	57.77	73.91	68.53	64.62	0.938260	1.000000	-
Rv0532	PE_PGRS6	20	205.54	191.40	183.54	194.07	167.27	160.87	0.931490	1.000000	-
Rv0533c	fabH	16	328.42	284.37	300.33	305.10	301.28	259.05	0.962386	1.000000	-
Rv0534c	menA	11	5.32	5.12	14.54	0.84	0.00	6.01	0.000021	0.000717	-
Rv0535	pnp	9	202.67	212.51	205.28	224.24	172.60	185.59	0.985254	1.000000	-
Rv0536	galE3	12	120.82	107.51	146.75	118.26	113.06	77.83	0.003123	0.065930	-
Rv0537c	-	19	234.20	231.78	218.76	230.32	212.84	220.74	0.991151	1.000000	-
Rv0538	-	15	185.96	211.81	226.87	220.01	210.45	204.98	0.917295	1.000000	-
Rv0539	-	6	54.79	65.27	60.99	46.22	56.08	64.84	0.952208	1.000000	-
Rv0540	-	11	140.26	127.11	168.40	161.78	120.34	129.88	0.843753	1.000000	-
Rv0541c	-	18	0.00	1.67	1.75	3.13	3.66	0.86	0.013103	0.224386	-
Rv0542c	menE	14	5.93	2.51	6.26	0.00	0.52	1.11	0.000034	0.001120	-
Rv0543c	-	2	0.00	2.60	0.00	0.00	3.63	0.00	0.409466	1.000000	-
Rv0544c	-	6	257.82	303.75	257.06	403.85	371.22	320.22	0.732862	1.000000	-
Rv0545c	pitA	14	144.76	185.25	142.59	273.55	252.08	140.13	0.068291	0.806159	-
Rv0546c	-	8	61.69	55.45	73.84	80.66	77.83	89.08	0.174234	1.000000	-
Rv0547c	-	10	176.85	162.30	157.28	159.70	152.68	157.04	0.992354	1.000000	-
Rv0548c	menB	12	5.96	8.90	5.49	1.97	2.94	4.21	0.069137	0.812855	-
Rv0549c	-	4	376.86	345.66	310.40	406.66	283.84	324.71	0.437162	1.000000	-
Rv0550c	-	3	381.47	293.96	322.66	290.07	253.84	232.44	0.895632	1.000000	-
Rv0551c	fadD8	32	167.41	167.73	168.61	162.03	176.46	183.87	0.971212	1.000000	-
Rv0552	-	19	219.96	216.08	215.11	214.10	207.11	234.99	0.997316	1.000000	-
Rv0553	menC	12	28.23	26.32	18.26	17.04	22.95	29.00	0.963717	1.000000	-
Rv0554	bpoC	14	198.59	179.80	177.90	141.13	130.05	221.86	0.052695	0.659097	-
Rv0555	menD	15	1.40	2.01	1.26	0.00	0.48	0.99	0.201196	1.000000	-
Rv0556	-	13	1.32	0.00	5.30	5.72	2.29	8.57	0.099912	1.000000	-
Rv0557	pimB	14	48.55	40.52	67.09	68.42	72.63	51.80	0.301464	1.000000	-
Rv0558	ubiE	14	4.05	13.81	4.01	4.39	11.28	4.23	0.000030	0.001015	-
Rv0559c	-	6	180.69	199.76	191.44	174.90	216.78	205.49	0.976893	1.000000	-
Rv0560c	-	15	75.23	90.62	81.78	82.04	100.56	82.04	0.897397	1.000000	-
Rv0561c	-	18	165.13	131.05	167.76	119.36	123.00	125.23	0.471302	1.000000	-
Rv0562	grcC1	14	0.00	2.88	1.11	0.00	0.52	0.39	0.015942	0.258568	-
Rv0563	htpX	11	214.20	258.05	222.34	420.98	468.96	190.38	0.000002	0.000083	-
Rv0564c	gpsA	11	215.35	175.69	176.47	198.62	153.55	162.12	0.773034	1.000000	-
Rv0565c	-	36	179.41	192.56	166.16	190.24	192.39	183.97	0.932057	1.000000	-
Rv0566c	-	5	72.39	79.59	65.03	61.03	67.32	79.68	0.997538	1.000000	-
Rv0567	-	19	168.31	154.78	153.39	146.34	148.44	177.22	0.861009	1.000000	-
Rv0568	cyp135B1	12	280.42	242.53	257.54	255.30	207.08	248.60	0.927025	1.000000	-
Rv0569	-	3	392.79	379.06	319.04	368.84	329.62	354.30	0.884516	1.000000	-
Rv0570	nrdZ	37	124.70	107.56	124.92	124.34	119.55	112.57	0.958580	1.000000	-
Rv0571c	-	13	66.46	51.31	66.31	60.80	53.00	57.94	0.826901	1.000000	-
Rv0572c	-	8	181.06	162.69	157.78	145.69	164.46	179.74	0.972734	1.000000	-
Rv0573c	-	16	171.60	153.10	149.50	180.54	172.41	143.97	0.861918	1.000000	-
Rv0574c	-	20	162.73	185.02	150.08	177.25	159.43	146.72	0.880811	1.000000	-
Rv0575c	-	14	372.29	328.18	369.79	306.60	295.30	281.25	0.748965	1.000000	-
Rv0576	-	19	146.03	150.36	139.47	138.50	151.01	133.94	0.991048	1.000000	-
Rv0577	TB27.3	13	56.64	47.78	48.18	45.91	51.72	63.05	0.933832	1.000000	-
Rv0578c	PE_PGRS7	27	116.40	141.40	116.14	127.40	114.70	122.85	0.957140	1.000000	-
Rv0579	-	15	208.90	181.33	216.23	211.28	202.18	207.92	0.986942	1.000000	-
Rv0580c	-	9	234.53	148.91	191.93	177.91	167.40	177.32	0.182656	1.000000	-
Rv0581	-	4	409.44	315.75	384.65	362.71	352.55	289.89	0.951050	1.000000	-
Rv0582	-	9	55.87	54.82	50.67	45.60	71.17	64.65	0.552233	1.000000	-
Rv0583c	lpqN	7	99.62	156.93	136.75	145.96	131.38	131.41	0.853120	1.000000	-
Rv0584	-	62	117.22	102.57	115.61	98.45	100.03	111.49	0.413195	1.000000	-
Rv0585c	-	41	110.11	86.82	108.81	93.44	83.34	97.91	0.606395	1.000000	-
Rv0586	-	12	32.34	30.95	36.80	42.33	41.23	38.73	0.942423	1.000000	-
Rv0587	yrbE2A	12	61.11	51.00	74.66	52.21	50.37	55.02	0.474132	1.000000	-
Rv0588	yrbE2B	15	75.04	62.52	63.77	65.30	68.93	57.66	0.970889	1.000000	-
Rv0589	mce2A	27	49.20	54.10	54.76	40.16	41.52	42.65	0.930373	1.000000	-
Rv0590	mce2B	10	69.03	48.38	59.36	53.62	48.81	52.74	0.811569	1.000000	-
Rv0590A	-	7	27.99	23.21	40.23	26.62	17.15	28.37	0.494928	1.000000	-
Rv0591	mce2C	22	121.80	126.44	119.60	109.08	108.53	117.05	0.906745	1.000000	-
Rv0592	mce2D	29	82.32	65.92	86.26	83.70	75.58	74.71	0.767270	1.000000	-
Rv0593	lprL	19	84.37	71.38	77.18	71.17	61.74	78.01	0.910405	1.000000	-
Rv0594	mce2F	30	163.33	167.40	157.04	151.24	153.80	175.36	0.922345	1.000000	-
Rv0595c	-	8	200.19	204.05	183.65	216.93	206.60	243.40	0.846269	1.000000	-
Rv0596c	-	5	39.89	80.99	43.58	55.63	33.22	51.17	0.842236	1.000000	-
Rv0597c	-	13	177.99	153.96	209.22	161.01	164.74	166.49	0.894115	1.000000	-
Rv0598c	-	7	180.11	148.19	184.06	213.95	173.12	190.81	0.978478	1.000000	-
Rv0599c	-	6	82.30	87.45	73.98	68.33	57.31	59.89	0.857376	1.000000	-
Rv0600c	-	3	270.13	249.36	245.81	208.35	234.55	198.79	0.864165	1.000000	-
Rv0601c	-	4	188.87	127.89	191.65	143.34	123.34	135.17	0.938799	1.000000	-
Rv0602c	tcrA	11	261.54	250.56	287.35	280.60	229.60	227.16	0.875443	1.000000	-
Rv0603	-	1	108.87	56.20	174.29	145.67	121.85	64.05	1.000000	1.000000	TA sites <= 1
Rv0604	lpqO	7	275.38	251.29	288.29	237.16	253.54	257.89	0.994833	1.000000	-
Rv0605	-	10	314.92	299.26	314.00	321.30	340.09	301.30	0.999070	1.000000	-
Rv0606	-	8	223.52	182.62	152.71	176.03	219.35	146.10	0.724301	1.000000	-
Rv0607	-	1	311.91	275.40	364.69	263.17	194.05	145.86	1.000000	1.000000	TA sites <= 1
Rv0608	-	2	316.01	191.50	203.59	254.32	237.28	190.88	0.978567	1.000000	-
Rv0609	-	7	95.69	134.03	102.74	81.84	86.29	95.43	0.408530	1.000000	-
Rv0609A	-	2	163.26	152.97	227.64	192.82	174.68	130.06	0.236407	1.000000	-
Rv0610c	-	11	206.04	273.22	240.12	209.50	231.17	202.39	0.761468	1.000000	-
Rv0611c	-	12	90.91	110.35	108.01	81.99	102.08	115.38	0.741656	1.000000	-
Rv0612	-	6	236.67	192.78	237.88	242.82	215.15	216.33	0.978347	1.000000	-
Rv0613c	-	16	310.43	271.97	278.65	281.47	257.64	225.39	0.860941	1.000000	-
Rv0614	-	14	181.69	199.89	189.24	176.40	194.92	211.09	0.982177	1.000000	-
Rv0615	-	4	670.67	486.91	472.82	449.49	444.88	466.08	0.813333	1.000000	-
Rv0616c	-	6	130.72	126.92	151.39	142.58	94.26	116.89	0.795514	1.000000	-
Rv0617	-	3	256.22	263.56	251.94	265.25	189.42	178.89	0.965478	1.000000	-
Rv0618	galTa	9	125.98	85.50	110.80	71.73	78.57	76.29	0.104664	1.000000	-
Rv0619	galTb	12	105.44	80.89	99.78	66.53	66.90	62.63	0.126347	1.000000	-
Rv0620	galK	9	118.94	98.75	147.63	123.39	97.43	104.00	0.504262	1.000000	-
Rv0621	-	9	177.05	160.13	127.12	131.59	118.70	134.09	0.887907	1.000000	-
Rv0622	-	13	68.52	47.84	71.95	66.25	63.16	88.83	0.822532	1.000000	-
Rv0623	-	3	226.93	200.18	199.38	176.42	209.30	170.92	0.992998	1.000000	-
Rv0624	-	6	169.14	176.91	173.67	173.71	187.63	193.68	0.994041	1.000000	-
Rv0625c	-	10	297.67	251.53	285.45	308.82	248.46	215.77	0.922364	1.000000	-
Rv0626	-	4	138.81	129.60	154.98	116.60	125.83	144.39	0.967457	1.000000	-
Rv0627	-	1	7.53	30.40	47.05	23.40	58.70	30.35	1.000000	1.000000	TA sites <= 1
Rv0628c	-	4	279.31	232.51	235.68	235.71	195.08	220.32	0.993683	1.000000	-
Rv0629c	recD	16	75.38	85.26	67.03	70.36	75.07	67.54	0.967699	1.000000	-
Rv0630c	recB	34	152.41	126.12	150.95	136.03	133.91	122.02	0.783413	1.000000	-
Rv0631c	recC	19	163.95	130.80	163.17	154.79	131.71	133.98	0.917703	1.000000	-
Rv0632c	echA3	13	115.59	96.51	101.25	117.39	118.63	123.14	0.908553	1.000000	-
Rv0633c	-	13	235.04	249.23	244.60	258.11	250.44	249.63	0.999537	1.000000	-
Rv0634c	-	13	76.00	84.64	91.18	67.74	80.04	94.83	0.828617	1.000000	-
Rv0634A	-	6	84.80	93.42	99.23	104.96	99.38	93.96	0.992555	1.000000	-
Rv0634B	rpmG	3	0.00	0.00	0.00	4.89	4.82	0.00	0.228327	1.000000	-
Rv0635	-	14	0.00	0.36	0.00	0.00	0.00	0.00	0.307721	1.000000	-
Rv0636	-	7	0.00	0.00	0.00	0.00	0.64	0.00	0.309247	1.000000	-
Rv0637	-	7	11.50	25.54	9.83	13.44	27.83	20.83	0.190203	1.000000	-
Rv0638	secE	9	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv0639	nusG	12	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv0640	rplK	5	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv0641	rplA	7	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv0642c	mmaA4	18	5.83	29.82	15.55	42.14	48.88	19.04	0.000000	0.000000	-
Rv0643c	mmaA3	22	147.57	220.18	147.93	232.97	237.84	197.51	0.031922	0.450073	-
Rv0644c	mmaA2	11	280.16	296.47	337.41	370.21	407.58	299.07	0.660734	1.000000	-
Rv0645c	mmaA1	20	382.25	355.41	347.00	360.21	361.66	380.14	0.988650	1.000000	-
Rv0646c	lipG	10	324.80	243.36	225.37	224.34	239.31	219.85	0.080741	0.910044	-
Rv0647c	-	14	5.12	9.42	4.46	8.67	14.50	11.24	0.802301	1.000000	-
Rv0648	-	38	270.30	257.38	280.20	264.62	270.50	243.58	0.940591	1.000000	-
Rv0649	fabD2	4	505.08	396.38	570.86	442.71	395.64	321.54	0.926154	1.000000	-
Rv0650	-	5	189.84	173.97	183.97	237.08	237.20	177.55	0.662159	1.000000	-
Rv0651	rplJ	5	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv0652	rplL	0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	TA sites <= 1
Rv0653c	-	11	212.62	233.22	239.48	256.08	234.05	238.64	0.978055	1.000000	-
Rv0654	-	27	315.80	298.88	299.63	288.26	277.73	259.47	0.986432	1.000000	-
Rv0655	mkl	14	70.98	111.56	60.35	123.63	138.17	83.95	0.179417	1.000000	-
Rv0656c	-	4	176.64	194.61	194.69	177.40	220.31	201.15	0.891273	1.000000	-
Rv0657c	-	1	179.81	179.70	131.30	259.94	163.15	217.21	1.000000	1.000000	TA sites <= 1
Rv0658c	-	17	135.38	171.05	147.34	159.46	141.67	147.58	0.883342	1.000000	-
Rv0659c	-	4	290.21	317.91	317.25	321.31	297.05	373.66	0.997135	1.000000	-
Rv0660c	-	2	680.08	572.69	533.86	600.22	405.83	428.04	0.025956	0.376412	-
Rv0661c	-	5	274.06	209.30	236.73	285.74	228.24	238.95	0.329730	1.000000	-
Rv0662c	-	6	135.08	128.20	192.28	127.94	137.88	137.56	0.905941	1.000000	-
Rv0663	atsD	46	104.19	94.29	108.00	105.78	105.94	87.70	0.759723	1.000000	-
Rv0664	-	3	260.08	137.17	254.26	242.58	218.30	174.54	0.677762	1.000000	-
Rv0665	-	5	190.23	148.96	134.29	169.71	176.64	165.63	0.929019	1.000000	-
Rv0666	-	0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	TA sites <= 1
Rv0667	rpoB	38	0.00	0.27	0.00	0.00	0.00	0.00	0.033763	0.467756	-
Rv0668	rpoC	51	23.64	23.05	18.19	13.80	15.27	20.02	0.692030	1.000000	-
Rv0669c	-	37	177.12	180.29	193.52	185.08	164.02	183.00	0.955665	1.000000	-
Rv0670	end	5	335.82	239.29	255.78	262.59	325.16	232.70	0.698697	1.000000	-
Rv0671	lpqP	13	158.62	152.11	164.45	156.94	160.51	151.75	0.999422	1.000000	-
Rv0672	fadE8	27	131.37	140.65	150.22	147.23	158.01	131.51	0.940761	1.000000	-
Rv0673	echA4	9	102.63	115.50	123.87	96.43	90.46	107.52	0.798072	1.000000	-
Rv0674	-	7	24.61	16.84	43.85	17.91	27.59	26.40	0.187041	1.000000	-
Rv0675	echA5	4	32.44	27.09	42.15	42.01	65.88	32.75	0.204034	1.000000	-
Rv0676c	mmpL5	32	0.29	1.58	39.45	104.07	115.48	0.48	0.000000	0.000000	-
Rv0677c	mmpS5	6	1.26	3.33	59.47	148.43	153.10	0.00	0.000000	0.000000	-
Rv0678	-	5	259.01	255.67	223.39	190.18	193.78	337.97	0.609004	1.000000	-
Rv0679c	-	6	165.71	181.76	175.01	223.16	221.64	183.18	0.915372	1.000000	-
Rv0680c	-	3	180.04	304.68	237.63	291.47	362.79	323.63	0.155175	1.000000	-
Rv0681	-	12	227.74	197.81	227.63	178.25	158.43	162.56	0.501473	1.000000	-
Rv0682	rpsL	8	0.00	0.00	0.00	0.00	0.00	0.68	0.308863	1.000000	-
Rv0683	rpsG	5	0.77	0.00	0.00	0.00	0.00	0.00	0.612000	1.000000	-
Rv0684	fusA1	34	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv0685	tuf	11	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv0686	-	12	224.80	218.98	221.37	227.90	222.16	204.80	0.998113	1.000000	-
Rv0687	fabG	17	88.67	96.98	93.88	83.88	81.41	93.37	0.992041	1.000000	-
Rv0688	-	18	101.73	99.28	83.70	85.16	90.43	90.15	0.943362	1.000000	-
Rv0689c	-	4	444.22	379.36	375.75	431.03	331.24	299.27	0.956533	1.000000	-
Rv0690c	-	17	89.98	88.12	112.16	98.59	112.30	99.25	0.960786	1.000000	-
Rv0691c	-	9	113.41	130.70	140.87	113.73	122.43	118.62	0.814257	1.000000	-
Rv0692	-	7	190.50	173.83	151.73	234.19	189.39	226.43	0.854470	1.000000	-
Rv0693	pqqE	18	64.84	49.18	71.88	80.80	81.61	73.20	0.332638	1.000000	-
Rv0694	lldD1	17	51.47	67.72	73.30	67.01	65.98	82.04	0.715681	1.000000	-
Rv0695	-	12	63.13	54.42	57.25	57.68	57.07	53.34	0.999381	1.000000	-
Rv0696	-	26	116.72	94.08	140.41	113.70	111.13	89.68	0.382700	1.000000	-
Rv0697	-	27	23.14	26.60	29.65	22.62	18.68	20.27	0.663480	1.000000	-
Rv0698	-	12	39.66	36.26	50.41	42.36	35.99	33.89	0.914606	1.000000	-
Rv0699	-	2	3.77	10.42	9.47	13.80	13.10	2.35	0.777775	1.000000	-
Rv0700	rpsJ	6	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv0701	rplC	16	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv0702	rplD	11	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv0703	rplW	4	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv0704	rplB	17	0.00	1.19	0.00	0.57	0.26	0.32	0.362683	1.000000	-
Rv0705	rpsS	2	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv0706	rplV	8	0.48	0.00	0.79	0.00	0.00	0.00	0.561949	1.000000	-
Rv0707	rpsC	14	0.00	0.00	0.45	0.00	0.00	0.00	0.307721	1.000000	-
Rv0708	rplP	10	5.77	1.51	1.26	4.21	2.80	1.48	0.691748	1.000000	-
Rv0709	rpmC	4	1.37	0.00	0.00	4.56	4.74	2.53	0.517681	1.000000	-
Rv0710	rpsQ	11	24.96	26.89	22.21	18.98	28.56	24.93	0.998460	1.000000	-
Rv0711	atsA	46	115.47	105.15	113.17	107.84	106.44	94.53	0.917228	1.000000	-
Rv0712	-	19	82.33	59.08	87.31	72.91	65.80	57.64	0.568506	1.000000	-
Rv0713	-	19	187.54	186.84	208.14	205.57	186.49	201.31	0.997267	1.000000	-
Rv0714	rplN	4	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv0715	rplX	5	0.00	1.00	0.00	0.99	0.00	0.00	0.634583	1.000000	-
Rv0716	rplE	4	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv0717	rpsN	2	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv0718	rpsH	10	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv0719	rplF	15	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv0720	rplR	4	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv0721	rpsE	12	29.40	23.12	23.18	36.52	47.37	36.01	0.833031	1.000000	-
Rv0722	rpmD	1	33.77	55.75	6.30	65.77	60.45	29.70	1.000000	1.000000	TA sites <= 1
Rv0723	rplO	2	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv0724	sppA	30	97.30	92.79	85.87	95.05	102.75	99.02	0.981512	1.000000	-
Rv0724A	-	5	103.88	81.86	147.82	123.99	135.18	127.25	0.919924	1.000000	-
Rv0725c	-	15	168.61	130.96	140.89	130.91	138.44	134.79	0.919396	1.000000	-
Rv0726c	-	16	144.70	127.37	134.84	121.20	123.72	144.70	0.947550	1.000000	-
Rv0727c	fucA	12	284.13	213.72	199.19	191.04	173.37	231.45	0.133354	1.000000	-
Rv0728c	serA2	9	171.07	153.58	151.21	158.45	137.67	174.27	0.991557	1.000000	-
Rv0729	xylB	19	263.15	236.12	227.85	245.69	243.41	237.94	0.988166	1.000000	-
Rv0730	-	3	434.22	382.08	408.30	391.65	392.47	353.10	0.998367	1.000000	-
Rv0731c	-	10	327.24	382.10	317.52	321.09	340.98	317.67	0.965045	1.000000	-
Rv0732	secY	28	0.88	1.09	0.00	2.16	1.94	1.28	0.648905	1.000000	-
Rv0733	adk	5	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv0734	mapA	9	101.67	147.84	132.28	138.82	139.03	155.97	0.947905	1.000000	-
Rv0735	sigL	7	329.30	279.65	315.82	390.03	341.07	326.20	0.651614	1.000000	-
Rv0736	-	8	25.78	33.72	20.29	43.44	79.81	16.55	0.001048	0.024592	-
Rv0737	-	5	146.36	136.28	147.64	161.52	176.02	190.13	0.917569	1.000000	-
Rv0738	-	1	143.71	138.00	81.45	64.80	185.05	113.60	1.000000	1.000000	TA sites <= 1
Rv0739	-	18	196.29	247.84	226.36	217.25	233.12	251.34	0.886952	1.000000	-
Rv0740	-	10	79.57	65.82	94.74	68.46	67.12	78.22	0.951246	1.000000	-
Rv0741	-	3	55.98	33.77	43.78	39.09	43.03	49.45	0.844908	1.000000	-
Rv0742	PE_PGRS8	6	330.08	298.33	279.08	257.53	295.75	264.28	0.976563	1.000000	-
Rv0743c	-	9	313.18	305.77	294.82	311.63	291.33	330.10	0.995852	1.000000	-
Rv0744c	-	9	20.86	28.82	26.39	25.47	28.87	37.59	0.582487	1.000000	-
Rv0745	-	7	324.52	300.27	309.69	325.85	335.22	340.18	0.999419	1.000000	-
Rv0746	PE_PGRS9	15	83.89	79.81	68.86	66.03	74.63	64.71	0.897720	1.000000	-
Rv0747	PE_PGRS10	16	168.52	165.15	174.77	168.73	147.32	133.93	0.920011	1.000000	-
Rv0748	-	2	320.85	419.12	377.04	333.01	344.10	391.37	0.983986	1.000000	-
Rv0749	-	4	200.28	144.25	139.07	166.68	128.76	147.84	0.935163	1.000000	-
Rv0749A	-	1	88.34	81.85	34.45	56.87	85.70	85.75	1.000000	1.000000	TA sites <= 1
Rv0750	-	5	161.55	118.03	108.29	119.86	115.65	118.11	0.870420	1.000000	-
Rv0751c	mmsB	7	162.44	159.13	140.57	178.78	189.77	144.91	0.815777	1.000000	-
Rv0752c	fadE9	15	112.90	120.30	133.28	125.69	130.19	121.98	0.965167	1.000000	-
Rv0753c	mmsA	18	175.81	191.07	148.43	162.43	161.73	159.05	0.916911	1.000000	-
Rv0754	PE_PGRS11	31	194.35	192.50	187.56	193.33	171.78	178.69	0.973402	1.000000	-
Rv0755c	PPE12	55	20.76	19.71	17.15	19.12	20.33	21.62	0.997173	1.000000	-
Rv0755A	-	6	157.45	159.62	129.70	154.65	177.04	175.74	0.996630	1.000000	-
Rv0756c	-	7	657.23	548.83	737.51	656.95	596.01	520.36	0.750264	1.000000	-
Rv0757	phoP	12	2.79	4.63	0.52	1.98	1.58	6.05	0.015640	0.255747	-
Rv0758	phoR	18	3.81	11.31	2.26	4.94	2.96	6.66	0.000947	0.022757	-
Rv0759c	-	2	218.54	242.02	227.12	200.24	245.50	204.08	0.955686	1.000000	-
Rv0760c	-	6	27.61	26.47	27.15	27.80	35.34	47.74	0.905924	1.000000	-
Rv0761c	adhB	13	70.76	65.06	73.66	109.99	92.55	72.00	0.774547	1.000000	-
Rv0762c	-	13	186.61	190.00	168.20	186.20	168.92	214.95	0.924841	1.000000	-
Rv0763c	-	2	13.90	50.87	23.52	39.92	19.85	30.03	0.178630	1.000000	-
Rv0764c	cyp51	18	60.25	57.01	61.83	44.33	54.38	53.49	0.847012	1.000000	-
Rv0765c	-	11	79.38	70.40	91.71	77.27	89.17	98.31	0.846602	1.000000	-
Rv0766c	cyp123	25	30.44	27.08	36.91	28.51	36.92	28.47	0.941248	1.000000	-
Rv0767c	-	14	208.64	194.95	174.37	180.73	172.77	162.20	0.975115	1.000000	-
Rv0768	aldA	27	83.57	89.26	97.75	94.47	84.02	81.01	0.948137	1.000000	-
Rv0769	-	17	94.26	87.00	77.12	77.26	75.72	93.90	0.800484	1.000000	-
Rv0770	-	10	194.79	171.23	240.85	179.28	162.69	149.92	0.379379	1.000000	-
Rv0771	-	10	28.50	29.00	26.49	26.17	33.57	44.28	0.636379	1.000000	-
Rv0772	purD	24	0.16	0.00	0.00	0.00	0.00	0.00	0.601074	1.000000	-
Rv0773c	ggtA	20	38.50	41.88	51.73	41.88	43.08	48.08	0.892262	1.000000	-
Rv0774c	-	10	136.55	108.37	99.51	107.70	102.83	102.23	0.879961	1.000000	-
Rv0775	-	9	528.93	443.99	561.00	468.58	492.68	454.68	0.972236	1.000000	-
Rv0776c	-	15	247.28	222.37	273.99	217.89	230.74	265.44	0.823057	1.000000	-
Rv0777	purB	18	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv0778	cyp126	21	90.35	92.80	82.00	93.56	97.30	90.93	0.979970	1.000000	-
Rv0779c	-	8	79.68	78.33	56.20	59.12	65.73	74.28	0.575508	1.000000	-
Rv0780	hemH	26	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv0781	ptrBa	26	24.54	22.75	31.48	23.11	27.56	17.15	0.370539	1.000000	-
Rv0782	ptrBb	45	33.81	25.87	37.70	34.94	34.06	28.33	0.722076	1.000000	-
Rv0783c	emrB	27	57.00	52.53	49.28	45.07	45.76	43.35	0.803839	1.000000	-
Rv0784	-	10	64.95	29.29	111.19	63.42	86.33	38.17	0.015531	0.255008	-
Rv0785	-	35	58.91	55.38	65.02	46.78	49.72	47.80	0.684371	1.000000	-
Rv0786c	-	11	34.74	32.21	32.43	30.96	34.85	35.71	0.999132	1.000000	-
Rv0787	-	16	125.39	128.27	122.22	123.55	128.70	111.69	0.993538	1.000000	-
Rv0787A	-	2	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv0788	purQ	12	0.65	0.42	0.52	0.00	0.38	0.39	0.919703	1.000000	-
Rv0789c	-	7	51.28	53.79	56.86	54.69	42.54	51.90	0.979997	1.000000	-
Rv0790c	-	21	105.93	90.68	91.70	114.55	102.56	99.36	0.958840	1.000000	-
Rv0791c	-	13	72.35	109.18	97.40	102.68	108.08	101.65	0.870519	1.000000	-
Rv0792c	-	19	105.74	136.19	97.70	116.84	105.68	123.73	0.843991	1.000000	-
Rv0793	-	8	228.93	232.10	239.05	248.41	221.86	222.93	0.987799	1.000000	-
Rv0794c	-	20	191.06	135.51	142.68	148.49	160.34	154.97	0.642127	1.000000	-
Rv0795	-	4	229.60	235.36	211.45	247.83	223.15	172.54	0.911638	1.000000	-
Rv0796	-	25	296.13	315.33	336.56	322.45	290.54	304.31	0.943214	1.000000	-
Rv0797	-	13	157.24	166.09	172.62	187.92	179.57	186.28	0.838865	1.000000	-
Rv0798c	cfp29	16	76.28	72.05	68.75	70.66	69.44	87.43	0.963448	1.000000	-
Rv0799c	-	10	49.97	63.50	48.86	58.04	63.79	57.75	0.984325	1.000000	-
Rv0800	pepC	16	132.83	142.52	126.38	129.86	139.71	107.75	0.937063	1.000000	-
Rv0801	-	1	78.94	101.50	102.65	103.94	150.80	117.60	1.000000	1.000000	TA sites <= 1
Rv0802c	-	16	77.76	67.30	69.90	65.39	61.19	64.25	0.943147	1.000000	-
Rv0803	purL	35	1.08	1.17	1.24	1.58	1.01	0.71	0.985210	1.000000	-
Rv0804	-	7	179.13	203.98	180.49	201.61	193.42	156.58	0.924413	1.000000	-
Rv0805	-	18	181.18	148.45	165.20	99.93	111.02	148.74	0.005282	0.104334	-
Rv0806c	cpsY	42	115.44	134.37	92.76	156.98	128.03	132.86	0.080126	0.908247	-
Rv0807	-	2	58.77	86.22	104.37	78.92	92.43	58.08	0.745262	1.000000	-
Rv0808	purF	27	6.74	11.38	7.05	8.58	11.16	8.94	0.943577	1.000000	-
Rv0809	purM	14	0.00	0.00	0.00	0.00	1.03	0.00	0.307721	1.000000	-
Rv0810c	-	4	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv0811c	-	17	10.04	2.09	6.44	4.86	1.75	6.51	0.682604	1.000000	-
Rv0812	-	17	9.28	8.61	10.32	8.26	10.39	8.17	0.999394	1.000000	-
Rv0813c	-	13	213.01	205.47	243.72	247.46	210.86	238.19	0.707891	1.000000	-
Rv0814c	sseC2	3	474.73	476.51	638.99	510.59	476.24	394.17	0.837438	1.000000	-
Rv0815c	cysA2	15	166.48	177.80	177.12	183.30	186.26	183.67	0.999616	1.000000	-
Rv0816c	thiX	3	171.68	125.86	137.63	117.36	91.42	61.02	0.463873	1.000000	-
Rv0817c	-	16	19.88	16.26	14.08	18.51	20.69	10.20	0.989475	1.000000	-
Rv0818	-	11	215.56	209.55	243.62	371.04	459.80	183.49	0.000008	0.000308	-
Rv0819	-	14	120.13	87.42	110.89	79.01	126.34	81.57	0.540359	1.000000	-
Rv0820	phoT	12	22.73	32.92	39.10	71.27	128.84	28.14	0.000000	0.000000	-
Rv0821c	phoY2	6	25.35	27.20	45.31	35.88	29.92	43.24	0.045818	0.587826	-
Rv0822c	-	29	167.04	159.02	167.40	160.64	165.74	184.71	0.983208	1.000000	-
Rv0823c	-	17	282.92	252.03	287.19	257.92	253.11	276.77	0.995537	1.000000	-
Rv0824c	desA1	19	0.00	0.00	0.00	0.00	0.00	0.28	0.307323	1.000000	-
Rv0825c	-	10	174.29	182.38	172.49	182.28	158.14	167.09	0.945260	1.000000	-
Rv0826	-	22	234.81	224.64	258.23	233.07	232.24	229.09	0.990633	1.000000	-
Rv0827c	-	7	112.27	110.08	124.61	113.44	96.15	146.10	0.899946	1.000000	-
Rv0828c	-	10	150.02	146.01	131.73	132.30	149.28	139.09	0.990695	1.000000	-
Rv0829	-	4	188.84	221.58	214.21	196.30	204.61	203.18	0.999028	1.000000	-
Rv0830	-	20	242.92	218.29	231.38	252.43	233.63	251.50	0.931132	1.000000	-
Rv0831c	-	19	162.93	187.65	176.92	162.51	175.27	193.83	0.807623	1.000000	-
Rv0832	PE_PGRS12	4	375.26	416.37	311.21	417.95	370.20	309.71	0.937883	1.000000	-
Rv0833	PE_PGRS13	11	63.33	71.80	69.45	54.26	70.28	55.95	0.959514	1.000000	-
Rv0834c	PE_PGRS14	27	153.51	184.55	158.33	157.39	145.06	150.66	0.722396	1.000000	-
Rv0835	lpqQ	14	91.28	90.85	92.62	106.94	86.26	109.57	0.910910	1.000000	-
Rv0836c	-	9	208.52	191.44	174.47	176.67	183.56	159.36	0.994260	1.000000	-
Rv0837c	-	23	186.31	208.50	217.11	219.18	208.53	198.37	0.925454	1.000000	-
Rv0838	lpqR	7	162.22	167.06	153.44	144.08	167.84	176.40	0.900126	1.000000	-
Rv0839	-	14	135.48	160.28	148.94	162.30	152.18	144.01	0.962978	1.000000	-
Rv0840c	pip	9	45.93	37.21	20.91	24.00	31.69	24.11	0.604236	1.000000	-
Rv0841	-	3	163.85	198.45	162.48	146.58	223.14	202.41	0.929041	1.000000	-
Rv0842	-	24	82.37	102.17	85.24	93.49	93.49	97.57	0.929533	1.000000	-
Rv0843	-	18	104.65	128.47	109.92	120.44	110.34	127.97	0.913458	1.000000	-
Rv0844c	narL	9	569.52	444.11	444.36	481.15	485.20	421.33	0.461200	1.000000	-
Rv0845	-	27	75.20	78.43	77.18	67.15	81.66	72.77	0.977016	1.000000	-
Rv0846c	-	31	48.84	57.97	57.78	49.85	54.22	59.53	0.894262	1.000000	-
Rv0847	lpqS	6	239.77	205.27	215.04	227.52	172.68	180.28	0.968946	1.000000	-
Rv0848	cysK2	28	62.74	57.90	72.44	63.75	66.60	60.44	0.960404	1.000000	-
Rv0849	-	23	113.97	120.68	112.37	110.59	105.43	117.47	0.989136	1.000000	-
Rv0850	-	9	61.91	84.26	63.20	58.32	64.10	63.85	0.869569	1.000000	-
Rv0851c	-	9	100.61	81.27	106.61	86.42	118.98	80.94	0.965210	1.000000	-
Rv0852	fadD16	15	67.16	62.73	54.64	56.10	68.82	82.21	0.538679	1.000000	-
Rv0853c	pdc	26	97.02	98.50	106.55	120.23	95.77	109.71	0.893262	1.000000	-
Rv0854	-	6	112.07	100.40	108.96	96.62	96.23	121.29	0.996629	1.000000	-
Rv0855	far	13	89.62	86.54	90.49	102.47	77.16	106.00	0.835777	1.000000	-
Rv0856	-	5	81.48	94.64	65.04	98.65	96.37	124.98	0.609485	1.000000	-
Rv0857	-	8	213.79	206.48	181.01	158.63	166.98	209.22	0.569017	1.000000	-
Rv0858c	-	21	170.09	207.31	182.85	198.11	164.99	174.82	0.708584	1.000000	-
Rv0859	fadA	8	275.33	261.62	254.19	294.42	263.12	226.68	0.983912	1.000000	-
Rv0860	fadB	27	83.94	91.20	83.80	77.74	71.70	86.18	0.893016	1.000000	-
Rv0861c	ercc3	26	85.68	72.91	97.18	87.80	86.52	90.01	0.907376	1.000000	-
Rv0862c	-	29	128.61	106.56	122.80	128.18	110.18	106.65	0.905282	1.000000	-
Rv0863	-	6	117.48	112.93	103.32	133.69	113.71	154.76	0.955560	1.000000	-
Rv0864	moaC	11	213.86	223.96	214.77	280.29	225.87	218.05	0.932282	1.000000	-
Rv0865	mog	8	143.88	144.86	135.26	137.81	140.45	160.59	0.996561	1.000000	-
Rv0866	moaE2	3	125.79	95.25	134.18	129.83	115.48	127.62	0.966215	1.000000	-
Rv0867c	rpfA	12	183.61	193.86	191.20	182.78	174.54	198.31	0.998854	1.000000	-
Rv0868c	moaD2	6	224.17	289.90	206.56	225.36	217.49	275.17	0.826011	1.000000	-
Rv0869c	moaA	14	205.03	200.78	231.76	198.24	230.41	191.12	0.986893	1.000000	-
Rv0870c	-	6	202.59	135.32	160.55	141.81	144.33	188.67	0.839741	1.000000	-
Rv0871	cspB	4	167.99	166.01	106.40	47.80	40.59	196.55	0.005188	0.102976	-
Rv0872c	PE_PGRS15	27	281.14	274.68	268.94	251.49	232.62	246.07	0.935763	1.000000	-
Rv0873	fadE10	34	190.84	200.48	204.40	125.65	122.74	197.17	0.011452	0.201295	-
Rv0874c	-	9	286.79	230.71	255.19	280.40	231.10	261.54	0.991840	1.000000	-
Rv0875c	-	12	128.93	168.73	142.88	107.30	81.54	151.49	0.062097	0.750114	-
Rv0876c	-	26	135.13	159.72	132.22	107.16	105.52	124.60	0.189703	1.000000	-
Rv0877	-	15	362.23	275.94	327.44	221.35	180.03	235.08	0.010680	0.192380	-
Rv0878c	PPE13	19	93.76	97.99	94.38	90.17	80.00	90.14	0.997039	1.000000	-
Rv0879c	-	3	34.52	61.18	69.78	40.62	93.50	87.10	0.461443	1.000000	-
Rv0880	-	1	26.23	25.40	28.10	27.60	29.75	20.25	1.000000	1.000000	TA sites <= 1
Rv0881	-	15	115.81	131.37	120.72	134.50	118.12	146.87	0.710578	1.000000	-
Rv0882	-	1	138.94	244.50	311.34	303.77	127.15	140.46	1.000000	1.000000	TA sites <= 1
Rv0883c	-	6	0.64	1.70	3.16	0.82	1.96	2.47	0.830812	1.000000	-
Rv0884c	serC	12	14.68	15.38	15.53	21.19	37.13	5.78	0.158890	1.000000	-
Rv0885	-	14	81.59	78.99	90.48	84.69	94.73	83.40	0.980992	1.000000	-
Rv0886	fprB	26	160.87	147.43	160.64	144.45	166.55	149.83	0.945001	1.000000	-
Rv0887c	-	4	62.80	33.01	53.05	53.82	64.99	63.68	0.520180	1.000000	-
Rv0888	-	31	113.34	94.52	106.16	113.23	105.85	96.39	0.942132	1.000000	-
Rv0889c	citA	13	172.20	158.96	198.47	138.96	156.32	135.62	0.568601	1.000000	-
Rv0890c	-	48	244.43	231.94	244.62	228.59	229.85	218.94	0.969166	1.000000	-
Rv0891c	-	25	131.04	123.47	143.50	137.02	135.91	136.57	0.965334	1.000000	-
Rv0892	-	43	54.35	56.89	64.25	59.89	47.90	56.45	0.620059	1.000000	-
Rv0893c	-	24	31.50	26.76	36.06	29.22	23.77	30.83	0.726116	1.000000	-
Rv0894	-	18	48.21	56.79	51.72	46.05	39.69	55.06	0.959844	1.000000	-
Rv0895	-	28	215.33	186.05	204.00	184.23	197.00	193.12	0.827760	1.000000	-
Rv0896	gltA	28	25.90	8.51	33.29	3.42	5.32	5.59	0.000000	0.000000	-
Rv0897c	-	20	157.61	133.66	154.48	142.94	140.37	138.48	0.975897	1.000000	-
Rv0898c	-	1	332.28	233.90	431.24	334.74	402.40	283.01	1.000000	1.000000	TA sites <= 1
Rv0899	ompA	19	61.55	58.34	61.78	51.23	42.65	52.92	0.700478	1.000000	-
Rv0900	-	2	177.19	132.25	195.24	206.55	189.45	239.76	0.271624	1.000000	-
Rv0901	-	9	210.76	174.77	219.75	189.01	257.74	200.15	0.833046	1.000000	-
Rv0902c	prrB	14	27.66	18.11	27.32	11.29	20.55	15.64	0.749428	1.000000	-
Rv0903c	prrA	10	28.58	12.71	24.14	16.27	17.41	22.84	0.913813	1.000000	-
Rv0904c	accD3	24	82.65	87.98	84.77	57.58	72.16	75.32	0.190496	1.000000	-
Rv0905	echA6	9	101.90	114.63	118.71	87.42	99.37	153.51	0.623544	1.000000	-
Rv0906	-	15	207.48	210.93	197.61	204.47	198.37	170.65	0.951006	1.000000	-
Rv0907	-	40	41.84	44.81	50.31	43.50	44.79	41.93	0.886103	1.000000	-
Rv0908	ctpE	30	124.20	113.97	108.83	116.30	121.56	116.15	0.994687	1.000000	-
Rv0909	-	2	3.77	12.70	10.90	7.03	9.48	17.53	0.553429	1.000000	-
Rv0910	-	7	19.13	32.14	18.75	33.69	43.68	31.26	0.554140	1.000000	-
Rv0911	-	15	41.00	36.91	34.64	43.77	32.36	36.49	0.790808	1.000000	-
Rv0912	-	4	254.41	126.74	217.21	187.16	253.82	167.72	0.364098	1.000000	-
Rv0913c	-	41	31.36	33.51	34.37	23.58	26.21	23.27	0.408681	1.000000	-
Rv0914c	-	17	176.44	178.78	146.52	182.06	156.71	158.81	0.956650	1.000000	-
Rv0915c	PPE14	19	122.93	123.86	96.43	119.56	100.92	99.26	0.891524	1.000000	-
Rv0916c	PE7	5	118.29	89.65	77.42	110.65	88.81	88.65	0.722181	1.000000	-
Rv0917	betP	42	120.39	101.73	102.94	101.11	107.10	95.72	0.897336	1.000000	-
Rv0918	-	8	240.23	236.00	280.01	204.12	235.06	246.23	0.829181	1.000000	-
Rv0919	-	10	220.62	227.14	213.78	238.76	236.90	222.85	0.998754	1.000000	-
Rv0920c	-	22	80.11	78.97	81.85	82.13	81.61	74.22	0.998338	1.000000	-
Rv0921	-	7	80.29	80.10	67.43	88.98	76.83	72.47	0.962127	1.000000	-
Rv0922	-	18	132.23	141.96	123.36	131.25	126.73	128.24	0.991921	1.000000	-
Rv0923c	-	21	181.45	164.28	172.58	164.41	180.07	149.99	0.972302	1.000000	-
Rv0924c	mntH	20	99.12	97.98	88.14	125.80	132.61	125.21	0.339261	1.000000	-
Rv0925c	-	17	163.57	144.83	146.68	149.22	166.23	169.68	0.927891	1.000000	-
Rv0926c	-	21	92.93	99.77	102.44	94.94	105.98	89.32	0.900052	1.000000	-
Rv0927c	-	6	216.75	99.98	202.63	171.49	161.29	158.92	0.145633	1.000000	-
Rv0928	pstS3	22	19.96	31.33	43.04	75.21	107.97	25.92	0.000000	0.000006	-
Rv0929	pstC2	17	24.70	31.43	35.32	62.77	115.08	19.54	0.000000	0.000000	-
Rv0930	pstA1	17	21.54	32.84	33.70	59.85	115.33	31.06	0.000000	0.000001	-
Rv0931c	pknD	45	150.40	158.64	147.88	152.31	154.12	148.60	0.998771	1.000000	-
Rv0932c	pstS2	25	47.38	57.61	49.30	67.78	70.67	58.05	0.428530	1.000000	-
Rv0933	pstB	12	94.35	96.93	94.86	92.64	85.05	113.22	0.896414	1.000000	-
Rv0934	pstS1	21	188.48	190.10	206.69	176.98	205.67	175.13	0.894755	1.000000	-
Rv0935	pstC1	12	180.53	149.23	171.96	185.31	166.91	143.34	0.952666	1.000000	-
Rv0936	pstA2	20	87.49	97.80	86.36	100.09	87.17	97.18	0.952528	1.000000	-
Rv0937c	-	12	24.00	15.73	19.55	22.99	17.36	23.02	0.578489	1.000000	-
Rv0938	-	43	87.88	64.80	75.97	67.90	72.67	71.09	0.742422	1.000000	-
Rv0939	-	31	65.68	53.44	63.49	70.45	76.88	70.24	0.643121	1.000000	-
Rv0940c	-	15	43.27	41.91	50.94	58.09	41.14	46.11	0.732959	1.000000	-
Rv0941c	-	9	217.71	189.67	192.37	185.79	195.24	210.95	0.977992	1.000000	-
Rv0942	-	7	103.33	104.11	77.27	113.66	122.06	119.28	0.600668	1.000000	-
Rv0943c	-	17	104.02	79.67	90.95	104.10	118.08	107.53	0.721422	1.000000	-
Rv0944	-	8	122.26	143.97	101.87	125.88	125.39	118.15	0.906087	1.000000	-
Rv0945	-	7	45.37	70.80	69.56	67.01	83.37	79.71	0.698850	1.000000	-
Rv0946c	pgi	19	120.34	119.22	117.69	125.95	129.78	95.19	0.972243	1.000000	-
Rv0948c	-	6	5.67	7.62	1.05	11.75	13.23	13.03	0.759636	1.000000	-
Rv0949	uvrD1	45	47.58	66.92	57.34	76.86	83.50	58.64	0.002075	0.046779	-
Rv0950c	-	21	107.35	138.83	89.58	129.70	127.91	128.76	0.318718	1.000000	-
Rv0951	sucC	16	0.24	0.00	0.00	0.31	0.73	0.34	0.621809	1.000000	-
Rv0952	sucD	11	0.00	0.47	0.00	0.39	0.00	0.43	0.703623	1.000000	-
Rv0953c	-	13	168.78	180.41	171.64	172.35	200.37	177.35	0.927808	1.000000	-
Rv0954	-	28	160.95	184.33	163.67	169.49	173.49	148.38	0.781304	1.000000	-
Rv0955	-	18	72.97	84.85	75.54	82.23	98.46	88.05	0.881411	1.000000	-
Rv0956	purN	15	11.73	26.58	14.80	29.86	35.80	29.82	0.673501	1.000000	-
Rv0957	purH	24	0.16	0.00	0.26	0.00	0.00	0.20	0.666086	1.000000	-
Rv0958	-	15	180.40	226.05	195.77	196.50	185.82	156.27	0.745427	1.000000	-
Rv0959	-	19	129.92	156.37	175.89	128.65	150.43	138.64	0.681107	1.000000	-
Rv0960	-	6	288.68	267.79	232.24	211.88	263.00	225.73	0.983905	1.000000	-
Rv0961	-	7	92.59	87.38	100.12	91.37	86.62	118.61	0.877633	1.000000	-
Rv0962c	lprP	15	191.08	147.31	147.50	172.78	154.83	138.96	0.755482	1.000000	-
Rv0963c	-	10	145.48	141.39	152.66	159.80	158.29	137.09	0.991458	1.000000	-
Rv0964c	-	5	179.95	180.67	188.00	226.19	180.32	194.31	0.987127	1.000000	-
Rv0965c	-	7	197.28	129.11	150.32	144.36	120.05	150.92	0.653799	1.000000	-
Rv0966c	-	9	286.55	227.76	247.27	263.44	262.01	223.42	0.915124	1.000000	-
Rv0967	-	1	114.77	193.55	165.75	177.47	224.55	298.56	1.000000	1.000000	TA sites <= 1
Rv0968	-	6	269.34	354.66	356.11	359.26	321.47	293.99	0.976699	1.000000	-
Rv0969	ctpV	21	240.94	240.99	221.57	207.18	214.33	212.55	0.938502	1.000000	-
Rv0970	-	12	64.77	53.05	52.09	51.02	52.26	69.81	0.799223	1.000000	-
Rv0971c	echA7	6	145.03	140.98	184.06	170.88	173.05	151.26	0.948640	1.000000	-
Rv0972c	fadE12	18	97.77	77.79	107.30	85.29	101.02	73.63	0.497413	1.000000	-
Rv0973c	accA2	25	55.30	46.72	56.48	38.97	40.75	34.11	0.422145	1.000000	-
Rv0974c	accD2	20	44.62	43.84	45.42	40.45	45.12	39.56	0.989965	1.000000	-
Rv0975c	fadE13	20	126.97	117.77	108.75	117.09	123.45	105.83	0.980987	1.000000	-
Rv0976c	-	20	184.71	165.93	184.17	174.22	164.26	183.21	0.982283	1.000000	-
Rv0977	PE_PGRS16	32	143.50	145.90	150.44	141.94	137.68	130.34	0.997345	1.000000	-
Rv0978c	PE_PGRS17	10	508.33	482.63	474.95	425.08	415.75	399.57	0.916847	1.000000	-
Rv0979c	-	2	92.84	74.00	54.77	209.42	200.30	112.03	0.151208	1.000000	-
Rv0979A	rpmF	2	8.55	45.67	24.95	23.47	16.23	63.35	0.446732	1.000000	-
Rv0980c	PE_PGRS18	17	384.66	356.45	366.71	378.93	305.25	297.81	0.854706	1.000000	-
Rv0981	mprA	11	364.00	385.63	361.95	351.14	345.84	350.67	0.994670	1.000000	-
Rv0982	mprB	22	17.54	24.97	22.42	33.14	27.12	23.52	0.980913	1.000000	-
Rv0983	pepD	19	67.51	76.28	51.80	65.03	61.97	81.42	0.593311	1.000000	-
Rv0984	moaB2	5	168.85	142.41	135.57	117.19	141.23	161.62	0.973211	1.000000	-
Rv0985c	mscL	9	79.59	86.75	59.60	65.24	68.18	114.95	0.218259	1.000000	-
Rv0986	-	25	22.54	21.21	29.78	26.89	26.89	32.11	0.443689	1.000000	-
Rv0987	-	94	25.58	22.51	28.83	29.18	26.71	31.30	0.349279	1.000000	-
Rv0988	-	41	11.69	18.73	16.44	17.16	17.62	18.20	0.419898	1.000000	-
Rv0989c	grcC2	18	163.95	157.22	162.69	156.72	153.30	182.55	0.978062	1.000000	-
Rv0990c	-	8	108.33	92.43	88.59	145.70	94.63	118.60	0.777471	1.000000	-
Rv0991c	-	3	383.66	339.19	304.67	302.94	352.44	400.65	0.976733	1.000000	-
Rv0992c	-	6	496.41	492.45	510.16	413.65	470.85	390.57	0.938065	1.000000	-
Rv0993	galU	14	0.39	0.00	0.00	0.00	0.00	0.00	0.603065	1.000000	-
Rv0994	moeA1	14	239.23	188.33	233.00	152.54	184.97	182.20	0.210140	1.000000	-
Rv0995	rimJ	5	109.44	79.37	90.60	66.15	110.63	107.16	0.636736	1.000000	-
Rv0996	-	17	253.41	250.67	212.95	238.13	257.48	211.40	0.875577	1.000000	-
Rv0997	-	6	220.06	179.26	212.18	193.76	256.34	161.36	0.897647	1.000000	-
Rv0998	-	13	69.09	72.12	73.01	68.31	71.90	80.22	0.991344	1.000000	-
Rv0999	-	11	274.11	300.56	241.49	257.65	300.86	283.94	0.925031	1.000000	-
Rv1000c	-	8	449.74	375.01	403.34	420.59	369.48	393.60	0.988660	1.000000	-
Rv1001	arcA	20	245.06	258.48	268.28	269.56	253.93	243.49	0.995166	1.000000	-
Rv1002c	-	24	17.84	23.26	13.91	13.47	13.73	15.52	0.213567	1.000000	-
Rv1003	-	8	79.32	116.01	109.62	94.71	96.83	132.62	0.090084	0.990181	-
Rv1004c	-	12	186.14	181.31	178.69	187.17	181.65	162.75	0.998411	1.000000	-
Rv1005c	pabB	24	35.06	58.66	40.96	46.52	37.99	36.22	0.921104	1.000000	-
Rv1006	-	41	174.97	225.91	157.31	236.84	244.08	196.99	0.000786	0.019610	-
Rv1007c	metG	31	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv1008	tatD	13	281.82	289.50	286.77	297.81	294.59	271.03	0.999465	1.000000	-
Rv1009	rpfB	12	129.36	114.47	112.88	159.87	138.50	120.21	0.796969	1.000000	-
Rv1010	ksgA	12	73.38	80.86	63.62	92.82	119.16	63.81	0.025378	0.373182	-
Rv1011	ispE	13	0.00	0.00	0.00	0.00	0.00	0.42	0.307837	1.000000	-
Rv1012	-	6	116.54	123.51	119.55	105.19	120.60	88.59	0.927902	1.000000	-
Rv1013	pks16	21	62.83	120.94	61.14	69.72	83.19	94.37	0.000260	0.007106	-
Rv1014c	pth	11	0.00	0.45	0.00	0.00	0.00	0.00	0.308134	1.000000	-
Rv1015c	rplY	10	44.61	45.73	36.24	76.14	73.98	51.02	0.455491	1.000000	-
Rv1016c	lpqT	6	70.17	95.95	64.82	112.24	99.58	96.33	0.869579	1.000000	-
Rv1017c	prsA	12	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv1018c	glmU	24	0.16	0.00	0.00	0.00	0.00	0.23	0.586592	1.000000	-
Rv1019	-	8	254.05	325.15	314.40	372.01	327.90	296.47	0.548347	1.000000	-
Rv1020	mfd	40	253.51	251.06	248.15	264.68	246.61	224.03	0.960657	1.000000	-
Rv1021	-	13	120.66	115.83	121.40	123.14	93.70	117.60	0.987420	1.000000	-
Rv1022	lpqU	14	85.11	78.48	84.07	81.43	83.88	79.97	0.999851	1.000000	-
Rv1023	eno	16	0.24	0.31	0.00	0.00	0.00	0.00	0.599167	1.000000	-
Rv1024	-	8	9.41	3.76	3.87	7.14	10.37	1.76	0.777649	1.000000	-
Rv1025	-	6	4.76	2.61	14.52	5.58	7.37	4.95	0.675847	1.000000	-
Rv1026	-	8	71.66	85.44	57.06	64.06	67.36	71.78	0.804408	1.000000	-
Rv1027c	kdpE	11	66.62	63.49	83.62	53.03	45.85	59.31	0.738917	1.000000	-
Rv1028c	kdpD	28	109.45	100.81	104.77	95.87	81.45	103.16	0.878801	1.000000	-
Rv1028A	kdpF	3	97.36	27.43	62.30	67.38	44.20	60.07	0.728233	1.000000	-
Rv1029	kdpA	28	128.12	114.23	129.38	118.37	120.55	132.81	0.981049	1.000000	-
Rv1030	kdpB	15	147.65	177.64	181.01	175.12	170.76	180.28	0.884683	1.000000	-
Rv1031	kdpC	10	114.13	112.62	131.62	130.70	141.30	108.25	0.772233	1.000000	-
Rv1032c	trcS	25	136.00	101.63	112.88	125.74	121.26	125.22	0.757262	1.000000	-
Rv1033c	trcR	15	151.74	185.01	180.90	179.83	183.91	191.66	0.972560	1.000000	-
Rv1034c	-	2	90.22	121.80	95.50	127.39	68.68	108.03	0.820212	1.000000	-
Rv1035c	-	4	161.69	144.49	84.45	108.95	115.71	98.25	0.411321	1.000000	-
Rv1036c	-	5	150.69	194.46	196.12	187.91	165.46	196.30	0.977354	1.000000	-
Rv1037c	esxI	4	469.31	431.33	434.96	420.88	441.02	447.13	0.998065	1.000000	-
Rv1038c	esxJ	3	258.47	251.88	283.66	194.00	255.60	253.06	0.567536	1.000000	-
Rv1039c	PPE15	24	132.59	153.39	127.36	137.15	143.71	158.20	0.839828	1.000000	-
Rv1040c	PE8	8	162.67	200.06	200.93	186.88	175.13	174.28	0.957921	1.000000	-
Rv1041c	-	18	264.39	251.65	238.31	263.82	224.27	232.91	0.991147	1.000000	-
Rv1042c	-	6	122.42	134.13	136.59	113.16	105.76	127.20	0.982724	1.000000	-
Rv1043c	-	14	72.42	79.56	89.14	80.44	85.80	92.08	0.927633	1.000000	-
Rv1044	-	13	26.93	33.26	22.90	33.08	27.62	29.34	0.995004	1.000000	-
Rv1045	-	12	226.75	218.26	249.33	239.78	251.08	243.79	0.996149	1.000000	-
Rv1046c	-	4	224.24	298.46	292.59	288.46	277.49	254.77	0.903654	1.000000	-
Rv1047	-	16	231.90	242.69	263.42	244.43	252.73	238.02	0.993901	1.000000	-
Rv1048c	-	24	160.52	186.92	152.50	173.27	167.68	175.52	0.924727	1.000000	-
Rv1049	-	4	250.84	259.27	263.78	294.59	288.35	243.65	0.978854	1.000000	-
Rv1050	-	12	55.74	77.59	80.71	71.26	62.76	72.79	0.660049	1.000000	-
Rv1051c	-	8	60.81	69.70	70.76	64.83	70.74	71.07	0.997647	1.000000	-
Rv1052	-	6	54.19	66.41	87.93	71.85	85.85	93.65	0.621032	1.000000	-
Rv1053c	-	6	40.04	59.29	59.36	57.61	61.69	70.80	0.739969	1.000000	-
Rv1054	-	5	93.88	141.52	149.09	132.68	141.86	149.90	0.904953	1.000000	-
Rv1055	-	3	22.95	35.58	72.83	91.62	84.18	56.32	0.019797	0.310992	-
Rv1056	-	22	200.50	205.24	200.90	213.79	188.34	189.79	0.989137	1.000000	-
Rv1057	-	19	222.74	218.94	226.96	228.78	225.92	219.35	0.999727	1.000000	-
Rv1058	fadD14	30	99.93	95.23	90.50	84.73	83.36	101.50	0.935090	1.000000	-
Rv1059	-	9	87.12	64.40	58.69	64.23	53.00	71.81	0.677441	1.000000	-
Rv1060	-	5	121.17	127.59	110.69	150.38	131.76	122.05	0.935665	1.000000	-
Rv1061	-	14	169.14	141.67	181.13	156.23	162.35	182.01	0.968485	1.000000	-
Rv1062	-	6	128.93	132.53	143.28	146.34	165.09	176.56	0.789777	1.000000	-
Rv1063c	-	15	254.86	234.96	256.22	219.79	205.36	196.89	0.538687	1.000000	-
Rv1064c	lpqV	6	101.00	118.57	132.66	109.80	113.52	142.59	0.627273	1.000000	-
Rv1065	-	10	390.76	422.92	411.04	359.67	366.47	329.50	0.862103	1.000000	-
Rv1066	-	4	134.07	148.75	208.74	148.40	124.70	138.87	0.906044	1.000000	-
Rv1067c	PE_PGRS19	15	296.03	278.23	282.82	268.33	242.70	264.36	0.965585	1.000000	-
Rv1068c	PE_PGRS20	13	193.50	186.74	145.96	172.17	166.80	165.26	0.972654	1.000000	-
Rv1069c	-	20	279.12	285.03	300.56	325.13	315.72	283.94	0.954824	1.000000	-
Rv1070c	echA8	8	176.21	153.83	158.91	186.57	155.87	120.02	0.567899	1.000000	-
Rv1071c	echA9	12	398.87	451.69	446.11	455.83	422.20	330.14	0.150599	1.000000	-
Rv1072	-	17	50.17	79.88	57.35	93.67	128.35	72.02	0.000003	0.000113	-
Rv1073	-	19	217.98	247.70	264.93	258.96	230.73	260.06	0.787444	1.000000	-
Rv1074c	fadA3	11	232.80	235.97	243.84	169.40	183.19	223.84	0.713914	1.000000	-
Rv1075c	-	18	222.15	218.71	226.11	230.61	217.26	198.54	0.989128	1.000000	-
Rv1076	lipU	21	83.58	93.80	93.01	83.82	85.60	97.25	0.993282	1.000000	-
Rv1077	cbs	27	177.36	170.70	188.82	179.92	163.62	179.13	0.978353	1.000000	-
Rv1078	pra	18	15.12	25.47	11.12	14.46	26.72	27.23	0.059170	0.724200	-
Rv1079	metB	18	111.71	105.31	108.07	107.57	103.41	103.86	0.999342	1.000000	-
Rv1080c	greA	9	7.37	12.97	3.50	10.62	18.87	9.59	0.034825	0.479144	-
Rv1081c	-	7	29.04	47.30	19.17	32.55	31.80	41.25	0.414421	1.000000	-
Rv1082	mca	13	134.79	140.34	138.58	128.12	157.53	159.57	0.977892	1.000000	-
Rv1083	-	3	34.81	32.25	30.42	34.17	46.35	48.14	0.625019	1.000000	-
Rv1084	-	26	191.34	175.12	187.85	173.12	174.58	176.64	0.992455	1.000000	-
Rv1085c	-	11	15.57	15.18	4.85	0.90	1.89	6.56	0.000000	0.000011	-
Rv1086	-	15	4.87	6.44	9.82	26.98	78.29	1.35	0.000000	0.000000	-
Rv1087	PE_PGRS21	21	376.77	359.73	321.99	350.87	332.60	338.53	0.977440	1.000000	-
Rv1087A	-	7	149.23	140.64	172.95	168.17	150.57	168.89	0.987383	1.000000	-
Rv1088	PE9	5	28.88	41.69	53.10	71.00	47.10	51.89	0.640001	1.000000	-
Rv1089	PE10	5	56.67	93.78	83.74	114.84	108.68	142.08	0.271128	1.000000	-
Rv1089A	celA2a	2	164.16	225.37	166.02	140.02	205.88	188.86	0.878219	1.000000	-
Rv1090	celA2b	7	150.96	166.11	155.58	123.41	146.37	129.86	0.969080	1.000000	-
Rv1091	PE_PGRS22	26	191.98	195.35	212.74	192.57	191.76	185.61	0.992272	1.000000	-
Rv1092c	coaA	19	2.92	3.21	1.33	0.97	3.09	1.73	0.900375	1.000000	-
Rv1093	glyA	14	3.40	4.70	6.27	0.70	3.55	4.05	0.094195	1.000000	-
Rv1094	desA2	12	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv1095	phoH2	13	135.58	104.18	124.67	115.05	102.32	116.86	0.942184	1.000000	-
Rv1096	-	19	68.47	63.15	66.61	58.93	62.97	59.74	0.993042	1.000000	-
Rv1097c	-	18	8.16	7.61	8.32	7.54	8.97	12.18	0.901686	1.000000	-
Rv1098c	fumC	13	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv1099c	glpX	13	140.13	143.16	144.11	143.28	151.95	136.65	0.998350	1.000000	-
Rv1100	-	9	35.69	54.37	45.31	48.20	27.77	51.10	0.612176	1.000000	-
Rv1101c	-	18	206.74	233.94	193.23	221.49	216.45	234.39	0.945997	1.000000	-
Rv1102c	-	8	95.07	86.46	86.11	86.15	102.34	93.98	0.999159	1.000000	-
Rv1103c	-	8	263.85	251.02	252.24	255.37	225.93	249.43	0.999510	1.000000	-
Rv1104	-	11	169.48	163.29	173.08	172.72	162.35	158.09	0.999192	1.000000	-
Rv1105	-	11	54.32	49.57	37.60	58.06	58.58	49.93	0.787636	1.000000	-
Rv1106c	-	18	207.35	227.61	231.17	227.60	227.48	245.35	0.950438	1.000000	-
Rv1107c	xseB	2	43.22	53.72	56.22	41.35	28.45	77.63	0.195170	1.000000	-
Rv1108c	xseA	10	153.94	183.85	161.13	178.44	168.12	120.47	0.651232	1.000000	-
Rv1109c	-	9	175.81	161.56	203.07	167.58	139.69	162.16	0.952426	1.000000	-
Rv1110	ispH	14	2.02	1.08	2.01	0.31	0.52	0.72	0.437765	1.000000	-
Rv1111c	-	24	87.96	77.94	86.93	96.86	89.51	76.83	0.967571	1.000000	-
Rv1112	-	10	149.45	169.78	184.66	142.34	129.23	159.05	0.988431	1.000000	-
Rv1113	-	2	100.19	129.62	170.62	140.24	188.58	146.91	0.915329	1.000000	-
Rv1114	-	3	129.06	196.68	156.58	158.96	197.95	170.21	0.506041	1.000000	-
Rv1115	-	18	134.12	130.95	111.09	149.26	129.68	108.24	0.977287	1.000000	-
Rv1116	-	3	51.05	27.20	34.42	62.19	61.35	64.64	0.512049	1.000000	-
Rv1116A	-	6	274.20	222.71	276.77	248.23	200.84	227.50	0.997557	1.000000	-
Rv1117	-	3	129.37	147.22	99.23	139.09	107.97	155.51	0.973144	1.000000	-
Rv1118c	-	12	317.66	300.25	309.84	307.28	254.76	245.16	0.795866	1.000000	-
Rv1119c	-	3	29.36	23.72	12.62	30.96	28.88	49.95	0.601062	1.000000	-
Rv1120c	-	4	136.29	67.20	123.90	88.12	103.78	118.62	0.857555	1.000000	-
Rv1121	zwf1	24	59.24	56.91	57.09	59.51	58.80	66.58	0.973017	1.000000	-
Rv1122	gnd2	14	5.72	4.34	17.24	0.93	10.51	0.00	0.075556	0.873819	-
Rv1123c	bpoB	9	221.40	240.72	221.79	237.69	208.41	201.11	0.992178	1.000000	-
Rv1124	ephC	12	110.97	73.17	88.85	90.61	89.52	70.57	0.935317	1.000000	-
Rv1125	-	23	52.32	52.86	63.61	58.07	49.77	37.40	0.405621	1.000000	-
Rv1126c	-	10	0.00	0.52	7.23	12.69	18.77	0.00	0.000010	0.000367	-
Rv1127c	ppdK	19	2.08	4.54	9.90	62.26	59.44	3.16	0.000000	0.000000	-
Rv1128c	-	29	62.05	48.17	71.73	64.64	44.99	42.56	0.087942	0.972790	-
Rv1129c	-	27	60.29	35.27	66.36	63.86	67.19	39.53	0.014803	0.245087	-
Rv1130	-	27	115.72	79.57	128.26	126.58	107.18	72.59	0.008505	0.160836	-
Rv1131	gltA1	16	54.42	36.25	64.35	53.84	63.42	41.63	0.138401	1.000000	-
Rv1132	-	26	63.75	62.62	68.25	57.79	58.66	79.28	0.756336	1.000000	-
Rv1133c	metE	35	0.00	0.14	0.00	0.00	0.00	0.00	0.306817	1.000000	-
Rv1134	-	5	98.67	111.05	88.91	115.35	119.68	82.43	0.925290	1.000000	-
Rv1135c	PPE16	25	111.42	90.48	114.37	86.11	103.05	105.45	0.848042	1.000000	-
Rv1135A	-	6	123.22	157.66	167.44	188.90	155.29	172.68	0.774142	1.000000	-
Rv1136	-	3	142.09	159.15	157.31	166.78	138.05	145.14	0.889267	1.000000	-
Rv1137c	-	2	281.28	219.72	307.36	309.88	211.08	216.43	0.377687	1.000000	-
Rv1138c	-	17	172.22	165.02	182.73	177.17	135.32	181.52	0.816649	1.000000	-
Rv1139c	-	13	124.26	138.36	160.30	119.80	113.50	137.91	0.846892	1.000000	-
Rv1140	-	11	124.63	104.93	119.16	137.89	126.60	101.00	0.933054	1.000000	-
Rv1141c	echA11	14	254.29	236.71	202.42	210.44	204.77	199.56	0.913720	1.000000	-
Rv1142c	echA10	8	148.34	137.10	141.86	143.25	146.46	141.66	0.999526	1.000000	-
Rv1143	mcr	15	163.29	161.07	178.37	169.97	165.40	161.85	0.997570	1.000000	-
Rv1144	-	11	252.23	207.70	235.92	214.38	227.72	219.82	0.929381	1.000000	-
Rv1145	mmpL13a	11	119.15	148.05	144.82	129.75	121.96	132.87	0.905620	1.000000	-
Rv1146	mmpL13b	23	212.92	211.74	212.13	201.58	216.39	219.33	0.997061	1.000000	-
Rv1147	-	9	132.28	78.16	122.60	114.54	117.05	104.12	0.738823	1.000000	-
Rv1148c	-	23	113.12	111.61	121.28	128.81	118.66	118.47	0.971016	1.000000	-
Rv1149	-	6	127.39	128.13	138.90	118.92	117.78	143.50	0.992699	1.000000	-
Rv1151c	-	9	419.52	352.71	373.64	360.70	360.24	313.74	0.798602	1.000000	-
Rv1152	-	5	95.84	79.93	87.39	110.25	92.14	115.47	0.844947	1.000000	-
Rv1153c	omt	19	185.64	161.76	176.90	185.13	183.01	204.91	0.960901	1.000000	-
Rv1154c	-	16	116.87	122.38	134.34	131.95	125.50	138.87	0.942661	1.000000	-
Rv1155	-	11	171.27	142.03	159.87	151.01	140.71	155.99	0.989679	1.000000	-
Rv1156	-	12	96.40	86.45	75.56	82.49	98.83	97.92	0.753735	1.000000	-
Rv1157c	-	8	118.09	214.05	132.74	265.48	249.21	128.44	0.309323	1.000000	-
Rv1158c	-	11	41.73	118.52	88.67	102.34	152.72	115.15	0.155957	1.000000	-
Rv1159	pimE	28	159.59	179.78	114.81	172.44	218.35	196.45	0.017549	0.281202	-
Rv1159A	phhB	13	75.50	105.05	78.17	108.53	93.77	94.85	0.798720	1.000000	-
Rv1160	mutT2	4	349.28	234.45	279.83	293.31	303.42	262.11	0.457616	1.000000	-
Rv1161	narG	75	107.45	113.04	107.04	101.67	106.75	106.58	0.982442	1.000000	-
Rv1162	narH	35	195.19	189.58	190.06	187.56	185.69	206.79	0.982878	1.000000	-
Rv1163	narJ	15	242.63	257.70	256.01	238.25	224.05	209.30	0.946023	1.000000	-
Rv1164	narI	18	324.56	248.89	251.80	273.47	240.62	238.52	0.636486	1.000000	-
Rv1165	typA	15	115.96	130.62	126.66	128.98	147.20	143.73	0.886134	1.000000	-
Rv1166	lpqW	23	0.33	0.00	0.00	0.21	0.32	0.00	0.801157	1.000000	-
Rv1167c	-	9	125.39	155.62	115.20	130.44	114.12	112.10	0.970060	1.000000	-
Rv1168c	PPE17	16	134.23	141.70	152.54	161.08	157.16	161.69	0.967687	1.000000	-
Rv1169c	PE11	3	131.89	151.15	121.76	127.82	122.43	148.82	0.996610	1.000000	-
Rv1170	mshB	11	138.05	148.87	178.99	84.71	95.64	131.42	0.199597	1.000000	-
Rv1171	-	6	302.94	240.31	280.30	303.20	287.07	294.54	0.989268	1.000000	-
Rv1172c	PE12	15	114.84	123.84	136.87	130.68	131.30	123.57	0.997899	1.000000	-
Rv1173	fbiC	43	99.49	95.31	124.83	81.73	89.26	78.65	0.014537	0.243714	-
Rv1174c	TB8.4	8	317.99	319.46	304.13	326.75	331.40	282.29	0.992427	1.000000	-
Rv1175c	fadH	28	171.93	166.40	176.79	163.94	176.08	155.80	0.981074	1.000000	-
Rv1176c	-	15	186.89	188.95	206.24	208.32	189.27	174.44	0.977153	1.000000	-
Rv1177	fdxC	7	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv1178	-	20	246.21	200.66	213.24	195.50	171.76	199.77	0.737583	1.000000	-
Rv1179c	-	41	208.98	217.70	195.40	204.59	191.03	176.89	0.853463	1.000000	-
Rv1180	pks3	25	71.44	53.12	57.17	56.93	55.73	66.47	0.792955	1.000000	-
Rv1181	pks4	70	83.03	72.65	90.39	76.16	76.21	70.78	0.366086	1.000000	-
Rv1182	papA3	40	58.79	57.14	68.43	59.51	54.12	48.36	0.487121	1.000000	-
Rv1183	mmpL10	52	41.99	38.71	49.08	36.25	42.66	41.45	0.531337	1.000000	-
Rv1184c	-	22	52.96	45.36	64.23	46.32	43.13	45.66	0.380576	1.000000	-
Rv1185c	fadD21	32	55.74	54.50	56.22	48.95	52.22	58.77	0.976080	1.000000	-
Rv1186c	-	18	70.89	67.25	80.79	72.97	72.78	71.58	0.994725	1.000000	-
Rv1187	rocA	24	61.46	77.27	94.95	76.72	62.67	79.37	0.621914	1.000000	-
Rv1188	-	22	54.50	54.30	54.19	59.23	63.16	64.29	0.968001	1.000000	-
Rv1189	sigI	8	87.99	69.94	60.22	70.55	62.74	65.71	0.807089	1.000000	-
Rv1190	-	9	102.80	112.56	111.57	88.92	109.98	108.19	0.996386	1.000000	-
Rv1191	-	9	171.12	129.38	137.63	157.34	160.86	132.90	0.872465	1.000000	-
Rv1192	-	14	81.10	80.60	81.80	72.05	76.57	90.86	0.971161	1.000000	-
Rv1193	fadD36	21	49.50	39.73	46.86	39.22	33.31	33.50	0.471633	1.000000	-
Rv1194c	-	18	55.72	59.53	58.21	24.19	18.87	50.61	0.000082	0.002476	-
Rv1195	PE13	5	220.98	170.97	209.17	126.30	103.90	132.17	0.767608	1.000000	-
Rv1196	PPE18	10	59.42	42.20	57.29	33.27	17.51	53.95	0.506976	1.000000	-
Rv1197	esxK	3	150.32	168.08	170.29	108.15	129.95	142.56	0.860055	1.000000	-
Rv1198	esxL	4	239.14	203.77	174.50	214.34	215.52	244.55	0.743141	1.000000	-
Rv1199c	-	16	241.20	247.65	260.21	264.39	219.72	247.08	0.964959	1.000000	-
Rv1200	-	29	183.71	190.48	168.18	198.81	194.45	181.83	0.911855	1.000000	-
Rv1201c	-	11	0.00	0.00	0.57	0.00	0.66	0.00	0.414691	1.000000	-
Rv1202	dapE	16	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv1203c	-	8	130.91	120.55	122.92	115.79	102.64	162.71	0.847847	1.000000	-
Rv1204c	-	16	370.24	331.58	349.58	317.66	356.45	308.58	0.820664	1.000000	-
Rv1205	-	13	154.91	125.91	154.75	163.98	148.86	164.64	0.938583	1.000000	-
Rv1206	fadD6	37	178.56	166.43	146.24	132.34	164.22	173.02	0.524178	1.000000	-
Rv1207	folP2	10	116.34	142.84	127.02	154.50	156.23	143.78	0.949647	1.000000	-
Rv1208	-	14	23.99	21.01	24.62	28.39	49.24	9.39	0.000071	0.002182	-
Rv1209	-	5	213.72	189.04	203.45	199.30	213.26	242.62	0.974202	1.000000	-
Rv1210	tagA	11	203.72	238.00	210.47	187.74	177.66	234.48	0.800066	1.000000	-
Rv1211	-	4	45.46	95.12	82.01	43.49	35.16	51.30	0.544588	1.000000	-
Rv1212c	-	32	145.23	138.24	164.51	120.65	111.60	117.27	0.253147	1.000000	-
Rv1213	glgC	30	133.74	131.43	110.59	149.42	147.81	137.92	0.744509	1.000000	-
Rv1214c	PE14	5	306.29	205.10	211.26	266.69	213.23	225.04	0.500746	1.000000	-
Rv1215c	-	26	158.05	159.21	147.84	147.86	154.83	171.82	0.988385	1.000000	-
Rv1216c	-	19	94.63	98.84	79.41	85.60	88.62	119.68	0.678312	1.000000	-
Rv1217c	-	20	97.58	87.11	87.34	101.02	107.90	95.15	0.891787	1.000000	-
Rv1218c	-	6	94.49	77.32	119.18	109.98	137.26	118.95	0.478691	1.000000	-
Rv1219c	-	10	154.05	154.27	199.74	131.65	159.00	136.40	0.687708	1.000000	-
Rv1220c	-	10	219.97	259.68	244.92	214.01	256.03	227.24	0.960308	1.000000	-
Rv1221	sigE	17	19.76	25.67	21.36	15.68	22.02	27.17	0.706403	1.000000	-
Rv1222	-	2	118.10	157.97	151.39	212.96	233.68	152.36	0.093053	1.000000	-
Rv1223	htrA	22	55.81	50.23	49.31	49.16	47.60	55.97	0.999810	1.000000	-
Rv1224	tatB	5	2.60	3.04	0.00	0.87	2.35	2.96	0.657853	1.000000	-
Rv1225c	-	6	173.10	182.62	177.69	160.65	220.17	135.65	0.669152	1.000000	-
Rv1226c	-	15	297.61	280.02	290.22	271.79	258.54	222.18	0.967647	1.000000	-
Rv1227c	-	6	165.34	224.55	179.49	162.55	164.35	182.11	0.881055	1.000000	-
Rv1228	lpqX	9	151.78	186.35	183.19	188.61	190.34	221.91	0.803190	1.000000	-
Rv1229c	mrp	16	32.31	47.55	38.57	32.24	21.88	33.45	0.956061	1.000000	-
Rv1230c	-	20	182.84	198.82	220.61	198.17	197.31	193.89	0.959871	1.000000	-
Rv1231c	-	7	155.12	125.83	166.56	165.77	164.32	138.45	0.945853	1.000000	-
Rv1232c	-	11	146.97	128.49	129.50	138.39	141.15	135.86	0.990051	1.000000	-
Rv1233c	-	19	144.82	139.97	134.86	133.85	129.67	161.63	0.930737	1.000000	-
Rv1234	-	9	32.96	54.13	37.86	50.83	51.12	62.40	0.233262	1.000000	-
Rv1235	lpqY	30	70.45	55.67	59.03	64.26	65.08	77.69	0.692930	1.000000	-
Rv1236	sugA	19	126.09	119.92	132.20	136.23	129.06	137.16	0.992624	1.000000	-
Rv1237	sugB	12	46.75	58.36	41.19	58.38	47.68	55.34	0.858799	1.000000	-
Rv1238	sugC	25	51.94	52.82	53.88	51.52	62.19	54.93	0.961037	1.000000	-
Rv1239c	corA	25	127.22	122.68	99.90	91.96	92.36	117.56	0.549387	1.000000	-
Rv1240	mdh	5	1.87	1.04	5.04	0.00	0.00	0.00	0.056853	0.702298	-
Rv1241	-	1	147.34	376.00	283.84	102.87	187.60	186.36	1.000000	1.000000	TA sites <= 1
Rv1242	-	9	277.81	295.67	342.03	235.35	299.14	267.07	0.487261	1.000000	-
Rv1243c	PE_PGRS23	19	229.73	217.03	208.79	240.86	211.33	196.97	0.908721	1.000000	-
Rv1244	lpqZ	8	102.74	134.00	84.93	116.91	100.91	74.01	0.251467	1.000000	-
Rv1245c	-	14	100.22	92.94	102.99	94.92	104.27	89.49	0.992887	1.000000	-
Rv1246c	-	7	143.14	137.98	131.33	159.71	144.41	159.02	0.991673	1.000000	-
Rv1247c	-	6	56.50	97.01	62.02	54.78	90.38	70.36	0.261518	1.000000	-
Rv1248c	kgd	46	8.98	7.61	7.50	1.43	1.77	7.52	0.000000	0.000000	-
Rv1249c	-	12	286.22	220.81	250.59	255.76	210.55	203.16	0.530666	1.000000	-
Rv1250	-	31	91.76	103.58	77.63	91.00	96.47	115.41	0.234651	1.000000	-
Rv1251c	-	61	109.77	113.49	102.87	116.43	106.58	93.33	0.507806	1.000000	-
Rv1252c	lprE	7	215.59	213.45	186.69	201.75	193.01	221.07	0.987394	1.000000	-
Rv1253	deaD	35	124.20	127.56	128.60	142.31	127.11	110.74	0.791277	1.000000	-
Rv1254	-	26	3.75	7.25	1.92	2.52	7.12	5.42	0.007701	0.147024	-
Rv1255c	-	10	85.73	95.24	118.86	91.47	92.57	69.36	0.731798	1.000000	-
Rv1256c	cyp130	16	236.34	241.42	274.89	241.00	255.86	233.96	0.977868	1.000000	-
Rv1257c	-	16	125.42	111.66	115.19	134.10	93.94	120.08	0.953274	1.000000	-
Rv1258c	-	22	204.49	200.84	202.50	220.56	201.97	214.27	0.996357	1.000000	-
Rv1259	-	14	78.48	71.83	56.20	71.65	68.83	71.38	0.904955	1.000000	-
Rv1260	-	28	69.80	53.69	57.11	49.95	56.95	51.76	0.349901	1.000000	-
Rv1261c	-	11	121.44	126.44	137.96	122.63	103.50	121.86	0.891461	1.000000	-
Rv1262c	-	4	67.54	94.75	71.84	76.99	91.06	62.78	0.953031	1.000000	-
Rv1263	amiB2	22	119.87	96.49	96.66	98.13	108.08	80.23	0.372290	1.000000	-
Rv1264	-	13	244.18	232.55	202.61	219.53	222.74	259.99	0.957630	1.000000	-
Rv1265	-	11	13.47	12.07	12.77	14.93	14.60	11.40	0.979217	1.000000	-
Rv1266c	pknH	29	133.50	147.97	144.17	144.57	147.63	139.05	0.984765	1.000000	-
Rv1267c	embR	20	156.41	178.28	171.32	167.75	166.80	169.14	0.992226	1.000000	-
Rv1268c	-	11	191.00	167.79	174.76	171.93	192.83	164.14	0.997724	1.000000	-
Rv1269c	-	8	92.67	98.12	88.97	93.52	95.98	96.57	0.999733	1.000000	-
Rv1270c	lprA	11	92.23	74.62	72.01	79.67	74.47	101.28	0.861035	1.000000	-
Rv1271c	-	7	43.25	35.01	58.08	37.06	38.68	30.49	0.823930	1.000000	-
Rv1272c	-	30	39.65	47.35	41.10	60.92	56.97	55.21	0.481756	1.000000	-
Rv1273c	-	32	86.84	99.12	77.36	109.83	115.34	70.21	0.121173	1.000000	-
Rv1274	lprB	4	12.78	17.80	14.76	13.18	14.66	6.41	0.670335	1.000000	-
Rv1275	lprC	6	6.96	21.23	9.37	14.87	27.23	9.21	0.010658	0.192380	-
Rv1276c	-	7	66.01	64.85	71.03	50.92	84.52	62.87	0.811073	1.000000	-
Rv1277	-	20	108.99	126.20	114.35	104.07	108.27	108.02	0.914800	1.000000	-
Rv1278	-	28	119.27	118.39	125.53	131.33	132.93	124.76	0.988048	1.000000	-
Rv1279	-	30	116.03	102.40	114.52	118.08	118.60	117.77	0.977159	1.000000	-
Rv1280c	oppA	26	109.08	119.57	132.49	154.76	147.88	102.99	0.134144	1.000000	-
Rv1281c	oppD	28	47.10	58.14	55.04	59.62	55.49	42.88	0.686424	1.000000	-
Rv1282c	oppC	16	56.31	64.30	79.74	82.86	89.24	70.78	0.338754	1.000000	-
Rv1283c	oppB	21	80.61	116.23	93.39	125.20	87.36	71.68	0.013087	0.224386	-
Rv1284	-	6	13.58	5.93	19.22	21.12	43.62	26.12	0.293149	1.000000	-
Rv1285	cysD	16	48.04	53.90	43.66	45.22	37.33	43.74	0.927485	1.000000	-
Rv1286	cysN	34	53.84	41.84	62.70	40.62	39.09	49.25	0.136145	1.000000	-
Rv1287	-	12	114.42	118.01	166.18	156.06	166.41	150.24	0.456453	1.000000	-
Rv1288	-	33	119.82	113.37	118.58	119.02	124.46	127.94	0.987941	1.000000	-
Rv1289	-	10	106.78	81.92	81.83	102.40	118.31	104.81	0.813119	1.000000	-
Rv1290c	-	34	203.43	214.86	197.21	209.01	211.90	193.67	0.991978	1.000000	-
Rv1290A	-	7	19.32	26.78	20.16	28.73	30.57	37.26	0.759517	1.000000	-
Rv1291c	-	3	171.32	207.51	221.73	219.01	190.09	187.76	0.912344	1.000000	-
Rv1292	argS	34	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv1293	lysA	27	0.48	1.68	0.57	2.92	2.77	1.52	0.050057	0.632049	-
Rv1294	thrA	24	0.16	0.00	0.00	0.00	0.00	0.00	0.601074	1.000000	-
Rv1295	thrC	20	10.67	13.70	12.12	12.11	15.56	6.68	0.983935	1.000000	-
Rv1296	thrB	15	0.00	0.00	0.42	0.00	0.00	0.00	0.307620	1.000000	-
Rv1297	rho	22	1.19	0.00	0.29	0.86	0.33	1.13	0.570565	1.000000	-
Rv1298	rpmE	6	4.02	3.40	2.10	2.27	4.82	0.90	0.678943	1.000000	-
Rv1299	prfA	14	0.00	0.00	0.45	0.00	0.00	0.00	0.307721	1.000000	-
Rv1300	hemK	14	18.52	18.88	10.49	8.74	6.58	19.43	0.000722	0.018339	-
Rv1301	-	10	10.30	10.63	10.66	4.25	5.50	10.51	0.275316	1.000000	-
Rv1302	rfe	19	29.96	28.49	20.88	25.13	28.72	25.10	0.991297	1.000000	-
Rv1303	-	4	124.14	88.95	80.57	70.09	79.90	68.68	0.974984	1.000000	-
Rv1304	atpB	10	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv1305	atpE	7	0.00	0.71	0.00	0.00	0.00	0.00	0.309247	1.000000	-
Rv1306	atpF	3	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv1307	atpH	20	0.96	0.25	0.00	2.13	2.75	3.51	0.418928	1.000000	-
Rv1308	atpA	25	2.13	2.05	1.12	1.32	2.64	1.62	0.967318	1.000000	-
Rv1309	atpG	18	0.00	0.28	0.00	0.00	0.40	0.00	0.408040	1.000000	-
Rv1310	atpD	20	0.00	0.00	0.00	0.24	0.00	0.24	0.632843	1.000000	-
Rv1311	atpC	1	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	TA sites <= 1
Rv1312	-	10	46.38	62.68	58.03	80.35	117.32	50.55	0.000168	0.004709	-
Rv1313c	-	16	252.08	246.06	233.66	239.96	217.94	225.41	0.996683	1.000000	-
Rv1314c	-	15	94.06	77.44	84.41	89.14	77.96	85.73	0.946572	1.000000	-
Rv1315	murA	16	0.24	0.00	0.00	0.00	0.00	0.00	0.602465	1.000000	-
Rvnr01	rrs	62	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv1316c	ogt	9	105.70	126.62	90.75	121.06	127.89	137.34	0.896521	1.000000	-
Rv1317c	alkA	13	184.36	142.98	170.89	163.59	147.38	160.46	0.795306	1.000000	-
Rv1318c	-	19	187.39	194.41	173.75	192.85	188.71	177.42	0.995174	1.000000	-
Rv1319c	-	28	153.28	148.77	145.25	154.82	162.79	165.31	0.962418	1.000000	-
Rv1320c	-	29	146.25	163.44	142.42	152.49	158.16	159.19	0.942554	1.000000	-
Rv1321	-	12	228.48	184.09	207.39	187.07	208.46	189.45	0.969908	1.000000	-
Rv1322	-	5	214.38	256.41	264.82	228.62	223.61	220.25	0.997357	1.000000	-
Rv1322A	-	6	89.00	73.95	84.40	89.84	83.08	77.44	0.992044	1.000000	-
Rv1323	fadA4	14	152.80	144.29	148.59	140.74	125.78	134.27	0.933455	1.000000	-
Rv1324	-	6	13.49	13.57	8.89	17.87	20.61	20.50	0.818702	1.000000	-
Rv1325c	PE_PGRS24	10	99.48	87.82	90.27	113.48	96.62	75.44	0.869884	1.000000	-
Rv1326c	glgB	42	0.00	0.00	0.00	0.00	0.00	0.11	0.306717	1.000000	-
Rv1327c	glgE	39	0.00	0.00	0.00	0.00	1.34	0.00	0.135385	1.000000	-
Rv1328	glgP	45	109.41	130.08	112.73	136.99	142.78	131.66	0.344268	1.000000	-
Rv1329c	dinG	24	97.13	144.09	102.17	113.08	113.37	110.31	0.575042	1.000000	-
Rv1330c	-	23	315.73	303.37	328.53	285.89	279.95	275.03	0.985672	1.000000	-
Rv1331	clpS	5	48.28	81.53	79.82	90.10	102.15	99.93	0.205649	1.000000	-
Rv1332	-	7	77.34	97.48	72.03	172.16	144.89	106.03	0.009522	0.176704	-
Rv1333	-	13	117.25	168.63	109.89	139.56	154.49	154.89	0.320527	1.000000	-
Rv1334	-	12	124.78	219.51	178.36	215.58	190.21	171.26	0.399820	1.000000	-
Rv1335	-	5	96.37	137.44	107.47	139.00	133.76	162.83	0.668450	1.000000	-
Rv1336	cysM	19	138.07	175.59	155.50	219.05	244.78	177.60	0.022960	0.349662	-
Rv1337	-	13	155.13	216.53	152.32	285.66	302.22	232.22	0.000063	0.001980	-
Rv1338	murI	16	0.97	0.96	7.42	31.58	92.04	0.34	0.000000	0.000000	-
Rv1339	-	19	2.71	10.66	4.28	70.69	77.06	5.48	0.000000	0.000000	-
Rv1340	rph	13	54.29	102.23	59.86	134.63	135.22	67.91	0.000036	0.001181	-
Rv1341	-	5	117.52	187.61	139.81	204.64	160.72	151.35	0.491947	1.000000	-
Rv1342c	-	5	11.21	14.23	3.78	3.68	6.15	20.26	0.010294	0.188722	-
Rv1343c	lprD	12	26.00	43.22	25.23	49.77	47.67	39.91	0.279384	1.000000	-
Rv1344	-	10	143.67	229.30	111.89	250.73	235.42	205.69	0.064579	0.773787	-
Rv1345	fadD33	23	137.30	154.05	154.07	172.03	185.05	167.98	0.824122	1.000000	-
Rv1346	fadE14	14	89.05	91.22	87.25	103.28	85.68	79.78	0.884107	1.000000	-
Rv1347c	-	14	13.74	7.27	8.93	8.72	12.31	9.73	0.701956	1.000000	-
Rv1348	-	38	4.86	11.77	23.36	173.41	148.18	7.91	0.000000	0.000000	-
Rv1349	-	19	5.03	17.60	36.37	110.64	88.23	8.18	0.000000	0.000000	-
Rv1350	fabG	15	27.99	28.25	26.04	27.76	28.28	30.55	0.995159	1.000000	-
Rv1351	-	10	145.77	122.78	146.80	112.56	138.95	131.47	0.926084	1.000000	-
Rv1352	-	5	130.02	110.28	116.88	109.14	110.63	174.34	0.337702	1.000000	-
Rv1353c	-	13	122.86	81.96	103.61	99.61	90.79	89.40	0.485417	1.000000	-
Rv1354c	-	44	66.06	61.87	63.83	67.94	57.23	57.71	0.907874	1.000000	-
Rv1355c	moeY	40	43.31	50.25	47.33	43.92	51.68	44.94	0.904741	1.000000	-
Rv1356c	-	28	75.85	75.44	74.76	86.40	80.96	75.93	0.983960	1.000000	-
Rv1357c	-	13	93.83	117.01	130.61	95.89	104.34	117.85	0.692173	1.000000	-
Rv1358	-	73	98.22	95.29	95.87	99.77	98.99	97.36	0.998480	1.000000	-
Rv1359	-	17	83.13	90.37	104.67	92.81	98.64	85.72	0.748985	1.000000	-
Rv1360	-	14	245.90	186.04	188.95	204.67	185.21	198.25	0.656369	1.000000	-
Rv1361c	PPE19	14	53.56	53.70	73.72	62.01	50.32	59.86	0.937890	1.000000	-
Rv1362c	-	14	90.78	107.12	83.32	103.86	105.61	116.22	0.704723	1.000000	-
Rv1363c	-	8	101.21	96.34	118.76	94.85	94.61	104.32	0.964343	1.000000	-
Rv1364c	-	32	113.50	152.10	125.63	165.54	157.33	113.02	0.251942	1.000000	-
Rv1365c	rsfA	5	152.52	176.19	158.48	207.42	132.63	177.04	0.369289	1.000000	-
Rv1366	-	19	60.09	53.37	66.18	52.69	57.05	60.74	0.990024	1.000000	-
Rv1367c	-	16	126.08	111.75	124.59	107.13	116.50	127.84	0.923192	1.000000	-
Rv1368	lprF	7	92.22	90.00	80.86	107.60	91.65	108.55	0.951605	1.000000	-
Rv1369c	-	23	309.51	314.77	328.18	333.92	301.45	303.36	0.980435	1.000000	-
Rv1370c	-	4	221.69	231.83	231.10	236.79	252.34	181.54	0.948505	1.000000	-
Rv1371	-	30	32.28	35.12	40.13	36.38	27.52	37.58	0.545517	1.000000	-
Rv1372	-	18	52.13	67.79	56.16	53.65	47.76	56.37	0.830943	1.000000	-
Rv1373	-	19	139.43	160.19	160.24	147.19	155.79	138.66	0.913337	1.000000	-
Rv1374c	-	14	183.85	192.27	187.40	180.28	202.96	205.05	0.960688	1.000000	-
Rv1375	-	22	167.71	180.59	175.06	179.60	181.20	174.85	0.997204	1.000000	-
Rv1376	-	16	168.56	166.45	156.89	162.47	151.35	164.83	0.998209	1.000000	-
Rv1377c	-	13	95.25	105.11	112.04	104.94	117.70	117.17	0.811599	1.000000	-
Rv1378c	-	24	165.70	150.31	159.53	150.33	156.97	161.39	0.994309	1.000000	-
Rv1379	pyrR	7	39.09	37.00	44.24	26.67	38.93	22.02	0.961584	1.000000	-
Rv1380	pyrB	13	0.00	0.00	0.00	0.00	0.56	0.36	0.405481	1.000000	-
Rv1381	pyrC	11	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv1382	-	6	5.32	3.44	3.15	0.00	4.21	1.68	0.173994	1.000000	-
Rv1383	carA	12	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv1384	carB	46	0.00	0.11	0.00	0.20	0.16	0.00	0.503677	1.000000	-
Rv1385	pyrF	6	36.71	45.02	31.35	48.97	39.52	28.35	0.992536	1.000000	-
Rv1386	PE15	6	28.06	41.53	50.09	76.91	92.48	49.75	0.023517	0.356779	-
Rv1387	PPE20	26	88.74	131.79	107.78	232.45	236.85	122.27	0.000000	0.000000	-
Rv1388	mihF	7	28.58	21.20	20.56	45.98	31.44	26.52	0.380819	1.000000	-
Rv1389	gmk	6	0.00	0.00	1.05	0.00	0.00	0.00	0.309760	1.000000	-
Rv1390	rpoZ	7	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv1391	dfp	20	7.02	5.86	7.02	9.98	3.92	4.40	0.940093	1.000000	-
Rv1392	metK	19	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv1393c	-	27	168.68	163.62	158.50	168.58	174.19	161.32	0.997451	1.000000	-
Rv1394c	cyp132	19	102.78	123.95	94.72	117.15	111.20	115.72	0.866888	1.000000	-
Rv1395	-	17	126.02	120.04	113.04	135.52	121.85	131.61	0.975236	1.000000	-
Rv1396c	PE_PGRS25	12	155.78	143.33	180.01	166.20	167.39	147.51	0.960035	1.000000	-
Rv1397c	-	6	98.32	108.78	89.18	117.63	132.72	128.78	0.897018	1.000000	-
Rv1398c	-	4	188.91	218.57	200.99	217.61	224.52	201.22	0.898710	1.000000	-
Rv1399c	lipH	15	122.50	137.90	148.07	156.25	128.45	135.57	0.864197	1.000000	-
Rv1400c	lipI	18	83.76	62.89	78.98	68.44	72.00	57.72	0.653629	1.000000	-
Rv1401	-	8	28.77	19.67	29.24	19.29	24.48	31.38	0.411033	1.000000	-
Rv1402	priA	27	4.13	6.77	2.68	2.33	4.31	2.53	0.097987	1.000000	-
Rv1403c	-	16	78.72	74.21	52.01	85.32	96.16	77.59	0.239570	1.000000	-
Rv1404	-	7	25.32	23.21	26.30	29.95	32.61	43.72	0.627011	1.000000	-
Rv1405c	-	12	215.35	182.90	178.55	181.52	188.30	167.25	0.974359	1.000000	-
Rv1406	fmt	9	9.48	11.91	2.80	5.77	9.02	6.66	0.146171	1.000000	-
Rv1407	fmu	21	181.61	207.23	219.69	211.30	223.77	212.55	0.891874	1.000000	-
Rv1408	rpe	13	53.96	44.89	35.21	37.88	41.02	35.47	0.801588	1.000000	-
Rv1409	ribG	13	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv1410c	-	30	40.59	82.74	62.83	72.18	108.26	56.36	0.000008	0.000293	-
Rv1411c	lprG	9	7.70	20.79	12.87	24.39	38.82	16.51	0.000043	0.001387	-
Rv1412	ribC	7	0.55	2.92	3.11	2.01	5.81	1.44	0.499475	1.000000	-
Rv1413	-	6	441.19	393.31	389.45	428.29	387.79	317.96	0.781330	1.000000	-
Rv1414	-	4	178.73	246.62	165.29	175.58	160.11	169.89	0.857591	1.000000	-
Rv1415	ribA2	15	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv1416	ribH	4	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv1417	-	8	73.60	61.31	92.10	121.21	98.02	71.65	0.819807	1.000000	-
Rv1418	lprH	14	96.35	98.24	103.64	102.30	94.53	105.09	0.997700	1.000000	-
Rv1419	-	5	75.40	72.37	83.85	70.12	74.18	78.30	0.997268	1.000000	-
Rv1420	uvrC	29	79.77	83.32	76.63	89.86	91.13	78.85	0.901095	1.000000	-
Rv1421	-	20	86.45	85.49	67.06	95.71	85.40	86.92	0.740597	1.000000	-
Rv1422	-	11	203.06	217.48	255.91	217.09	226.92	162.69	0.805095	1.000000	-
Rv1423	whiA	11	0.00	0.45	0.57	1.28	1.07	0.43	0.513674	1.000000	-
Rv1424c	-	19	63.15	72.46	54.04	65.92	75.41	63.53	0.650112	1.000000	-
Rv1425	-	18	151.41	164.97	153.09	158.06	159.19	143.07	0.994927	1.000000	-
Rv1426c	lipO	28	97.14	79.35	62.04	73.38	82.30	75.15	0.192777	1.000000	-
Rv1427c	fadD12	19	68.49	80.50	71.35	77.77	61.13	64.20	0.915450	1.000000	-
Rv1428c	-	18	57.27	79.06	72.79	66.02	74.18	69.15	0.932019	1.000000	-
Rv1429	-	22	118.15	118.45	124.56	125.38	115.32	110.93	0.993373	1.000000	-
Rv1430	PE16	39	75.58	66.32	73.92	77.10	77.56	76.15	0.973383	1.000000	-
Rv1431	-	25	41.89	33.50	53.08	24.28	31.47	33.63	0.043535	0.567656	-
Rv1432	-	16	159.92	59.48	168.19	6.52	13.53	39.81	0.000000	0.000003	-
Rv1433	-	17	182.76	193.18	191.88	192.70	155.03	177.63	0.934955	1.000000	-
Rv1434	-	1	128.27	143.20	118.70	221.97	168.65	114.30	1.000000	1.000000	TA sites <= 1
Rv1435c	-	16	156.15	137.19	163.00	127.10	139.99	133.51	0.953548	1.000000	-
Rv1436	gap	14	3.76	1.83	0.90	0.00	0.00	0.00	0.000310	0.008404	-
Rv1437	pgk	16	3.68	5.08	2.54	1.15	0.45	1.94	0.172734	1.000000	-
Rv1438	tpiA	15	0.00	0.35	0.00	0.00	0.00	0.00	0.307620	1.000000	-
Rv1439c	-	7	76.15	95.93	85.29	87.06	72.46	73.72	0.965469	1.000000	-
Rv1440	secG	5	16.98	13.14	13.08	19.88	21.28	8.24	0.960800	1.000000	-
Rv1441c	PE_PGRS26	18	176.55	203.39	172.83	175.06	163.09	151.16	0.919237	1.000000	-
Rv1442	bisC	37	170.26	162.56	180.94	177.96	169.42	169.38	0.995040	1.000000	-
Rv1443c	-	2	100.85	104.80	59.35	120.25	84.80	99.88	0.900046	1.000000	-
Rv1444c	-	3	94.38	49.48	74.93	74.58	40.93	65.10	0.320385	1.000000	-
Rv1445c	devB	9	95.54	91.99	73.73	67.49	68.05	65.91	0.887211	1.000000	-
Rv1446c	opcA	15	70.81	49.18	90.80	42.83	54.66	71.98	0.045622	0.587826	-
Rv1447c	zwf2	19	77.47	80.59	96.38	79.40	78.77	73.64	0.913302	1.000000	-
Rv1448c	tal	13	80.08	94.40	95.94	91.31	72.07	73.23	0.978217	1.000000	-
Rv1449c	tkt	26	0.89	3.32	2.16	1.60	1.53	1.74	0.840211	1.000000	-
Rv1450c	PE_PGRS27	32	127.58	121.64	135.01	126.47	134.97	116.53	0.993065	1.000000	-
Rv1451	ctaB	16	10.61	5.42	9.35	6.85	8.74	10.40	0.940761	1.000000	-
Rv1452c	PE_PGRS28	17	282.16	244.85	241.05	251.45	280.73	219.39	0.855522	1.000000	-
Rv1453	-	11	271.85	265.44	257.71	252.99	234.63	255.48	0.995905	1.000000	-
Rv1454c	qor	16	262.62	259.34	257.65	250.70	282.79	253.90	0.993571	1.000000	-
Rv1455	-	12	225.61	216.18	201.43	226.97	220.54	214.22	0.999578	1.000000	-
Rv1456c	-	15	9.95	20.41	12.31	6.84	6.80	9.72	0.097180	1.000000	-
Rv1457c	-	8	56.52	75.31	65.59	70.90	73.49	61.52	0.907525	1.000000	-
Rv1458c	-	14	198.40	210.72	166.19	217.39	182.28	217.33	0.797395	1.000000	-
Rv1459c	-	26	37.00	41.97	35.27	40.12	39.55	40.59	0.999428	1.000000	-
Rv1460	-	9	99.61	50.90	60.86	30.75	36.08	50.04	0.011920	0.208606	-
Rv1461	-	59	0.00	0.00	0.00	0.00	0.00	0.08	0.306573	1.000000	-
Rv1462	-	14	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv1463	-	12	0.00	0.00	0.00	0.00	0.00	0.45	0.307973	1.000000	-
Rv1464	csd	15	3.51	0.67	4.63	0.32	0.00	0.72	0.009339	0.174942	-
Rv1465	-	8	19.85	15.83	18.77	10.49	16.93	13.93	0.947675	1.000000	-
Rv1466	-	1	82.60	116.75	40.75	23.27	55.95	60.80	1.000000	1.000000	TA sites <= 1
Rv1467c	fadE15	28	147.42	166.98	145.97	135.85	161.96	160.54	0.783226	1.000000	-
Rv1468c	PE_PGRS29	10	127.07	120.77	116.88	137.75	165.51	120.16	0.805186	1.000000	-
Rv1469	ctpD	20	124.90	139.79	114.45	122.83	127.27	126.18	0.977881	1.000000	-
Rv1470	trxA	5	120.21	144.54	120.79	130.53	111.38	137.80	0.995719	1.000000	-
Rv1471	trxB1	3	212.62	261.30	278.33	233.73	154.27	184.54	0.817856	1.000000	-
Rv1472	echA12	15	139.52	145.47	157.17	164.71	159.13	141.95	0.955683	1.000000	-
Rv1473	-	25	124.34	139.10	118.45	127.88	146.16	129.56	0.875242	1.000000	-
Rv1473A	-	4	235.33	266.66	215.93	289.34	248.78	318.49	0.811774	1.000000	-
Rv1474c	-	8	208.62	196.47	239.34	132.35	134.29	163.75	0.799297	1.000000	-
Rv1475c	acn	56	2.32	3.03	1.95	1.90	2.48	2.76	0.995976	1.000000	-
Rv1476	-	6	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv1477	-	24	29.77	34.31	35.60	39.34	52.33	27.08	0.613814	1.000000	-
Rv1478	-	9	190.95	180.28	186.88	161.83	178.50	170.61	0.989095	1.000000	-
Rv1479	moxR1	14	0.00	0.00	0.00	0.00	0.84	0.00	0.041247	0.543148	-
Rv1480	-	6	26.36	31.27	49.41	42.15	49.17	45.90	0.977455	1.000000	-
Rv1481	-	13	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv1482c	-	14	219.62	239.50	211.02	228.39	215.73	197.09	0.991695	1.000000	-
Rv1483	fabG1	13	0.00	0.00	0.00	0.00	0.35	0.00	0.307837	1.000000	-
Rv1484	inhA	9	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv1485	hemH	25	0.98	5.50	3.37	68.94	83.29	11.08	0.000000	0.000000	-
Rv1486c	-	8	218.03	230.30	239.64	228.36	244.06	238.70	0.998230	1.000000	-
Rv1487	-	3	221.80	151.76	115.45	186.29	92.38	128.71	0.235911	1.000000	-
Rv1488	-	15	290.23	270.24	242.22	231.22	227.46	271.11	0.782518	1.000000	-
Rv1489	-	6	284.07	290.04	305.45	299.54	299.45	291.19	0.999924	1.000000	-
Rv1489A	-	4	249.04	241.01	205.89	235.55	255.45	190.23	0.953790	1.000000	-
Rv1490	-	38	29.99	32.73	30.80	25.47	37.85	33.25	0.450616	1.000000	-
Rv1491c	-	15	151.87	147.59	134.27	158.20	153.71	157.66	0.989994	1.000000	-
Rv1492	mutA	16	154.70	170.74	212.63	184.74	175.78	157.66	0.664427	1.000000	-
Rv1493	mutB	31	166.80	167.96	164.29	161.51	156.22	158.21	0.999760	1.000000	-
Rv1494	-	8	181.35	143.07	180.37	178.30	168.62	145.57	0.963711	1.000000	-
Rv1495	-	6	165.49	111.62	190.48	122.74	127.52	167.82	0.092192	1.000000	-
Rv1496	-	8	143.76	136.35	130.81	165.98	122.39	139.14	0.848365	1.000000	-
Rv1497	lipL	16	256.85	219.51	209.13	188.60	219.35	217.32	0.923770	1.000000	-
Rv1498c	-	16	81.77	99.11	78.18	82.42	88.22	120.51	0.106446	1.000000	-
Rv1498A	-	3	218.09	266.75	196.11	301.62	245.42	281.66	0.129605	1.000000	-
Rv1499	-	5	200.72	163.56	190.96	160.78	185.17	183.99	0.964332	1.000000	-
Rv1500	-	36	106.56	96.84	107.27	109.50	96.10	104.74	0.999412	1.000000	-
Rv1501	-	33	40.97	45.31	31.96	49.84	52.14	55.84	0.300929	1.000000	-
Rv1502	-	33	35.57	46.52	43.40	43.74	40.00	47.01	0.670400	1.000000	-
Rv1503c	-	18	181.26	180.11	179.78	170.95	164.96	162.38	0.997707	1.000000	-
Rv1504c	-	12	287.60	249.88	301.49	306.21	291.27	283.56	0.977245	1.000000	-
Rv1505c	-	27	39.02	36.79	37.79	44.43	42.42	40.61	0.982863	1.000000	-
Rv1506c	-	20	70.11	74.54	79.82	84.65	86.00	70.93	0.894049	1.000000	-
Rv1507c	-	29	8.93	15.06	13.59	13.54	14.72	13.39	0.720451	1.000000	-
Rv1507A	-	18	31.22	44.19	45.24	37.36	48.14	54.79	0.680632	1.000000	-
Rv1508c	-	43	137.85	141.91	129.61	150.67	145.47	157.66	0.912759	1.000000	-
Rv1508A	-	13	105.44	160.19	130.32	124.19	117.58	102.26	0.418617	1.000000	-
Rv1509	-	20	54.13	44.14	32.34	55.47	56.69	46.22	0.729727	1.000000	-
Rv1510	-	23	318.41	296.05	291.11	304.79	316.32	283.50	0.958436	1.000000	-
Rv1511	gmdA	20	238.12	269.80	227.97	250.92	253.05	234.96	0.967179	1.000000	-
Rv1512	epiA	13	31.92	48.70	31.71	36.21	50.73	21.56	0.099614	1.000000	-
Rv1513	-	7	47.17	41.44	48.68	35.49	48.99	51.64	0.789800	1.000000	-
Rv1514c	-	18	54.01	62.09	65.23	43.18	56.09	60.31	0.475800	1.000000	-
Rv1515c	-	18	43.08	51.12	38.62	51.77	36.05	51.02	0.835471	1.000000	-
Rv1516c	-	11	51.97	54.62	50.99	48.46	42.83	49.62	0.981397	1.000000	-
Rv1517	-	15	57.82	46.97	52.54	65.50	65.75	63.55	0.915701	1.000000	-
Rv1518	-	12	114.66	94.21	100.37	82.36	79.54	96.34	0.516323	1.000000	-
Rv1519	-	3	210.08	151.33	214.28	144.39	168.50	154.01	0.911859	1.000000	-
Rv1520	-	25	123.01	135.51	125.51	114.68	119.47	128.63	0.974865	1.000000	-
Rv1521	fadD25	38	73.98	86.85	73.21	79.26	81.88	97.10	0.454623	1.000000	-
Rv1522c	mmpL12	52	132.01	143.67	122.94	144.83	137.42	145.56	0.871592	1.000000	-
Rv1523	-	21	82.58	97.39	73.22	71.77	85.24	108.60	0.500160	1.000000	-
Rv1524	-	13	97.98	93.70	105.47	130.86	119.87	114.89	0.616063	1.000000	-
Rv1525	wbbL2	22	41.52	33.17	32.32	34.09	43.44	37.22	0.795420	1.000000	-
Rv1526c	-	19	129.74	141.59	149.53	150.79	108.49	115.55	0.811840	1.000000	-
Rv1527c	pks5	100	101.49	97.03	104.84	96.52	96.91	92.73	0.907866	1.000000	-
Rv1528c	papA4	7	256.53	227.01	242.38	228.98	263.76	203.85	0.883882	1.000000	-
Rv1529	fadD24	37	86.43	70.63	89.13	79.49	77.54	73.72	0.747550	1.000000	-
Rv1530	adh	25	50.23	60.54	52.96	53.70	56.59	51.28	0.978696	1.000000	-
Rv1531	-	8	66.62	70.60	120.79	65.82	69.13	74.94	0.325029	1.000000	-
Rv1532c	-	5	93.69	100.67	119.40	156.36	103.05	91.70	0.678386	1.000000	-
Rv1533	-	11	77.83	75.43	69.22	72.55	72.34	85.28	0.988377	1.000000	-
Rv1534	-	17	106.29	133.28	144.20	129.93	125.35	121.04	0.642793	1.000000	-
Rv1535	-	4	82.27	79.84	71.14	94.32	90.24	106.39	0.283846	1.000000	-
Rv1536	ileS	79	0.00	0.00	0.00	0.06	0.00	0.00	0.599159	1.000000	-
Rv1537	dinX	14	113.22	147.29	133.83	122.44	116.33	159.87	0.683033	1.000000	-
Rv1538c	ansA	14	249.80	241.46	253.51	216.91	192.02	237.09	0.726606	1.000000	-
Rv1539	lspA	9	39.60	54.21	43.39	38.86	72.05	37.06	0.509637	1.000000	-
Rv1540	-	14	3.94	15.98	25.64	38.62	28.67	12.34	0.000000	0.000001	-
Rv1541c	lprI	9	176.97	210.37	171.14	169.01	170.95	179.42	0.976082	1.000000	-
Rv1542c	glbN	8	168.87	134.08	138.00	135.57	156.30	177.46	0.800863	1.000000	-
Rv1543	-	15	71.03	104.08	71.79	98.87	86.76	99.14	0.856246	1.000000	-
Rv1544	-	11	159.61	159.15	170.33	155.27	148.01	172.82	0.993806	1.000000	-
Rv1545	-	3	208.35	251.80	259.01	248.17	271.19	290.89	0.978476	1.000000	-
Rv1546	-	5	372.53	435.12	336.74	328.89	395.65	321.06	0.514922	1.000000	-
Rv1547	dnaE	47	0.12	0.11	0.00	0.00	0.00	0.00	0.634510	1.000000	-
Rv1548c	PPE21	42	47.20	51.83	46.53	47.13	48.59	52.89	0.998078	1.000000	-
Rv1549	fadD11.1	9	161.88	166.95	213.00	158.06	178.20	189.18	0.836709	1.000000	-
Rv1550	fadD11	28	135.70	130.28	146.79	111.15	114.71	149.41	0.467007	1.000000	-
Rv1551	plsB1	33	120.19	142.30	127.69	130.24	121.45	121.96	0.965872	1.000000	-
Rv1552	frdA	40	60.60	75.98	63.16	67.16	65.36	69.86	0.890695	1.000000	-
Rv1553	frdB	14	109.45	113.72	112.72	123.92	104.52	120.54	0.989887	1.000000	-
Rv1554	frdC	10	159.80	157.74	146.05	156.56	152.43	142.87	0.997027	1.000000	-
Rv1555	frdD	4	147.01	137.40	85.32	131.20	121.49	143.41	0.123729	1.000000	-
Rv1556	-	14	135.71	169.16	142.92	151.66	155.09	149.59	0.906854	1.000000	-
Rv1557	mmpL6	20	121.78	127.50	139.30	119.97	122.81	138.65	0.937501	1.000000	-
Rv1558	-	9	334.96	326.94	323.94	298.39	286.10	247.81	0.843114	1.000000	-
Rv1559	ilvA	26	158.69	162.18	148.21	156.18	127.58	144.58	0.778534	1.000000	-
Rv1560	-	3	38.26	52.58	59.67	54.24	62.53	55.50	0.891171	1.000000	-
Rv1561	-	9	110.17	97.06	76.78	104.10	97.37	88.58	0.468209	1.000000	-
Rv1562c	treZ	37	59.40	55.70	61.41	63.44	57.51	58.86	0.985067	1.000000	-
Rv1563c	treY	36	44.28	40.28	58.45	49.43	52.15	43.65	0.415515	1.000000	-
Rv1564c	treX	49	55.07	53.60	50.25	52.46	56.31	52.68	0.993869	1.000000	-
Rv1565c	-	46	57.65	51.44	62.70	34.97	40.97	33.49	0.000006	0.000241	-
Rv1566c	-	10	164.80	280.42	225.98	331.06	340.31	309.21	0.001966	0.044830	-
Rv1567c	-	9	79.92	92.32	81.76	95.57	86.93	108.88	0.906404	1.000000	-
Rv1568	bioA	16	175.14	220.84	207.41	202.48	186.10	142.32	0.509495	1.000000	-
Rv1569	bioF1	7	268.71	205.22	278.39	221.62	216.49	221.92	0.768294	1.000000	-
Rv1570	bioD	2	88.55	87.50	79.72	71.75	94.20	61.68	0.995443	1.000000	-
Rv1571	-	3	62.15	136.73	64.60	89.77	46.95	32.20	0.154987	1.000000	-
Rv1572c	-	1	3.87	15.15	28.10	14.07	11.75	34.40	1.000000	1.000000	TA sites <= 1
Rv1573	-	1	176.64	116.95	112.40	37.10	0.00	76.35	1.000000	1.000000	TA sites <= 1
Rv1574	-	3	81.09	77.82	92.71	88.60	105.32	99.79	0.962010	1.000000	-
Rv1575	-	10	35.59	31.06	31.60	49.39	25.55	28.29	0.602980	1.000000	-
Rv1576c	-	10	14.96	20.94	22.20	24.11	17.61	16.94	0.900816	1.000000	-
Rv1577c	-	8	7.92	29.21	31.26	23.16	36.65	30.80	0.076282	0.879672	-
Rv1578c	-	4	81.51	88.11	50.19	75.96	96.34	57.19	0.369502	1.000000	-
Rv1579c	-	4	7.13	31.85	28.82	16.33	33.79	30.91	0.045777	0.587826	-
Rv1580c	-	5	111.52	158.82	119.39	139.74	157.00	157.41	0.658637	1.000000	-
Rv1581c	-	7	79.74	70.71	50.47	45.43	72.96	59.70	0.416588	1.000000	-
Rv1582c	-	32	34.23	32.26	37.03	33.01	32.62	45.56	0.669126	1.000000	-
Rv1583c	-	5	109.08	79.22	133.74	106.73	126.29	89.60	0.507399	1.000000	-
Rv1584c	-	3	254.74	345.56	341.59	428.09	364.35	281.79	0.798852	1.000000	-
Rv1585c	-	9	64.60	49.83	52.19	60.17	55.55	48.70	0.954425	1.000000	-
Rv1586c	-	24	85.67	86.21	105.87	106.88	85.66	78.50	0.822924	1.000000	-
Rv1587c	-	15	82.45	98.36	104.76	106.55	84.85	104.20	0.921372	1.000000	-
Rv1588c	-	11	185.77	157.96	182.41	166.29	168.35	185.57	0.993849	1.000000	-
Rv1589	bioB	10	215.82	175.91	163.78	208.85	216.15	212.54	0.801253	1.000000	-
Rv1590	-	3	330.75	247.85	341.40	363.50	310.37	263.46	0.963354	1.000000	-
Rv1591	-	8	299.27	249.41	203.21	210.94	235.28	240.57	0.704310	1.000000	-
Rv1592c	-	25	134.14	26.98	178.57	0.91	5.42	8.12	0.000000	0.000000	-
Rv1593c	-	12	167.04	142.21	199.89	167.75	174.81	146.96	0.643505	1.000000	-
Rv1594	nadA	10	0.00	0.50	1.26	0.00	0.00	0.00	0.088014	0.972790	-
Rv1595	nadB	24	0.55	2.77	2.48	4.03	5.23	1.91	0.153825	1.000000	-
Rv1596	nadC	14	52.42	44.71	54.88	59.10	66.05	47.62	0.998253	1.000000	-
Rv1597	-	12	219.68	227.43	203.34	170.76	192.77	197.08	0.692379	1.000000	-
Rv1598c	-	9	112.92	139.33	127.37	122.05	128.52	146.97	0.965052	1.000000	-
Rv1599	hisD	17	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv1600	hisC1	26	1.10	3.50	1.67	3.39	3.02	1.61	0.686912	1.000000	-
Rv1601	hisB	15	0.00	0.00	0.00	0.00	0.00	0.31	0.307620	1.000000	-
Rv1602	hisH	10	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv1603	hisA	9	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv1604	impA	13	36.75	43.11	38.26	54.77	41.22	60.30	0.094757	1.000000	-
Rv1605	hisF	7	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv1606	hisI	8	1.65	1.89	0.79	1.78	0.00	0.68	0.678587	1.000000	-
Rv1607	chaA	10	140.93	141.21	147.50	146.30	152.44	158.77	0.994054	1.000000	-
Rv1608c	bcpB	8	69.99	79.72	93.83	74.81	94.04	89.33	0.950862	1.000000	-
Rv1609	trpE	25	0.00	0.00	0.00	0.00	0.47	0.00	0.042649	0.559774	-
Rv1610	-	6	18.93	23.73	13.10	10.18	11.41	8.98	0.866713	1.000000	-
Rv1611	trpC	11	0.00	0.00	0.00	0.00	0.00	0.49	0.308134	1.000000	-
Rv1612	trpB	18	0.00	0.00	0.00	0.27	0.00	0.00	0.601999	1.000000	-
Rv1613	trpA	19	4.11	5.90	0.82	7.89	3.37	2.74	0.342453	1.000000	-
Rv1614	lgt	27	26.33	25.12	25.89	25.23	19.42	19.88	0.998659	1.000000	-
Rv1615	-	9	138.98	186.16	141.33	129.31	149.90	145.76	0.893743	1.000000	-
Rv1616	-	11	135.81	148.43	168.70	151.87	154.54	176.74	0.810786	1.000000	-
Rv1617	pykA	13	13.33	23.07	6.22	6.54	8.61	18.78	0.011079	0.197221	-
Rv1618	tesB1	18	148.94	151.80	164.17	176.61	166.65	132.36	0.947315	1.000000	-
Rv1619	-	23	88.52	66.69	83.18	78.05	103.23	57.29	0.213194	1.000000	-
Rv1620c	cydC	19	129.35	86.25	107.45	121.83	110.14	99.75	0.530389	1.000000	-
Rv1621c	cydD	20	144.87	112.14	130.70	117.98	142.65	137.19	0.810023	1.000000	-
Rv1622c	cydB	22	136.86	141.35	155.62	157.74	142.09	145.37	0.977840	1.000000	-
Rv1623c	cydA	23	122.36	123.14	133.62	110.01	139.69	143.45	0.768690	1.000000	-
Rv1624c	-	5	11.73	20.30	25.58	16.83	16.78	24.02	0.410401	1.000000	-
Rv1625c	cya	31	249.79	245.52	241.31	248.75	249.33	229.40	0.997672	1.000000	-
Rv1626	-	5	192.05	102.21	200.27	101.31	108.83	137.42	0.000365	0.009709	-
Rv1627c	-	19	106.24	108.05	135.51	114.59	112.96	111.97	0.843846	1.000000	-
Rv1628c	-	7	45.79	38.24	26.37	58.65	34.93	29.71	0.883177	1.000000	-
Rv1629	polA	42	20.70	25.81	25.67	22.29	31.75	25.81	0.730629	1.000000	-
Rv1630	rpsA	17	0.78	1.21	0.00	3.62	1.11	2.02	0.173096	1.000000	-
Rv1631	coaE	12	20.94	30.37	22.37	41.19	41.47	30.19	0.686930	1.000000	-
Rv1632c	-	11	78.27	74.45	69.72	84.69	75.75	91.68	0.881352	1.000000	-
Rv1633	uvrB	38	197.23	189.75	204.29	201.75	206.75	201.89	0.994715	1.000000	-
Rv1634	-	33	316.77	280.89	288.46	323.18	313.23	258.23	0.651130	1.000000	-
Rv1635c	-	32	206.59	188.22	188.21	197.93	195.78	204.78	0.976346	1.000000	-
Rv1636	TB15.3	9	370.36	101.28	460.20	64.43	106.61	71.88	0.000000	0.000000	-
Rv1637c	-	13	334.22	305.12	301.36	291.47	287.13	295.11	0.994549	1.000000	-
Rv1638	uvrA	39	122.52	112.41	137.09	120.52	125.28	118.90	0.947711	1.000000	-
Rv1638A	-	5	17.47	31.45	17.54	24.97	22.92	28.78	0.871889	1.000000	-
Rv1639c	-	18	132.61	124.28	108.51	101.83	107.82	118.51	0.883207	1.000000	-
Rv1640c	lysS	65	79.90	102.96	78.16	119.87	119.26	91.31	0.000378	0.009987	-
Rv1641	infC	11	0.00	0.00	0.00	0.00	1.23	0.00	0.308134	1.000000	-
Rv1642	rpmI	1	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	TA sites <= 1
Rv1643	rplT	8	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv1644	tsnR	11	209.63	167.12	181.84	195.62	186.60	167.47	0.923464	1.000000	-
Rv1645c	-	23	162.88	195.12	159.78	179.86	171.50	189.60	0.941950	1.000000	-
Rv1646	PE17	18	148.48	165.77	137.51	162.35	154.65	152.86	0.984869	1.000000	-
Rv1647	-	11	228.78	186.47	182.99	171.29	159.39	185.15	0.823137	1.000000	-
Rv1648	-	14	223.26	196.53	210.18	248.27	214.90	201.52	0.817777	1.000000	-
Rv1649	pheS	13	0.00	0.00	0.00	0.00	0.35	0.00	0.307837	1.000000	-
Rv1650	pheT	37	0.15	0.00	0.00	0.00	0.00	0.00	0.600104	1.000000	-
Rv1651c	PE_PGRS30	54	174.84	171.19	177.58	177.10	173.10	158.24	0.944876	1.000000	-
Rv1652	argC	15	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv1653	argJ	5	49.42	29.56	54.37	61.23	48.55	36.47	0.568232	1.000000	-
Rv1654	argB	4	0.00	0.00	0.00	0.00	0.00	1.18	0.311580	1.000000	-
Rv1655	argD	10	1.14	2.04	0.00	2.88	3.43	1.95	0.554625	1.000000	-
Rv1656	argF	5	0.00	0.00	3.10	0.00	0.00	0.00	0.310484	1.000000	-
Rv1657	argR	3	450.42	404.18	419.15	350.05	279.69	299.35	0.983188	1.000000	-
Rv1658	argG	18	0.00	0.28	0.00	0.00	0.00	0.00	0.307385	1.000000	-
Rv1659	argH	8	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv1660	pks10	11	148.29	167.85	165.83	178.18	179.99	128.43	0.639524	1.000000	-
Rv1661	pks7	81	42.49	35.05	45.37	47.60	41.43	35.43	0.474012	1.000000	-
Rv1662	pks8	67	20.10	24.60	26.50	20.12	24.87	18.57	0.270404	1.000000	-
Rv1663	pks17	18	60.46	43.58	47.73	38.00	53.99	54.68	0.597494	1.000000	-
Rv1664	pks9	47	56.11	57.23	67.49	58.59	49.58	51.69	0.593072	1.000000	-
Rv1665	pks11	13	118.55	140.12	116.64	120.41	136.21	118.89	0.951112	1.000000	-
Rv1666c	cyp139	20	193.81	182.55	176.02	196.01	220.08	192.21	0.924299	1.000000	-
Rv1667c	-	11	129.69	135.40	181.73	113.02	125.82	152.67	0.333633	1.000000	-
Rv1668c	-	14	125.19	129.72	129.08	107.70	100.42	93.50	0.828452	1.000000	-
Rv1669	-	9	42.74	40.78	49.39	47.94	42.91	52.26	0.986216	1.000000	-
Rv1670	-	10	46.98	56.09	51.62	52.68	63.37	67.14	0.615464	1.000000	-
Rv1671	-	15	45.50	41.50	51.65	60.85	43.61	44.54	0.418675	1.000000	-
Rv1672c	-	21	124.66	110.26	142.84	146.04	123.20	132.97	0.845584	1.000000	-
Rv1673c	-	15	93.84	77.23	89.35	94.36	91.66	82.87	0.978915	1.000000	-
Rv1674c	-	9	213.32	128.19	139.54	173.16	175.61	141.06	0.802870	1.000000	-
Rv1675c	-	11	168.49	195.60	214.98	183.16	226.62	169.35	0.818661	1.000000	-
Rv1676	-	10	42.69	49.36	55.98	65.35	52.35	49.23	0.648466	1.000000	-
Rv1677	dsbF	12	18.84	28.11	21.37	24.90	26.32	31.13	0.680898	1.000000	-
Rv1678	-	10	76.42	79.32	100.02	70.64	84.39	90.28	0.581603	1.000000	-
Rv1679	fadE16	10	28.15	29.14	41.80	31.71	34.53	18.02	0.599489	1.000000	-
Rv1680	-	15	71.70	86.15	72.29	73.31	79.59	67.99	0.987471	1.000000	-
Rv1681	moeX	15	163.22	134.57	160.60	159.47	138.92	123.42	0.834270	1.000000	-
Rv1682	-	15	71.26	61.29	72.95	57.29	57.18	79.22	0.529741	1.000000	-
Rv1683	-	41	11.40	18.04	11.13	21.86	26.75	16.02	0.000085	0.002553	-
Rv1684	-	4	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv1685c	-	7	35.48	42.12	53.00	55.40	53.82	53.74	0.434619	1.000000	-
Rv1686c	-	13	42.92	36.08	34.46	39.05	39.77	39.14	0.984699	1.000000	-
Rv1687c	-	11	96.90	113.09	99.16	92.72	109.59	113.26	0.986621	1.000000	-
Rv1688	mpg	8	202.14	149.94	165.08	173.58	139.66	121.18	0.583032	1.000000	-
Rv1689	tyrS	20	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv1690	lprJ	8	79.82	116.95	125.02	80.18	83.65	64.31	0.284334	1.000000	-
Rv1691	-	11	81.65	72.57	80.97	156.17	128.31	93.87	0.026867	0.385612	-
Rv1692	-	12	137.37	181.46	159.07	160.23	161.70	130.08	0.876079	1.000000	-
Rv1693	-	1	99.97	126.70	90.65	73.94	94.70	60.80	1.000000	1.000000	TA sites <= 1
Rv1694	tlyA	10	133.48	90.54	109.88	88.68	55.73	96.04	0.290926	1.000000	-
Rv1695	ppnK	7	1.08	0.00	0.00	0.00	1.04	0.00	0.637634	1.000000	-
Rv1696	recN	21	83.93	76.49	98.23	79.47	88.87	68.46	0.661410	1.000000	-
Rv1697	-	17	0.00	0.29	0.91	0.00	1.54	0.59	0.215448	1.000000	-
Rv1698	-	13	64.76	47.43	56.38	61.19	65.39	51.21	0.963155	1.000000	-
Rv1699	pyrG	37	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv1700	-	11	11.63	20.95	15.90	12.93	15.42	15.77	0.876535	1.000000	-
Rv1701	xerD	14	95.54	111.32	109.36	118.63	103.44	122.59	0.917232	1.000000	-
Rv1702c	-	24	68.03	63.22	64.59	70.87	64.14	70.66	0.994020	1.000000	-
Rv1703c	-	14	110.34	120.46	110.31	102.28	119.04	112.53	0.993860	1.000000	-
Rv1704c	cycA	22	121.22	119.98	119.68	122.56	123.03	134.64	0.997472	1.000000	-
Rv1705c	PPE22	26	89.07	91.98	88.14	95.60	108.48	99.12	0.890660	1.000000	-
Rv1706c	PPE23	20	106.21	129.17	94.51	97.87	100.45	98.81	0.958843	1.000000	-
Rv1706A	-	2	13.90	17.90	21.80	11.63	22.58	20.23	0.793259	1.000000	-
Rv1707	-	22	178.01	176.08	165.35	135.78	144.22	161.07	0.427943	1.000000	-
Rv1708	-	19	7.91	12.83	11.20	2.45	4.56	8.34	0.000773	0.019392	-
Rv1709	-	11	120.07	131.85	106.94	98.46	102.64	127.29	0.812589	1.000000	-
Rv1710	-	15	117.36	109.86	111.30	77.22	100.69	87.17	0.490820	1.000000	-
Rv1711	-	10	10.51	9.77	11.87	15.89	18.96	18.88	0.644642	1.000000	-
Rv1712	cmk	13	29.64	13.41	29.60	58.54	43.37	18.70	0.201034	1.000000	-
Rv1713	engA	12	0.32	0.42	0.00	0.00	0.00	0.39	0.692011	1.000000	-
Rv1714	-	8	54.11	68.16	78.22	63.47	77.71	90.41	0.484544	1.000000	-
Rv1715	fadB3	9	66.20	39.82	56.65	63.93	45.51	58.49	0.814427	1.000000	-
Rv1716	-	12	54.93	65.07	57.93	73.20	49.04	68.05	0.875557	1.000000	-
Rv1717	-	4	197.43	215.06	228.24	195.93	239.63	183.12	0.934059	1.000000	-
Rv1718	-	7	130.90	171.92	179.42	146.62	147.25	126.10	0.813982	1.000000	-
Rv1719	-	7	109.60	121.44	134.66	95.02	107.17	118.07	0.939904	1.000000	-
Rv1720c	-	9	21.44	20.92	20.14	19.66	22.17	27.66	0.876689	1.000000	-
Rv1721c	-	2	176.71	134.85	186.40	203.72	144.35	241.16	0.849682	1.000000	-
Rv1722	-	23	253.03	272.25	243.59	240.29	248.56	254.83	0.969185	1.000000	-
Rv1723	-	17	253.06	218.06	207.03	238.20	230.03	225.00	0.960107	1.000000	-
Rv1724c	-	13	141.15	154.58	152.15	142.63	150.39	157.66	0.988810	1.000000	-
Rv1725c	-	13	112.90	106.84	111.65	117.11	118.32	128.81	0.994224	1.000000	-
Rv1726	-	16	96.62	106.04	93.45	89.24	87.17	80.23	0.983040	1.000000	-
Rv1727	-	6	190.44	175.11	152.16	151.61	144.36	191.07	0.995641	1.000000	-
Rv1728c	-	20	51.95	55.07	67.65	59.09	67.74	60.04	0.939165	1.000000	-
Rv1729c	-	22	72.20	58.23	64.75	69.72	81.84	72.15	0.836988	1.000000	-
Rv1730c	-	30	29.42	21.85	40.07	19.97	26.03	27.75	0.008121	0.154302	-
Rv1731	gabD2	25	110.21	87.30	95.72	77.97	92.32	67.74	0.045244	0.586116	-
Rv1732c	-	8	66.22	87.62	104.23	79.14	75.46	101.19	0.432393	1.000000	-
Rv1733c	-	5	38.74	46.97	59.87	58.26	61.82	49.84	0.915408	1.000000	-
Rv1734c	-	3	105.42	241.51	160.19	122.44	151.15	76.72	0.335239	1.000000	-
Rv1735c	-	7	76.09	46.64	61.61	52.76	65.23	74.42	0.845404	1.000000	-
Rv1736c	narX	42	138.86	108.91	114.53	117.49	120.24	109.65	0.383700	1.000000	-
Rv1737c	narK2	15	140.46	138.21	144.43	131.29	131.78	121.55	0.966647	1.000000	-
Rv1738	-	3	84.14	37.23	43.58	65.97	38.45	29.67	0.510180	1.000000	-
Rv1739c	-	41	123.08	93.55	100.55	115.99	96.15	96.09	0.070962	0.827885	-
Rv1740	-	4	134.70	132.40	117.85	138.03	129.64	93.28	0.961267	1.000000	-
Rv1741	-	7	153.14	199.73	172.30	190.38	211.72	162.84	0.747145	1.000000	-
Rv1742	-	13	211.18	212.95	196.61	211.15	226.41	166.22	0.824931	1.000000	-
Rv1743	pknE	33	189.97	191.11	183.35	186.37	187.23	176.05	0.996921	1.000000	-
Rv1744c	-	7	280.59	243.80	238.32	271.59	210.91	241.27	0.976970	1.000000	-
Rv1745c	idi	14	46.03	46.57	43.80	47.33	45.44	53.24	0.999297	1.000000	-
Rv1746	pknF	13	68.03	120.59	87.53	101.32	88.22	91.98	0.556505	1.000000	-
Rv1747	-	33	147.95	168.71	158.68	164.30	199.54	152.17	0.659843	1.000000	-
Rv1748	-	12	110.72	136.24	127.78	112.17	101.64	130.14	0.855206	1.000000	-
Rv1749c	-	16	117.09	137.21	113.88	134.22	113.57	140.17	0.934608	1.000000	-
Rv1750c	fadD1	40	105.79	95.68	101.36	97.04	82.89	108.57	0.917024	1.000000	-
Rv1751	-	19	67.20	57.64	77.34	71.55	76.05	71.51	0.828354	1.000000	-
Rv1752	-	5	120.98	76.48	99.78	96.76	106.61	99.16	0.838785	1.000000	-
Rv1753c	PPE24	66	26.67	27.63	29.86	24.03	23.68	25.85	0.965483	1.000000	-
Rv1754c	-	40	138.12	125.57	125.75	132.69	126.97	133.58	0.953640	1.000000	-
Rv1755c	plcD	19	18.41	12.36	15.45	19.18	16.00	11.63	0.903735	1.000000	-
Rv1756c	-	23	313.99	307.80	332.57	325.69	297.51	308.59	0.987170	1.000000	-
Rv1757c	-	4	240.40	251.93	228.80	254.16	245.98	177.86	0.864578	1.000000	-
Rv1758	cut1	11	267.54	268.03	249.21	244.20	223.63	209.51	0.994176	1.000000	-
Rv1759c	wag22	26	141.66	135.25	131.18	136.98	127.30	117.88	0.926066	1.000000	-
Rv1760	-	28	98.29	104.09	124.17	105.84	103.72	114.87	0.864444	1.000000	-
Rv1761c	-	6	96.00	89.37	85.84	74.98	81.96	80.82	0.960708	1.000000	-
Rv1762c	-	10	165.73	143.30	171.58	150.93	171.14	171.56	0.947884	1.000000	-
Rv1763	-	4	199.73	262.66	241.43	257.35	242.52	164.76	0.545581	1.000000	-
Rv1764	-	23	314.92	306.77	337.50	322.26	310.10	308.25	0.992841	1.000000	-
Rv1765c	-	7	84.33	112.90	80.70	93.87	79.53	98.98	0.610009	1.000000	-
Rv1765A	-	3	64.40	84.70	81.26	69.61	62.60	74.05	0.989023	1.000000	-
Rv1766	-	3	122.99	133.35	132.46	119.78	113.38	122.92	0.999684	1.000000	-
Rv1767	-	7	210.65	194.04	143.62	193.35	174.09	149.45	0.853748	1.000000	-
Rv1768	PE_PGRS31	21	146.59	141.98	178.76	165.65	178.94	162.13	0.717387	1.000000	-
Rv1769	-	22	176.27	165.40	173.63	191.45	186.72	156.75	0.862273	1.000000	-
Rv1770	-	17	301.52	278.68	289.56	332.27	333.91	336.28	0.905602	1.000000	-
Rv1771	-	26	179.06	190.34	177.98	178.73	178.68	188.13	0.993860	1.000000	-
Rv1772	-	4	16.42	27.02	15.62	17.38	31.40	24.33	0.943841	1.000000	-
Rv1773c	-	11	86.73	84.72	75.02	100.18	90.72	81.03	0.905913	1.000000	-
Rv1774	-	30	108.47	123.91	115.10	112.53	123.52	125.52	0.954068	1.000000	-
Rv1775	-	14	79.15	84.31	117.16	117.85	100.76	93.91	0.504876	1.000000	-
Rv1776c	-	12	75.24	69.69	89.17	80.00	77.95	70.45	0.988862	1.000000	-
Rv1777	cyp144	27	83.98	81.22	96.80	87.25	81.00	70.64	0.821742	1.000000	-
Rv1778c	-	5	37.96	30.60	52.67	35.25	42.21	62.75	0.291166	1.000000	-
Rv1779c	-	14	153.58	174.90	190.09	157.18	195.67	172.09	0.950060	1.000000	-
Rv1780	-	13	95.52	147.68	102.95	132.91	140.21	138.31	0.092583	1.000000	-
Rv1781c	malQ	27	168.99	163.40	148.16	169.30	165.63	156.73	0.963499	1.000000	-
Rv1782	-	20	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv1783	-	17	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv1784	-	41	0.00	0.13	0.00	0.00	0.00	0.00	0.306729	1.000000	-
Rv1785c	cyp143	22	109.02	80.18	102.74	84.57	97.01	94.09	0.664506	1.000000	-
Rv1786	-	1	117.30	95.85	106.70	126.20	133.60	124.85	1.000000	1.000000	TA sites <= 1
Rv1787	PPE25	19	358.82	352.34	340.68	333.64	305.13	313.75	0.995642	1.000000	-
Rv1788	PE18	5	246.81	268.82	171.37	198.84	180.78	225.48	0.653520	1.000000	-
Rv1789	PPE26	20	147.14	125.69	124.61	125.92	117.43	118.78	0.971085	1.000000	-
Rv1790	PPE27	20	353.80	320.74	348.30	331.27	294.19	280.32	0.977915	1.000000	-
Rv1791	PE19	6	66.13	61.86	63.58	68.29	89.10	58.33	0.401634	1.000000	-
Rv1793	esxN	5	122.99	148.17	138.90	112.20	118.03	134.35	0.762811	1.000000	-
Rv1794	-	22	0.00	0.00	0.00	0.00	0.00	0.21	0.307172	1.000000	-
Rv1795	-	22	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv1796	mycP5	36	2.09	1.42	2.42	1.68	0.33	2.40	0.869455	1.000000	-
Rv1797	-	15	0.50	0.00	0.00	0.00	0.00	0.00	0.602744	1.000000	-
Rv1798	-	30	18.34	18.31	19.92	9.39	4.85	12.89	0.000008	0.000293	-
Rv1799	lppT	2	47.92	61.75	54.80	77.99	90.28	98.10	0.681515	1.000000	-
Rv1800	PPE28	40	79.45	81.07	74.30	76.23	82.05	72.84	0.995258	1.000000	-
Rv1801	PPE29	25	73.23	81.10	71.80	85.83	83.91	77.94	0.938815	1.000000	-
Rv1802	PPE30	21	173.21	175.70	174.69	168.55	144.63	168.30	0.970706	1.000000	-
Rv1803c	PE_PGRS32	34	131.86	140.27	138.45	124.35	127.70	132.40	0.993665	1.000000	-
Rv1804c	-	10	81.21	84.17	81.96	91.21	73.88	93.76	0.934096	1.000000	-
Rv1805c	-	6	28.26	24.42	21.30	31.96	30.24	17.34	0.755601	1.000000	-
Rv1806	PE20	5	36.51	33.00	61.81	48.81	32.30	22.65	0.381086	1.000000	-
Rv1807	PPE31	21	56.18	79.37	69.55	95.50	98.89	69.64	0.024689	0.366212	-
Rv1808	PPE32	29	246.96	210.48	228.51	224.87	221.17	215.60	0.971663	1.000000	-
Rv1809	PPE33	24	92.42	78.21	80.89	84.89	96.39	79.80	0.958259	1.000000	-
Rv1810	-	12	144.76	133.69	143.36	133.48	138.38	133.53	0.998015	1.000000	-
Rv1811	mgtC	16	247.32	277.45	268.48	276.72	254.89	277.99	0.988221	1.000000	-
Rv1812c	-	23	182.47	153.72	171.39	159.05	167.34	164.78	0.985710	1.000000	-
Rv1813c	-	9	105.50	135.50	139.79	121.31	122.27	152.33	0.340035	1.000000	-
Rv1814	erg3	24	111.51	105.61	102.62	102.58	101.79	119.36	0.952689	1.000000	-
Rv1815	-	8	62.84	96.74	76.35	78.05	54.84	73.13	0.891282	1.000000	-
Rv1816	-	15	191.73	169.33	169.67	163.90	139.27	165.87	0.954165	1.000000	-
Rv1817	-	29	143.22	138.61	142.61	142.42	147.94	158.75	0.989349	1.000000	-
Rv1818c	PE_PGRS33	16	259.90	206.51	244.62	221.86	194.79	225.62	0.937080	1.000000	-
Rv1819c	-	33	164.82	157.63	153.30	179.30	167.06	165.63	0.958376	1.000000	-
Rv1820	ilvG	20	198.22	180.97	197.41	183.33	173.72	190.34	0.994646	1.000000	-
Rv1821	secA2	39	60.44	126.01	83.60	154.05	164.21	80.85	0.000000	0.000014	-
Rv1822	pgsA2	17	3.89	4.46	5.13	2.70	4.88	6.11	0.977813	1.000000	-
Rv1823	-	15	96.83	127.21	96.96	101.54	108.74	98.82	0.622162	1.000000	-
Rv1824	-	5	78.64	66.27	57.46	57.88	59.38	82.51	0.942058	1.000000	-
Rv1825	-	10	89.73	85.95	95.61	71.93	72.92	80.19	0.866296	1.000000	-
Rv1826	gcvH	9	3.70	9.05	0.00	12.37	11.44	7.35	0.000046	0.001483	-
Rv1827	cfp17	8	0.48	0.65	0.00	1.22	0.00	0.00	0.527235	1.000000	-
Rv1828	-	14	7.64	0.36	7.17	0.00	0.00	0.00	0.000001	0.000045	-
Rv1829	-	9	68.28	106.70	112.42	110.80	126.26	100.08	0.283563	1.000000	-
Rv1830	-	11	8.21	10.11	19.92	21.66	18.21	10.26	0.638305	1.000000	-
Rv1831	-	5	117.58	126.50	119.51	160.19	141.17	139.88	0.955595	1.000000	-
Rv1832	gcvB	57	11.05	26.87	5.18	40.23	30.88	22.37	0.000000	0.000000	-
Rv1833c	-	14	94.16	99.82	113.64	93.46	76.11	80.51	0.662958	1.000000	-
Rv1834	-	12	191.21	206.97	197.09	178.52	168.62	149.00	0.887033	1.000000	-
Rv1835c	-	41	284.09	255.46	280.95	253.12	252.83	255.67	0.871306	1.000000	-
Rv1836c	-	43	67.72	78.47	80.98	57.48	85.95	58.78	0.066469	0.789322	-
Rv1837c	glcB	26	28.66	31.71	37.81	47.27	35.79	32.23	0.297149	1.000000	-
Rv1838c	-	10	424.83	432.91	400.05	399.29	407.02	399.93	0.998976	1.000000	-
Rv1839c	-	3	136.38	91.47	147.76	115.44	131.38	90.60	0.903353	1.000000	-
Rv1840c	PE_PGRS34	16	82.64	84.52	84.13	81.89	62.13	70.93	0.977284	1.000000	-
Rv1841c	-	13	213.70	171.75	192.02	175.62	200.09	186.65	0.987166	1.000000	-
Rv1842c	-	16	177.48	174.81	153.33	175.48	149.66	145.59	0.865742	1.000000	-
Rv1843c	guaB1	23	286.76	242.45	272.82	248.02	250.02	266.28	0.925161	1.000000	-
Rv1844c	gnd1	17	234.55	242.94	241.71	232.42	228.91	223.99	0.997696	1.000000	-
Rv1845c	-	14	454.72	328.14	248.09	4.67	6.44	325.38	0.000000	0.000000	-
Rv1846c	-	3	81.08	76.68	70.71	80.67	80.58	116.75	0.613354	1.000000	-
Rv1847	-	5	229.46	223.38	236.70	244.20	208.60	266.37	0.998139	1.000000	-
Rv1848	ureA	2	186.87	211.45	158.32	142.82	158.18	178.38	0.948495	1.000000	-
Rv1849	ureB	6	64.22	71.36	80.87	69.19	67.19	58.32	0.966924	1.000000	-
Rv1850	ureC	18	129.82	94.08	123.23	128.88	124.57	121.95	0.700243	1.000000	-
Rv1851	ureF	2	355.43	284.87	496.28	369.03	469.68	382.22	0.944651	1.000000	-
Rv1852	ureG	5	263.48	195.06	251.04	235.23	198.12	149.25	0.929158	1.000000	-
Rv1853	ureD	6	94.01	64.82	82.30	104.92	86.91	82.42	0.960211	1.000000	-
Rv1854c	ndh	19	101.40	94.52	96.09	60.77	69.11	95.58	0.142114	1.000000	-
Rv1855c	-	14	199.18	210.29	204.08	222.49	225.53	233.83	0.872475	1.000000	-
Rv1856c	-	5	325.95	326.16	191.64	364.52	315.96	291.15	0.741572	1.000000	-
Rv1857	modA	6	124.10	158.28	132.79	143.38	140.52	180.45	0.867138	1.000000	-
Rv1858	modB	22	182.67	163.00	187.12	147.36	158.32	160.10	0.575622	1.000000	-
Rv1859	modC	16	244.71	211.75	217.59	195.34	224.03	220.86	0.938943	1.000000	-
Rv1860	apa	16	96.00	136.18	106.63	161.86	153.21	140.78	0.396819	1.000000	-
Rv1861	-	7	46.77	46.36	62.70	51.06	51.94	68.54	0.826924	1.000000	-
Rv1862	adhA	15	330.77	313.53	360.50	331.93	319.29	299.50	0.971423	1.000000	-
Rv1863c	-	10	260.94	212.08	235.97	214.38	230.20	217.35	0.988634	1.000000	-
Rv1864c	-	10	315.46	311.72	305.90	294.41	263.79	229.42	0.762499	1.000000	-
Rv1865c	-	13	119.76	115.76	140.36	136.93	135.09	125.17	0.952229	1.000000	-
Rv1866	-	34	90.28	85.69	94.18	102.97	97.28	90.94	0.913094	1.000000	-
Rv1867	-	20	112.00	109.26	134.62	124.32	130.83	131.90	0.929780	1.000000	-
Rv1868	-	32	197.03	181.46	200.85	185.52	179.17	189.05	0.991227	1.000000	-
Rv1869c	-	26	138.53	131.15	129.70	134.20	120.21	121.99	0.941099	1.000000	-
Rv1870c	-	12	93.82	130.96	96.25	92.97	102.34	90.48	0.573137	1.000000	-
Rv1871c	-	9	179.77	171.73	166.69	170.19	168.63	202.86	0.985101	1.000000	-
Rv1872c	lldD2	14	238.66	188.08	222.14	199.30	170.96	252.48	0.750980	1.000000	-
Rv1873	-	10	301.63	263.20	292.86	271.03	255.44	244.53	0.870729	1.000000	-
Rv1874	-	12	173.79	183.13	171.66	185.90	181.29	179.06	0.998879	1.000000	-
Rv1875	-	5	303.36	342.43	271.24	347.97	319.04	293.12	0.975861	1.000000	-
Rv1876	bfrA	10	138.69	152.06	139.09	158.02	150.71	169.61	0.919039	1.000000	-
Rv1877	-	33	191.74	184.04	177.72	174.84	182.27	193.16	0.977033	1.000000	-
Rv1878	glnA3	27	81.80	62.00	79.89	75.47	72.93	73.09	0.926943	1.000000	-
Rv1879	-	19	81.25	112.86	93.35	95.41	93.88	98.63	0.891416	1.000000	-
Rv1880c	cyp140	16	108.92	105.69	125.25	103.84	108.27	92.86	0.887902	1.000000	-
Rv1881c	lppE	8	57.79	66.71	49.69	64.46	56.61	72.18	0.897108	1.000000	-
Rv1882c	-	15	183.24	196.06	202.43	200.15	192.01	192.18	0.994904	1.000000	-
Rv1883c	-	7	212.99	245.56	243.71	247.82	224.65	236.32	0.987169	1.000000	-
Rv1884c	rpfC	6	58.94	69.54	58.40	66.89	68.56	95.10	0.701385	1.000000	-
Rv1885c	-	14	212.45	183.21	213.39	208.97	200.38	194.15	0.993410	1.000000	-
Rv1886c	fbpB	25	134.30	144.40	126.64	129.09	137.48	157.15	0.644804	1.000000	-
Rv1887	-	25	181.92	162.19	184.28	167.28	187.24	149.13	0.897654	1.000000	-
Rv1888c	-	18	161.77	169.25	159.58	160.73	164.84	157.38	0.999936	1.000000	-
Rv1888A	-	0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	TA sites <= 1
Rv1889c	-	4	206.69	127.87	137.65	135.34	154.78	159.31	0.969766	1.000000	-
Rv1890c	-	8	98.57	91.64	88.91	92.35	113.18	82.77	0.913710	1.000000	-
Rv1891	-	8	292.75	230.79	232.74	254.72	179.14	209.81	0.674395	1.000000	-
Rv1892	-	7	307.83	254.25	284.08	271.98	298.15	247.93	0.992778	1.000000	-
Rv1893	-	0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	TA sites <= 1
Rv1894c	-	14	153.83	122.70	141.41	124.71	136.26	140.59	0.987678	1.000000	-
Rv1895	-	18	103.35	73.10	98.03	90.18	92.85	89.18	0.620354	1.000000	-
Rv1896c	-	24	133.76	121.69	132.94	145.38	116.63	120.64	0.931372	1.000000	-
Rv1897c	-	5	164.39	95.57	182.34	165.64	158.60	143.16	0.575582	1.000000	-
Rv1898	-	3	243.56	226.86	231.11	245.72	224.05	206.54	0.995786	1.000000	-
Rv1899c	lppD	13	226.80	231.20	247.99	223.38	243.04	224.27	0.998448	1.000000	-
Rv1900c	lipJ	24	106.71	121.40	118.06	125.17	113.32	101.01	0.879190	1.000000	-
Rv1901	cinA	18	110.13	131.81	130.11	130.95	127.66	127.86	0.912511	1.000000	-
Rv1902c	nanT	33	105.49	111.89	103.39	98.21	103.73	97.87	0.945854	1.000000	-
Rv1903	-	5	72.93	62.14	88.19	73.09	85.56	94.72	0.980044	1.000000	-
Rv1904	-	10	337.98	307.49	372.35	310.81	325.76	300.56	0.990263	1.000000	-
Rv1905c	aao	18	145.27	147.37	147.03	131.66	127.80	146.03	0.961414	1.000000	-
Rv1906c	-	9	98.20	115.02	115.26	149.29	154.24	88.01	0.314936	1.000000	-
Rv1907c	-	10	56.12	75.98	70.88	77.80	58.12	87.51	0.656252	1.000000	-
Rv1908c	katG	39	49.70	67.44	51.80	84.13	83.99	73.05	0.004215	0.085367	-
Rv1909c	furA	12	112.41	125.04	121.34	121.39	145.31	121.98	0.973727	1.000000	-
Rv1910c	-	13	226.78	205.02	222.32	236.20	182.89	185.23	0.717546	1.000000	-
Rv1911c	lppC	9	86.81	88.52	104.75	107.81	82.14	79.18	0.903069	1.000000	-
Rv1912c	fadB5	15	110.29	96.53	109.47	89.95	130.23	75.92	0.279364	1.000000	-
Rv1913	-	11	181.47	177.51	194.39	164.43	162.15	167.69	0.982243	1.000000	-
Rv1914c	-	7	88.70	99.50	109.45	89.23	101.32	116.88	0.921699	1.000000	-
Rv1915	aceAa	21	128.76	135.66	138.78	145.25	131.33	125.73	0.982521	1.000000	-
Rv1916	aceAb	17	74.47	85.56	105.01	84.45	81.41	107.46	0.325834	1.000000	-
Rv1917c	PPE34	121	35.02	33.02	35.05	34.87	32.15	33.81	0.989991	1.000000	-
Rv1918c	PPE35	75	37.58	39.10	36.22	37.00	38.37	45.49	0.855878	1.000000	-
Rv1919c	-	7	182.79	206.38	213.57	210.83	204.57	214.59	0.996606	1.000000	-
Rv1920	-	12	174.46	157.34	175.04	170.85	161.32	163.19	0.995421	1.000000	-
Rv1921c	lppF	22	123.43	107.11	116.81	116.19	123.50	119.51	0.995802	1.000000	-
Rv1922	-	20	81.29	76.00	83.84	85.60	88.85	89.82	0.992952	1.000000	-
Rv1923	lipD	34	145.56	159.81	136.37	148.58	154.91	193.48	0.283390	1.000000	-
Rv1924c	-	11	203.55	217.61	186.36	199.83	176.08	205.78	0.941539	1.000000	-
Rv1925	fadD31	38	129.82	165.08	102.59	169.04	175.14	183.67	0.002233	0.049225	-
Rv1926c	mpt63	8	3.54	5.07	3.51	5.24	5.87	8.18	0.729119	1.000000	-
Rv1927	-	17	180.14	183.55	141.90	140.75	151.88	130.12	0.718180	1.000000	-
Rv1928c	-	18	73.91	87.53	75.79	83.91	75.33	92.58	0.901616	1.000000	-
Rv1929c	-	9	50.51	69.00	51.67	63.97	69.68	54.10	0.850913	1.000000	-
Rv1930c	-	5	32.30	35.85	34.30	29.19	44.37	38.72	0.934447	1.000000	-
Rv1931c	-	5	132.22	124.86	121.68	120.00	102.51	77.58	0.690932	1.000000	-
Rv1932	tpx	8	127.19	177.53	161.01	187.86	154.78	162.49	0.508774	1.000000	-
Rv1933c	fadE18	10	159.97	174.77	145.03	154.53	178.22	158.57	0.963832	1.000000	-
Rv1934c	fadE17	12	135.40	142.10	136.15	154.22	139.93	136.71	0.984223	1.000000	-
Rv1935c	echA13	10	175.89	187.91	171.23	151.78	155.01	178.02	0.933133	1.000000	-
Rv1936	-	17	155.56	157.43	152.26	159.74	160.21	145.97	0.998822	1.000000	-
Rv1937	-	48	83.51	77.85	84.62	75.71	85.23	76.67	0.874440	1.000000	-
Rv1938	ephB	17	86.09	71.09	67.27	65.11	76.75	46.10	0.253326	1.000000	-
Rv1939	-	5	82.15	77.51	68.83	68.55	67.13	67.51	0.981069	1.000000	-
Rv1940	ribA1	9	140.91	139.88	149.92	128.50	152.70	143.63	0.993384	1.000000	-
Rv1941	-	4	130.76	103.51	93.06	115.80	97.66	79.54	0.675762	1.000000	-
Rv1942c	-	2	124.12	163.75	195.87	147.84	128.13	54.08	0.329419	1.000000	-
Rv1943c	-	10	56.39	89.25	85.39	79.13	77.94	85.96	0.898473	1.000000	-
Rv1944c	-	8	57.44	49.12	81.57	58.24	51.09	57.53	0.315794	1.000000	-
Rv1945	-	21	108.62	103.60	126.99	118.10	111.07	109.59	0.951567	1.000000	-
Rv1946c	lppG	7	90.93	96.81	79.06	101.49	103.51	119.59	0.873978	1.000000	-
Rv1947	-	5	159.13	204.02	196.57	200.67	190.40	191.59	0.960335	1.000000	-
Rv1948c	-	17	44.64	50.95	46.22	54.83	46.55	55.96	0.973295	1.000000	-
Rv1949c	-	21	122.54	106.01	106.17	108.26	124.14	92.40	0.981392	1.000000	-
Rv1950c	-	6	205.14	213.56	200.43	206.67	206.58	174.00	0.998097	1.000000	-
Rv1951c	-	5	3.79	2.04	3.79	0.96	2.89	3.24	0.948436	1.000000	-
Rv1952	-	2	139.11	104.60	125.35	89.85	95.65	134.98	0.762973	1.000000	-
Rv1953	-	12	86.76	87.45	91.71	82.10	81.80	86.10	0.999738	1.000000	-
Rv1954c	-	11	73.99	58.32	48.44	56.87	55.06	76.42	0.610590	1.000000	-
Rv1955	-	9	68.22	47.58	70.33	71.31	57.76	68.86	0.977590	1.000000	-
Rv1956	-	8	132.61	133.97	154.24	97.40	111.76	150.65	0.805263	1.000000	-
Rv1957	-	13	188.41	166.06	163.97	96.85	85.35	170.13	0.007191	0.137948	-
Rv1958c	-	11	107.25	107.48	117.67	101.55	92.49	119.83	0.989026	1.000000	-
Rv1959c	-	7	145.74	150.25	183.92	161.82	156.77	167.74	0.998716	1.000000	-
Rv1960c	-	4	179.68	164.88	183.81	160.33	127.00	148.38	0.858383	1.000000	-
Rv1961	-	10	218.03	216.44	208.69	203.34	220.50	253.55	0.933258	1.000000	-
Rv1962c	-	14	155.27	188.63	160.03	160.58	165.42	179.10	0.893258	1.000000	-
Rv1963c	mce3R	18	64.46	85.40	86.02	73.38	72.00	83.97	0.817560	1.000000	-
Rv1964	yrbE3A	7	205.18	215.68	227.01	226.34	223.23	241.17	0.999178	1.000000	-
Rv1965	yrbE3B	15	189.67	215.08	212.17	198.43	196.29	196.19	0.995597	1.000000	-
Rv1966	mce3A	15	173.61	171.05	171.46	169.67	159.65	156.88	0.997563	1.000000	-
Rv1967	mce3B	13	245.25	291.50	225.81	276.09	216.47	241.18	0.564841	1.000000	-
Rv1968	mce3C	12	86.27	97.28	97.63	94.34	82.75	91.10	0.994494	1.000000	-
Rv1969	mce3D	13	224.36	164.10	215.22	192.40	212.56	182.74	0.586176	1.000000	-
Rv1970	lprM	10	48.30	64.13	53.04	69.14	67.51	57.71	0.775588	1.000000	-
Rv1971	mce3F	20	146.99	162.71	121.52	178.26	154.46	162.63	0.713112	1.000000	-
Rv1972	-	5	160.32	171.21	132.47	138.67	159.95	103.57	0.744238	1.000000	-
Rv1973	-	4	329.76	239.88	253.45	362.44	222.34	222.65	0.845940	1.000000	-
Rv1974	-	8	157.35	145.04	174.17	151.45	135.44	160.61	0.958741	1.000000	-
Rv1975	-	13	202.98	181.11	170.84	204.01	197.53	209.73	0.963179	1.000000	-
Rv1976c	-	3	337.87	235.36	160.39	267.16	235.84	211.44	0.899154	1.000000	-
Rv1977	-	13	135.83	129.97	119.78	118.68	146.31	131.07	0.907183	1.000000	-
Rv1978	-	14	205.51	199.98	198.98	196.70	189.78	186.49	0.999377	1.000000	-
Rv1979c	-	38	136.73	153.38	140.29	124.92	130.16	142.76	0.942382	1.000000	-
Rv1980c	mpt64	19	133.78	135.76	134.61	138.45	127.41	165.77	0.800676	1.000000	-
Rv1981c	nrdF	24	184.79	190.70	156.45	176.41	171.64	179.67	0.946080	1.000000	-
Rv1982c	-	5	267.65	287.76	222.74	244.38	256.10	233.68	0.989385	1.000000	-
Rv1983	PE_PGRS35	34	149.60	142.89	133.37	142.41	147.24	143.31	0.994984	1.000000	-
Rv1984c	cfp21	13	127.20	142.89	122.68	138.65	137.96	163.55	0.897300	1.000000	-
Rv1985c	-	14	184.22	178.22	222.77	213.29	194.38	188.83	0.877424	1.000000	-
Rv1986	-	8	199.75	290.05	224.20	248.72	215.20	158.74	0.474830	1.000000	-
Rv1987	-	9	166.67	146.99	136.16	129.05	141.58	143.30	0.977779	1.000000	-
Rv1988	-	6	193.52	132.87	133.90	146.47	134.74	171.13	0.886521	1.000000	-
Rv1989c	-	11	218.38	226.16	201.56	223.38	186.51	225.06	0.959504	1.000000	-
Rv1990c	-	6	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv1990A	-	4	156.31	188.34	210.31	192.31	247.22	193.91	0.904453	1.000000	-
Rv1991c	-	6	208.68	238.69	214.08	238.51	193.14	238.10	0.966696	1.000000	-
Rv1992c	ctpG	34	223.90	212.12	218.40	202.33	221.76	210.39	0.976153	1.000000	-
Rv1993c	-	5	200.43	187.83	196.80	208.89	184.62	227.07	0.997989	1.000000	-
Rv1994c	-	8	194.60	170.77	214.76	158.15	172.22	163.94	0.977941	1.000000	-
Rv1995	-	8	407.23	396.49	435.67	456.70	414.60	415.01	0.997339	1.000000	-
Rv1996	-	13	256.43	251.37	201.02	228.11	202.22	250.10	0.872534	1.000000	-
Rv1997	ctpF	29	120.59	124.96	125.43	114.30	119.60	114.30	0.993928	1.000000	-
Rv1998c	-	19	55.45	67.60	66.88	69.60	63.57	57.68	0.957295	1.000000	-
Rv1999c	-	26	200.96	190.54	181.71	192.51	175.62	157.27	0.984984	1.000000	-
Rv2000	-	35	100.45	110.75	104.20	96.63	100.90	111.78	0.883370	1.000000	-
Rv2001	-	15	109.96	107.00	99.62	109.67	97.99	82.62	0.853673	1.000000	-
Rv2002	fabG3	10	80.83	67.38	76.22	95.19	94.33	80.72	0.832253	1.000000	-
Rv2003c	-	13	48.75	70.25	53.37	43.97	53.36	48.72	0.718207	1.000000	-
Rv2004c	-	25	77.60	65.22	67.87	66.52	66.18	57.25	0.886808	1.000000	-
Rv2005c	-	13	43.21	40.58	45.71	30.65	45.94	51.43	0.749763	1.000000	-
Rv2006	otsB1	82	65.73	44.86	57.50	52.74	49.95	50.26	0.073664	0.854413	-
Rv2007c	fdxA	8	58.92	45.96	39.44	38.28	48.49	41.21	0.763706	1.000000	-
Rv2008c	-	29	55.59	49.21	58.61	58.44	47.40	58.27	0.911301	1.000000	-
Rv2009	-	4	81.75	80.05	87.60	102.85	99.95	71.93	0.995434	1.000000	-
Rv2010	-	7	211.25	215.91	214.97	184.79	173.59	174.11	0.985101	1.000000	-
Rv2011c	-	6	217.56	133.91	178.17	181.03	176.28	152.56	0.764132	1.000000	-
Rv2012	-	11	167.36	163.87	144.56	151.59	162.48	161.52	0.986365	1.000000	-
Rv2013	-	3	116.23	161.58	213.51	198.04	161.45	108.57	0.773016	1.000000	-
Rv2014	-	4	246.00	192.47	280.83	279.25	306.72	226.45	0.946274	1.000000	-
Rv2015c	-	11	103.37	99.89	101.61	99.68	106.38	87.93	0.954985	1.000000	-
Rv2016	-	7	74.42	76.51	70.12	56.57	67.38	71.76	0.995715	1.000000	-
Rv2017	-	12	0.00	0.42	0.00	0.00	0.00	0.00	0.307973	1.000000	-
Rv2018	-	14	17.46	21.41	18.06	26.60	30.55	25.73	0.314226	1.000000	-
Rv2019	-	6	126.42	141.74	140.79	128.73	112.33	136.56	0.929984	1.000000	-
Rv2020c	-	4	202.39	181.97	190.83	223.30	203.53	174.52	0.987279	1.000000	-
Rv2021c	-	6	265.87	248.27	225.75	262.32	261.09	243.37	0.998572	1.000000	-
Rv2022c	-	13	242.72	218.58	217.92	244.30	263.22	259.81	0.874675	1.000000	-
Rv2023c	-	2	55.34	58.92	63.95	62.65	68.55	77.25	0.670886	1.000000	-
Rv2024c	-	15	149.63	158.54	133.85	151.79	144.52	155.57	0.990546	1.000000	-
Rv2025c	-	11	115.28	139.57	151.60	120.51	121.47	134.41	0.977208	1.000000	-
Rv2026c	-	11	58.10	47.94	68.34	49.88	41.18	39.73	0.484916	1.000000	-
Rv2027c	-	15	188.77	211.71	179.00	198.47	198.16	173.73	0.947210	1.000000	-
Rv2028c	-	13	126.03	109.75	111.43	114.49	111.29	96.41	0.994324	1.000000	-
Rv2029c	pfkB	11	62.35	66.79	92.38	91.90	69.05	84.70	0.453311	1.000000	-
Rv2030c	-	34	139.11	120.68	125.90	124.14	125.99	120.84	0.957367	1.000000	-
Rv2031c	hspX	8	103.64	116.23	84.60	104.07	91.34	81.27	0.979181	1.000000	-
Rv2032	acg	18	84.85	95.43	105.90	112.13	76.81	84.18	0.545969	1.000000	-
Rv2033c	-	11	208.52	180.48	190.53	178.81	168.74	190.68	0.984524	1.000000	-
Rv2034	-	3	93.27	52.67	115.68	56.36	74.53	49.95	0.648538	1.000000	-
Rv2035	-	12	107.36	109.56	85.98	90.36	98.05	102.22	0.925097	1.000000	-
Rv2036	-	9	65.63	69.12	58.23	58.55	65.97	54.92	0.991426	1.000000	-
Rv2037c	-	16	69.60	65.46	80.68	69.44	55.93	56.76	0.659971	1.000000	-
Rv2038c	-	17	47.74	40.47	35.82	30.07	27.96	34.74	0.521026	1.000000	-
Rv2039c	-	16	37.40	45.23	58.77	35.17	36.66	41.27	0.361157	1.000000	-
Rv2040c	-	18	52.53	52.44	43.20	32.15	43.14	44.03	0.905667	1.000000	-
Rv2041c	-	25	67.28	53.90	50.44	57.80	48.70	56.13	0.557337	1.000000	-
Rv2042c	-	15	100.10	81.02	78.99	67.10	95.65	110.87	0.254517	1.000000	-
Rv2043c	pncA	12	143.82	105.09	117.08	109.19	112.53	101.65	0.731148	1.000000	-
Rv2044c	-	7	72.88	106.93	103.64	68.14	75.62	82.19	0.125455	1.000000	-
Rv2045c	lipT	29	139.29	101.17	137.46	129.46	117.90	105.47	0.462664	1.000000	-
Rv2046	lppI	10	313.72	262.62	271.94	216.32	208.30	286.20	0.393427	1.000000	-
Rv2047c	-	32	0.24	0.47	25.81	86.97	81.38	0.95	0.000000	0.000000	-
Rv2048c	pks12	147	2.94	12.54	17.17	50.52	50.30	6.54	0.000000	0.000000	-
Rv2049c	-	1	382.25	77.05	115.85	284.17	111.90	394.17	1.000000	1.000000	TA sites <= 1
Rv2050	-	5	0.77	2.04	2.52	0.00	4.69	2.17	0.492301	1.000000	-
Rv2051c	ppm1	33	119.44	109.53	118.03	85.20	133.30	92.16	0.515448	1.000000	-
Rv2052c	-	21	284.17	263.99	260.73	275.07	239.34	225.26	0.868844	1.000000	-
Rv2053c	fxsA	4	133.66	169.41	142.37	137.50	145.73	203.10	0.879370	1.000000	-
Rv2054	-	16	168.47	155.28	186.56	179.83	195.01	189.70	0.884867	1.000000	-
Rv2055c	rpsR	3	67.84	42.62	73.05	82.39	84.55	67.79	0.775702	1.000000	-
Rv2056c	rpsN	3	103.77	93.20	117.75	99.67	97.75	121.12	0.986760	1.000000	-
Rv2057c	rpmG	4	342.04	340.28	344.19	365.16	327.77	307.69	0.998558	1.000000	-
Rv2058c	rpmB	5	159.05	159.13	132.15	126.58	143.37	142.72	0.980706	1.000000	-
Rv2059	-	20	109.28	113.96	104.86	104.41	116.91	119.07	0.977897	1.000000	-
Rv2060	-	3	123.32	99.93	108.20	102.02	147.68	133.06	0.857179	1.000000	-
Rv2061c	-	6	162.52	228.49	201.20	175.58	157.47	192.36	0.720245	1.000000	-
Rv2062c	cobN	50	129.57	102.66	128.67	113.86	106.55	115.52	0.535202	1.000000	-
Rv2063	-	3	29.96	28.78	14.72	21.88	48.12	46.55	0.021661	0.332410	-
Rv2064	cobG	9	36.99	31.61	39.13	36.82	44.27	31.05	0.985814	1.000000	-
Rv2065	cobH	8	187.38	189.42	195.61	213.61	207.41	195.44	0.997082	1.000000	-
Rv2066	cobI	22	288.56	271.32	265.55	276.36	236.12	256.84	0.977721	1.000000	-
Rv2067c	-	34	95.13	105.19	96.29	101.59	82.55	98.08	0.977540	1.000000	-
Rv2068c	blaC	14	224.05	205.00	232.94	242.56	207.49	210.72	0.998504	1.000000	-
Rv2069	sigC	8	206.37	187.18	170.59	181.83	206.37	177.01	0.974894	1.000000	-
Rv2070c	cobK	16	117.26	111.45	119.31	116.57	102.71	122.30	0.994644	1.000000	-
Rv2071c	cobM	17	162.15	194.03	195.21	211.39	182.50	174.91	0.753030	1.000000	-
Rv2072c	cobL	13	104.96	98.20	128.46	130.85	111.84	93.21	0.658117	1.000000	-
Rv2073c	-	10	181.04	168.47	172.37	179.01	204.37	139.59	0.932037	1.000000	-
Rv2074	-	6	211.84	177.60	210.83	200.48	171.45	174.61	0.932651	1.000000	-
Rv2075c	-	26	286.83	258.11	288.25	254.61	250.65	270.72	0.957119	1.000000	-
Rv2076c	-	5	47.24	48.82	51.28	52.27	58.84	54.04	0.991301	1.000000	-
Rv2077c	-	19	259.57	213.60	256.24	216.60	212.67	236.50	0.875148	1.000000	-
Rv2077A	-	7	91.86	64.97	94.47	73.88	98.39	116.76	0.559053	1.000000	-
Rv2078	-	3	99.27	67.77	81.25	62.47	80.92	83.10	0.906573	1.000000	-
Rv2079	-	34	118.77	98.24	107.05	107.49	103.64	99.30	0.986990	1.000000	-
Rv2080	lppJ	10	21.40	35.29	31.31	25.49	25.72	32.74	0.817148	1.000000	-
Rv2081c	-	7	204.50	171.91	203.75	180.49	169.49	183.67	0.998475	1.000000	-
Rv2082	-	38	120.43	110.58	118.11	114.21	113.88	111.38	0.999442	1.000000	-
Rv2083	-	6	309.28	262.02	242.18	284.17	282.96	261.34	0.984685	1.000000	-
Rv2084	-	25	192.46	191.24	192.09	210.53	213.43	193.60	0.967275	1.000000	-
Rv2085	-	3	94.85	82.88	65.56	94.25	58.62	102.19	0.703386	1.000000	-
Rv2086	-	11	111.19	98.26	149.15	91.61	102.51	155.52	0.229205	1.000000	-
Rv2087	-	5	7.21	11.15	1.26	7.57	9.74	9.17	0.495690	1.000000	-
Rv2088	pknJ	30	62.28	69.21	70.96	60.13	67.85	58.09	0.940340	1.000000	-
Rv2089c	pepE	21	47.46	49.92	52.84	40.91	48.30	47.76	0.920072	1.000000	-
Rv2090	-	16	120.28	115.90	123.54	99.24	109.90	122.67	0.867391	1.000000	-
Rv2091c	-	19	102.45	113.10	95.02	120.80	117.94	105.13	0.877615	1.000000	-
Rv2092c	helY	40	215.10	201.97	210.40	206.66	218.13	207.70	0.994860	1.000000	-
Rv2093c	tatC	12	12.36	6.74	15.86	14.76	17.15	5.00	0.833008	1.000000	-
Rv2094c	tatA	2	1.93	2.50	3.15	0.00	0.00	2.35	0.781510	1.000000	-
Rv2095c	-	15	286.69	283.02	271.02	269.63	246.53	248.26	0.963327	1.000000	-
Rv2096c	-	15	117.48	133.93	122.22	146.24	133.12	147.81	0.928749	1.000000	-
Rv2097c	-	21	41.80	75.54	44.87	61.47	69.13	60.38	0.370071	1.000000	-
Rv2100	-	19	264.52	274.43	293.09	263.91	259.69	255.75	0.998948	1.000000	-
Rv2101	helZ	28	260.08	242.78	251.64	245.32	246.36	234.34	0.998013	1.000000	-
Rv2102	-	12	166.45	151.94	156.85	138.53	156.42	154.17	0.989256	1.000000	-
Rv2103c	-	5	448.89	327.80	325.86	287.78	279.80	255.32	0.625766	1.000000	-
Rv2104c	-	1	97.44	82.50	84.30	106.87	110.90	115.45	1.000000	1.000000	TA sites <= 1
Rv2105	-	4	196.21	237.22	210.03	237.33	235.32	182.92	0.892318	1.000000	-
Rv2106	-	25	290.69	300.26	334.59	317.14	290.15	304.51	0.937937	1.000000	-
Rv2107	PE22	9	15.43	21.58	17.78	22.20	26.77	37.51	0.013617	0.232190	-
Rv2108	PPE36	21	119.35	115.40	114.25	111.19	94.74	109.95	0.953830	1.000000	-
Rv2109c	prcA	18	17.27	32.71	12.11	15.24	22.26	19.46	0.012311	0.214508	-
Rv2110c	prcB	18	7.83	19.21	11.63	9.12	23.62	14.92	0.002199	0.048746	-
Rv2111c	-	1	0.00	35.80	0.00	9.73	20.75	19.50	1.000000	1.000000	TA sites <= 1
Rv2112c	-	32	39.18	67.40	47.87	51.68	64.62	59.43	0.006307	0.122151	-
Rv2113	-	11	127.35	140.39	152.05	138.85	173.09	124.78	0.835668	1.000000	-
Rv2114	-	14	151.35	140.78	152.41	128.27	141.73	158.40	0.929967	1.000000	-
Rv2115c	-	29	29.48	46.99	27.73	49.36	52.40	45.52	0.000013	0.000442	-
Rv2116	lppK	6	91.43	104.10	75.80	117.20	124.60	93.10	0.887636	1.000000	-
Rv2117	-	2	121.84	61.07	134.47	123.55	125.40	135.71	0.203636	1.000000	-
Rv2118c	-	14	189.38	188.52	202.31	182.64	188.23	190.31	0.995363	1.000000	-
Rv2119	-	20	176.82	183.69	169.94	176.48	170.66	159.18	0.979871	1.000000	-
Rv2120c	-	8	187.21	203.67	182.45	219.25	179.21	161.18	0.995485	1.000000	-
Rv2121c	hisG	9	0.43	0.00	0.00	0.55	0.81	0.00	0.766732	1.000000	-
Rv2122c	hisE	3	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv2123	PPE37	22	136.67	143.86	151.22	3.00	3.73	150.77	0.000000	0.000001	-
Rv2124c	metH	44	111.70	116.94	112.13	119.65	111.05	122.60	0.960639	1.000000	-
Rv2125	-	10	169.69	149.71	159.98	158.74	164.36	148.50	0.998646	1.000000	-
Rv2126c	PE_PGRS37	6	306.34	291.93	339.17	226.81	243.58	213.39	0.912151	1.000000	-
Rv2127	ansP1	26	128.74	106.13	121.21	69.74	75.06	97.45	0.111790	1.000000	-
Rv2128	-	6	33.22	31.30	23.42	24.45	21.52	37.02	0.594074	1.000000	-
Rv2129c	-	13	234.45	226.91	246.93	212.18	180.06	171.93	0.863146	1.000000	-
Rv2130c	cysS	24	29.82	26.85	35.87	11.43	26.24	19.52	0.000027	0.000929	-
Rv2131c	cysQ	9	108.10	160.22	71.47	169.01	163.93	127.46	0.104792	1.000000	-
Rv2132	-	2	148.36	144.35	199.54	117.82	197.25	187.81	0.560017	1.000000	-
Rv2133c	-	9	206.72	196.44	204.54	137.97	138.67	197.80	0.439403	1.000000	-
Rv2134c	-	8	123.63	146.31	136.00	118.87	121.70	165.56	0.862516	1.000000	-
Rv2135c	-	5	94.51	87.49	76.85	96.42	139.35	113.76	0.207175	1.000000	-
Rv2136c	uppP	14	101.30	114.35	106.94	98.05	115.50	123.07	0.988228	1.000000	-
Rv2137c	-	6	131.31	102.80	121.38	132.09	104.66	112.11	0.921607	1.000000	-
Rv2138	lppL	20	25.41	38.06	23.71	28.88	40.12	32.78	0.489780	1.000000	-
Rv2139	pyrD	13	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv2140c	TB18.6	11	135.54	163.81	126.25	158.70	125.71	172.05	0.922997	1.000000	-
Rv2141c	-	21	147.00	127.41	133.36	135.11	122.69	131.74	0.983057	1.000000	-
Rv2142c	-	13	276.57	205.07	241.13	237.74	219.89	249.68	0.957996	1.000000	-
Rv2143	-	14	273.83	258.41	278.70	270.53	257.13	266.49	0.999640	1.000000	-
Rv2144c	-	4	100.96	141.35	121.16	122.84	179.05	136.14	0.675527	1.000000	-
Rv2145c	wag31	11	0.00	0.90	1.41	0.00	0.41	1.41	0.502177	1.000000	-
Rv2146c	-	1	255.78	378.49	275.24	264.87	295.95	303.96	1.000000	1.000000	TA sites <= 1
Rv2147c	-	19	43.91	41.46	40.11	31.68	29.52	32.62	0.987943	1.000000	-
Rv2148c	-	9	119.06	112.38	106.10	101.16	106.54	104.30	0.999312	1.000000	-
Rv2149c	yfiH	7	184.94	147.43	197.84	186.39	188.32	194.96	0.904256	1.000000	-
Rv2150c	ftsZ	8	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv2151c	ftsQ	7	29.76	45.17	56.86	34.92	36.36	43.12	0.948118	1.000000	-
Rv2152c	murC	14	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv2153c	murG	14	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv2154c	ftsW	18	57.34	39.56	52.72	52.19	48.59	51.09	0.998822	1.000000	-
Rv2155c	murD	20	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv2156c	mraY	12	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv2157c	murF	10	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv2158c	murE	11	1.37	0.47	0.00	0.00	0.00	0.00	0.266135	1.000000	-
Rv2159c	-	6	228.24	259.53	240.82	208.16	193.29	216.93	0.728407	1.000000	-
Rv2160A	-	6	165.28	164.37	171.85	123.84	174.72	161.06	0.875092	1.000000	-
Rv2160c	-	3	144.88	154.63	152.15	122.97	187.99	169.49	0.921724	1.000000	-
Rv2161c	-	8	300.35	270.37	281.37	221.76	212.56	268.72	0.547257	1.000000	-
Rv2162c	PE_PGRS38	14	214.90	188.47	197.43	197.35	190.66	179.34	0.972115	1.000000	-
Rv2163c	pbpB	29	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv2164c	-	10	6.75	7.66	3.44	9.34	8.84	6.81	0.940283	1.000000	-
Rv2165c	mraW	19	23.22	33.75	30.94	29.61	33.61	21.00	0.479539	1.000000	-
Rv2166c	-	8	5.90	17.79	13.26	11.81	12.52	14.02	0.682907	1.000000	-
Rv2167c	-	26	281.53	292.95	311.89	302.41	303.21	302.55	0.988767	1.000000	-
Rv2168c	-	4	193.56	230.71	214.34	261.81	212.98	147.22	0.492614	1.000000	-
Rv2169c	-	5	7.48	25.24	12.50	41.37	64.43	23.36	0.002459	0.053327	-
Rv2170	-	14	174.41	158.11	165.61	132.33	128.02	130.69	0.615623	1.000000	-
Rv2171	lppM	8	97.62	93.47	101.13	93.70	91.03	84.22	0.998193	1.000000	-
Rv2172c	-	17	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv2173	idsA2	18	49.76	30.97	49.95	48.76	57.49	33.68	0.351439	1.000000	-
Rv2174	-	27	22.38	18.65	17.01	21.62	21.25	17.91	0.997984	1.000000	-
Rv2175c	-	7	146.10	162.97	174.49	173.03	155.60	168.64	0.982257	1.000000	-
Rv2176	pknL	23	97.39	77.06	77.22	87.11	88.22	91.53	0.892424	1.000000	-
Rv2177c	-	7	203.50	162.73	202.01	217.04	179.54	193.54	0.974983	1.000000	-
Rv2178c	aroG	16	0.00	0.31	0.00	0.31	0.00	0.00	0.629897	1.000000	-
Rv2179c	-	7	11.71	19.54	41.96	81.64	81.88	10.99	0.000000	0.000000	-
Rv2180c	-	11	226.51	186.71	199.30	225.98	198.90	187.58	0.997424	1.000000	-
Rv2181	-	20	156.04	143.62	160.70	176.77	167.40	127.53	0.891883	1.000000	-
Rv2182c	-	21	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv2183c	-	6	80.02	82.19	87.36	96.77	69.35	86.96	0.936768	1.000000	-
Rv2184c	-	18	127.59	138.15	119.98	140.26	128.72	115.89	0.937799	1.000000	-
Rv2185c	TB16.3	13	69.80	95.99	57.60	83.09	83.02	81.53	0.537268	1.000000	-
Rv2186c	-	9	0.61	1.13	0.70	0.55	0.81	1.64	0.892551	1.000000	-
Rv2187	fadD15	34	140.70	120.81	126.50	123.99	116.69	134.65	0.820508	1.000000	-
Rv2188c	-	19	0.00	0.00	0.33	0.00	0.00	0.00	0.307323	1.000000	-
Rv2189c	-	11	95.43	104.91	106.65	64.00	87.31	75.88	0.770354	1.000000	-
Rv2190c	-	20	105.80	117.14	84.07	103.94	100.15	94.59	0.662581	1.000000	-
Rv2191	-	26	255.51	257.76	263.03	243.52	223.87	215.68	0.935570	1.000000	-
Rv2192c	trpD	7	0.00	0.71	0.90	0.00	0.00	0.00	0.412744	1.000000	-
Rv2193	ctaE	17	6.30	5.11	5.16	1.68	2.17	4.21	0.084099	0.934693	-
Rv2194	qcrC	12	3.48	5.96	5.73	1.54	0.75	3.50	0.081665	0.916326	-
Rv2195	qcrA	22	11.63	10.12	10.11	5.69	5.01	14.28	0.848912	1.000000	-
Rv2196	qcrB	30	11.42	10.35	9.98	7.59	6.44	11.07	0.929359	1.000000	-
Rv2197c	-	12	159.66	133.95	170.27	126.23	148.99	115.34	0.689702	1.000000	-
Rv2198c	mmpS3	14	13.93	29.88	27.20	37.83	58.70	12.66	0.000000	0.000001	-
Rv2199c	-	8	52.37	52.89	61.00	60.61	42.76	56.40	0.996899	1.000000	-
Rv2200c	ctaC	20	6.44	2.05	3.16	3.08	2.93	3.85	0.622016	1.000000	-
Rv2201	asnB	29	0.13	0.00	0.00	0.00	0.00	0.16	0.607284	1.000000	-
Rv2202c	cbhK	19	8.55	17.68	11.20	26.23	46.17	12.08	0.000000	0.000000	-
Rv2203	-	14	232.64	247.43	249.86	277.06	257.29	214.36	0.898363	1.000000	-
Rv2204c	-	4	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv2205c	-	13	96.59	96.09	99.25	107.67	106.70	93.92	0.991791	1.000000	-
Rv2206	-	9	128.43	93.60	87.56	105.60	90.59	103.04	0.350044	1.000000	-
Rv2207	cobT	8	157.52	146.71	154.25	102.00	96.34	107.51	0.058362	0.718719	-
Rv2208	cobS	9	96.42	78.01	107.30	75.37	99.85	102.98	0.860311	1.000000	-
Rv2209	-	25	221.47	233.95	242.84	218.53	226.29	230.20	0.984148	1.000000	-
Rv2210c	ilvE	22	14.20	12.60	10.22	6.91	1.35	20.77	0.000001	0.000024	-
Rv2211c	gcvT	18	12.37	24.37	8.16	34.78	33.06	21.85	0.000256	0.007036	-
Rv2212	-	10	209.00	170.01	169.17	202.21	223.78	169.41	0.937285	1.000000	-
Rv2213	pepB	15	193.76	192.85	225.75	213.06	206.56	186.46	0.956013	1.000000	-
Rv2214c	ephD	31	124.78	105.69	141.05	112.12	132.43	83.16	0.154312	1.000000	-
Rv2215	dlaT	15	12.94	9.23	8.99	7.38	8.66	9.35	0.974565	1.000000	-
Rv2216	-	12	353.69	279.03	295.04	288.43	274.76	299.09	0.994064	1.000000	-
Rv2217	lipB	12	69.35	90.84	77.14	50.06	35.03	72.84	0.724448	1.000000	-
Rv2218	lipA	14	6.30	12.37	8.27	7.44	8.56	10.57	0.973266	1.000000	-
Rv2219	-	8	8.87	19.69	10.18	12.85	11.84	10.94	0.839885	1.000000	-
Rv2219A	-	3	166.14	122.23	110.68	99.24	130.02	118.94	0.688488	1.000000	-
Rv2220	glnA1	29	0.27	0.17	0.00	0.00	0.00	0.00	0.654525	1.000000	-
Rv2221c	glnE	39	5.44	7.31	7.93	1.19	1.11	4.31	0.000048	0.001533	-
Rv2222c	glnA2	20	129.15	214.35	158.19	204.26	254.24	171.75	0.016590	0.267985	-
Rv2223c	-	29	221.12	194.01	197.04	210.84	203.89	217.96	0.947769	1.000000	-
Rv2224c	-	29	226.45	218.64	204.62	240.65	243.55	198.59	0.621860	1.000000	-
Rv2225	panB	15	114.10	122.20	118.94	118.35	117.36	145.47	0.872556	1.000000	-
Rv2226	-	25	140.10	140.28	145.26	139.32	151.47	121.46	0.956911	1.000000	-
Rv2227	-	19	98.47	109.61	116.72	119.57	113.56	110.51	0.986560	1.000000	-
Rv2228c	-	19	13.64	20.70	15.60	12.68	18.43	17.28	0.632762	1.000000	-
Rv2229c	-	5	26.42	14.29	29.24	28.57	14.79	11.20	0.502606	1.000000	-
Rv2230c	-	16	77.73	79.55	81.72	69.58	89.05	65.37	0.880385	1.000000	-
Rv2231c	cobC	16	106.68	75.98	77.28	88.06	87.98	77.63	0.665927	1.000000	-
Rv2232	-	11	86.30	90.52	86.71	99.46	99.84	67.48	0.797060	1.000000	-
Rv2234	ptpA	7	71.58	57.46	49.16	76.31	71.90	63.47	0.787182	1.000000	-
Rv2235	-	16	5.10	10.81	10.93	0.84	2.20	8.34	0.002964	0.063246	-
Rv2236c	cobD	12	51.56	57.59	67.34	65.12	60.20	49.84	0.861175	1.000000	-
Rv2237	-	17	118.32	103.08	120.71	105.67	106.49	125.31	0.952369	1.000000	-
Rv2238c	ahpE	5	24.81	23.63	43.82	38.65	45.46	44.87	0.674695	1.000000	-
Rv2239c	-	4	45.24	88.71	61.79	125.38	178.40	37.53	0.025874	0.376412	-
Rv2240c	-	11	197.55	212.40	231.35	264.78	208.09	167.42	0.652320	1.000000	-
Rv2241	aceE	57	39.74	60.19	27.10	34.72	25.83	45.66	0.000004	0.000143	-
Rv2242	-	17	4.11	4.77	5.16	3.56	7.64	2.47	0.921242	1.000000	-
Rv2243	fabD	6	6.92	6.76	12.52	12.66	24.52	11.34	0.762353	1.000000	-
Rv2244	acpP	6	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv2245	kasA	16	0.71	2.55	0.39	1.45	2.42	1.65	0.748073	1.000000	-
Rv2246	kasB	18	0.52	1.42	1.56	3.37	8.93	2.21	0.000147	0.004307	-
Rv2247	accD6	13	0.00	0.00	0.48	0.00	1.25	0.42	0.079497	0.906270	-
Rv2248	-	12	51.44	55.95	53.02	64.59	47.21	61.28	0.845766	1.000000	-
Rv2249c	glpD1	20	97.65	75.17	89.55	72.65	75.35	88.10	0.693185	1.000000	-
Rv2250c	-	11	163.16	147.87	151.41	149.18	139.00	146.22	0.993193	1.000000	-
Rv2250A	-	3	75.47	37.33	61.56	48.27	74.92	22.68	0.144330	1.000000	-
Rv2251	-	9	128.76	75.92	123.18	103.18	100.61	83.48	0.252138	1.000000	-
Rv2252	-	17	27.20	30.42	37.95	23.44	33.63	24.63	0.499486	1.000000	-
Rv2253	-	12	15.34	21.23	17.49	23.52	32.64	30.42	0.558594	1.000000	-
Rv2254c	-	6	139.88	36.33	110.28	119.21	135.14	72.33	0.522373	1.000000	-
Rv2255c	-	1	68.24	77.30	108.95	122.80	45.95	30.35	1.000000	1.000000	TA sites <= 1
Rv2256c	-	6	0.00	4.22	5.26	0.00	0.00	2.47	0.046436	0.593840	-
Rv2257c	-	9	148.79	160.58	151.47	96.31	111.46	154.31	0.405387	1.000000	-
Rv2258c	-	15	244.78	224.60	235.70	193.30	182.64	211.53	0.682380	1.000000	-
Rv2259	adhE2	14	55.05	54.13	66.73	54.38	54.27	66.82	0.939709	1.000000	-
Rv2260	-	6	68.83	84.15	114.98	95.74	108.58	105.45	0.784568	1.000000	-
Rv2261c	-	6	205.55	246.35	229.08	238.80	306.89	242.90	0.386397	1.000000	-
Rv2262c	-	14	223.60	237.34	232.90	214.79	203.88	201.03	0.991105	1.000000	-
Rv2263	-	13	236.11	196.72	205.88	229.62	218.00	217.92	0.944520	1.000000	-
Rv2264c	-	32	150.88	167.53	147.74	169.01	146.89	166.32	0.912157	1.000000	-
Rv2265	-	16	175.75	158.65	137.31	160.28	149.32	165.25	0.750367	1.000000	-
Rv2266	cyp124	17	133.42	118.15	120.69	129.92	121.26	141.54	0.880132	1.000000	-
Rv2267c	-	37	26.29	26.62	21.74	27.54	29.09	29.51	0.793837	1.000000	-
Rv2268c	cyp128	28	58.03	58.43	68.92	62.24	53.88	47.10	0.667348	1.000000	-
Rv2269c	-	12	92.88	122.65	119.15	127.26	108.93	110.45	0.949218	1.000000	-
Rv2270	lppN	11	88.52	99.64	96.50	87.51	92.17	101.49	0.967521	1.000000	-
Rv2271	-	6	98.25	104.24	102.45	97.19	118.52	115.09	0.955740	1.000000	-
Rv2272	-	4	94.24	78.70	64.97	92.83	53.89	51.64	0.587541	1.000000	-
Rv2273	-	5	169.71	157.15	139.03	132.88	105.72	150.27	0.687817	1.000000	-
Rv2274c	-	8	25.01	45.24	41.72	35.73	31.71	46.22	0.325993	1.000000	-
Rv2275	-	19	46.95	53.38	60.46	54.17	52.04	48.75	0.914688	1.000000	-
Rv2276	cyp121	17	46.86	46.11	40.49	41.81	36.16	44.73	0.963707	1.000000	-
Rv2277c	-	12	74.13	61.25	52.81	64.29	72.10	88.59	0.745791	1.000000	-
Rv2278	-	4	220.15	229.35	208.14	226.05	210.09	156.71	0.886433	1.000000	-
Rv2279	-	25	301.21	310.87	338.21	323.08	309.53	322.23	0.981468	1.000000	-
Rv2280	-	18	64.20	54.19	58.93	60.50	63.05	52.23	0.970368	1.000000	-
Rv2281	pitB	26	52.39	71.69	72.54	53.95	60.02	66.49	0.587092	1.000000	-
Rv2282c	-	13	84.41	47.94	49.01	51.04	63.30	43.84	0.186125	1.000000	-
Rv2283	-	2	81.24	32.97	47.02	32.82	35.60	47.23	0.282879	1.000000	-
Rv2284	lipM	28	94.45	91.77	92.49	93.78	97.24	87.19	0.993711	1.000000	-
Rv2285	-	22	119.41	122.99	111.25	121.43	126.16	120.45	0.990364	1.000000	-
Rv2286c	-	10	173.03	130.94	162.11	168.42	151.87	154.11	0.967164	1.000000	-
Rv2287	yjcE	20	165.07	140.53	155.69	151.15	149.54	135.77	0.967721	1.000000	-
Rv2288	-	4	92.41	114.56	102.93	89.35	103.49	93.10	0.950888	1.000000	-
Rv2289	cdh	22	121.51	132.18	127.03	151.47	133.64	134.49	0.950495	1.000000	-
Rv2290	lppO	13	91.93	100.24	102.56	93.81	91.39	99.02	0.999128	1.000000	-
Rv2291	sseB	16	105.03	90.67	108.35	128.75	120.92	95.09	0.398940	1.000000	-
Rv2292c	-	2	89.97	56.32	122.15	74.72	61.33	73.85	0.731714	1.000000	-
Rv2293c	-	14	46.85	57.76	53.50	57.19	62.50	79.56	0.353936	1.000000	-
Rv2294	-	23	146.28	151.33	138.48	145.03	144.35	169.05	0.921825	1.000000	-
Rv2295	-	11	37.79	33.90	33.83	47.03	33.40	53.19	0.576361	1.000000	-
Rv2296	-	16	151.96	155.39	127.07	157.25	142.34	156.04	0.948196	1.000000	-
Rv2297	-	8	73.98	88.02	81.64	88.96	85.05	87.25	0.997907	1.000000	-
Rv2298	-	17	222.78	188.78	204.25	202.11	216.96	193.96	0.892160	1.000000	-
Rv2299c	htpG	29	123.49	139.86	130.59	123.74	123.83	137.11	0.965224	1.000000	-
Rv2300c	-	17	43.69	61.38	45.44	49.87	47.70	46.51	0.847204	1.000000	-
Rv2301	cut2	10	236.62	212.79	229.67	211.87	227.23	243.77	0.968896	1.000000	-
Rv2302	-	4	399.95	373.82	369.19	264.47	324.77	341.73	0.805740	1.000000	-
Rv2303c	-	19	156.41	136.38	129.09	134.14	132.92	144.10	0.961264	1.000000	-
Rv2304c	-	1	102.00	181.95	160.05	122.34	160.60	116.90	1.000000	1.000000	TA sites <= 1
Rv2305	-	10	200.87	236.35	162.23	187.96	203.09	224.72	0.710442	1.000000	-
Rv2306A	-	8	362.14	338.41	348.21	368.08	325.93	330.77	0.997957	1.000000	-
Rv2306B	-	5	158.23	158.14	144.73	114.68	121.56	129.32	0.893250	1.000000	-
Rv2307c	-	20	143.96	151.32	150.59	162.45	159.87	165.88	0.911940	1.000000	-
Rv2307A	-	3	306.29	323.51	286.32	216.38	377.79	300.88	0.848335	1.000000	-
Rv2307B	-	21	39.18	30.59	56.18	46.79	40.75	53.91	0.112850	1.000000	-
Rv2307D	-	5	113.40	115.62	113.23	106.07	125.31	149.03	0.822223	1.000000	-
Rv2308	-	17	32.17	36.26	30.36	30.26	33.23	37.68	0.979046	1.000000	-
Rv2309c	-	9	67.56	79.88	70.92	88.02	104.30	85.23	0.923967	1.000000	-
Rv2309A	-	13	131.37	145.04	126.61	141.78	146.91	156.84	0.971444	1.000000	-
Rv2310	-	3	119.28	86.65	99.98	130.45	96.83	61.64	0.391239	1.000000	-
Rv2311	-	7	388.75	331.75	335.06	318.90	337.00	310.66	0.628695	1.000000	-
Rv2312	-	3	255.22	251.10	228.43	241.96	184.40	213.51	0.970542	1.000000	-
Rv2313c	-	10	271.04	267.85	261.65	300.89	291.78	278.11	0.996687	1.000000	-
Rv2314c	-	16	144.06	154.98	192.58	170.79	147.20	167.30	0.944386	1.000000	-
Rv2315c	-	33	70.69	59.41	67.95	63.98	60.86	64.92	0.968275	1.000000	-
Rv2316	uspA	13	161.52	133.72	156.34	137.74	131.94	142.61	0.969984	1.000000	-
Rv2317	uspB	14	42.03	37.85	67.18	48.65	41.82	42.48	0.203290	1.000000	-
Rv2318	uspC	30	44.54	52.37	51.82	44.38	41.08	48.48	0.812032	1.000000	-
Rv2319c	-	19	100.77	83.88	106.35	89.24	98.33	79.85	0.839971	1.000000	-
Rv2320c	rocE	28	79.93	76.89	73.72	68.98	81.40	83.55	0.933616	1.000000	-
Rv2321c	rocD2	9	68.09	52.81	50.72	80.61	61.34	53.70	0.654458	1.000000	-
Rv2322c	rocD1	10	71.82	70.01	59.99	67.56	56.17	76.70	0.920610	1.000000	-
Rv2323c	-	22	127.42	146.64	137.18	122.97	129.15	136.88	0.971272	1.000000	-
Rv2324	-	2	617.09	495.07	648.28	337.54	299.90	323.16	0.337317	1.000000	-
Rv2325c	-	9	91.67	144.59	104.49	100.17	126.86	86.65	0.353353	1.000000	-
Rv2326c	-	23	125.41	120.51	113.94	131.65	136.82	137.94	0.940075	1.000000	-
Rv2327	-	5	59.50	55.98	78.80	48.26	41.86	52.68	0.811040	1.000000	-
Rv2328	PE23	12	85.96	76.04	54.67	70.55	81.81	69.14	0.880162	1.000000	-
Rv2329c	narK1	28	89.75	93.40	91.51	94.48	98.25	90.34	0.997212	1.000000	-
Rv2330c	lppP	7	33.93	37.11	36.22	38.58	38.43	52.25	0.408649	1.000000	-
Rv2331	-	6	111.29	104.06	97.60	107.39	92.40	154.92	0.685267	1.000000	-
Rv2331A	-	5	121.85	121.20	119.97	98.59	106.10	109.14	0.983901	1.000000	-
Rv2332	mez	28	147.04	130.96	121.22	128.18	116.99	130.43	0.863759	1.000000	-
Rv2333c	-	21	214.47	229.63	244.23	206.24	244.72	221.52	0.833907	1.000000	-
Rv2334	cysK1	14	88.29	55.43	109.83	67.46	78.33	70.92	0.091119	0.996064	-
Rv2335	cysE	6	167.03	66.78	172.35	105.22	128.17	101.31	0.295557	1.000000	-
Rv2336	-	29	24.59	34.02	29.07	35.41	30.54	36.70	0.648142	1.000000	-
Rv2337c	-	10	186.17	224.45	210.69	187.39	179.53	175.30	0.945192	1.000000	-
Rv2338c	moeW	38	21.11	28.80	26.26	27.68	29.27	31.21	0.360583	1.000000	-
Rv2339	mmpL9	82	51.21	60.45	65.97	62.74	66.26	70.10	0.483488	1.000000	-
Rv2340c	PE_PGRS39	16	236.45	262.27	243.75	239.11	247.30	244.44	0.999023	1.000000	-
Rv2341	lppQ	4	282.38	272.16	316.28	310.12	264.33	264.55	0.997843	1.000000	-
Rv2342	-	4	214.46	208.96	242.85	205.86	241.60	176.87	0.857724	1.000000	-
Rv2343c	dnaG	26	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv2344c	dgt	27	131.13	165.21	131.80	139.64	148.20	149.00	0.947637	1.000000	-
Rv2345	-	29	378.57	380.19	345.93	366.07	335.98	350.57	0.951408	1.000000	-
Rv2346c	esxO	3	244.59	344.76	313.49	265.62	265.19	320.51	0.422590	1.000000	-
Rv2347c	esxP	3	178.84	161.35	148.90	144.99	152.20	153.54	0.986803	1.000000	-
Rv2348c	-	2	129.16	117.27	132.47	88.49	88.83	131.36	0.548326	1.000000	-
Rv2349c	plcC	28	163.47	183.03	138.12	147.65	152.86	175.28	0.739750	1.000000	-
Rv2350c	plcB	23	137.09	138.63	114.00	125.21	144.00	143.26	0.804177	1.000000	-
Rv2351c	plcA	25	248.64	249.29	256.08	245.35	242.81	224.93	0.998823	1.000000	-
Rv2352c	PPE38	16	338.23	303.95	326.61	351.94	348.49	313.76	0.992171	1.000000	-
Rv2353c	PPE39	24	11.07	11.67	13.02	11.01	12.08	13.22	0.986726	1.000000	-
Rv2354	-	4	186.02	242.98	199.87	255.17	208.96	160.84	0.665283	1.000000	-
Rv2355	-	25	291.13	291.58	328.69	322.63	299.06	304.46	0.948023	1.000000	-
Rv2356c	PPE40	30	109.01	94.46	105.93	91.19	88.26	104.13	0.987641	1.000000	-
Rv2357c	glyS	31	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv2358	-	5	94.52	97.32	79.12	1.85	2.35	83.10	0.000064	0.001980	-
Rv2359	furB	5	83.65	88.70	59.43	0.96	0.00	81.71	0.000153	0.004433	-
Rv2360c	-	6	306.05	286.03	342.82	261.50	278.23	235.63	0.878875	1.000000	-
Rv2361c	-	17	3.65	1.19	3.14	1.15	3.71	4.17	0.871204	1.000000	-
Rv2362c	recO	11	149.10	133.67	141.07	157.88	162.04	129.00	0.939392	1.000000	-
Rv2363	amiA2	17	95.23	149.17	102.21	147.24	145.33	112.86	0.296400	1.000000	-
Rv2364c	era	15	0.00	3.04	0.84	0.94	0.30	1.03	0.003504	0.072818	-
Rv2365c	-	4	155.48	162.60	132.05	142.85	84.79	119.87	0.852084	1.000000	-
Rv2366c	-	22	109.03	119.17	93.95	109.50	108.89	99.11	0.936401	1.000000	-
Rv2367c	-	9	40.54	45.65	41.03	48.64	36.91	32.95	0.997070	1.000000	-
Rv2368c	phoH1	17	155.06	148.11	159.90	135.95	146.88	164.66	0.922659	1.000000	-
Rv2369c	-	3	136.98	147.76	147.23	186.63	120.30	187.19	0.870215	1.000000	-
Rv2370c	-	20	189.18	170.61	177.29	183.80	187.74	186.24	0.997840	1.000000	-
Rv2371	PE_PGRS40	1	18.70	0.00	6.30	0.00	26.20	0.00	1.000000	1.000000	TA sites <= 1
Rv2372c	-	6	375.67	307.34	323.05	316.84	311.56	308.17	0.991593	1.000000	-
Rv2373c	dnaJ2	10	14.14	17.80	12.57	5.63	3.53	17.90	0.004645	0.092662	-
Rv2374c	hrcA	23	54.47	53.97	54.51	48.25	34.20	46.73	0.484318	1.000000	-
Rv2375	-	9	138.77	164.25	149.56	156.36	183.10	189.81	0.881900	1.000000	-
Rv2376c	cfp2	2	681.41	679.32	794.17	579.88	494.53	572.32	0.019027	0.301624	-
Rv2377c	mbtH	2	322.91	213.47	270.07	244.07	175.95	180.23	0.944566	1.000000	-
Rv2378c	mbtG	9	224.69	180.60	187.58	193.22	191.10	207.84	0.989171	1.000000	-
Rv2379c	mbtF	64	157.82	152.04	155.39	145.37	154.33	137.38	0.913022	1.000000	-
Rv2380c	mbtE	79	148.90	138.45	140.09	141.33	132.15	138.18	0.951960	1.000000	-
Rv2381c	mbtD	43	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv2382c	mbtC	17	140.41	147.12	131.83	164.69	152.14	164.08	0.616864	1.000000	-
Rv2383c	mbtB	50	171.47	195.49	185.15	195.84	185.18	177.34	0.871504	1.000000	-
Rv2384	mbtA	21	184.80	208.51	166.34	192.37	192.86	187.96	0.904193	1.000000	-
Rv2385	mbtJ	19	106.20	135.20	118.10	153.24	157.23	135.83	0.191737	1.000000	-
Rv2386c	mbtI	18	35.36	50.89	32.66	46.48	55.65	65.32	0.126568	1.000000	-
Rv2387	-	24	187.70	190.65	172.54	192.26	189.51	187.36	0.996518	1.000000	-
Rv2388c	hemN	20	215.73	227.30	216.24	231.74	212.81	246.71	0.987768	1.000000	-
Rv2389c	rpfD	10	146.93	157.14	167.32	177.01	184.14	170.19	0.948253	1.000000	-
Rv2390c	-	6	81.88	70.60	77.71	82.42	96.27	88.81	0.994879	1.000000	-
Rv2391	nirA	19	58.63	49.08	65.83	52.05	58.56	28.94	0.180875	1.000000	-
Rv2392	cysH	13	45.23	16.82	41.39	45.54	41.29	13.60	0.018798	0.300018	-
Rv2393	-	7	49.77	77.11	54.48	66.17	43.12	50.96	0.856773	1.000000	-
Rv2394	ggtB	30	147.44	136.92	158.49	136.31	149.56	140.81	0.955803	1.000000	-
Rv2395	-	37	167.58	145.38	172.01	140.94	154.24	171.71	0.949767	1.000000	-
Rv2396	PE_PGRS41	14	242.85	234.82	250.35	215.67	221.86	213.80	0.994276	1.000000	-
Rv2397c	cysA1	15	70.33	48.37	79.64	108.93	92.75	34.40	0.000116	0.003458	-
Rv2398c	cysW	18	45.05	36.71	67.97	70.05	65.73	35.01	0.061881	0.750114	-
Rv2399c	cysT	10	65.03	40.65	55.63	81.51	82.49	41.49	0.427711	1.000000	-
Rv2400c	subI	19	67.07	55.66	66.71	111.75	100.07	43.95	0.000201	0.005613	-
Rv2401	-	4	163.49	168.16	123.30	193.64	205.61	176.27	0.926117	1.000000	-
Rv2401A	-	1	5.47	0.00	0.00	0.00	9.00	0.00	1.000000	1.000000	TA sites <= 1
Rv2402	-	28	170.88	162.81	175.08	183.24	178.75	163.77	0.952031	1.000000	-
Rv2403c	lppR	7	20.50	37.11	33.42	38.12	35.46	30.48	0.539411	1.000000	-
Rv2404c	lepA	30	217.55	168.91	193.92	150.81	139.54	179.94	0.394773	1.000000	-
Rv2405	-	9	180.35	174.75	139.54	166.91	144.96	133.63	0.726456	1.000000	-
Rv2406c	-	8	199.92	207.06	185.15	193.72	185.40	176.96	0.983897	1.000000	-
Rv2407	-	10	241.32	189.69	210.50	208.95	220.41	204.85	0.988488	1.000000	-
Rv2408	PE24	16	122.93	138.11	115.99	137.24	148.92	139.56	0.885691	1.000000	-
Rv2409c	-	20	98.44	103.86	100.44	134.44	110.09	115.94	0.209323	1.000000	-
Rv2410c	-	11	155.86	148.95	154.63	186.04	153.23	143.11	0.962443	1.000000	-
Rv2411c	-	24	174.79	158.38	151.12	181.03	200.82	162.92	0.837733	1.000000	-
Rv2412	rpsT	1	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	TA sites <= 1
Rv2413c	-	13	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv2414c	-	12	239.65	188.63	223.98	240.78	213.84	189.84	0.983189	1.000000	-
Rv2415c	-	14	111.16	105.23	127.22	129.15	122.88	95.68	0.725415	1.000000	-
Rv2416c	eis	28	88.38	81.26	99.56	92.94	83.20	75.97	0.836203	1.000000	-
Rv2417c	-	12	159.70	146.29	152.07	158.96	125.67	142.87	0.975721	1.000000	-
Rv2418c	-	21	10.07	25.62	9.70	25.82	25.21	13.48	0.004416	0.088543	-
Rv2419c	-	7	89.71	110.55	121.08	163.72	136.34	121.18	0.431008	1.000000	-
Rv2420c	-	5	13.55	13.28	11.81	15.99	14.09	16.99	0.989556	1.000000	-
Rv2421c	nadD	14	0.83	0.00	0.00	0.00	0.32	0.00	0.653047	1.000000	-
Rv2422	-	4	79.58	130.02	112.52	104.98	96.74	131.61	0.543534	1.000000	-
Rv2423	-	18	218.37	236.62	207.12	204.31	213.42	234.33	0.970303	1.000000	-
Rv2424c	-	7	209.50	174.42	203.09	211.99	185.19	182.36	0.989880	1.000000	-
Rv2425c	-	18	157.71	147.17	132.98	151.02	149.15	140.33	0.955706	1.000000	-
Rv2426c	-	10	208.30	216.72	182.02	162.82	151.14	158.31	0.761309	1.000000	-
Rv2427c	proA	16	251.61	226.10	223.98	208.25	156.12	190.85	0.753301	1.000000	-
Rv2428	ahpC	9	47.92	73.43	42.62	57.59	44.82	44.84	0.811473	1.000000	-
Rv2429	ahpD	13	79.76	106.16	68.69	91.56	85.32	102.86	0.199133	1.000000	-
Rv2430c	PPE41	10	117.77	100.47	100.30	152.33	144.58	136.70	0.365598	1.000000	-
Rv2431c	PE25	6	95.79	89.41	98.46	114.41	94.38	99.91	0.943058	1.000000	-
Rv2432c	-	7	93.46	90.21	132.14	130.10	139.72	119.00	0.561248	1.000000	-
Rv2433c	-	6	184.17	132.31	147.95	137.19	124.91	129.16	0.920881	1.000000	-
Rv2434c	-	25	45.65	52.50	49.87	55.76	42.87	52.77	0.858647	1.000000	-
Rv2435c	-	56	39.69	46.03	50.58	50.44	47.36	52.61	0.435512	1.000000	-
Rv2436	rbsK	12	130.86	127.06	115.16	109.58	115.90	102.65	0.975537	1.000000	-
Rv2437	-	9	41.88	42.61	52.12	36.93	42.09	39.68	0.921040	1.000000	-
Rv2438c	nadE	39	0.00	0.00	0.00	0.00	0.19	0.00	0.306755	1.000000	-
Rv2438A	-	5	26.69	62.77	50.13	55.55	27.43	35.96	0.659971	1.000000	-
Rv2439c	proB	12	4.39	3.40	3.40	2.74	4.89	11.45	0.110136	1.000000	-
Rv2440c	obgE	12	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv2441c	rpmA	4	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv2442c	rplU	4	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv2443	dctA	21	195.11	202.82	182.59	201.38	203.91	208.54	0.988332	1.000000	-
Rv2444c	rne	32	6.57	9.18	7.33	9.55	11.20	8.33	0.965006	1.000000	-
Rv2445c	ndk	4	2.91	3.80	10.89	1.23	1.81	2.53	0.369986	1.000000	-
Rv2446c	-	7	106.47	102.58	91.03	126.08	130.62	111.36	0.780664	1.000000	-
Rv2447c	folC	13	0.00	0.38	0.48	0.00	0.00	0.00	0.412734	1.000000	-
Rv2448c	valS	28	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv2449c	-	26	232.45	235.45	226.03	224.86	211.93	231.38	0.991665	1.000000	-
Rv2450c	rpfE	8	157.52	153.06	158.41	124.03	129.60	151.77	0.944460	1.000000	-
Rv2451	-	8	76.27	105.15	85.52	110.29	116.77	97.19	0.719842	1.000000	-
Rv2452c	-	7	75.66	73.39	79.55	63.21	73.46	57.27	0.973751	1.000000	-
Rv2453c	mobA	5	301.47	336.14	308.37	293.43	307.39	281.89	0.993127	1.000000	-
Rv2454c	-	15	9.10	23.04	4.40	37.82	67.36	16.34	0.000000	0.000000	-
Rv2455c	-	37	11.73	16.99	6.35	39.31	60.13	13.95	0.000000	0.000000	-
Rv2456c	-	20	240.21	248.68	215.34	242.18	238.49	198.25	0.914348	1.000000	-
Rv2457c	clpX	19	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv2458	mmuM	17	420.62	438.75	423.74	399.63	396.05	413.47	0.986552	1.000000	-
Rv2459	-	21	173.43	186.06	181.49	153.36	169.98	200.63	0.783258	1.000000	-
Rv2460c	clpP2	10	0.00	1.04	0.00	1.84	1.18	1.09	0.499850	1.000000	-
Rv2461c	clpP	10	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv2462c	tig	19	203.62	191.19	188.04	223.54	221.27	208.50	0.990689	1.000000	-
Rv2463	lipP	20	111.48	110.50	120.03	96.94	110.60	121.01	0.906916	1.000000	-
Rv2464c	-	11	319.33	256.86	270.37	274.66	303.79	312.02	0.976123	1.000000	-
Rv2465c	-	7	0.00	0.71	0.00	0.00	0.00	0.00	0.309247	1.000000	-
Rv2466c	-	9	69.99	80.06	64.85	82.74	54.25	80.74	0.805885	1.000000	-
Rv2467	pepN	38	164.88	175.43	161.84	179.75	185.47	146.71	0.612009	1.000000	-
Rv2468c	-	5	196.44	162.03	234.18	174.51	185.13	199.83	0.858032	1.000000	-
Rv2469c	-	10	203.52	156.59	177.81	138.48	133.39	148.06	0.382569	1.000000	-
Rv2470	glbO	9	70.89	33.91	98.00	156.51	162.05	36.61	0.000000	0.000000	-
Rv2471	aglA	16	147.29	155.28	154.04	168.31	159.73	176.33	0.958925	1.000000	-
Rv2472	-	8	70.25	73.31	72.53	60.51	60.69	71.83	0.984563	1.000000	-
Rv2473	-	17	168.18	182.82	180.88	161.36	160.78	140.05	0.717959	1.000000	-
Rv2474c	-	13	69.10	75.33	79.89	90.65	70.98	65.03	0.835539	1.000000	-
Rv2475c	-	8	19.73	20.54	18.34	20.06	29.69	27.67	0.641210	1.000000	-
Rv2476c	gdh	64	18.29	43.07	13.86	42.35	59.01	32.68	0.000000	0.000000	-
Rv2477c	-	27	3.40	3.94	3.36	4.17	3.61	5.67	0.905734	1.000000	-
Rv2478c	-	6	326.78	290.08	281.07	277.51	257.04	293.19	0.992038	1.000000	-
Rv2479c	-	26	281.26	296.30	320.47	317.57	288.71	306.07	0.938562	1.000000	-
Rv2480c	-	4	199.33	231.85	243.28	247.75	224.08	177.49	0.894546	1.000000	-
Rv2481c	-	5	157.70	145.42	154.04	157.86	152.12	177.75	0.972897	1.000000	-
Rv2482c	plsB2	41	125.76	109.35	121.09	123.11	109.63	106.01	0.853517	1.000000	-
Rv2483c	plsC	27	40.25	50.86	54.33	34.51	57.75	49.79	0.109891	1.000000	-
Rv2484c	-	22	88.02	106.90	98.30	111.10	122.20	111.00	0.598895	1.000000	-
Rv2485c	lipQ	21	220.06	226.80	250.17	228.73	229.70	223.32	0.987704	1.000000	-
Rv2486	echA14	10	443.08	498.56	513.07	483.54	459.87	423.41	0.878817	1.000000	-
Rv2487c	PE_PGRS42	25	120.87	118.62	126.65	133.04	113.74	101.60	0.904146	1.000000	-
Rv2488c	-	46	227.51	196.67	213.34	215.35	193.36	202.17	0.876699	1.000000	-
Rv2489c	-	5	139.51	129.18	145.34	123.20	145.78	171.27	0.981130	1.000000	-
Rv2490c	PE_PGRS43	51	202.77	175.10	195.47	183.15	164.92	147.10	0.515579	1.000000	-
Rv2491	-	15	50.77	39.86	29.17	44.96	29.77	27.90	0.422799	1.000000	-
Rv2492	-	31	21.07	29.85	25.51	34.60	31.50	29.78	0.526996	1.000000	-
Rv2493	-	0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	TA sites <= 1
Rv2494	-	5	136.23	152.52	212.63	186.36	170.18	162.50	0.851083	1.000000	-
Rv2495c	pdhC	14	74.71	52.22	65.90	78.23	51.29	44.97	0.139963	1.000000	-
Rv2496c	pdhB	24	31.29	31.75	28.92	34.52	38.14	25.76	0.855980	1.000000	-
Rv2497c	pdhA	23	86.63	82.16	75.63	92.74	81.58	69.24	0.839487	1.000000	-
Rv2498c	citE	9	126.95	129.64	163.67	144.57	132.62	95.90	0.760537	1.000000	-
Rv2499c	-	6	52.51	49.41	71.40	64.75	66.90	76.79	0.920211	1.000000	-
Rv2500c	fadE19	28	71.65	56.16	52.82	57.13	66.34	70.18	0.705287	1.000000	-
Rv2501c	accA1	27	98.58	99.73	116.77	96.74	105.30	88.31	0.892674	1.000000	-
Rv2502c	accD1	29	109.71	97.99	111.76	112.48	108.03	83.50	0.722573	1.000000	-
Rv2503c	scoB	7	63.07	75.53	84.21	106.71	86.09	77.18	0.578330	1.000000	-
Rv2504c	scoA	13	55.18	49.43	54.18	57.22	57.50	57.68	0.999144	1.000000	-
Rv2505c	fadD35	36	124.61	122.93	119.26	119.02	130.04	113.80	0.985801	1.000000	-
Rv2506	-	9	350.53	276.02	352.07	255.72	187.57	237.37	0.351763	1.000000	-
Rv2507	-	19	4.92	23.00	4.62	27.55	45.02	10.52	0.000000	0.000002	-
Rv2508c	-	17	112.80	143.17	165.45	139.74	125.80	96.90	0.069630	0.814730	-
Rv2509	-	11	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv2510c	-	17	153.82	128.85	150.48	160.25	165.80	116.05	0.830527	1.000000	-
Rv2511	orn	8	12.98	26.61	11.32	29.44	37.46	25.32	0.001006	0.023759	-
Rv2512c	-	16	241.84	250.95	263.93	270.71	258.79	253.68	0.995454	1.000000	-
Rv2513	-	8	48.65	50.23	53.92	59.55	58.88	56.30	0.943400	1.000000	-
Rv2514c	-	7	60.31	62.75	55.47	67.54	65.72	71.85	0.989121	1.000000	-
Rv2515c	-	21	60.10	62.70	63.50	62.13	60.57	62.29	0.999871	1.000000	-
Rv2516c	-	13	18.23	23.17	20.21	19.25	22.84	15.59	0.989925	1.000000	-
Rv2517c	-	7	159.24	162.55	151.31	211.28	217.19	159.48	0.424790	1.000000	-
Rv2518c	lppS	21	37.28	47.61	35.06	42.66	59.03	40.54	0.268923	1.000000	-
Rv2519	PE26	35	96.09	88.87	83.78	91.32	90.82	92.06	0.988119	1.000000	-
Rv2520c	-	1	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	TA sites <= 1
Rv2521	bcp	10	86.98	83.89	80.34	70.89	74.07	86.60	0.990053	1.000000	-
Rv2522c	-	19	88.03	90.50	100.77	87.04	82.75	85.02	0.970827	1.000000	-
Rv2523c	acpS	4	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv2524c	fas	71	6.44	5.80	3.77	3.46	5.71	3.11	0.920837	1.000000	-
Rv2525c	-	13	189.07	221.11	215.09	205.92	189.59	199.04	0.941893	1.000000	-
Rv2526	-	1	103.14	41.00	78.00	74.20	32.45	72.35	1.000000	1.000000	TA sites <= 1
Rv2527	-	9	155.30	122.02	147.57	138.13	159.21	150.07	0.908162	1.000000	-
Rv2528c	mrr	10	92.48	114.87	120.03	92.74	138.26	144.69	0.522311	1.000000	-
Rv2529	-	16	104.74	81.31	102.47	82.08	89.54	85.79	0.736466	1.000000	-
Rv2530c	-	3	31.27	34.07	44.93	41.26	41.80	52.47	0.991675	1.000000	-
Rv2530A	-	5	49.32	69.83	83.73	74.30	95.13	102.76	0.316885	1.000000	-
Rv2531c	-	50	100.68	106.50	112.74	106.77	114.30	118.93	0.886143	1.000000	-
Rv2532c	-	6	202.75	180.74	203.58	170.00	164.92	150.72	0.847932	1.000000	-
Rv2533c	nusB	4	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv2534c	efp	11	0.70	0.00	0.00	0.00	0.00	0.49	0.338481	1.000000	-
Rv2535c	pepQ	19	114.20	143.10	92.30	169.90	150.06	137.66	0.055641	0.689467	-
Rv2536	-	9	95.33	122.80	119.09	159.72	131.32	163.73	0.560532	1.000000	-
Rv2537c	aroD	7	10.79	11.66	10.74	8.47	13.66	8.79	0.995755	1.000000	-
Rv2538c	aroB	10	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv2539c	aroK	5	0.00	0.00	0.00	0.00	0.00	5.27	0.014454	0.243331	-
Rv2540c	aroF	10	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv2541	-	3	155.78	103.06	176.99	184.68	188.77	134.72	0.305132	1.000000	-
Rv2542	-	13	166.67	195.54	215.89	173.81	174.29	170.11	0.874206	1.000000	-
Rv2543	lppA	14	149.40	139.78	140.50	125.00	130.42	137.94	0.995180	1.000000	-
Rv2544	lppB	15	35.75	28.45	33.15	27.79	29.84	23.49	0.993576	1.000000	-
Rv2545	-	10	229.90	206.40	252.71	193.09	250.94	229.67	0.636208	1.000000	-
Rv2546	-	9	249.25	327.75	245.56	256.19	249.74	259.44	0.848580	1.000000	-
Rv2547	-	2	214.98	237.62	223.64	268.72	262.53	282.99	0.626013	1.000000	-
Rv2548	-	5	120.67	123.01	154.14	106.66	121.44	89.53	0.897173	1.000000	-
Rv2549c	-	5	221.66	234.11	208.50	203.46	209.69	239.50	0.988691	1.000000	-
Rv2550c	-	7	50.92	56.91	52.68	59.72	52.98	58.92	0.999685	1.000000	-
Rv2551c	-	2	257.98	373.95	339.21	292.51	290.58	174.81	0.960550	1.000000	-
Rv2552c	aroE	5	1.51	2.08	0.00	17.21	0.00	0.00	0.124299	1.000000	-
Rv2553c	-	18	62.94	102.73	63.88	64.21	106.71	67.06	0.000229	0.006358	-
Rv2554c	-	4	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv2555c	alaS	42	0.00	0.00	0.00	0.11	0.00	0.00	0.599892	1.000000	-
Rv2556c	-	5	92.74	136.40	105.07	97.80	137.59	67.89	0.701638	1.000000	-
Rv2557	-	12	163.96	159.52	151.67	146.93	144.67	131.05	0.905709	1.000000	-
Rv2558	-	7	330.60	353.34	365.20	350.43	329.84	364.61	0.996475	1.000000	-
Rv2559c	-	16	182.51	168.24	159.20	182.84	177.56	175.32	0.991492	1.000000	-
Rv2560	-	24	115.95	129.84	118.20	105.30	93.61	119.92	0.678145	1.000000	-
Rv2561	-	3	232.37	384.80	302.02	298.93	250.77	321.85	0.665847	1.000000	-
Rv2562	-	8	179.64	159.57	150.62	186.79	191.50	186.64	0.933423	1.000000	-
Rv2563	-	9	152.69	135.53	160.38	153.26	163.15	192.11	0.805520	1.000000	-
Rv2564	glnQ	14	149.69	138.99	158.51	147.16	148.53	139.57	0.998732	1.000000	-
Rv2565	-	26	97.48	77.14	93.49	78.30	77.46	86.81	0.681347	1.000000	-
Rv2566	-	52	206.10	187.13	205.02	198.97	188.77	179.56	0.921583	1.000000	-
Rv2567	-	39	81.74	81.40	89.48	82.99	80.94	70.80	0.889789	1.000000	-
Rv2568c	-	17	33.49	28.96	25.24	28.82	32.54	31.73	0.950543	1.000000	-
Rv2569c	-	23	37.79	54.85	51.59	43.46	54.45	49.23	0.573342	1.000000	-
Rv2570	-	4	84.83	106.41	61.80	105.93	75.51	93.83	0.637552	1.000000	-
Rv2571c	-	9	224.42	225.90	198.78	243.12	235.48	199.36	0.955168	1.000000	-
Rv2572c	aspS	23	0.24	0.00	0.00	0.00	0.00	0.00	0.601194	1.000000	-
Rv2573	-	4	343.60	265.96	300.03	258.76	365.53	204.02	0.659326	1.000000	-
Rv2574	-	8	189.63	222.90	160.35	162.95	190.28	148.73	0.862828	1.000000	-
Rv2575	-	18	94.66	95.53	99.64	84.43	95.00	76.66	0.966404	1.000000	-
Rv2576c	-	11	168.04	160.35	133.57	161.57	169.02	145.81	0.986748	1.000000	-
Rv2577	-	40	87.85	97.22	93.51	91.25	92.40	85.00	0.958242	1.000000	-
Rv2578c	-	18	140.67	137.45	129.35	113.31	134.35	127.70	0.766640	1.000000	-
Rv2579	dhaA	15	168.91	181.10	168.75	171.27	143.50	155.39	0.992508	1.000000	-
Rv2580c	hisS	18	0.21	0.00	0.00	0.00	0.00	0.00	0.601999	1.000000	-
Rv2581c	-	7	21.29	20.32	24.98	32.55	43.29	25.42	0.874962	1.000000	-
Rv2582	ppiB	18	5.21	6.23	2.77	6.46	10.59	4.12	0.449132	1.000000	-
Rv2583c	relA	36	23.83	43.84	22.01	21.39	18.69	35.50	0.001122	0.026171	-
Rv2584c	apt	12	159.95	168.44	179.21	170.12	161.23	170.18	0.998554	1.000000	-
Rv2585c	-	27	171.91	156.29	156.24	182.46	178.94	159.69	0.920771	1.000000	-
Rv2586c	secF	18	47.97	68.13	53.01	100.99	95.89	58.29	0.065592	0.783573	-
Rv2587c	secD	24	27.14	37.20	21.74	53.18	64.75	34.53	0.000001	0.000027	-
Rv2588c	yajC	2	94.35	168.85	107.82	104.00	124.60	199.58	0.398277	1.000000	-
Rv2589	gabT	22	226.45	212.78	213.88	222.34	209.13	227.36	0.997960	1.000000	-
Rv2590	fadD9	62	173.48	193.00	182.71	203.96	196.80	206.24	0.419834	1.000000	-
Rv2591	PE_PGRS44	13	203.75	204.78	217.84	189.45	242.96	222.12	0.919233	1.000000	-
Rv2592c	ruvB	8	47.32	64.10	58.00	56.85	73.31	53.83	0.964293	1.000000	-
Rv2593c	ruvA	6	70.24	67.84	67.19	50.88	68.70	99.74	0.779225	1.000000	-
Rv2594c	ruvC	6	47.91	54.34	43.67	43.33	49.58	57.72	0.973646	1.000000	-
Rv2595	-	0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	TA sites <= 1
Rv2596	-	8	246.63	260.23	217.47	241.28	249.68	271.62	0.960478	1.000000	-
Rv2597	-	7	357.04	311.29	368.65	297.64	316.17	310.52	0.767735	1.000000	-
Rv2598	-	5	220.96	153.44	175.84	139.69	209.50	184.50	0.812802	1.000000	-
Rv2599	-	12	154.99	133.46	140.88	146.60	183.33	138.50	0.964387	1.000000	-
Rv2600	-	10	171.10	141.30	169.05	139.26	148.88	150.45	0.969204	1.000000	-
Rv2601	speE	25	252.32	218.04	241.00	218.17	227.19	222.01	0.735596	1.000000	-
Rv2601A	-	2	13.12	2.60	6.30	18.90	0.00	5.05	0.078240	0.894494	-
Rv2602	-	7	266.90	275.85	259.96	285.28	282.32	308.79	0.985978	1.000000	-
Rv2603c	-	7	20.92	18.90	12.04	19.86	17.41	25.17	0.423708	1.000000	-
Rv2604c	-	4	65.55	57.39	81.12	69.99	66.11	55.46	0.944889	1.000000	-
Rv2605c	tesB2	9	137.27	126.85	125.41	78.90	100.88	129.12	0.183632	1.000000	-
Rv2606c	-	12	105.05	108.03	149.90	83.16	103.45	108.83	0.321912	1.000000	-
Rv2607	pdxH	13	128.31	123.88	140.32	146.59	137.55	139.58	0.989787	1.000000	-
Rv2608	PPE42	32	92.66	104.69	95.83	100.51	99.00	106.77	0.975561	1.000000	-
Rv2609c	-	13	66.98	94.28	111.86	87.58	118.20	86.26	0.793388	1.000000	-
Rv2610c	pimA	16	0.00	0.00	0.00	0.00	0.00	0.34	0.307532	1.000000	-
Rv2611c	-	15	2.27	7.45	8.98	6.66	6.74	0.67	0.417435	1.000000	-
Rv2612c	pgsA1	3	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv2613c	-	9	26.20	36.21	26.69	33.91	34.68	25.00	0.871593	1.000000	-
Rv2614c	thrS	28	0.27	0.55	0.22	0.68	0.90	0.34	0.845190	1.000000	-
Rv2614A	-	6	51.34	55.02	37.67	44.53	38.50	40.39	0.969068	1.000000	-
Rv2615c	PE_PGRS45	17	264.37	269.73	270.84	229.82	217.14	221.85	0.979573	1.000000	-
Rv2616	-	5	234.12	247.16	237.85	226.68	202.78	208.84	0.996096	1.000000	-
Rv2617c	-	9	396.20	332.86	346.81	351.59	337.74	328.76	0.928879	1.000000	-
Rv2618	-	11	187.30	149.12	191.90	150.10	158.02	164.32	0.777967	1.000000	-
Rv2619c	-	2	212.59	156.62	162.57	166.70	156.00	109.68	0.827096	1.000000	-
Rv2620c	-	6	112.46	128.16	84.88	113.23	133.28	163.43	0.178222	1.000000	-
Rv2621c	-	5	51.43	74.70	66.19	68.79	46.95	72.66	0.839196	1.000000	-
Rv2622	-	8	131.18	129.61	115.77	135.22	116.85	141.40	0.988247	1.000000	-
Rv2623	TB31.7	8	58.12	58.90	75.05	61.69	62.36	65.35	0.987320	1.000000	-
Rv2624c	-	11	61.72	77.78	63.97	61.07	53.38	50.26	0.820204	1.000000	-
Rv2625c	-	19	122.54	87.84	107.97	97.04	110.47	78.64	0.641226	1.000000	-
Rv2626c	-	6	66.18	74.35	68.51	44.40	41.18	48.18	0.905953	1.000000	-
Rv2627c	-	21	55.23	40.20	50.30	34.40	38.75	41.41	0.210595	1.000000	-
Rv2628	-	8	129.30	76.64	112.75	106.30	110.69	69.80	0.738699	1.000000	-
Rv2629	-	24	102.87	84.65	108.76	110.39	94.18	90.44	0.924924	1.000000	-
Rv2630	-	10	69.62	68.99	81.26	103.64	104.58	78.19	0.465172	1.000000	-
Rv2631	-	22	105.70	121.76	110.59	127.04	103.70	114.86	0.965728	1.000000	-
Rv2632c	-	3	58.34	68.00	31.35	58.79	64.08	66.35	0.927095	1.000000	-
Rv2633c	-	13	111.19	126.90	101.02	122.51	91.67	144.33	0.411092	1.000000	-
Rv2634c	PE_PGRS46	33	147.71	145.73	140.77	154.84	144.38	139.52	0.997829	1.000000	-
Rv2635	-	7	83.55	94.06	57.00	82.03	76.63	76.36	0.750885	1.000000	-
Rv2636	-	18	140.13	155.56	148.21	148.25	138.16	142.31	0.977499	1.000000	-
Rv2637	dedA	10	149.13	135.83	121.88	184.32	146.79	135.03	0.718166	1.000000	-
Rv2638	-	5	111.43	126.02	87.51	102.56	90.96	87.55	0.929664	1.000000	-
Rv2639c	-	7	224.76	189.88	174.60	208.15	227.13	180.25	0.985291	1.000000	-
Rv2640c	-	5	232.13	222.60	160.81	110.96	109.19	204.04	0.046607	0.594121	-
Rv2641	cadI	7	61.32	76.38	57.36	64.95	61.34	64.05	0.988790	1.000000	-
Rv2642	-	4	209.13	200.30	196.11	174.35	190.10	198.40	0.986402	1.000000	-
Rv2643	arsC	30	144.12	146.92	128.31	154.03	144.04	150.81	0.844470	1.000000	-
Rv2644c	-	6	52.05	55.95	54.87	83.81	71.14	84.48	0.290614	1.000000	-
Rv2645	-	4	102.52	73.04	57.79	77.29	92.44	76.44	0.508604	1.000000	-
Rv2646	-	19	212.34	202.06	183.96	196.63	182.65	183.27	0.960241	1.000000	-
Rv2647	-	6	32.36	42.51	35.95	41.08	43.01	32.08	0.971065	1.000000	-
Rv2648	-	4	185.00	228.22	206.61	239.79	235.60	156.04	0.772665	1.000000	-
Rv2649	-	25	291.52	299.69	328.48	317.24	299.32	317.23	0.968393	1.000000	-
Rv2650c	-	9	38.33	11.38	20.53	30.94	13.02	23.40	0.037506	0.503869	-
Rv2651c	-	7	15.29	22.41	29.98	14.73	16.51	13.12	0.635983	1.000000	-
Rv2652c	-	7	40.93	42.13	17.05	21.05	21.80	38.90	0.504386	1.000000	-
Rv2653c	-	4	24.81	44.52	76.00	33.75	57.70	45.94	0.427684	1.000000	-
Rv2654c	-	0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	TA sites <= 1
Rv2655c	-	22	138.65	148.56	165.34	149.64	143.24	158.24	0.928518	1.000000	-
Rv2656c	-	5	119.39	176.87	165.84	217.35	162.44	156.81	0.664357	1.000000	-
Rv2657c	-	5	80.75	131.21	83.73	95.27	107.74	104.62	0.447604	1.000000	-
Rv2658c	-	12	175.82	175.68	181.21	203.87	179.17	191.74	0.963259	1.000000	-
Rv2659c	-	21	145.48	164.77	125.13	166.62	143.60	175.96	0.576995	1.000000	-
Rv2660c	-	4	118.83	110.81	86.90	133.64	129.30	143.68	0.981455	1.000000	-
Rv2661c	-	2	177.42	196.27	158.30	185.70	177.33	186.18	0.949317	1.000000	-
Rv2662	-	4	116.20	113.31	108.53	94.87	118.50	89.55	0.989037	1.000000	-
Rv2663	-	10	150.39	145.97	127.89	177.63	136.48	155.42	0.567423	1.000000	-
Rv2664	-	0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	TA sites <= 1
Rv2665	-	6	104.28	86.61	100.45	92.33	103.48	107.42	0.992831	1.000000	-
Rv2666	-	11	276.92	256.36	283.85	268.09	233.78	272.67	0.985759	1.000000	-
Rv2667	clpC2	6	121.82	178.38	109.24	126.42	149.55	158.26	0.736762	1.000000	-
Rv2668	-	9	125.48	152.01	164.63	241.63	240.02	158.86	0.005591	0.109895	-
Rv2669	-	8	62.43	51.58	58.06	61.72	53.45	44.10	0.930747	1.000000	-
Rv2670c	-	18	91.79	98.06	91.75	82.77	93.88	86.63	0.983937	1.000000	-
Rv2671	ribD	13	102.62	126.52	101.67	128.48	110.77	156.69	0.508116	1.000000	-
Rv2672	-	19	188.25	157.29	162.40	205.74	202.48	165.74	0.763751	1.000000	-
Rv2673	-	29	4.88	7.36	10.14	14.67	11.97	13.27	0.901891	1.000000	-
Rv2674	-	8	240.49	243.20	255.76	227.76	282.67	228.13	0.947286	1.000000	-
Rv2675c	-	14	251.03	223.04	235.10	231.29	240.99	261.34	0.992421	1.000000	-
Rv2676c	-	13	1.47	0.77	1.68	225.81	243.14	23.84	0.000000	0.000000	-
Rv2677c	hemY	16	31.40	25.26	30.78	228.45	185.37	45.15	0.000000	0.000000	-
Rv2678c	hemE	17	4.08	2.43	2.19	109.50	115.46	3.58	0.000000	0.000000	-
Rv2679	echA15	6	185.39	197.02	193.84	159.56	164.22	211.04	0.830283	1.000000	-
Rv2680	-	10	89.10	103.59	78.96	80.06	82.73	84.38	0.767369	1.000000	-
Rv2681	-	19	135.61	132.36	147.81	130.18	135.16	141.56	0.996213	1.000000	-
Rv2682c	dxs1	24	0.00	0.00	0.00	0.00	1.39	0.00	0.165371	1.000000	-
Rv2683	-	11	236.10	190.65	226.98	163.71	165.67	167.13	0.091009	0.996064	-
Rv2684	arsA	20	208.92	131.02	206.17	91.12	111.54	121.18	0.000000	0.000000	-
Rv2685	arsB1	14	154.59	133.73	135.30	116.72	151.40	119.37	0.366401	1.000000	-
Rv2686c	-	14	106.17	87.66	101.91	97.29	112.38	77.02	0.716868	1.000000	-
Rv2687c	-	12	96.00	103.54	89.66	87.91	86.55	92.70	0.992117	1.000000	-
Rv2688c	-	11	101.60	89.75	95.57	90.91	93.18	115.39	0.909314	1.000000	-
Rv2689c	-	22	277.39	216.83	278.24	279.52	260.35	234.44	0.801338	1.000000	-
Rv2690c	-	32	21.12	24.14	16.22	24.16	33.35	23.01	0.006934	0.133651	-
Rv2691	ceoB	14	90.77	136.79	122.51	107.67	112.14	134.22	0.532532	1.000000	-
Rv2692	ceoC	3	65.64	127.05	126.18	87.65	89.38	108.92	0.310277	1.000000	-
Rv2693c	-	12	260.34	240.24	270.88	201.91	246.25	264.62	0.914232	1.000000	-
Rv2694c	-	8	184.35	233.11	165.30	171.47	195.15	211.83	0.752394	1.000000	-
Rv2695	-	10	299.33	311.73	308.40	332.20	317.06	304.94	0.997522	1.000000	-
Rv2696c	-	10	196.77	214.98	148.25	173.90	201.51	192.55	0.909521	1.000000	-
Rv2697c	dut	5	3.73	2.04	15.60	0.00	0.00	2.17	0.000004	0.000145	-
Rv2698	-	12	4.71	10.91	5.45	1.17	2.33	6.35	0.004326	0.087182	-
Rv2699c	-	4	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv2700	-	8	26.46	61.47	55.76	66.14	89.84	47.13	0.081757	0.916326	-
Rv2701c	suhB	11	297.21	199.10	229.54	224.97	196.34	213.35	0.709155	1.000000	-
Rv2702	ppgK	14	15.79	25.36	25.48	44.27	58.09	27.70	0.050571	0.635771	-
Rv2703	sigA	21	0.18	0.00	0.00	0.00	0.00	0.00	0.601470	1.000000	-
Rv2704	-	11	462.03	367.74	378.66	408.90	380.11	314.15	0.877086	1.000000	-
Rv2705c	-	10	240.06	213.04	186.48	220.00	228.81	235.60	0.986198	1.000000	-
Rv2706c	-	2	212.01	183.45	194.97	186.86	152.98	241.03	0.971108	1.000000	-
Rv2707	-	28	200.18	188.57	211.17	130.08	147.07	178.38	0.021502	0.331254	-
Rv2708c	-	7	135.73	129.41	117.08	145.73	159.17	172.73	0.909864	1.000000	-
Rv2709	-	11	185.31	177.33	164.04	178.31	164.87	181.64	0.998400	1.000000	-
Rv2710	sigB	13	140.05	134.23	142.80	68.70	74.61	127.22	0.000343	0.009245	-
Rv2711	ideR	7	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv2712c	-	15	275.58	256.49	243.79	279.44	220.74	200.25	0.891720	1.000000	-
Rv2713	sthA	23	110.95	109.55	115.19	111.21	106.02	121.13	0.987784	1.000000	-
Rv2714	-	16	101.74	106.37	97.85	87.92	94.69	115.00	0.957939	1.000000	-
Rv2715	-	19	63.64	69.69	76.88	68.21	71.99	76.41	0.944207	1.000000	-
Rv2716	-	10	130.33	119.01	132.06	136.37	136.83	136.94	0.998752	1.000000	-
Rv2717c	-	10	89.94	94.59	82.52	86.40	91.15	93.44	0.998246	1.000000	-
Rv2718c	-	8	234.55	218.35	237.97	218.55	239.92	237.13	0.998927	1.000000	-
Rv2719c	-	5	191.47	148.71	173.76	130.02	144.52	105.36	0.810843	1.000000	-
Rv2720	lexA	8	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv2721c	-	29	85.67	87.36	83.63	90.72	86.11	111.02	0.630869	1.000000	-
Rv2722	-	7	8.34	11.71	11.14	10.59	11.09	13.69	0.942270	1.000000	-
Rv2723	-	27	83.13	89.29	100.10	110.55	100.93	102.84	0.724719	1.000000	-
Rv2724c	fadE20	25	131.75	125.56	136.27	125.53	133.00	148.36	0.840117	1.000000	-
Rv2725c	hflX	21	225.48	210.59	224.22	209.46	197.85	214.08	0.975562	1.000000	-
Rv2726c	dapF	11	0.00	0.00	0.00	0.00	0.66	0.85	0.411940	1.000000	-
Rv2727c	miaA	15	62.00	69.70	62.43	37.80	36.14	62.82	0.888099	1.000000	-
Rv2728c	-	11	136.60	144.61	168.43	154.99	148.14	155.94	0.978085	1.000000	-
Rv2729c	-	12	244.01	292.94	265.74	258.24	260.74	293.27	0.942456	1.000000	-
Rv2730	-	12	176.69	207.58	203.19	205.69	184.16	221.65	0.884987	1.000000	-
Rv2731	-	8	133.49	94.65	138.50	130.80	117.86	143.29	0.786179	1.000000	-
Rv2732c	-	6	156.43	183.76	155.43	145.55	168.84	188.34	0.982723	1.000000	-
Rv2733c	-	16	261.28	248.92	194.40	189.97	176.34	220.38	0.259056	1.000000	-
Rv2734	-	22	41.44	40.56	34.12	42.47	57.35	37.58	0.454472	1.000000	-
Rv2735c	-	31	97.13	105.35	110.70	105.95	109.72	109.63	0.969324	1.000000	-
Rv2736c	recX	6	96.94	80.71	103.30	136.01	98.59	73.45	0.292309	1.000000	-
Rv2737c	recA	29	189.85	214.65	196.72	196.44	191.82	201.49	0.977549	1.000000	-
Rv2737A	-	3	26.61	35.65	39.78	51.71	67.43	52.47	0.326530	1.000000	-
Rv2738c	-	4	172.49	163.57	197.41	204.79	242.70	159.42	0.953261	1.000000	-
Rv2739c	-	5	79.04	77.24	106.08	72.42	81.56	104.80	0.938985	1.000000	-
Rv2740	-	5	260.35	236.32	260.58	272.31	229.54	314.78	0.902777	1.000000	-
Rv2741	PE_PGRS47	24	211.24	187.95	220.94	204.35	200.74	189.77	0.984103	1.000000	-
Rv2742c	-	15	255.57	238.10	223.96	230.38	230.31	202.75	0.816424	1.000000	-
Rv2743c	-	12	288.66	267.89	222.64	278.63	277.79	219.48	0.856465	1.000000	-
Rv2744c	35kd_ag	9	151.34	164.92	164.33	168.50	222.49	186.75	0.713082	1.000000	-
Rv2745c	-	2	341.53	280.67	325.99	411.08	397.40	392.87	0.965566	1.000000	-
Rv2746c	pgsA3	14	2.70	3.29	1.35	3.02	5.35	2.22	0.888094	1.000000	-
Rv2747	-	7	20.66	36.33	15.16	57.47	48.96	36.18	0.010957	0.196055	-
Rv2748c	ftsK	30	16.86	20.00	15.62	17.36	14.29	16.61	0.995139	1.000000	-
Rv2749	-	3	234.04	182.13	241.81	210.61	220.07	180.34	0.979242	1.000000	-
Rv2750	-	12	51.26	40.26	59.69	53.20	55.50	62.75	0.872010	1.000000	-
Rv2751	-	23	49.19	42.37	53.99	54.79	46.81	45.38	0.784161	1.000000	-
Rv2752c	-	19	73.58	47.44	61.70	57.69	49.65	60.09	0.619779	1.000000	-
Rv2753c	dapA	10	0.00	0.00	0.00	0.00	0.00	0.54	0.308328	1.000000	-
Rv2754c	thyX	9	44.44	39.72	65.95	103.41	128.91	43.99	0.000000	0.000000	-
Rv2755c	hsdS.1	7	9.64	11.66	8.93	9.18	11.74	14.14	0.819198	1.000000	-
Rv2756c	hsdM	37	87.00	71.77	81.67	69.06	55.74	70.61	0.205586	1.000000	-
Rv2757c	-	8	64.23	67.68	97.84	39.54	36.66	42.11	0.025440	0.373182	-
Rv2758c	-	6	28.86	44.20	31.84	49.08	36.54	25.31	0.335542	1.000000	-
Rv2759c	-	9	159.71	131.24	121.57	121.32	141.76	157.95	0.891981	1.000000	-
Rv2760c	-	2	309.43	273.87	263.77	320.96	380.28	314.69	0.721863	1.000000	-
Rv2761c	hsdS	25	90.22	82.99	105.93	106.88	95.20	98.99	0.871991	1.000000	-
Rv2762c	-	5	139.93	122.47	123.62	140.35	111.03	142.90	0.966790	1.000000	-
Rv2763c	dfrA	9	0.00	1.11	0.00	0.00	0.00	0.00	0.308565	1.000000	-
Rv2764c	thyA	22	1.43	2.77	0.00	0.00	0.00	1.59	0.000165	0.004709	-
Rv2765	-	14	95.68	95.37	77.67	86.19	86.11	110.17	0.815736	1.000000	-
Rv2766c	fabG	6	306.54	324.75	276.50	355.36	349.19	274.04	0.903197	1.000000	-
Rv2767c	-	10	28.84	27.41	39.00	36.73	34.27	36.65	0.934918	1.000000	-
Rv2768c	PPE43	18	52.29	55.15	49.68	59.90	52.24	68.33	0.923348	1.000000	-
Rv2769c	PE27	17	122.96	126.17	128.77	118.66	129.00	132.04	0.998700	1.000000	-
Rv2770c	PPE44	16	239.82	225.08	245.15	246.57	236.43	224.13	0.997838	1.000000	-
Rv2771c	-	9	186.80	169.65	196.07	188.41	184.19	206.79	0.993106	1.000000	-
Rv2772c	-	11	198.28	239.90	194.30	221.60	231.61	179.99	0.744061	1.000000	-
Rv2773c	dapB	12	11.70	21.13	9.13	19.98	16.31	17.68	0.324862	1.000000	-
Rv2774c	-	3	98.13	86.87	82.18	73.27	66.77	84.10	0.980698	1.000000	-
Rv2775	-	12	43.94	49.46	39.29	47.64	46.80	57.71	0.954432	1.000000	-
Rv2776c	-	15	96.38	97.78	80.05	87.49	102.67	94.15	0.932410	1.000000	-
Rv2777c	-	21	119.34	114.62	107.41	119.06	121.64	139.10	0.722157	1.000000	-
Rv2778c	-	9	120.08	162.06	109.93	158.84	127.31	167.64	0.339976	1.000000	-
Rv2779c	-	8	46.11	52.86	57.77	53.13	49.18	49.98	0.998611	1.000000	-
Rv2780	ald	25	92.18	93.75	96.08	85.59	76.08	103.16	0.736260	1.000000	-
Rv2781c	-	19	155.99	172.39	221.59	188.85	171.38	213.56	0.584705	1.000000	-
Rv2782c	pepR	13	123.94	119.01	107.99	103.20	110.74	116.35	0.983248	1.000000	-
Rv2783c	gpsI	19	0.00	0.00	0.00	0.00	2.00	0.00	0.091843	1.000000	-
Rv2784c	lppU	6	73.94	90.24	90.70	81.62	82.12	101.75	0.988751	1.000000	-
Rv2785c	rpsO	4	48.09	21.69	13.34	31.81	21.90	25.33	0.677507	1.000000	-
Rv2786c	ribF	14	10.19	8.06	8.73	16.56	9.73	11.48	0.932154	1.000000	-
Rv2787	-	27	119.87	125.46	123.67	125.59	130.93	136.65	0.984140	1.000000	-
Rv2788	sirR	7	79.08	101.35	89.55	120.58	72.89	99.38	0.199283	1.000000	-
Rv2789c	fadE21	16	34.63	39.17	36.09	26.06	36.20	34.33	0.823982	1.000000	-
Rv2790c	ltp1	23	72.20	68.82	85.92	79.45	78.24	76.34	0.951654	1.000000	-
Rv2791c	-	17	95.10	83.75	128.25	99.51	101.19	83.66	0.743885	1.000000	-
Rv2792c	-	7	134.63	111.77	128.06	121.38	155.89	136.23	0.920967	1.000000	-
Rv2793c	truB	10	81.32	74.33	107.17	91.78	48.97	69.08	0.835976	1.000000	-
Rv2794c	-	9	0.43	0.00	0.00	0.00	0.00	0.00	0.605764	1.000000	-
Rv2795c	-	16	33.26	27.65	32.18	31.78	36.98	37.60	0.953689	1.000000	-
Rv2796c	lppV	5	51.69	30.54	56.65	50.62	53.45	42.39	0.687944	1.000000	-
Rv2797c	-	23	287.77	261.19	251.34	257.37	247.34	248.84	0.959757	1.000000	-
Rv2798c	-	3	167.17	193.60	243.91	208.55	143.38	183.32	0.867937	1.000000	-
Rv2799	-	13	184.11	261.09	196.83	380.98	370.87	235.36	0.000832	0.020504	-
Rv2800	-	20	173.45	214.56	215.82	198.25	171.35	191.37	0.654056	1.000000	-
Rv2801c	-	5	174.22	194.63	215.53	190.00	190.92	213.22	0.915621	1.000000	-
Rv2802c	-	8	289.60	357.30	238.93	286.37	264.60	297.89	0.687457	1.000000	-
Rv2803	-	7	400.74	340.80	394.69	328.51	339.85	392.86	0.601945	1.000000	-
Rv2804c	-	7	130.45	146.98	170.25	188.97	149.65	148.68	0.802628	1.000000	-
Rv2805	-	3	162.25	205.08	221.18	236.84	218.37	236.44	0.822624	1.000000	-
Rv2806	-	7	266.45	187.20	191.03	190.39	197.42	215.57	0.859408	1.000000	-
Rv2807	-	11	85.98	93.28	90.81	94.48	91.20	90.99	0.999324	1.000000	-
Rv2808	-	9	59.17	58.22	50.73	59.32	49.53	62.00	0.936058	1.000000	-
Rv2809	-	8	64.44	70.29	65.24	50.77	54.38	93.46	0.504775	1.000000	-
Rv2810c	-	12	123.81	123.58	127.02	141.41	131.08	123.52	0.992207	1.000000	-
Rv2811	-	3	105.27	83.47	57.15	53.36	61.30	48.37	0.347705	1.000000	-
Rv2812	-	19	73.01	77.54	89.46	61.49	40.64	52.51	0.190184	1.000000	-
Rv2813	-	11	39.72	42.25	56.58	59.83	58.13	55.82	0.681735	1.000000	-
Rv2814c	-	25	289.57	299.31	326.38	323.74	301.17	303.78	0.958618	1.000000	-
Rv2815c	-	4	200.98	246.96	230.38	235.41	205.94	169.34	0.849766	1.000000	-
Rv2816c	-	14	18.45	17.82	19.12	12.96	13.91	15.00	0.851058	1.000000	-
Rv2817c	-	21	24.49	24.93	24.44	23.93	24.32	23.34	0.999929	1.000000	-
Rv2818c	-	27	75.75	77.15	86.96	89.29	62.97	50.36	0.014621	0.244095	-
Rv2819c	-	23	43.57	39.57	43.54	34.82	39.22	53.25	0.484134	1.000000	-
Rv2820c	-	19	94.45	77.53	69.06	85.04	78.37	87.28	0.809717	1.000000	-
Rv2821c	-	13	77.64	86.14	79.49	89.97	81.50	95.92	0.975844	1.000000	-
Rv2822c	-	13	59.03	64.66	61.62	56.49	66.02	82.04	0.619839	1.000000	-
Rv2823c	-	48	80.03	80.70	83.42	77.82	66.30	78.13	0.835923	1.000000	-
Rv2824c	-	18	125.66	128.48	121.45	148.85	142.58	149.00	0.601587	1.000000	-
Rv2825c	-	5	103.28	87.13	106.89	129.80	96.36	93.57	0.923263	1.000000	-
Rv2826c	-	11	110.25	120.61	108.90	119.49	114.76	119.19	0.998464	1.000000	-
Rv2827c	-	14	5.47	6.93	4.01	5.68	7.60	11.34	0.746883	1.000000	-
Rv2828c	-	5	104.51	83.66	111.96	126.57	121.24	99.94	0.930040	1.000000	-
Rv2829c	-	4	67.26	117.67	85.87	118.89	80.94	112.34	0.651371	1.000000	-
Rv2830c	-	1	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	TA sites <= 1
Rv2831	echA16	6	132.26	95.35	110.39	83.62	83.43	74.25	0.382716	1.000000	-
Rv2832c	ugpC	10	64.08	52.39	61.25	51.26	56.06	64.60	0.934344	1.000000	-
Rv2833c	ugpB	19	40.04	33.17	42.81	37.07	31.22	37.14	0.930089	1.000000	-
Rv2834c	ugpE	9	69.39	55.73	51.04	42.31	69.75	57.27	0.465431	1.000000	-
Rv2835c	ugpA	16	89.31	71.81	79.42	68.21	60.74	83.88	0.578797	1.000000	-
Rv2836c	dinF	23	124.66	107.67	145.36	119.63	116.22	117.59	0.946846	1.000000	-
Rv2837c	-	13	18.44	39.90	19.23	23.69	34.50	24.50	0.183382	1.000000	-
Rv2838c	rbfA	8	51.27	67.56	41.46	58.28	59.89	35.77	0.266611	1.000000	-
Rv2839c	infB	30	2.83	2.36	2.60	4.81	2.95	4.56	0.960667	1.000000	-
Rv2840c	-	7	129.50	91.58	88.80	96.40	122.34	108.77	0.799390	1.000000	-
Rv2841c	nusA	14	5.87	3.66	2.66	13.21	7.03	6.38	0.748831	1.000000	-
Rv2842c	-	7	72.10	34.14	64.23	31.55	18.69	26.25	0.002010	0.045564	-
Rv2843	-	8	62.61	128.07	67.17	97.91	98.00	73.86	0.024016	0.360378	-
Rv2844	-	4	88.54	122.20	70.41	126.38	122.64	87.12	0.502867	1.000000	-
Rv2845c	proS	30	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv2846c	efpA	33	0.12	0.00	0.00	0.15	0.00	0.00	0.747850	1.000000	-
Rv2847c	cysG	18	42.60	56.72	48.81	62.21	54.73	39.29	0.497566	1.000000	-
Rv2848c	cobB	25	182.62	168.32	177.19	173.43	163.70	158.94	0.981569	1.000000	-
Rv2849c	cobO	6	123.69	101.27	86.60	87.38	88.83	82.68	0.846961	1.000000	-
Rv2850c	-	17	108.99	85.16	72.85	96.34	96.01	94.34	0.609625	1.000000	-
Rv2851c	-	9	141.94	107.15	114.74	126.19	129.30	118.97	0.974579	1.000000	-
Rv2852c	mqo	21	140.26	130.59	116.98	123.34	128.66	107.03	0.939445	1.000000	-
Rv2853	PE_PGRS48	35	158.95	183.65	169.30	168.95	179.03	169.70	0.943655	1.000000	-
Rv2854	-	18	84.51	93.82	94.34	82.05	86.01	93.97	0.983406	1.000000	-
Rv2855	mtr	30	41.09	35.40	39.54	35.90	38.11	29.48	0.812383	1.000000	-
Rv2856	nicT	15	73.55	57.42	68.74	50.53	60.76	76.34	0.618292	1.000000	-
Rv2857c	-	12	55.60	48.40	47.93	44.53	39.40	39.26	0.904229	1.000000	-
Rv2858c	aldC	14	52.85	50.85	74.30	63.52	68.93	49.84	0.620159	1.000000	-
Rv2859c	-	17	100.58	116.95	128.02	126.50	115.70	101.91	0.792348	1.000000	-
Rv2860c	glnA4	31	78.98	80.37	92.68	75.83	87.98	84.94	0.913735	1.000000	-
Rv2861c	mapB	15	14.77	20.68	11.89	31.97	40.96	20.13	0.076755	0.882569	-
Rv2862c	-	5	361.71	348.75	314.69	248.07	231.54	257.49	0.466070	1.000000	-
Rv2863	-	4	234.31	259.77	229.09	294.72	230.69	226.52	0.908521	1.000000	-
Rv2864c	-	24	125.71	149.37	160.50	162.63	151.90	167.20	0.860844	1.000000	-
Rv2865	-	3	145.52	171.31	128.28	159.41	132.37	161.31	0.971809	1.000000	-
Rv2866	-	5	599.36	561.81	493.15	530.29	453.99	450.31	0.831840	1.000000	-
Rv2867c	-	12	135.08	175.51	133.52	108.49	117.89	164.51	0.289389	1.000000	-
Rv2868c	ispG	14	32.94	23.70	23.59	5.63	2.64	27.97	0.342258	1.000000	-
Rv2869c	-	21	76.41	79.72	88.73	32.10	63.09	79.06	0.003328	0.069529	-
Rv2870c	dxr	16	35.97	42.31	33.62	45.11	36.94	41.06	0.996940	1.000000	-
Rv2871	-	7	27.71	23.28	29.08	24.00	24.84	28.74	0.999273	1.000000	-
Rv2872	-	11	191.79	190.60	160.67	168.77	166.69	177.75	0.992956	1.000000	-
Rv2873	mpt83	13	134.23	136.49	115.02	124.35	109.85	102.83	0.973411	1.000000	-
Rv2874	dipZ	46	58.13	49.07	50.38	52.13	62.99	60.06	0.473146	1.000000	-
Rv2875	mpt70	12	71.72	72.78	76.71	64.86	59.35	66.01	0.949640	1.000000	-
Rv2876	-	1	7.53	10.20	0.00	9.27	26.20	9.40	1.000000	1.000000	TA sites <= 1
Rv2877c	-	20	178.08	162.75	164.81	183.97	158.65	154.12	0.958067	1.000000	-
Rv2878c	mpt53	7	163.23	142.58	156.89	168.32	168.23	146.61	0.968654	1.000000	-
Rv2879c	-	11	324.27	312.55	294.23	288.92	259.30	298.43	0.939738	1.000000	-
Rv2880c	-	15	263.02	268.44	241.84	255.36	221.22	248.45	0.968046	1.000000	-
Rv2881c	cdsA	12	15.03	19.11	17.39	16.50	18.57	13.84	0.999436	1.000000	-
Rv2882c	frr	16	3.51	3.48	2.15	2.60	3.56	1.90	0.981239	1.000000	-
Rv2883c	pyrH	10	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv2884	-	15	190.56	200.92	181.06	210.46	190.71	180.54	0.990118	1.000000	-
Rv2885c	-	17	120.76	128.32	114.05	117.86	107.52	118.48	0.970016	1.000000	-
Rv2886c	-	21	113.79	109.12	91.79	116.24	116.24	114.78	0.858068	1.000000	-
Rv2887	-	8	97.14	99.34	88.68	94.46	90.26	90.93	0.999159	1.000000	-
Rv2888c	amiC	33	176.34	189.16	182.13	167.19	172.74	183.71	0.976231	1.000000	-
Rv2889c	tsf	10	0.00	0.50	0.00	0.00	0.00	0.47	0.415632	1.000000	-
Rv2890c	rpsB	9	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv2891	-	13	146.13	176.78	173.85	165.66	190.57	182.81	0.808651	1.000000	-
Rv2892c	PPE45	21	169.97	169.12	165.82	168.74	163.95	187.26	0.998660	1.000000	-
Rv2893	-	10	232.95	262.71	247.83	267.13	227.24	241.65	0.990330	1.000000	-
Rv2894c	xerC	12	96.81	111.85	114.13	137.20	114.88	129.03	0.767735	1.000000	-
Rv2895c	viuB	12	181.30	177.21	169.16	172.80	168.31	195.45	0.997338	1.000000	-
Rv2896c	-	20	198.52	175.78	195.72	201.85	204.32	190.63	0.984837	1.000000	-
Rv2897c	-	11	74.02	88.82	81.43	95.15	82.25	83.26	0.945998	1.000000	-
Rv2898c	-	4	23.43	20.56	45.15	24.40	26.85	29.68	0.422651	1.000000	-
Rv2899c	fdhD	13	73.32	73.56	109.45	72.87	71.88	86.53	0.641726	1.000000	-
Rv2900c	fdhF	33	139.19	116.91	131.03	128.91	126.70	130.98	0.980019	1.000000	-
Rv2901c	-	9	34.27	23.68	29.64	25.30	33.09	39.55	0.581184	1.000000	-
Rv2902c	rnhB	12	140.72	142.18	141.65	136.17	146.32	135.04	0.999588	1.000000	-
Rv2903c	lepB	12	0.32	0.00	0.00	0.00	0.38	0.00	0.614543	1.000000	-
Rv2904c	rplS	4	17.33	11.45	6.31	11.65	17.36	5.06	0.534846	1.000000	-
Rv2905	lppW	16	123.86	106.57	106.60	124.83	124.47	113.71	0.985559	1.000000	-
Rv2906c	trmD	10	0.39	0.50	0.00	0.00	0.73	0.00	0.643592	1.000000	-
Rv2907c	rimM	7	4.30	11.69	1.80	14.21	2.71	16.00	0.000592	0.015150	-
Rv2908c	-	6	23.12	23.01	17.68	33.65	22.85	15.85	0.722159	1.000000	-
Rv2909c	rpsP	7	4.79	6.54	6.72	10.86	15.23	12.15	0.883984	1.000000	-
Rv2910c	-	10	92.24	141.42	96.57	114.83	105.05	135.40	0.413810	1.000000	-
Rv2911	dacB2	10	143.16	121.81	129.48	136.82	146.50	121.93	0.996979	1.000000	-
Rv2912c	-	9	117.16	141.49	122.40	124.70	114.37	140.23	0.896170	1.000000	-
Rv2913c	-	30	71.03	76.77	80.86	74.97	84.61	84.45	0.896796	1.000000	-
Rv2914c	pknI	27	116.70	114.37	124.97	120.37	115.00	119.22	0.998589	1.000000	-
Rv2915c	-	13	181.97	161.50	186.22	218.26	140.84	148.70	0.400725	1.000000	-
Rv2916c	ffh	10	4.52	4.07	1.55	3.77	7.67	3.51	0.742278	1.000000	-
Rv2917	-	25	179.12	189.47	184.95	171.05	166.14	176.37	0.992731	1.000000	-
Rv2918c	glnD	26	107.43	95.36	113.01	102.56	102.71	92.77	0.946325	1.000000	-
Rv2919c	glnB	6	22.08	17.79	37.46	24.05	8.13	27.91	0.399444	1.000000	-
Rv2920c	amt	20	52.96	60.54	50.32	55.06	48.82	59.57	0.931189	1.000000	-
Rv2921c	ftsY	13	0.30	0.00	0.00	0.33	0.00	0.00	0.752905	1.000000	-
Rv2922c	smc	41	116.10	124.98	120.00	106.43	119.19	117.34	0.908904	1.000000	-
Rv2922A	acyP	1	50.87	0.00	37.85	56.40	0.00	71.65	1.000000	1.000000	TA sites <= 1
Rv2923c	-	5	133.08	134.16	182.36	162.64	155.25	157.66	0.808119	1.000000	-
Rv2924c	fpg	14	329.66	313.83	274.27	302.66	315.17	318.29	0.918353	1.000000	-
Rv2925c	rnc	11	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv2926c	-	6	61.27	57.95	62.51	63.57	68.76	58.85	0.999781	1.000000	-
Rv2927c	-	12	18.18	10.61	8.60	13.22	16.24	8.20	0.949979	1.000000	-
Rv2928	tesA	26	18.95	12.16	13.12	8.78	9.65	23.00	0.037282	0.502551	-
Rv2929	-	7	18.96	14.71	12.05	11.49	11.60	15.91	0.726475	1.000000	-
Rv2930	fadD26	40	274.78	150.05	220.78	108.74	91.38	190.30	0.036555	0.496107	-
Rv2931	ppsA	81	206.35	107.51	188.85	77.18	63.95	145.29	0.000000	0.000000	-
Rv2932	ppsB	71	189.91	104.89	178.93	60.77	54.24	127.83	0.000000	0.000000	-
Rv2933	ppsC	84	231.77	123.39	229.17	88.19	73.69	160.60	0.000000	0.000000	-
Rv2934	ppsD	67	316.56	165.17	267.19	114.01	97.63	202.91	0.000000	0.000000	-
Rv2935	ppsE	68	425.29	231.27	374.90	157.22	128.94	260.58	0.000000	0.000000	-
Rv2936	drrA	19	283.91	283.26	232.42	244.22	266.26	318.11	0.668382	1.000000	-
Rv2937	drrB	23	118.77	113.38	113.22	99.45	101.69	128.74	0.938924	1.000000	-
Rv2938	drrC	26	118.94	131.72	115.24	107.79	115.36	152.07	0.357801	1.000000	-
Rv2939	papA5	29	133.39	91.63	122.03	61.38	57.13	108.55	0.006037	0.118070	-
Rv2940c	mas	82	376.94	201.47	359.61	157.92	131.35	257.55	0.000000	0.000000	-
Rv2941	fadD28	46	163.60	111.70	150.51	62.45	67.86	152.14	0.000000	0.000000	-
Rv2942	mmpL7	43	231.21	250.52	201.14	194.78	193.18	235.72	0.414023	1.000000	-
Rv2943	-	11	213.28	194.09	210.62	238.39	229.72	199.20	0.974918	1.000000	-
Rv2943A	-	7	88.24	82.13	66.53	96.65	64.97	65.22	0.933604	1.000000	-
Rv2944	-	10	62.84	58.51	49.72	69.59	47.91	51.52	0.966760	1.000000	-
Rv2945c	lppX	10	93.80	94.99	99.33	87.16	86.46	132.71	0.865026	1.000000	-
Rv2946c	pks1	50	181.31	159.94	167.05	171.33	162.65	174.88	0.948618	1.000000	-
Rv2947c	pks15	22	99.92	111.13	96.24	112.56	106.79	114.01	0.983224	1.000000	-
Rv2948c	fadD22	48	116.18	111.23	115.50	107.95	113.62	121.65	0.982445	1.000000	-
Rv2949c	-	22	5.56	8.06	7.69	7.94	5.66	7.57	0.865547	1.000000	-
Rv2950c	fadD29	46	120.31	124.16	114.51	119.36	124.35	129.31	0.997712	1.000000	-
Rv2951c	-	24	173.09	187.66	180.59	174.73	178.63	182.03	0.998245	1.000000	-
Rv2952	-	16	61.24	73.56	60.53	61.43	64.66	83.96	0.551580	1.000000	-
Rv2953	-	25	116.54	119.63	132.06	116.35	107.70	140.44	0.891839	1.000000	-
Rv2954c	-	13	336.48	279.17	346.31	331.28	313.00	303.52	0.928496	1.000000	-
Rv2955c	-	20	172.46	181.43	176.14	165.17	162.89	199.02	0.898735	1.000000	-
Rv2956	-	18	21.37	21.49	17.75	21.09	18.41	23.97	0.993555	1.000000	-
Rv2957	-	18	213.22	211.04	209.08	208.46	221.94	234.09	0.989053	1.000000	-
Rv2958c	-	25	108.89	124.55	111.71	132.09	126.31	118.72	0.974538	1.000000	-
Rv2959c	-	31	18.71	18.38	10.80	13.08	19.25	19.76	0.570161	1.000000	-
Rv2960c	-	7	187.89	167.88	171.06	170.58	212.64	179.24	0.962326	1.000000	-
Rv2961	-	7	281.34	241.13	239.30	280.97	232.64	245.04	0.970202	1.000000	-
Rv2962c	-	21	125.98	128.09	104.70	127.98	116.92	123.61	0.967081	1.000000	-
Rv2963	-	24	79.51	81.29	84.88	82.02	93.95	94.25	0.890826	1.000000	-
Rv2964	purU	17	119.39	117.42	130.88	103.30	105.99	119.37	0.951355	1.000000	-
Rv2965c	coaD	4	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv2966c	-	7	170.42	190.10	173.42	190.45	182.15	144.55	0.953671	1.000000	-
Rv2967c	pca	63	98.09	101.35	99.62	100.20	79.65	102.58	0.619591	1.000000	-
Rv2968c	-	11	2.03	3.69	2.55	3.05	4.27	8.16	0.709374	1.000000	-
Rv2969c	-	11	0.00	0.00	0.00	0.45	0.00	0.00	0.604383	1.000000	-
Rv2970c	lipN	17	180.06	205.32	198.98	183.30	189.87	171.79	0.941066	1.000000	-
Rv2970A	-	4	13.28	30.65	22.66	17.66	17.60	43.50	0.000998	0.023708	-
Rv2971	-	15	5.54	14.34	14.18	9.70	9.08	10.85	0.945185	1.000000	-
Rv2972c	-	12	293.88	243.13	252.47	249.12	235.83	254.44	0.957371	1.000000	-
Rv2973c	recG	30	113.47	130.29	121.65	116.73	114.51	132.52	0.931410	1.000000	-
Rv2974c	-	20	220.19	206.86	204.52	198.88	208.99	213.71	0.996510	1.000000	-
Rv2975c	-	2	84.52	162.72	81.42	73.64	97.50	127.23	0.883942	1.000000	-
Rv2976c	ung	8	116.13	134.67	129.55	113.37	99.79	80.43	0.721419	1.000000	-
Rv2977c	thiL	9	6.69	8.06	8.67	11.81	8.32	11.78	0.980140	1.000000	-
Rv2978c	-	12	123.74	112.02	127.54	116.06	114.90	121.77	0.998944	1.000000	-
Rv2979c	-	8	216.87	183.30	235.10	175.70	168.76	187.87	0.809867	1.000000	-
Rv2980	-	6	120.86	111.61	75.41	87.11	82.68	107.20	0.690795	1.000000	-
Rv2981c	ddl	14	2.41	5.41	1.56	0.00	2.51	4.73	0.468331	1.000000	-
Rv2982c	gpsA	13	304.12	301.02	293.21	263.57	256.50	220.71	0.673266	1.000000	-
Rv2983	-	6	75.84	75.65	55.27	58.56	82.09	56.02	0.764690	1.000000	-
Rv2984	ppk	32	0.48	0.32	0.39	0.57	0.59	0.63	0.991051	1.000000	-
Rv2985	mutT1	15	46.96	54.25	68.36	57.00	55.87	45.01	0.494899	1.000000	-
Rv2986c	hupB	8	7.13	10.74	4.73	6.12	7.89	7.67	0.843044	1.000000	-
Rv2987c	leuD	10	5.42	6.59	0.63	5.22	0.73	4.12	0.220655	1.000000	-
Rv2988c	leuC	13	44.95	34.51	29.16	12.94	5.68	31.58	0.000166	0.004709	-
Rv2989	-	8	86.63	100.16	98.77	92.13	70.26	120.52	0.964054	1.000000	-
Rv2990c	-	18	152.29	159.56	148.18	134.58	165.55	199.63	0.557960	1.000000	-
Rv2991	-	5	236.70	200.89	249.35	176.58	179.90	251.85	0.774513	1.000000	-
Rv2992c	gltX	19	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv2993c	-	9	7.35	14.08	6.63	4.14	6.82	6.66	0.436112	1.000000	-
Rv2994	-	20	67.24	75.66	76.56	83.46	76.10	80.06	0.949490	1.000000	-
Rv2995c	leuB	10	36.67	41.17	27.19	12.98	3.25	25.10	0.000508	0.013343	-
Rv2996c	serA1	11	16.24	16.23	14.44	27.49	40.40	12.99	0.003041	0.064543	-
Rv2997	-	16	125.59	134.99	145.04	124.19	141.12	96.67	0.862492	1.000000	-
Rv2998	-	5	86.50	110.00	141.30	100.31	93.65	131.66	0.550045	1.000000	-
Rv2998A	-	2	20.77	15.52	34.40	39.33	32.95	7.78	0.709608	1.000000	-
Rv2999	lppY	11	108.44	72.36	115.47	98.10	74.77	80.89	0.816211	1.000000	-
Rv3000	-	8	79.39	96.65	118.78	104.03	75.76	85.87	0.824887	1.000000	-
Rv3001c	ilvC	13	2.72	0.80	2.38	2.14	0.00	2.58	0.458104	1.000000	-
Rv3002c	ilvH	4	16.93	15.30	16.49	11.73	12.86	27.86	0.713294	1.000000	-
Rv3003c	ilvB1	15	8.72	9.95	8.29	23.58	10.63	11.17	0.002458	0.053327	-
Rv3004	cfp6	4	101.66	42.09	77.26	72.75	41.71	47.76	0.500945	1.000000	-
Rv3005c	-	21	104.94	113.23	127.93	128.51	129.02	105.04	0.747455	1.000000	-
Rv3006	lppZ	16	0.96	1.87	1.18	0.00	2.55	1.60	0.165238	1.000000	-
Rv3007c	-	9	113.61	131.80	128.65	126.71	141.32	157.53	0.825073	1.000000	-
Rv3008	-	18	181.51	220.89	188.74	185.30	199.09	210.84	0.910424	1.000000	-
Rv3009c	gatB	20	2.43	1.79	1.72	5.29	7.26	6.32	0.711262	1.000000	-
Rv3010c	pfkA	12	83.62	116.44	127.70	120.48	98.82	127.16	0.496770	1.000000	-
Rv3011c	gatA	23	1.14	0.44	1.10	1.46	1.73	1.79	0.940794	1.000000	-
Rv3012c	gatC	0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	TA sites <= 1
Rv3013	-	8	292.63	294.85	325.84	269.91	268.39	220.17	0.635917	1.000000	-
Rv3014c	ligA	13	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv3015c	-	9	204.58	200.27	164.41	187.88	197.59	194.81	0.989686	1.000000	-
Rv3016	lpqA	11	65.00	61.44	63.14	65.20	71.45	82.65	0.972793	1.000000	-
Rv3017c	esxQ	10	193.28	190.19	198.13	153.85	190.08	209.91	0.856194	1.000000	-
Rv3018c	PPE46	28	151.22	119.23	135.47	145.08	145.72	138.36	0.986959	1.000000	-
Rv3018A	PE27A	0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	TA sites <= 1
Rv3019c	esxR	9	20.67	30.06	27.78	30.08	29.66	43.77	0.228237	1.000000	-
Rv3020c	esxS	8	72.39	73.26	76.71	55.01	56.29	85.80	0.852426	1.000000	-
Rv3021c	PPE47	22	83.71	63.07	78.77	68.79	84.56	65.37	0.976641	1.000000	-
Rv3022c	PPE48	5	196.28	159.24	174.33	179.67	205.74	208.39	0.984700	1.000000	-
Rv3022A	PE29	6	200.24	217.30	219.63	183.57	200.89	185.92	0.997550	1.000000	-
Rv3023c	-	16	254.99	247.77	271.71	252.30	251.31	243.49	0.997721	1.000000	-
Rv3024c	trmU	13	61.59	36.33	66.97	48.93	73.07	25.72	0.025268	0.373182	-
Rv3025c	iscS	17	21.79	15.84	31.10	11.65	23.63	11.48	0.053110	0.662219	-
Rv3026c	-	10	209.25	184.06	200.82	200.83	192.80	190.67	0.999374	1.000000	-
Rv3027c	-	18	214.51	207.41	217.85	228.41	206.70	223.44	0.990822	1.000000	-
Rv3028c	fixB	11	9.66	1.40	8.60	0.00	0.41	0.92	0.000001	0.000040	-
Rv3029c	fixA	8	10.40	0.00	10.61	0.00	0.00	0.68	0.000082	0.002476	-
Rv3030	-	11	20.45	25.34	3.44	8.42	15.01	12.26	0.209160	1.000000	-
Rv3031	-	20	3.59	0.77	3.47	0.22	0.36	0.78	0.000527	0.013739	-
Rv3032	-	10	16.52	6.59	20.07	10.22	15.61	1.95	0.079781	0.906913	-
Rv3033	-	3	86.55	84.92	66.93	88.22	72.18	92.75	0.997274	1.000000	-
Rv3034c	-	13	110.25	106.32	97.93	106.47	110.45	94.05	0.999715	1.000000	-
Rv3035	-	18	1.16	0.28	1.05	0.00	4.82	0.30	0.000004	0.000173	-
Rv3036c	TB22.2	16	287.87	228.53	229.13	255.22	218.56	248.02	0.816233	1.000000	-
Rv3037c	-	15	269.75	215.94	279.12	248.82	244.25	222.58	0.831862	1.000000	-
Rv3038c	-	14	15.16	13.84	13.84	23.48	40.98	15.28	0.024530	0.365207	-
Rv3039c	echA17	10	61.24	73.76	90.38	85.63	80.87	73.93	0.982488	1.000000	-
Rv3040c	-	13	86.64	109.01	115.63	99.62	120.18	112.57	0.923358	1.000000	-
Rv3041c	-	9	213.12	230.09	201.21	212.69	244.29	226.51	0.996087	1.000000	-
Rv3042c	serB2	11	28.20	33.11	24.40	46.93	46.22	28.11	0.280616	1.000000	-
Rv3043c	ctaD	26	5.43	5.50	3.97	4.65	2.60	5.24	0.935670	1.000000	-
Rv3044	fecB	16	7.91	11.09	1.97	5.14	18.23	1.90	0.000016	0.000566	-
Rv3045	adhC	20	140.13	167.41	151.14	136.65	146.87	139.27	0.815933	1.000000	-
Rv3046c	-	2	68.92	38.17	57.95	48.45	73.08	57.73	0.639210	1.000000	-
Rv3047c	-	5	135.05	169.82	108.86	165.03	144.21	130.04	0.517535	1.000000	-
Rv3048c	nrdF	23	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv3049c	-	33	167.76	149.04	172.41	122.51	121.73	143.50	0.055535	0.689467	-
Rv3050c	-	8	65.02	67.39	80.42	77.16	71.74	70.92	0.983714	1.000000	-
Rv3051c	nrdE	55	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv3052c	nrdI	14	19.24	22.85	29.98	4.53	0.00	34.95	0.000000	0.000006	-
Rv3053c	nrdH	8	0.00	1.31	0.00	0.00	0.00	0.00	0.308863	1.000000	-
Rv3054c	-	6	232.94	250.15	307.74	258.56	253.68	299.25	0.949001	1.000000	-
Rv3055	-	7	125.33	168.60	156.88	177.66	171.86	121.15	0.448332	1.000000	-
Rv3056	dinP	20	203.47	215.63	214.53	216.51	204.25	190.18	0.979408	1.000000	-
Rv3057c	-	18	117.39	181.73	164.91	243.24	257.63	141.83	0.000138	0.004093	-
Rv3058c	-	9	142.95	163.18	138.60	135.77	119.20	150.76	0.965143	1.000000	-
Rv3059	cyp136	24	208.33	190.63	194.66	184.05	190.22	215.00	0.954210	1.000000	-
Rv3060c	-	24	139.90	142.21	140.20	146.77	151.30	149.84	0.996626	1.000000	-
Rv3061c	fadE22	23	150.79	150.99	166.58	162.08	157.46	145.96	0.980056	1.000000	-
Rv3062	ligB	20	148.12	145.68	163.41	131.26	107.46	135.42	0.631765	1.000000	-
Rv3063	cstA	30	214.07	219.32	205.01	212.96	206.95	217.70	0.997892	1.000000	-
Rv3064c	-	9	72.97	81.94	67.10	84.41	75.53	97.46	0.899627	1.000000	-
Rv3065	mmr	9	150.66	125.55	135.97	117.58	121.42	113.30	0.872233	1.000000	-
Rv3066	-	10	179.38	175.86	147.53	98.25	111.03	179.77	0.106481	1.000000	-
Rv3067	-	8	92.56	94.62	84.09	76.86	101.97	80.37	0.683192	1.000000	-
Rv3068c	pgmA	32	179.12	162.92	159.89	170.44	150.76	176.60	0.873364	1.000000	-
Rv3069	ccrB	6	58.57	34.12	47.50	59.63	50.53	47.70	0.886288	1.000000	-
Rv3070	ccrB	9	143.11	133.20	153.31	154.37	136.06	109.42	0.936275	1.000000	-
Rv3071	-	16	97.25	101.63	112.46	98.91	79.50	103.19	0.792898	1.000000	-
Rv3072c	-	9	116.64	82.74	94.74	96.83	102.69	74.34	0.713274	1.000000	-
Rv3073c	-	4	197.62	149.86	178.62	164.69	180.23	192.38	0.977166	1.000000	-
Rv3074	-	15	172.73	186.87	196.19	179.76	161.66	160.74	0.908966	1.000000	-
Rv3075c	-	16	190.70	163.74	153.51	148.70	149.89	161.97	0.872988	1.000000	-
Rv3076	-	5	135.05	154.10	120.66	91.88	100.50	110.13	0.806845	1.000000	-
Rv3077	-	37	176.97	155.19	163.36	168.88	161.45	151.75	0.975549	1.000000	-
Rv3078	hab	6	59.18	51.52	82.98	69.59	60.61	95.55	0.132303	1.000000	-
Rv3079c	-	17	108.73	97.65	86.03	92.10	102.16	104.96	0.972444	1.000000	-
Rv3080c	pknK	32	150.76	138.50	138.17	142.69	136.02	130.53	0.940429	1.000000	-
Rv3081	-	18	64.07	68.77	73.35	74.64	55.05	61.64	0.794381	1.000000	-
Rv3082c	virS	19	157.37	144.50	149.44	117.88	107.72	135.95	0.554369	1.000000	-
Rv3083	-	26	151.53	152.11	170.19	148.48	155.26	143.27	0.949265	1.000000	-
Rv3084	lipR	14	123.03	102.69	120.11	122.29	127.55	110.52	0.922103	1.000000	-
Rv3085	-	4	80.53	82.95	114.12	88.67	51.45	108.73	0.587847	1.000000	-
Rv3086	adhD	11	94.68	114.04	110.78	105.07	106.48	112.56	0.993786	1.000000	-
Rv3087	-	14	290.43	248.69	241.12	264.27	207.51	250.12	0.353914	1.000000	-
Rv3088	-	13	122.18	111.43	139.66	112.58	148.26	125.11	0.669469	1.000000	-
Rv3089	fadD13	22	135.77	117.25	135.72	131.58	139.24	112.29	0.897093	1.000000	-
Rv3090	-	9	161.35	163.95	140.56	171.95	168.23	190.39	0.924014	1.000000	-
Rv3091	-	15	231.05	201.63	235.90	242.41	220.64	223.66	0.935605	1.000000	-
Rv3092c	-	9	397.60	371.72	418.76	395.23	336.33	362.48	0.963838	1.000000	-
Rv3093c	-	17	185.42	170.01	207.70	169.40	172.56	175.61	0.964050	1.000000	-
Rv3094c	-	11	292.28	230.73	279.53	236.15	254.29	240.07	0.831010	1.000000	-
Rv3095	-	8	223.93	243.41	209.82	261.14	209.40	274.87	0.804732	1.000000	-
Rv3096	-	15	237.74	275.62	221.47	236.35	247.30	248.97	0.987329	1.000000	-
Rv3097c	PE_PGRS63	28	155.82	154.82	147.25	153.30	155.84	173.94	0.971004	1.000000	-
Rv3098c	-	8	116.17	122.00	120.72	113.45	107.05	128.86	0.993877	1.000000	-
Rv3099c	-	6	286.22	304.81	338.06	335.85	297.69	348.26	0.896776	1.000000	-
Rv3100c	smpB	4	5.19	7.65	1.57	4.62	5.86	3.70	0.890414	1.000000	-
Rv3101c	ftsX	18	22.53	33.69	26.70	45.12	41.49	28.28	0.168290	1.000000	-
Rv3102c	ftsE	8	44.72	50.73	53.55	45.53	60.25	41.10	0.927919	1.000000	-
Rv3103c	-	7	54.76	52.25	58.59	55.39	63.68	62.12	0.994051	1.000000	-
Rv3104c	-	11	206.23	196.09	224.99	191.78	244.09	190.18	0.914008	1.000000	-
Rv3105c	prfB	17	7.96	8.99	9.75	14.27	11.83	14.73	0.956927	1.000000	-
Rv3106	fprA	18	141.28	152.38	151.94	154.16	157.33	136.33	0.986622	1.000000	-
Rv3107c	agpS	22	97.82	87.83	99.71	88.98	103.67	96.70	0.935357	1.000000	-
Rv3108	-	7	57.54	63.56	61.21	67.76	72.44	63.94	0.986799	1.000000	-
Rv3109	moaA1	41	26.62	24.31	30.80	40.89	39.62	40.77	0.092243	1.000000	-
Rv3110	moaB1	9	94.56	91.85	93.10	104.95	106.88	107.28	0.993310	1.000000	-
Rv3111	moaC	13	7.21	4.31	4.32	4.36	7.36	8.56	0.449269	1.000000	-
Rv3112	moaD1	7	13.62	16.77	13.85	27.44	21.16	22.94	0.787499	1.000000	-
Rv3113	-	8	33.26	47.43	35.12	37.69	43.99	37.22	0.887155	1.000000	-
Rv3114	-	8	63.64	52.38	72.26	88.31	62.38	35.81	0.107364	1.000000	-
Rv3115	-	16	245.44	246.56	274.90	259.62	237.54	234.02	0.981770	1.000000	-
Rv3116	moeB2	28	101.62	111.09	99.15	104.26	95.65	119.56	0.890978	1.000000	-
Rv3117	cysA3	15	155.63	197.11	170.79	191.94	185.79	193.14	0.981354	1.000000	-
Rv3118	sseC1	2	277.61	318.27	282.99	329.71	316.60	204.43	0.582125	1.000000	-
Rv3119	moaE1	12	95.52	102.89	107.52	108.32	112.35	111.33	0.903064	1.000000	-
Rv3120	-	9	64.57	70.52	72.96	71.49	62.05	82.70	0.976467	1.000000	-
Rv3121	cyp141	26	90.72	101.70	84.89	88.84	90.80	91.70	0.994798	1.000000	-
Rv3122	-	7	364.38	316.47	343.60	377.35	342.41	342.31	0.995719	1.000000	-
Rv3123	-	4	194.75	241.93	183.96	199.21	159.33	158.79	0.909180	1.000000	-
Rv3124	-	30	37.81	44.12	51.58	47.02	56.24	56.27	0.442462	1.000000	-
Rv3125c	PPE49	21	142.02	119.52	135.50	125.26	133.72	125.84	0.982728	1.000000	-
Rv3126c	-	3	61.46	32.13	55.06	59.85	43.57	69.64	0.723218	1.000000	-
Rv3127	-	18	37.13	37.20	35.43	36.03	30.20	42.84	0.987733	1.000000	-
Rv3129	-	4	51.97	20.50	46.04	55.74	70.76	36.55	0.461657	1.000000	-
Rv3130c	-	27	125.45	87.94	115.87	124.76	94.37	102.58	0.400953	1.000000	-
Rv3131	-	15	63.28	51.00	88.85	61.97	52.56	58.62	0.492072	1.000000	-
Rv3132c	devS	31	80.11	68.97	95.06	81.26	71.75	63.10	0.463709	1.000000	-
Rv3133c	devR	12	164.14	113.01	164.28	138.43	139.83	142.91	0.548170	1.000000	-
Rv3134c	-	9	117.06	101.25	109.58	127.23	116.62	127.13	0.932724	1.000000	-
Rv3135	PPE50	9	184.77	171.90	190.25	152.35	147.08	166.93	0.788932	1.000000	-
Rv3136	PPE51	21	44.72	47.91	44.85	32.14	44.45	42.01	0.759419	1.000000	-
Rv3137	-	8	0.48	0.00	0.79	0.00	0.91	0.00	0.637378	1.000000	-
Rv3138	pflA	21	76.93	73.64	88.68	74.73	76.17	93.05	0.848603	1.000000	-
Rv3139	fadE24	22	80.15	35.26	80.86	11.30	26.14	22.03	0.000000	0.000000	-
Rv3140	fadE23	19	31.70	16.28	51.74	4.25	8.36	11.05	0.000000	0.000000	-
Rv3141	fadB4	16	89.76	111.48	111.91	109.04	101.14	121.46	0.494824	1.000000	-
Rv3142c	-	11	56.93	67.40	59.58	55.72	54.45	46.81	0.987497	1.000000	-
Rv3143	-	4	5.13	1.25	1.57	3.63	8.80	8.94	0.375592	1.000000	-
Rv3144c	PPE52	17	266.32	259.62	236.59	272.63	248.36	238.49	0.976214	1.000000	-
Rv3145	nuoA	12	299.72	288.29	306.75	323.02	281.39	261.62	0.968088	1.000000	-
Rv3146	nuoB	9	185.07	172.36	141.01	197.42	173.31	158.39	0.947627	1.000000	-
Rv3147	nuoC	14	116.82	116.41	104.50	113.25	118.13	112.54	0.998382	1.000000	-
Rv3148	nuoD	22	36.51	37.68	31.54	34.17	36.41	35.76	0.990132	1.000000	-
Rv3149	nuoE	9	299.26	281.62	325.79	301.96	255.04	221.81	0.715948	1.000000	-
Rv3150	nuoF	25	150.13	129.58	143.09	129.47	130.95	127.31	0.881093	1.000000	-
Rv3151	nuoG	30	100.80	74.84	104.73	101.55	96.82	83.50	0.425919	1.000000	-
Rv3152	nuoH	27	100.36	99.94	98.99	108.19	107.91	110.03	0.956428	1.000000	-
Rv3153	nuoI	23	170.94	159.95	152.71	137.99	149.86	132.86	0.812513	1.000000	-
Rv3154	nuoJ	10	171.11	156.02	153.55	159.25	152.15	117.11	0.489650	1.000000	-
Rv3155	nuoK	6	43.61	59.37	47.89	36.53	59.50	47.71	0.451535	1.000000	-
Rv3156	nuoL	35	110.57	123.94	120.38	120.79	111.55	108.48	0.958017	1.000000	-
Rv3157	nuoM	33	78.32	64.38	77.78	62.11	63.96	65.07	0.709163	1.000000	-
Rv3158	nuoN	32	235.15	213.46	208.10	219.68	220.24	201.62	0.874624	1.000000	-
Rv3159c	PPE53	26	144.94	132.86	104.31	118.50	96.00	113.41	0.882947	1.000000	-
Rv3160c	-	7	41.36	43.58	22.36	19.48	18.95	49.79	0.365170	1.000000	-
Rv3161c	-	24	117.80	150.00	133.99	138.32	124.45	135.62	0.923800	1.000000	-
Rv3162c	-	6	129.58	137.59	107.34	135.06	141.63	164.95	0.989387	1.000000	-
Rv3163c	-	15	190.71	156.96	151.73	166.73	164.00	158.26	0.966668	1.000000	-
Rv3164c	moxR3	12	118.48	96.37	87.74	91.72	81.42	85.42	0.697815	1.000000	-
Rv3165c	-	6	32.93	35.01	18.84	27.29	37.63	34.31	0.389554	1.000000	-
Rv3166c	-	16	148.95	134.31	148.18	148.55	121.68	174.62	0.735647	1.000000	-
Rv3167c	-	10	124.98	144.41	119.62	134.54	129.11	114.72	0.976667	1.000000	-
Rv3168	-	19	73.18	74.15	99.78	71.49	86.63	77.98	0.608788	1.000000	-
Rv3169	-	19	61.59	71.00	61.18	75.73	67.14	55.32	0.984114	1.000000	-
Rv3170	aofH	18	76.84	68.54	85.51	94.84	81.51	75.08	0.947245	1.000000	-
Rv3171c	hpx	13	229.10	216.85	185.62	193.06	174.61	177.99	0.906431	1.000000	-
Rv3172c	-	17	49.64	65.78	50.91	51.84	46.87	60.46	0.713166	1.000000	-
Rv3173c	-	8	87.34	88.56	93.60	90.19	87.07	77.98	0.997226	1.000000	-
Rv3174	-	13	144.90	113.02	147.99	130.96	121.99	133.96	0.912435	1.000000	-
Rv3175	-	21	162.30	142.14	159.72	120.71	142.88	137.20	0.845195	1.000000	-
Rv3176c	mesT	14	167.44	194.46	162.65	185.66	186.88	163.77	0.939907	1.000000	-
Rv3177	-	8	43.71	57.42	41.37	42.36	47.38	54.23	0.784147	1.000000	-
Rv3178	-	7	40.88	55.33	63.00	38.72	48.99	63.47	0.630778	1.000000	-
Rv3179	-	14	198.43	222.31	207.05	214.53	215.98	224.96	0.971789	1.000000	-
Rv3180c	-	6	156.86	167.55	158.95	154.29	148.31	136.24	0.988951	1.000000	-
Rv3181c	-	6	58.27	39.70	35.94	42.28	28.40	25.83	0.748577	1.000000	-
Rv3182	-	1	51.14	61.20	25.25	78.87	81.20	51.40	1.000000	1.000000	TA sites <= 1
Rv3183	-	3	284.89	252.60	272.96	196.27	220.19	205.79	0.830922	1.000000	-
Rv3184	-	4	208.18	253.08	256.75	252.77	248.67	187.78	0.830780	1.000000	-
Rv3185	-	25	292.31	301.23	322.53	309.62	301.76	302.72	0.992206	1.000000	-
Rv3186	-	4	193.22	238.41	184.93	252.44	222.16	169.54	0.730202	1.000000	-
Rv3187	-	25	278.10	301.67	340.74	317.03	285.19	293.08	0.779316	1.000000	-
Rv3188	-	7	102.38	162.10	128.85	106.39	125.53	126.91	0.548624	1.000000	-
Rv3189	-	8	194.28	134.32	154.11	144.25	156.83	162.85	0.851647	1.000000	-
Rv3190c	-	23	167.99	180.58	160.15	146.44	164.34	188.32	0.840358	1.000000	-
Rv3191c	-	19	131.36	148.76	128.98	151.25	149.63	162.07	0.592023	1.000000	-
Rv3192	-	4	171.95	192.76	159.75	158.43	168.61	196.40	0.949013	1.000000	-
Rv3193c	-	82	19.98	33.42	23.86	40.14	49.03	28.80	0.000000	0.000000	-
Rv3194c	-	15	189.57	165.38	173.41	199.38	172.43	171.51	0.899848	1.000000	-
Rv3195	-	17	155.86	142.95	139.79	150.10	151.39	161.16	0.985835	1.000000	-
Rv3196	-	9	258.07	183.87	211.48	247.86	234.82	243.34	0.890363	1.000000	-
Rv3196A	-	1	376.08	326.80	371.59	333.11	324.10	302.86	1.000000	1.000000	TA sites <= 1
Rv3197	-	19	163.14	132.28	139.44	140.72	141.86	141.52	0.879003	1.000000	-
Rv3197A	whiB7	4	140.21	163.72	119.13	173.46	150.53	155.23	0.992872	1.000000	-
Rv3198c	uvrD2	35	21.38	28.03	17.09	21.96	27.72	22.75	0.923751	1.000000	-
Rv3198A	-	6	286.53	330.50	259.77	365.35	325.87	294.70	0.906807	1.000000	-
Rv3199c	nudC	8	312.48	369.32	318.03	330.46	278.59	267.73	0.943729	1.000000	-
Rv3200c	-	16	120.96	153.05	112.50	128.54	147.80	133.43	0.880724	1.000000	-
Rv3201c	-	48	153.64	127.79	132.58	159.41	140.06	144.08	0.619619	1.000000	-
Rv3202c	-	30	300.56	298.07	281.72	302.90	300.94	279.35	0.994530	1.000000	-
Rv3203	lipV	12	80.36	96.50	67.30	82.67	80.60	93.78	0.785636	1.000000	-
Rv3204	-	4	136.90	123.65	153.13	109.06	120.01	154.82	0.725374	1.000000	-
Rv3205c	-	14	55.43	99.01	55.54	89.84	126.74	84.86	0.014726	0.244827	-
Rv3206c	moeB1	24	7.48	7.45	10.01	9.37	11.28	11.60	0.995227	1.000000	-
Rv3207c	-	17	196.41	189.86	189.79	188.53	204.36	200.08	0.999751	1.000000	-
Rv3208	-	10	0.00	0.00	0.63	3.66	4.70	1.48	0.148674	1.000000	-
Rv3208A	TB9.4	5	104.17	128.26	57.02	152.17	126.96	100.08	0.000972	0.023217	-
Rv3209	-	9	282.61	284.51	298.57	280.90	277.26	252.82	0.997515	1.000000	-
Rv3210c	-	10	11.57	27.51	10.61	18.75	17.61	26.76	0.023687	0.357991	-
Rv3211	rhlE	24	102.30	105.79	96.57	78.05	76.25	93.24	0.435129	1.000000	-
Rv3212	-	21	15.64	35.54	13.68	18.18	17.11	24.89	0.103126	1.000000	-
Rv3213c	-	12	189.64	269.68	226.46	244.86	215.20	207.47	0.707853	1.000000	-
Rv3214	gpm2	11	23.85	51.94	47.43	61.77	66.28	39.93	0.039382	0.523783	-
Rv3215	entC	16	17.99	22.23	45.03	130.99	96.98	14.80	0.000000	0.000000	-
Rv3216	-	6	312.51	199.71	238.18	224.00	223.46	234.28	0.387227	1.000000	-
Rv3217c	-	3	218.45	238.03	269.91	257.06	225.54	217.16	0.710089	1.000000	-
Rv3218	-	18	95.22	123.08	108.51	117.04	122.72	101.31	0.926789	1.000000	-
Rv3219	whiB1	4	0.00	6.29	1.57	0.00	16.93	0.00	0.060544	0.738750	-
Rv3220c	-	21	257.22	150.97	252.11	124.95	139.02	199.62	0.000000	0.000002	-
Rv3221c	TB7.3	2	0.00	0.00	3.15	0.00	0.00	0.00	0.317206	1.000000	-
Rv3221A	-	2	0.00	7.57	3.15	2.17	2.25	7.40	0.372987	1.000000	-
Rv3222c	-	7	0.00	0.00	0.00	0.69	0.00	0.00	0.607960	1.000000	-
Rv3223c	sigH	15	115.94	173.28	108.62	145.76	171.42	168.87	0.019758	0.310992	-
Rv3224	-	16	190.18	160.75	185.28	183.46	172.05	162.02	0.992142	1.000000	-
Rv3224A	-	3	17.32	20.53	11.47	13.91	21.05	17.10	0.907287	1.000000	-
Rv3224B	-	3	156.84	130.68	143.54	185.98	163.22	166.12	0.866812	1.000000	-
Rv3225c	-	28	243.91	259.76	247.32	239.50	227.61	254.04	0.980917	1.000000	-
Rv3226c	-	6	277.22	223.72	260.65	216.34	205.27	243.13	0.957473	1.000000	-
Rv3227	aroA	8	0.00	1.27	0.00	3.50	0.56	0.00	0.157222	1.000000	-
Rv3228	-	9	43.32	59.83	40.40	71.46	68.28	41.44	0.177980	1.000000	-
Rv3229c	-	24	74.20	100.45	57.26	61.54	58.92	80.11	0.032755	0.458570	-
Rv3230c	-	16	61.52	101.84	54.82	44.70	60.83	63.25	0.029170	0.415679	-
Rv3231c	-	6	415.50	358.45	392.51	303.40	273.54	318.33	0.477783	1.000000	-
Rv3232c	pvdS	24	298.95	325.14	301.46	326.84	316.52	323.95	0.965910	1.000000	-
Rv3233c	-	12	217.04	177.77	193.79	175.69	177.71	211.85	0.865968	1.000000	-
Rv3234c	-	18	185.70	213.26	194.91	211.75	191.64	200.66	0.983070	1.000000	-
Rv3235	-	6	107.47	101.54	114.02	112.91	116.98	102.72	0.999523	1.000000	-
Rv3236c	-	14	74.04	89.06	78.40	73.89	77.59	84.00	0.995375	1.000000	-
Rv3237c	-	9	174.31	172.46	162.92	160.26	145.72	178.72	0.984204	1.000000	-
Rv3238c	-	22	157.85	177.93	150.36	156.53	160.14	174.91	0.939032	1.000000	-
Rv3239c	-	56	241.79	223.91	224.75	219.80	214.15	218.27	0.978184	1.000000	-
Rv3240c	secA1	46	12.14	13.29	11.47	14.85	15.61	11.35	0.995352	1.000000	-
Rv3241c	-	12	252.53	292.82	239.82	287.20	274.17	268.04	0.851630	1.000000	-
Rv3242c	-	4	227.52	258.22	192.26	232.40	248.94	195.62	0.966453	1.000000	-
Rv3243c	-	4	175.09	118.30	137.77	142.12	142.03	199.38	0.795454	1.000000	-
Rv3244c	lpqB	21	0.37	0.25	0.00	0.00	0.00	0.51	0.328273	1.000000	-
Rv3245c	mtrB	20	0.19	1.27	0.31	0.00	1.54	0.00	0.024116	0.360378	-
Rv3246c	mtrA	11	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv3247c	tmk	10	13.60	7.63	7.80	14.49	12.64	5.61	0.889160	1.000000	-
Rv3248c	sahH	24	0.00	0.41	0.00	0.21	0.68	0.00	0.321428	1.000000	-
Rv3249c	-	13	83.06	129.14	85.41	126.77	137.77	91.91	0.661643	1.000000	-
Rv3250c	rubB	3	191.68	219.16	214.66	207.80	177.49	189.24	0.985881	1.000000	-
Rv3251c	rubA	4	216.38	280.08	207.32	205.12	227.40	227.08	0.946489	1.000000	-
Rv3252c	alkB	31	272.23	272.05	284.83	268.38	269.90	293.66	0.984801	1.000000	-
Rv3253c	-	25	139.83	129.62	138.86	106.79	111.66	136.22	0.612188	1.000000	-
Rv3254	-	20	197.53	188.94	178.55	183.22	184.92	193.15	0.996672	1.000000	-
Rv3255c	manA	21	0.00	0.25	0.30	0.00	0.00	0.26	0.545350	1.000000	-
Rv3256c	-	9	62.66	112.40	64.99	100.25	91.23	81.60	0.067284	0.796623	-
Rv3257c	manB	24	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv3258c	-	5	8.35	4.98	6.31	3.58	9.74	7.16	0.933262	1.000000	-
Rv3259	-	2	285.26	317.29	418.64	293.31	291.95	293.34	0.157025	1.000000	-
Rv3260c	whiB2	2	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv3261	fbiA	14	216.28	177.80	235.17	117.94	113.67	172.02	0.243206	1.000000	-
Rv3262	fbiB	13	116.71	98.49	135.34	111.25	125.49	89.31	0.488903	1.000000	-
Rv3263	-	29	185.03	186.58	175.12	164.95	156.23	190.54	0.897215	1.000000	-
Rv3264c	manB	17	12.10	15.33	13.22	14.40	9.39	9.11	0.993798	1.000000	-
Rv3265c	wbbL1	17	14.76	18.89	12.85	13.13	15.44	9.75	0.993706	1.000000	-
Rv3266c	rmlD	17	7.88	2.69	7.72	4.58	3.98	1.79	0.801768	1.000000	-
Rv3267	-	23	4.34	22.12	9.38	14.20	24.87	9.38	0.000000	0.000010	-
Rv3268	-	13	301.27	306.78	349.04	311.93	257.76	276.40	0.918482	1.000000	-
Rv3269	-	5	106.56	137.06	96.46	94.10	71.87	101.09	0.893407	1.000000	-
Rv3270	ctpC	17	165.66	149.02	174.81	157.00	144.53	186.85	0.943550	1.000000	-
Rv3271c	-	6	77.47	107.08	61.26	78.59	74.43	101.89	0.859123	1.000000	-
Rv3272	-	19	80.33	75.00	76.58	77.94	76.43	67.82	0.993975	1.000000	-
Rv3273	-	31	77.27	84.54	64.95	70.34	83.01	60.32	0.376288	1.000000	-
Rv3274c	fadE25	19	118.68	63.33	145.09	54.68	48.10	58.73	0.000021	0.000717	-
Rv3275c	purE	7	0.00	0.00	3.11	1.39	0.00	2.11	0.244269	1.000000	-
Rv3276c	purK	10	17.32	16.75	31.54	37.93	19.60	11.76	0.839466	1.000000	-
Rv3277	-	13	23.89	26.63	28.55	35.19	33.72	29.26	0.933805	1.000000	-
Rv3278c	-	8	78.73	66.37	62.59	64.28	68.71	101.13	0.848504	1.000000	-
Rv3279c	birA	6	0.00	0.00	0.00	0.82	3.17	0.00	0.029680	0.421431	-
Rv3280	accD5	32	0.00	0.00	0.39	0.00	0.00	0.00	0.306873	1.000000	-
Rv3281	-	3	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv3282	maf	11	45.23	55.16	59.91	66.35	51.91	52.24	0.773614	1.000000	-
Rv3283	sseA	20	144.48	102.65	175.93	42.04	48.45	78.22	0.000000	0.000000	-
Rv3284	-	5	80.86	75.14	92.46	98.32	98.00	55.21	0.231639	1.000000	-
Rv3285	accA3	26	0.00	0.00	0.00	0.18	0.00	0.00	0.600861	1.000000	-
Rv3286c	sigF	11	188.47	184.19	166.92	182.98	193.25	177.62	0.985587	1.000000	-
Rv3287c	rsbW	3	209.10	205.06	142.60	135.14	164.12	220.94	0.786796	1.000000	-
Rv3288c	usfY	10	22.54	23.50	22.19	30.07	40.63	42.78	0.260663	1.000000	-
Rv3289c	-	7	193.85	231.14	199.41	248.12	249.95	239.21	0.950438	1.000000	-
Rv3290c	lat	25	253.96	251.06	267.32	272.73	282.68	249.07	0.981821	1.000000	-
Rv3291c	-	11	110.84	109.18	89.87	136.57	102.80	120.36	0.860457	1.000000	-
Rv3292	-	20	210.43	219.92	189.81	227.11	215.98	196.13	0.979174	1.000000	-
Rv3293	pcd	16	161.87	190.11	165.80	197.11	166.24	187.28	0.914175	1.000000	-
Rv3294c	-	20	73.06	103.61	85.02	86.15	98.43	110.94	0.434822	1.000000	-
Rv3295	-	12	394.92	294.50	329.23	300.99	282.79	304.40	0.817658	1.000000	-
Rv3296	lhr	55	259.94	248.29	261.81	235.87	234.99	223.87	0.810619	1.000000	-
Rv3297	nei	10	108.15	131.51	150.47	147.72	142.45	145.27	0.872483	1.000000	-
Rv3298c	lpqC	12	136.07	135.94	137.12	134.82	128.38	147.14	0.999581	1.000000	-
Rv3299c	atsB	46	112.03	97.17	108.39	111.11	108.66	112.86	0.962865	1.000000	-
Rv3300c	-	11	107.13	122.04	140.75	139.57	94.58	103.37	0.585938	1.000000	-
Rv3301c	phoY1	10	120.55	103.56	84.77	82.16	83.64	112.80	0.598416	1.000000	-
Rv3302c	glpD2	28	0.14	0.00	0.00	0.00	0.00	0.00	0.600679	1.000000	-
Rv3303c	lpdA	22	49.99	49.55	59.75	49.03	52.45	44.24	0.972482	1.000000	-
Rv3304	-	11	161.06	136.17	126.89	134.86	119.81	129.37	0.567253	1.000000	-
Rv3305c	amiA1	20	36.44	39.75	42.89	55.60	61.75	56.31	0.428717	1.000000	-
Rv3306c	amiB1	15	108.65	173.13	94.69	142.06	132.62	115.60	0.651496	1.000000	-
Rv3307	deoD	11	125.69	129.09	128.20	149.14	133.51	118.58	0.930578	1.000000	-
Rv3308	pmmB	20	182.48	184.23	150.91	170.92	146.65	153.23	0.887255	1.000000	-
Rv3309c	upp	8	253.38	235.78	263.58	233.62	260.55	201.74	0.917441	1.000000	-
Rv3310	sapM	17	104.09	118.15	102.12	129.41	126.45	128.32	0.844170	1.000000	-
Rv3311	satS	16	49.54	85.15	41.83	105.54	105.29	75.86	0.231669	1.000000	-
Rv3312c	-	17	342.49	329.04	343.42	318.57	324.19	350.24	0.994206	1.000000	-
Rv3312A	-	5	151.81	199.71	216.75	153.41	193.23	185.92	0.545182	1.000000	-
Rv3313c	add	12	102.20	85.77	84.45	103.08	71.43	94.35	0.476706	1.000000	-
Rv3314c	deoA	12	119.38	131.01	116.85	99.17	107.66	106.93	0.646415	1.000000	-
Rv3315c	cdd	5	61.17	46.96	66.29	55.96	46.21	40.37	0.816534	1.000000	-
Rv3316	sdhC	6	70.80	91.07	88.52	59.92	101.55	101.20	0.188120	1.000000	-
Rv3317	sdhD	4	82.15	76.26	69.40	78.94	96.59	109.84	0.521467	1.000000	-
Rv3318	sdhA	31	123.82	102.82	109.16	109.04	104.62	103.42	0.930576	1.000000	-
Rv3319	sdhB	8	168.50	160.87	165.86	177.87	173.46	153.76	0.999471	1.000000	-
Rv3320c	-	5	83.20	92.05	80.64	83.75	83.16	72.96	0.993007	1.000000	-
Rv3321c	-	3	487.96	415.10	484.17	417.78	374.04	450.98	0.999195	1.000000	-
Rv3322c	-	7	282.15	263.08	309.97	263.61	259.38	279.48	0.996849	1.000000	-
Rv3323c	moaX	15	155.58	171.53	136.68	149.19	166.56	192.36	0.785398	1.000000	-
Rv3324c	moaC	10	236.81	230.77	185.00	230.04	235.44	217.71	0.993182	1.000000	-
Rv3325	-	4	191.95	224.36	204.57	246.70	230.14	168.83	0.786172	1.000000	-
Rv3326	-	25	294.65	296.09	330.67	318.28	312.54	322.98	0.968743	1.000000	-
Rv3327	-	20	158.99	194.00	174.07	181.84	178.43	199.38	0.776823	1.000000	-
Rv3328c	sigJ	12	130.70	141.51	136.39	157.07	127.88	139.91	0.968605	1.000000	-
Rv3329	-	21	177.60	187.46	186.61	208.04	180.02	176.08	0.913751	1.000000	-
Rv3330	dacB1	19	120.15	127.61	130.70	130.90	163.99	159.62	0.597268	1.000000	-
Rv3331	sugI	25	203.66	190.17	194.94	137.02	149.28	166.73	0.146192	1.000000	-
Rv3332	nagA	6	212.85	161.32	158.00	157.96	159.14	168.88	0.524071	1.000000	-
Rv3333c	-	12	89.81	79.72	71.88	86.80	95.09	99.43	0.791838	1.000000	-
Rv3334	-	9	163.30	151.70	159.80	157.95	183.75	174.83	0.988210	1.000000	-
Rv3335c	-	11	93.79	68.51	72.42	71.16	83.68	100.27	0.423595	1.000000	-
Rv3336c	trpS	15	2.51	3.04	3.75	4.94	5.11	4.27	0.973528	1.000000	-
Rv3337	-	9	67.83	68.57	50.02	83.14	76.74	78.24	0.962232	1.000000	-
Rv3338	-	4	70.90	62.50	50.75	54.80	84.54	42.53	0.562012	1.000000	-
Rv3339c	icd1	26	81.54	104.02	71.99	90.01	93.70	101.76	0.823587	1.000000	-
Rv3340	metC	17	264.62	240.23	279.88	191.45	178.11	241.44	0.126548	1.000000	-
Rv3341	metX	15	64.01	64.43	61.37	33.79	35.88	58.20	0.008886	0.167234	-
Rv3342	-	9	77.80	62.92	64.86	74.59	64.22	65.74	0.942091	1.000000	-
Rv3343c	PPE54	156	50.34	49.75	47.38	49.65	48.98	56.71	0.908870	1.000000	-
Rv3344c	PE_PGRS49	6	217.82	192.03	244.19	226.12	195.49	199.35	0.994918	1.000000	-
Rv3345c	PE_PGRS50	47	250.92	229.00	226.96	202.40	201.48	203.18	0.713551	1.000000	-
Rv3346c	-	3	295.02	276.08	279.46	319.79	330.37	336.63	0.997907	1.000000	-
Rv3347c	PPE55	120	104.92	108.34	99.49	103.10	105.43	120.33	0.812306	1.000000	-
Rv3348	-	3	331.92	347.19	279.29	243.35	251.77	261.93	0.918565	1.000000	-
Rv3349c	-	3	326.43	307.91	329.91	355.74	332.67	342.11	0.993232	1.000000	-
Rv3350c	PPE56	129	125.55	129.01	124.43	130.87	121.93	131.38	0.993145	1.000000	-
Rv3351c	-	15	311.83	328.44	305.73	342.85	307.45	290.96	0.941407	1.000000	-
Rv3352c	-	2	314.80	318.97	307.64	359.03	285.60	283.69	0.997624	1.000000	-
Rv3353c	-	3	259.23	281.45	199.18	201.72	266.82	231.73	0.416237	1.000000	-
Rv3354	-	6	468.71	503.20	574.29	499.39	445.78	418.89	0.948829	1.000000	-
Rv3355c	-	4	110.22	145.44	137.63	116.15	128.65	152.81	0.997415	1.000000	-
Rv3356c	folD	9	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv3357	-	5	140.19	185.88	155.08	145.59	133.20	160.52	0.897446	1.000000	-
Rv3358	-	4	112.67	109.17	117.27	96.39	102.50	107.74	0.997876	1.000000	-
Rv3359	-	18	256.90	266.47	250.18	266.51	259.21	254.91	0.998842	1.000000	-
Rv3360	-	2	111.27	134.97	87.45	107.80	116.88	115.48	0.617024	1.000000	-
Rv3361c	-	5	62.69	51.85	58.71	64.14	90.61	73.73	0.905543	1.000000	-
Rv3362c	-	7	79.05	66.40	111.41	87.41	88.55	103.18	0.960543	1.000000	-
Rv3363c	-	8	139.90	137.04	136.15	147.00	146.73	180.56	0.712201	1.000000	-
Rv3364c	-	4	120.61	195.79	111.68	156.30	157.19	142.03	0.745628	1.000000	-
Rv3365c	-	33	286.75	272.31	273.04	271.03	255.48	256.82	0.982046	1.000000	-
Rv3366	spoU	6	221.98	209.75	280.03	249.57	246.64	246.47	0.914522	1.000000	-
Rv3367	PE_PGRS51	23	163.42	160.89	174.06	160.44	158.64	168.45	0.998598	1.000000	-
Rv3368c	-	8	102.23	121.69	158.43	120.64	103.24	112.54	0.793034	1.000000	-
Rv3369	-	7	66.82	80.06	82.26	80.85	94.37	98.74	0.725851	1.000000	-
Rv3370c	dnaE2	35	153.99	152.84	163.83	151.54	142.17	137.67	0.838054	1.000000	-
Rv3371	-	23	108.32	81.49	100.13	87.82	92.14	113.72	0.742007	1.000000	-
Rv3372	otsB2	9	1.21	13.02	2.42	6.04	8.72	5.03	0.465659	1.000000	-
Rv3373	echA18	3	108.28	118.00	120.80	86.87	106.75	87.34	0.752994	1.000000	-
Rv3374	echA18.1	2	236.18	334.49	248.59	239.60	248.05	287.76	0.628738	1.000000	-
Rv3375	amiD	22	131.60	112.87	101.79	116.97	111.42	91.14	0.620809	1.000000	-
Rv3376	-	9	160.08	175.60	178.47	171.00	149.29	159.54	0.985519	1.000000	-
Rv3377c	-	59	70.41	73.81	70.36	62.50	66.76	67.54	0.971509	1.000000	-
Rv3378c	-	40	10.19	11.69	15.34	14.21	13.63	21.05	0.413364	1.000000	-
Rv3379c	dxs2	34	99.82	86.88	101.25	86.25	91.48	94.27	0.892407	1.000000	-
Rv3380c	-	23	305.08	313.98	340.32	327.48	301.29	303.22	0.967880	1.000000	-
Rv3381c	-	4	220.83	247.52	245.00	240.01	237.77	172.82	0.906737	1.000000	-
Rv3382c	lytB1	12	186.80	182.99	186.75	165.92	176.02	185.44	0.985572	1.000000	-
Rv3383c	idsB	19	116.68	117.54	117.61	100.52	107.48	109.23	0.978935	1.000000	-
Rv3384c	-	3	709.79	542.46	646.06	652.57	645.27	510.02	0.877666	1.000000	-
Rv3385c	-	3	197.36	188.71	225.18	176.16	168.75	205.11	0.962943	1.000000	-
Rv3386	-	11	245.30	256.00	207.33	257.69	247.14	227.21	0.998520	1.000000	-
Rv3387	-	7	451.47	390.44	431.31	483.29	393.37	331.65	0.981079	1.000000	-
Rv3388	PE_PGRS52	19	186.54	187.31	186.19	179.38	170.47	179.42	0.998983	1.000000	-
Rv3389c	-	9	237.31	250.17	213.72	235.97	244.11	247.52	0.983351	1.000000	-
Rv3390	lpqD	12	277.50	269.08	274.74	298.49	283.97	285.69	0.999009	1.000000	-
Rv3391	acrA1	35	223.67	191.52	216.02	203.12	189.35	186.41	0.813781	1.000000	-
Rv3392c	cmaA1	13	100.87	73.69	107.47	77.77	79.26	84.38	0.588939	1.000000	-
Rv3393	iunH	10	204.83	184.23	222.73	173.28	160.59	149.09	0.938461	1.000000	-
Rv3394c	-	16	143.17	116.43	132.07	140.27	125.29	141.01	0.822220	1.000000	-
Rv3395c	-	4	52.59	42.04	63.22	36.62	34.71	47.58	0.863805	1.000000	-
Rv3395A	-	10	59.73	55.05	64.75	57.74	61.11	59.01	0.997807	1.000000	-
Rv3396c	guaA	16	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv3397c	phyA	19	98.06	96.66	111.10	85.15	79.33	97.82	0.793799	1.000000	-
Rv3398c	idsA1	11	95.78	108.73	117.08	75.05	105.90	70.76	0.514379	1.000000	-
Rv3399	-	18	65.08	66.63	74.21	81.50	72.95	72.01	0.942164	1.000000	-
Rv3400	-	14	125.10	140.36	138.25	135.67	148.59	139.94	0.994296	1.000000	-
Rv3401	-	36	265.99	258.20	248.09	240.45	245.98	223.09	0.951242	1.000000	-
Rv3402c	-	28	242.13	251.34	254.63	246.11	257.22	252.25	0.998714	1.000000	-
Rv3403c	-	26	321.17	323.83	326.85	322.35	330.63	305.48	0.998558	1.000000	-
Rv3404c	-	10	199.96	214.13	190.47	199.07	188.04	221.22	0.991664	1.000000	-
Rv3405c	-	9	233.24	224.23	261.43	207.44	256.90	221.90	0.997348	1.000000	-
Rv3406	-	17	242.34	230.12	223.92	217.60	213.16	198.62	0.991331	1.000000	-
Rv3407	-	3	180.66	180.08	169.96	216.14	207.02	193.86	0.968431	1.000000	-
Rv3408	-	9	341.71	331.71	332.10	363.79	348.90	347.95	0.999292	1.000000	-
Rv3409c	choD	22	250.03	211.67	273.23	182.98	208.34	178.60	0.178824	1.000000	-
Rv3410c	guaB3	14	211.71	170.73	213.34	44.89	71.57	142.53	0.001349	0.031119	-
Rv3411c	guaB2	15	5.10	4.13	5.01	6.08	8.71	4.37	0.976747	1.000000	-
Rv3412	-	9	74.27	94.38	90.86	137.37	114.91	94.93	0.103378	1.000000	-
Rv3413c	-	6	198.13	140.22	147.75	166.18	173.79	150.66	0.987072	1.000000	-
Rv3414c	sigD	10	164.15	173.41	144.78	158.59	154.32	184.62	0.965141	1.000000	-
Rv3415c	-	10	394.54	355.31	343.44	337.97	351.88	345.51	0.993824	1.000000	-
Rv3416	whiB3	4	256.22	273.31	255.62	298.20	333.57	251.20	0.821037	1.000000	-
Rv3417c	groEL	16	84.84	105.78	59.24	69.46	79.26	89.69	0.566301	1.000000	-
Rv3418c	groES	4	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv3419c	gcp	12	59.04	62.16	50.28	58.39	38.95	53.36	0.499071	1.000000	-
Rv3420c	rimI	11	88.66	130.89	87.53	129.42	127.94	116.85	0.045198	0.586116	-
Rv3421c	-	12	51.29	60.72	36.57	58.77	33.38	50.59	0.048551	0.616288	-
Rv3422c	-	6	32.81	27.19	37.47	40.82	15.64	17.54	0.245463	1.000000	-
Rv3423c	alr	21	1.35	0.00	0.00	0.00	0.21	0.74	0.062228	0.750114	-
Rv3424c	-	10	91.74	99.30	96.86	105.72	106.32	93.86	0.985943	1.000000	-
Rv3425	PPE57	22	78.60	91.50	70.93	80.98	97.19	93.83	0.850015	1.000000	-
Rv3426	PPE58	25	10.92	20.75	20.39	24.61	19.85	20.23	0.297801	1.000000	-
Rv3427c	-	11	92.84	90.26	80.18	77.49	79.69	91.72	0.990644	1.000000	-
Rv3428c	-	17	89.84	82.36	105.12	82.00	94.06	66.01	0.594362	1.000000	-
Rv3429	PPE59	29	7.99	6.52	7.12	10.44	8.13	8.56	0.880666	1.000000	-
Rv3430c	-	23	234.21	208.47	212.94	220.68	209.25	184.22	0.968956	1.000000	-
Rv3431c	-	9	203.19	165.53	174.98	189.34	186.48	195.72	0.991143	1.000000	-
Rv3432c	gadB	22	195.16	190.61	191.90	184.99	207.85	183.55	0.984297	1.000000	-
Rv3433c	-	9	398.61	382.02	358.53	396.81	356.33	335.50	0.992157	1.000000	-
Rv3434c	-	11	191.68	177.30	187.22	158.10	166.62	244.56	0.681278	1.000000	-
Rv3435c	-	12	151.30	130.28	124.97	144.22	165.25	176.86	0.930092	1.000000	-
Rv3436c	glmS	30	0.00	0.00	0.73	0.14	0.00	0.00	0.130899	1.000000	-
Rv3437	-	9	327.46	293.96	318.38	312.65	314.95	297.57	0.999589	1.000000	-
Rv3438	-	12	168.23	127.39	152.94	129.72	142.16	141.63	0.954720	1.000000	-
Rv3439c	-	10	297.63	319.94	316.77	317.22	359.70	304.70	0.980247	1.000000	-
Rv3440c	-	8	609.24	491.25	590.70	588.70	506.87	458.49	0.868536	1.000000	-
Rv3441c	mrsA	15	19.90	9.99	33.38	17.13	21.05	13.97	0.901316	1.000000	-
Rv3442c	rpsI	7	0.00	0.71	0.90	1.92	0.00	0.00	0.434344	1.000000	-
Rv3443c	rplM	7	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv3444c	esxT	4	244.13	154.45	201.56	225.51	212.93	272.51	0.611095	1.000000	-
Rv3445c	esxU	4	176.36	170.19	194.39	196.00	181.63	199.12	0.993914	1.000000	-
Rv3446c	-	15	181.81	165.18	171.27	168.20	177.38	148.90	0.884724	1.000000	-
Rv3447c	-	46	109.15	109.38	96.87	106.80	93.37	108.56	0.952591	1.000000	-
Rv3448	-	26	93.29	74.60	94.75	90.30	70.50	84.08	0.492974	1.000000	-
Rv3449	mycP4	21	156.68	150.62	171.74	142.28	170.82	133.59	0.924726	1.000000	-
Rv3450c	-	15	327.41	312.01	320.24	309.34	305.87	269.54	0.977037	1.000000	-
Rv3451	cut3	15	316.72	269.20	327.05	323.36	284.91	287.18	0.942725	1.000000	-
Rv3452	cut4	7	377.60	372.83	410.09	408.98	320.42	400.73	0.976654	1.000000	-
Rv3453	-	11	200.71	203.97	144.04	175.27	171.98	141.26	0.507205	1.000000	-
Rv3454	-	28	10.47	11.82	13.87	14.57	16.89	15.41	0.488067	1.000000	-
Rv3455c	truA	12	37.89	37.64	35.70	35.81	18.80	32.32	0.453849	1.000000	-
Rv3456c	rplQ	8	0.00	0.63	0.00	0.00	0.00	0.00	0.308863	1.000000	-
Rv3457c	rpoA	13	0.30	0.00	0.00	0.71	0.90	0.00	0.394710	1.000000	-
Rv3458c	rpsD	13	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv3459c	rpsK	2	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv3460c	rpsM	10	2.23	2.51	0.00	2.81	5.24	4.06	0.424585	1.000000	-
Rv3461c	rpmJ	2	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv3462c	infA	5	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv3463	-	18	89.01	102.61	102.78	87.93	91.13	85.32	0.840154	1.000000	-
Rv3464	rmlB	23	0.00	0.66	0.00	0.00	0.00	0.61	0.249974	1.000000	-
Rv3465	rmlC	8	0.48	0.00	0.00	0.00	0.00	0.00	0.606721	1.000000	-
Rv3466	-	10	198.76	166.09	211.65	170.75	171.06	198.47	0.958086	1.000000	-
Rv3467	-	14	195.17	193.25	217.21	195.85	186.74	202.25	0.993048	1.000000	-
Rv3468c	-	18	123.72	108.65	124.23	109.93	103.53	125.52	0.906765	1.000000	-
Rv3469c	mhpE	12	125.75	109.15	93.52	104.86	109.33	101.19	0.895784	1.000000	-
Rv3470c	ilvB2	19	109.82	80.05	105.83	84.98	96.50	113.85	0.376690	1.000000	-
Rv3471c	-	6	131.10	134.42	135.44	123.02	142.99	131.61	0.999384	1.000000	-
Rv3472	-	11	169.86	148.76	181.48	195.03	184.79	181.89	0.940969	1.000000	-
Rv3473c	bpoA	9	158.48	205.54	156.11	160.18	171.58	182.18	0.617094	1.000000	-
Rv3474	-	4	194.68	213.03	195.26	243.70	247.94	167.89	0.774050	1.000000	-
Rv3475	-	26	281.44	294.73	315.01	306.74	285.57	292.44	0.974937	1.000000	-
Rv3476c	kgtP	38	88.84	88.55	91.58	87.56	82.82	97.04	0.978868	1.000000	-
Rv3477	PE31	5	63.58	74.62	37.51	39.56	27.97	58.32	0.000071	0.002182	-
Rv3478	PPE60	18	57.33	47.84	38.20	24.46	20.15	39.95	0.038482	0.515243	-
Rv3479	-	39	122.82	102.77	115.04	109.25	107.60	113.43	0.902325	1.000000	-
Rv3480c	-	30	93.30	113.99	112.02	115.37	123.16	110.60	0.782724	1.000000	-
Rv3481c	-	10	121.44	117.75	105.98	134.21	113.62	125.43	0.973587	1.000000	-
Rv3482c	-	10	125.45	120.64	89.97	121.80	128.42	140.06	0.766559	1.000000	-
Rv3483c	-	10	447.20	389.56	407.05	423.38	405.06	409.05	0.985467	1.000000	-
Rv3484	cpsA	27	172.55	177.02	162.36	186.14	190.64	176.38	0.971733	1.000000	-
Rv3485c	-	10	162.26	212.69	212.81	190.89	213.88	217.52	0.883915	1.000000	-
Rv3486	-	6	123.56	119.91	87.92	121.98	120.60	116.23	0.967162	1.000000	-
Rv3487c	lipF	14	380.14	404.67	396.63	405.48	404.07	404.11	0.998986	1.000000	-
Rv3488	-	5	184.12	146.72	199.33	131.78	129.90	120.92	0.953306	1.000000	-
Rv3489	-	3	71.94	72.97	50.08	54.59	41.78	69.70	0.762715	1.000000	-
Rv3490	otsA	30	60.80	95.12	37.91	77.74	77.00	86.66	0.000001	0.000059	-
Rv3491	-	11	209.49	222.50	182.62	250.71	247.92	216.29	0.961815	1.000000	-
Rv3492c	-	10	106.90	108.82	88.43	184.53	192.13	107.61	0.024035	0.360378	-
Rv3493c	-	13	90.61	111.67	102.25	203.20	168.38	105.18	0.014307	0.241886	-
Rv3494c	mce4F	25	188.03	211.18	178.50	343.20	352.66	218.89	0.000348	0.009325	-
Rv3495c	lprN	13	61.60	96.18	67.71	153.04	178.99	104.52	0.000055	0.001749	-
Rv3496c	mce4D	26	136.80	195.09	160.41	321.20	318.02	172.54	0.000000	0.000000	-
Rv3497c	mce4C	18	69.92	99.24	72.39	178.33	188.93	110.79	0.000001	0.000031	-
Rv3498c	mce4B	12	89.58	141.31	127.32	276.18	219.66	149.50	0.128046	1.000000	-
Rv3499c	mce4A	31	105.75	176.73	128.36	248.63	246.46	141.24	0.000000	0.000000	-
Rv3500c	yrbE4B	22	82.59	114.76	94.72	177.52	191.92	118.86	0.035319	0.484269	-
Rv3501c	yrbE4A	10	98.51	119.73	90.26	209.76	208.61	107.46	0.036881	0.498833	-
Rv3502c	fabG	11	262.91	172.50	249.87	329.37	292.28	126.77	0.064336	0.773189	-
Rv3503c	fdxD	2	17.90	10.20	14.05	18.72	25.70	27.30	0.606213	1.000000	-
Rv3504	fadE26	20	195.44	196.49	180.67	188.54	185.09	193.10	0.999586	1.000000	-
Rv3505	fadE27	12	123.93	103.37	140.93	103.15	121.38	124.95	0.859506	1.000000	-
Rv3506	fadD17	25	167.29	151.27	172.40	135.70	131.41	152.53	0.696662	1.000000	-
Rv3507	PE_PGRS53	41	157.48	153.04	160.54	141.84	145.05	123.64	0.820457	1.000000	-
Rv3508	PE_PGRS54	37	169.21	145.72	187.13	169.09	179.23	153.97	0.896399	1.000000	-
Rv3509c	ilvX	22	325.89	328.45	343.14	302.71	315.03	314.39	0.982954	1.000000	-
Rv3510c	-	16	127.26	131.81	132.34	132.15	112.22	144.52	0.961726	1.000000	-
Rv3511	PE_PGRS55	24	376.37	330.00	384.63	350.13	311.23	309.76	0.828055	1.000000	-
Rv3512	PE_PGRS56	27	183.38	163.13	177.65	159.47	154.75	143.30	0.790033	1.000000	-
Rv3513c	fadD18	16	394.36	357.81	338.54	388.81	378.86	391.79	0.986155	1.000000	-
Rv3514	PE_PGRS57	33	203.93	162.10	206.83	199.97	189.44	155.09	0.707156	1.000000	-
Rv3515c	fadD19	30	136.25	130.44	134.81	139.40	140.57	147.41	0.989646	1.000000	-
Rv3516	echA19	7	52.94	77.68	87.18	62.25	68.19	63.68	0.467719	1.000000	-
Rv3517	-	15	218.12	159.25	222.23	199.46	192.75	163.29	0.967408	1.000000	-
Rv3518c	cyp142	13	78.76	66.34	82.09	82.44	70.14	85.99	0.992625	1.000000	-
Rv3519	-	11	175.13	169.32	194.24	192.27	194.77	202.40	0.962665	1.000000	-
Rv3520c	-	16	265.09	245.74	238.06	261.23	292.49	266.63	0.956768	1.000000	-
Rv3521	-	15	246.49	235.62	253.51	244.63	243.37	217.01	0.961397	1.000000	-
Rv3522	ltp4	18	161.93	154.60	166.14	158.90	147.40	121.10	0.798475	1.000000	-
Rv3523	ltp3	18	146.44	159.62	157.65	161.11	142.05	151.54	0.986053	1.000000	-
Rv3524	-	20	134.06	124.95	128.58	125.82	122.11	132.95	0.999302	1.000000	-
Rv3525c	-	8	208.63	173.31	188.82	222.08	229.63	249.85	0.910707	1.000000	-
Rv3526	-	22	83.84	73.35	93.24	83.89	81.13	61.64	0.541511	1.000000	-
Rv3527	-	6	75.58	97.63	105.24	100.81	93.27	86.43	0.934972	1.000000	-
Rv3528c	-	36	4.54	7.49	9.48	8.97	9.65	7.55	0.435329	1.000000	-
Rv3529c	-	26	56.92	42.54	52.34	47.54	52.67	48.31	0.757612	1.000000	-
Rv3530c	-	17	55.99	51.66	57.14	70.42	58.11	61.36	0.926233	1.000000	-
Rv3531c	-	24	122.20	152.29	128.51	134.02	124.78	139.72	0.700999	1.000000	-
Rv3532	PPE61	21	226.30	216.18	211.15	207.28	200.68	225.66	0.994576	1.000000	-
Rv3533c	PPE62	20	102.45	104.76	97.84	100.64	97.97	116.44	0.974976	1.000000	-
Rv3534c	-	10	148.74	162.46	158.62	150.67	168.58	152.42	0.998584	1.000000	-
Rv3535c	-	12	214.37	277.75	237.33	220.48	286.60	259.08	0.444952	1.000000	-
Rv3536c	-	8	26.95	29.88	27.66	25.02	43.43	55.98	0.103320	1.000000	-
Rv3537	-	37	49.14	53.54	58.20	70.31	64.70	50.05	0.518859	1.000000	-
Rv3538	-	13	39.29	33.24	38.24	39.87	39.14	30.47	0.969388	1.000000	-
Rv3539	PPE63	30	116.89	86.60	106.95	109.11	95.46	92.21	0.362256	1.000000	-
Rv3540c	ltp2	18	54.64	11.24	56.78	15.36	21.61	11.71	0.000000	0.000000	-
Rv3541c	-	7	22.72	4.31	34.31	10.13	9.81	4.33	0.006229	0.121229	-
Rv3542c	-	14	72.02	12.30	66.56	21.86	31.79	14.71	0.000000	0.000000	-
Rv3543c	fadE29	17	30.75	6.54	35.63	14.93	10.77	1.55	0.000000	0.000000	-
Rv3544c	fadE28	16	103.35	19.63	98.04	39.04	41.51	16.20	0.000000	0.000000	-
Rv3545c	cyp125	24	105.31	111.02	127.86	109.30	109.78	98.45	0.886430	1.000000	-
Rv3546	fadA5	5	140.49	110.23	114.35	164.34	152.47	110.47	0.723164	1.000000	-
Rv3547	-	12	226.18	235.48	224.51	215.14	218.37	255.40	0.904559	1.000000	-
Rv3548c	-	8	240.60	230.78	226.07	228.28	198.75	214.91	0.990550	1.000000	-
Rv3549c	-	11	116.02	78.69	116.13	64.50	77.13	48.80	0.305670	1.000000	-
Rv3550	echA20	5	69.91	35.75	74.57	53.00	59.74	30.80	0.038738	0.516939	-
Rv3551	-	16	110.86	24.12	124.92	47.01	49.02	20.82	0.000000	0.000000	-
Rv3552	-	10	16.79	12.17	13.76	8.39	9.11	7.62	0.464406	1.000000	-
Rv3553	-	9	123.60	90.02	118.97	83.05	83.20	69.67	0.315060	1.000000	-
Rv3554	fdxB	30	170.93	159.57	168.31	162.93	145.75	149.58	0.913186	1.000000	-
Rv3555c	-	12	140.89	101.89	131.95	124.07	118.66	82.42	0.693963	1.000000	-
Rv3556c	fadA6	16	115.54	104.97	127.88	103.50	104.28	102.57	0.971861	1.000000	-
Rv3557c	-	16	162.23	182.72	167.80	152.22	162.20	131.61	0.832313	1.000000	-
Rv3558	PPE64	17	82.04	89.46	94.28	113.67	92.84	101.91	0.823278	1.000000	-
Rv3559c	-	8	66.58	22.24	64.87	49.39	40.03	35.45	0.231155	1.000000	-
Rv3560c	fadE30	13	140.71	96.51	121.18	132.09	125.89	106.54	0.628382	1.000000	-
Rv3561	fadD3	14	169.90	179.33	176.75	158.66	183.53	160.10	0.967705	1.000000	-
Rv3562	fadE31	12	65.03	37.79	51.52	55.90	37.82	26.98	0.276867	1.000000	-
Rv3563	fadE32	11	155.32	130.79	170.42	148.53	147.21	121.21	0.491304	1.000000	-
Rv3564	fadE33	11	204.01	159.89	235.01	160.68	182.53	111.29	0.430720	1.000000	-
Rv3565	aspB	18	27.42	39.33	43.40	30.40	39.91	25.55	0.416677	1.000000	-
Rv3566c	nat	15	118.46	79.39	84.92	90.27	99.06	90.82	0.841213	1.000000	-
Rv3566A	-	3	45.95	40.65	45.88	69.22	28.55	35.08	0.511591	1.000000	-
Rv3567c	-	8	101.51	116.26	109.90	102.80	114.61	118.66	0.974639	1.000000	-
Rv3568c	bphC	15	52.83	44.03	45.70	79.34	69.01	30.09	0.021174	0.327458	-
Rv3569c	bphD	14	98.00	65.01	93.40	66.13	83.02	63.26	0.080399	0.908756	-
Rv3570c	-	18	97.58	78.54	101.35	145.29	143.45	74.92	0.026038	0.376412	-
Rv3571	hmp	12	160.80	154.91	203.97	161.28	170.07	97.78	0.031922	0.450073	-
Rv3572	-	8	136.98	163.74	132.11	151.56	183.24	143.47	0.767110	1.000000	-
Rv3573c	fadE34	24	131.99	140.70	150.03	133.71	134.59	125.94	0.993570	1.000000	-
Rv3574	-	13	180.99	147.64	174.86	104.59	104.20	149.34	0.039670	0.525864	-
Rv3575c	-	18	99.65	105.54	98.80	132.66	127.35	127.82	0.603651	1.000000	-
Rv3576	lppH	13	109.75	115.80	123.20	127.93	105.64	96.91	0.876151	1.000000	-
Rv3577	-	14	109.45	100.52	102.29	121.04	95.29	127.36	0.931145	1.000000	-
Rv3578	arsB2	15	333.68	244.71	270.01	276.90	264.52	266.23	0.438866	1.000000	-
Rv3579c	-	12	0.46	2.10	1.57	4.67	1.81	2.14	0.185560	1.000000	-
Rv3580c	cysS	27	0.00	0.00	0.23	0.00	0.00	0.00	0.306994	1.000000	-
Rv3581c	ispF	5	0.00	2.04	0.00	1.85	0.00	1.08	0.338915	1.000000	-
Rv3582c	ispD	13	0.00	0.00	0.00	0.00	0.35	0.36	0.415755	1.000000	-
Rv3583c	-	8	1.45	2.52	3.51	2.91	3.84	4.48	0.937489	1.000000	-
Rv3584	lpqE	6	139.12	176.73	129.24	136.42	129.06	152.76	0.926954	1.000000	-
Rv3585	radA	21	270.24	260.24	275.28	252.08	275.08	252.91	0.997955	1.000000	-
Rv3586	-	14	51.78	62.20	49.77	59.79	51.04	56.01	0.912540	1.000000	-
Rv3587c	-	14	0.28	0.00	0.00	0.00	0.00	0.00	0.603065	1.000000	-
Rv3588c	-	8	0.48	0.00	1.57	1.85	0.56	0.00	0.796638	1.000000	-
Rv3589	mutY	15	157.35	159.33	171.22	167.77	172.34	131.30	0.955723	1.000000	-
Rv3590c	PE_PGRS58	21	158.79	163.80	183.96	174.54	178.32	171.78	0.940990	1.000000	-
Rv3591c	-	16	114.20	115.33	104.22	115.11	122.33	97.48	0.863805	1.000000	-
Rv3592	TB11.2	2	198.66	265.17	181.52	193.00	214.30	260.94	0.667598	1.000000	-
Rv3593	lpqF	19	43.59	79.59	44.52	63.00	98.55	73.05	0.000021	0.000717	-
Rv3594	-	15	240.49	245.22	251.82	248.75	239.76	272.47	0.983912	1.000000	-
Rv3595c	PE_PGRS59	15	173.76	202.04	179.80	191.84	176.68	184.83	0.975868	1.000000	-
Rv3596c	clpC1	29	0.00	0.18	0.00	1.29	0.00	0.00	0.071354	0.830031	-
Rv3597c	lsr2	5	4.47	10.10	4.36	9.65	9.04	7.44	0.742248	1.000000	-
Rv3598c	lysS	31	0.00	0.16	0.00	0.00	0.00	0.00	0.306894	1.000000	-
Rv3599c	-	1	0.00	0.00	37.85	0.00	0.00	0.00	1.000000	1.000000	TA sites <= 1
Rv3600c	-	13	213.15	238.74	211.29	216.84	208.71	236.55	0.990597	1.000000	-
Rv3601c	panD	9	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv3602c	panC	13	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv3603c	-	13	199.17	203.07	166.17	193.15	207.51	199.87	0.987724	1.000000	-
Rv3604c	-	14	121.47	190.83	125.50	88.39	136.34	122.62	0.010472	0.190798	-
Rv3605c	-	6	247.89	181.14	209.50	219.67	249.88	241.29	0.917405	1.000000	-
Rv3606c	folK	8	37.79	37.08	39.57	34.14	40.03	37.73	0.999749	1.000000	-
Rv3607c	folB	7	9.87	7.29	10.74	9.81	7.99	7.03	0.990391	1.000000	-
Rv3608c	folP1	9	6.90	20.34	8.67	16.02	19.74	8.40	0.818921	1.000000	-
Rv3609c	folE	12	0.00	0.42	0.00	0.00	0.00	0.00	0.307973	1.000000	-
Rv3610c	ftsH	34	95.10	83.95	90.34	87.35	100.88	86.60	0.950901	1.000000	-
Rv3611	-	2	125.82	203.95	117.60	123.32	204.90	186.16	0.033329	0.463360	-
Rv3612c	-	4	142.16	229.38	119.17	131.95	192.68	211.13	0.002117	0.047178	-
Rv3613c	-	0	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	TA sites <= 1
Rv3614c	-	8	170.80	198.80	172.03	148.88	158.74	200.70	0.925470	1.000000	-
Rv3615c	-	11	168.58	181.89	157.82	166.21	151.74	144.66	0.993880	1.000000	-
Rv3616c	-	18	183.45	174.86	192.06	164.36	169.82	141.93	0.996120	1.000000	-
Rv3617	ephA	19	251.69	258.74	254.39	270.87	279.51	273.31	0.980326	1.000000	-
Rv3618	-	22	115.16	165.41	134.24	131.89	152.42	151.29	0.340433	1.000000	-
Rv3619c	esxV	4	466.41	421.12	385.51	402.80	457.74	439.79	0.967904	1.000000	-
Rv3620c	esxW	4	184.73	180.96	195.28	180.05	208.68	208.33	0.982419	1.000000	-
Rv3621c	PPE65	14	246.13	215.16	234.33	214.21	226.09	239.96	0.996410	1.000000	-
Rv3622c	PE32	4	127.51	156.30	204.72	164.40	170.58	157.37	0.938331	1.000000	-
Rv3623	lpqG	6	224.68	204.21	187.24	200.43	211.80	213.03	0.995909	1.000000	-
Rv3624c	hpt	11	22.33	15.78	29.56	17.43	16.08	17.14	0.979448	1.000000	-
Rv3625c	mesJ	9	0.00	1.13	0.00	0.00	0.00	0.52	0.103595	1.000000	-
Rv3626c	-	11	54.26	53.70	44.74	48.54	54.79	68.32	0.877752	1.000000	-
Rv3627c	-	14	25.95	61.07	31.70	34.43	60.28	29.92	0.021066	0.327053	-
Rv3628	ppa	10	28.98	26.13	14.96	24.33	28.60	38.29	0.977481	1.000000	-
Rv3629c	-	17	251.61	255.85	242.61	254.63	234.28	254.95	0.996044	1.000000	-
Rv3630	-	24	150.65	143.09	141.01	154.87	204.16	109.89	0.034099	0.470783	-
Rv3631	-	6	38.43	38.92	27.62	29.83	30.68	48.08	0.892287	1.000000	-
Rv3632	-	7	464.47	499.34	435.42	497.71	491.73	479.36	0.995653	1.000000	-
Rv3633	-	18	164.85	115.71	131.60	147.76	126.93	132.24	0.887279	1.000000	-
Rv3634c	galE1	20	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv3635	-	26	30.58	47.01	30.99	20.58	39.52	25.36	0.013936	0.236621	-
Rv3636	-	6	114.87	117.06	115.19	110.98	97.13	122.30	0.990647	1.000000	-
Rv3637	-	5	78.84	69.48	109.67	81.75	107.91	104.05	0.848114	1.000000	-
Rv3638	-	13	76.44	83.28	98.82	81.67	90.28	94.75	0.864662	1.000000	-
Rv3639c	-	9	140.96	92.49	167.06	139.35	107.47	119.53	0.820861	1.000000	-
Rv3640c	-	17	152.64	128.80	149.20	141.42	136.20	143.39	0.952052	1.000000	-
Rv3641c	fic	10	177.39	168.54	157.65	154.68	183.05	181.22	0.820329	1.000000	-
Rv3642c	-	2	127.11	84.20	118.70	113.85	77.18	125.93	0.933093	1.000000	-
Rv3643	-	8	82.13	78.81	88.25	97.29	91.45	88.88	0.989581	1.000000	-
Rv3644c	-	16	22.72	11.10	9.00	2.97	3.78	9.88	0.455481	1.000000	-
Rv3645	-	25	73.87	34.64	110.98	7.21	7.52	21.15	0.000000	0.000000	-
Rv3646c	topA	52	1.07	2.05	0.54	1.54	1.27	0.78	0.862615	1.000000	-
Rv3647c	-	9	99.32	98.46	85.83	99.15	108.11	109.05	0.995895	1.000000	-
Rv3648c	cspA	4	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv3649	-	33	109.45	114.85	103.01	120.65	99.62	88.83	0.734242	1.000000	-
Rv3650	PE33	3	74.78	79.23	48.95	79.89	35.47	46.79	0.256677	1.000000	-
Rv3651	-	14	99.58	78.12	102.50	86.12	79.00	81.27	0.799599	1.000000	-
Rv3652	PE_PGRS60	6	393.25	378.65	375.61	421.61	334.74	336.38	0.964117	1.000000	-
Rv3653	PE_PGRS61	5	131.89	154.60	178.93	118.28	165.21	166.68	0.646131	1.000000	-
Rv3654c	-	1	58.20	0.00	150.85	0.00	0.00	0.00	1.000000	1.000000	TA sites <= 1
Rv3655c	-	6	229.12	204.87	229.68	220.56	199.99	199.34	0.999187	1.000000	-
Rv3656c	-	5	244.55	207.85	285.57	329.06	291.93	249.21	0.654175	1.000000	-
Rv3657c	-	8	56.19	94.08	82.24	87.27	103.16	90.07	0.552417	1.000000	-
Rv3658c	-	10	161.32	200.16	161.48	186.79	226.50	186.27	0.678915	1.000000	-
Rv3659c	-	6	311.09	312.07	319.34	311.44	245.09	252.07	0.948666	1.000000	-
Rv3660c	-	9	36.17	41.42	39.96	40.99	34.49	57.66	0.641900	1.000000	-
Rv3661	-	16	157.07	154.42	160.12	163.07	177.38	159.39	0.994176	1.000000	-
Rv3662c	-	4	157.57	129.90	181.77	13.01	32.48	126.87	0.000001	0.000027	-
Rv3663c	dppD	25	134.74	118.87	101.35	79.51	78.97	97.71	0.016868	0.271383	-
Rv3664c	dppC	14	117.46	113.34	97.53	78.07	67.74	110.95	0.400942	1.000000	-
Rv3665c	dppB	17	134.92	95.82	121.05	77.14	77.17	111.10	0.020078	0.314155	-
Rv3666c	dppA	23	79.85	90.29	86.00	60.62	56.74	75.01	0.304744	1.000000	-
Rv3667	acs	39	76.33	100.63	71.53	123.15	120.90	95.88	0.000914	0.022241	-
Rv3668c	-	9	176.14	199.68	190.78	185.95	225.87	177.05	0.987385	1.000000	-
Rv3669	-	4	20.59	31.90	15.62	18.69	30.23	36.10	0.931872	1.000000	-
Rv3670	ephE	16	4.97	14.26	28.49	18.68	33.42	3.83	0.000006	0.000232	-
Rv3671c	-	15	30.91	32.53	16.71	17.86	30.14	20.40	0.415173	1.000000	-
Rv3672c	-	10	107.09	93.44	104.72	115.69	128.25	137.21	0.874924	1.000000	-
Rv3673c	-	7	13.46	16.71	17.45	1.37	3.11	11.47	0.003986	0.081559	-
Rv3674c	nth	11	211.40	207.27	183.36	228.16	241.82	210.99	0.914472	1.000000	-
Rv3675	-	6	131.17	140.62	137.65	120.00	135.07	136.81	0.999068	1.000000	-
Rv3676	-	2	48.04	10.07	54.77	0.00	9.50	15.18	0.000005	0.000199	-
Rv3677c	-	11	88.58	103.52	105.82	89.10	93.97	96.31	0.977857	1.000000	-
Rv3678c	-	8	232.54	209.37	246.57	217.16	185.66	185.35	0.894846	1.000000	-
Rv3678A	-	2	68.45	101.65	57.65	63.67	68.95	69.13	0.245681	1.000000	-
Rv3679	-	15	210.51	223.89	209.35	192.93	208.06	214.30	0.995488	1.000000	-
Rv3680	-	20	143.78	143.22	109.02	122.36	121.04	156.22	0.267011	1.000000	-
Rv3681c	whiB4	7	144.85	153.46	164.27	144.10	161.66	169.37	0.977928	1.000000	-
Rv3682	ponA2	37	90.50	158.94	92.53	141.52	195.64	113.35	0.000000	0.000000	-
Rv3683	-	11	153.05	164.38	154.38	129.59	153.60	163.06	0.989405	1.000000	-
Rv3684	-	18	141.25	165.81	164.50	144.80	164.75	133.59	0.929859	1.000000	-
Rv3685c	cyp137	19	214.66	222.27	198.89	214.05	205.23	172.24	0.955910	1.000000	-
Rv3686c	-	6	261.22	231.80	204.34	213.13	243.71	220.58	0.959856	1.000000	-
Rv3687c	rsfB	5	16.65	16.40	26.27	19.67	16.97	24.60	0.804807	1.000000	-
Rv3688c	-	7	280.92	239.90	223.34	259.22	227.16	263.92	0.959736	1.000000	-
Rv3689	-	33	140.83	146.15	159.85	164.51	166.27	162.65	0.833245	1.000000	-
Rv3690	-	11	92.11	111.57	113.40	90.15	111.79	127.41	0.683807	1.000000	-
Rv3691	-	15	171.97	161.54	181.40	189.57	187.19	150.00	0.855218	1.000000	-
Rv3692	moxR2	15	153.40	122.51	151.66	166.21	157.09	157.63	0.827260	1.000000	-
Rv3693	-	16	148.54	131.36	148.39	137.40	115.81	125.29	0.914472	1.000000	-
Rv3694c	-	15	124.25	124.56	119.63	109.78	131.46	127.45	0.995833	1.000000	-
Rv3695	-	10	176.45	155.69	136.77	198.42	165.02	142.22	0.924028	1.000000	-
Rv3696c	glpK	29	39.92	56.74	40.04	28.27	31.60	47.38	0.012631	0.219114	-
Rv3697c	-	9	171.71	184.96	133.42	165.56	171.68	155.79	0.837443	1.000000	-
Rv3698	-	35	89.78	81.19	95.97	85.35	100.09	91.17	0.950133	1.000000	-
Rv3699	-	13	159.39	133.03	139.66	149.23	139.29	146.83	0.986200	1.000000	-
Rv3700c	-	13	176.24	171.21	156.03	182.16	150.01	145.70	0.926252	1.000000	-
Rv3701c	-	15	37.72	35.39	59.29	46.65	46.03	41.19	0.718139	1.000000	-
Rv3702c	-	8	110.50	74.57	147.94	76.04	119.33	92.86	0.082603	0.920631	-
Rv3703c	-	18	192.43	188.87	212.41	195.19	173.58	187.15	0.995896	1.000000	-
Rv3704c	gshA	14	280.39	225.76	260.93	249.92	236.83	241.18	0.977580	1.000000	-
Rv3705c	-	9	157.97	133.66	135.29	127.83	130.17	157.20	0.947836	1.000000	-
Rv3705A	-	4	159.39	199.31	188.97	187.21	174.64	186.81	0.984596	1.000000	-
Rv3706c	-	3	26.83	18.58	8.40	26.81	38.53	33.50	0.026538	0.382269	-
Rv3707c	-	15	230.96	179.50	182.22	207.55	191.10	199.05	0.844359	1.000000	-
Rv3708c	asd	10	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv3709c	ask	14	7.02	9.84	11.63	17.41	7.99	5.89	0.856471	1.000000	-
Rv3710	leuA	29	265.90	242.56	254.58	236.77	231.70	245.17	0.969868	1.000000	-
Rv3711c	dnaQ	15	132.62	129.78	115.27	139.92	150.03	154.38	0.810404	1.000000	-
Rv3712	-	11	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv3713	cobQ2	10	0.00	1.02	2.18	2.80	1.18	2.02	0.410584	1.000000	-
Rv3714c	-	12	230.02	227.91	237.98	202.61	205.85	217.73	0.971294	1.000000	-
Rv3715c	recR	4	183.17	157.56	163.03	149.19	168.09	162.59	0.989083	1.000000	-
Rv3716c	-	4	147.29	108.62	112.71	157.13	127.83	85.22	0.602911	1.000000	-
Rv3717	-	12	213.04	187.51	191.11	209.02	223.06	173.63	0.919908	1.000000	-
Rv3718c	-	5	83.93	68.58	72.62	128.90	116.23	94.00	0.036090	0.493146	-
Rv3719	-	39	179.10	152.47	183.99	148.99	147.75	162.22	0.480381	1.000000	-
Rv3720	-	32	186.33	192.31	215.12	161.99	158.55	187.13	0.180234	1.000000	-
Rv3721c	dnaZX	26	0.30	0.40	0.00	0.19	0.35	0.18	0.938422	1.000000	-
Rv3722c	-	31	45.49	27.22	31.87	28.56	23.08	25.26	0.905168	1.000000	-
Rv3723	-	9	116.21	215.37	138.00	314.67	305.42	169.31	0.000000	0.000011	-
Rv3724A	cut5a	3	70.64	116.85	123.10	99.87	82.37	131.22	0.935209	1.000000	-
Rv3724B	cut5b	18	179.63	191.73	171.94	203.99	167.56	182.82	0.934825	1.000000	-
Rv3725	-	13	259.16	274.18	245.09	280.49	287.28	321.37	0.714666	1.000000	-
Rv3726	-	16	155.21	123.19	136.87	166.73	155.45	140.48	0.544904	1.000000	-
Rv3727	-	38	176.21	197.95	172.22	183.64	187.54	192.06	0.867338	1.000000	-
Rv3728	-	32	278.22	250.46	276.38	254.08	232.39	248.70	0.872748	1.000000	-
Rv3729	-	29	215.02	224.44	215.47	219.30	209.37	220.15	0.999246	1.000000	-
Rv3730c	-	21	207.30	216.28	239.54	200.41	198.45	208.01	0.920696	1.000000	-
Rv3731	ligC	18	130.98	133.43	131.44	131.85	125.86	144.05	0.998215	1.000000	-
Rv3732	-	16	222.91	191.59	212.86	219.64	214.60	216.87	0.990295	1.000000	-
Rv3733c	-	4	353.98	346.62	405.27	332.01	313.82	269.17	0.981088	1.000000	-
Rv3734c	-	18	192.87	252.89	193.61	191.60	211.27	218.80	0.643300	1.000000	-
Rv3735	-	6	225.18	264.48	268.27	208.52	243.96	264.48	0.937743	1.000000	-
Rv3736	-	23	180.18	190.62	179.53	183.72	192.54	218.72	0.849988	1.000000	-
Rv3737	-	17	182.40	197.54	208.47	169.13	188.65	151.66	0.905058	1.000000	-
Rv3738c	PPE66	19	288.07	297.21	306.06	275.69	270.92	246.89	0.982854	1.000000	-
Rv3739c	PPE67	7	234.89	230.31	210.72	262.12	251.52	267.12	0.975477	1.000000	-
Rv3740c	-	20	369.85	319.44	342.98	333.60	331.29	327.73	0.969783	1.000000	-
Rv3741c	-	9	270.53	261.67	250.98	243.95	246.06	213.35	0.975196	1.000000	-
Rv3742c	-	6	317.46	264.86	294.18	290.52	238.36	251.23	0.856426	1.000000	-
Rv3743c	ctpJ	31	175.87	165.94	175.26	165.14	161.23	154.03	0.990394	1.000000	-
Rv3744	-	7	320.61	303.09	259.94	257.89	278.97	286.90	0.964377	1.000000	-
Rv3745c	-	2	373.55	410.87	566.03	409.13	367.75	417.27	0.974619	1.000000	-
Rv3746c	PE34	5	218.38	237.18	208.40	226.51	231.49	219.59	0.999762	1.000000	-
Rv3747	-	7	174.82	127.51	144.83	158.03	167.98	158.19	0.994637	1.000000	-
Rv3748	-	6	113.83	98.20	111.65	78.81	91.38	97.01	0.968882	1.000000	-
Rv3749c	-	12	154.75	165.31	160.96	144.88	143.87	176.83	0.966968	1.000000	-
Rv3750c	-	5	134.08	137.87	106.46	121.33	106.84	159.67	0.535437	1.000000	-
Rv3751	-	1	349.62	345.80	418.64	390.54	324.10	339.36	1.000000	1.000000	TA sites <= 1
Rv3752c	-	2	7.40	12.80	3.15	2.17	3.63	5.05	0.628418	1.000000	-
Rv3753c	-	5	13.64	21.53	15.02	23.92	25.43	12.94	0.810940	1.000000	-
Rv3754	tyrA	14	11.26	22.73	15.00	10.64	10.95	7.24	0.893047	1.000000	-
Rv3755c	-	12	201.69	201.87	182.60	120.60	142.86	151.71	0.137791	1.000000	-
Rv3756c	proZ	16	195.64	195.36	189.13	168.68	178.81	188.49	0.896063	1.000000	-
Rv3757c	proW	13	234.34	266.57	241.82	241.96	233.12	222.62	0.998198	1.000000	-
Rv3758c	proV	17	104.47	133.41	100.84	115.28	105.68	114.41	0.910293	1.000000	-
Rv3759c	proX	13	40.73	42.35	43.81	47.79	47.61	55.78	0.945259	1.000000	-
Rv3760	-	5	219.72	192.82	212.77	183.68	181.41	180.73	0.994922	1.000000	-
Rv3761c	fadE36	16	132.83	154.94	149.96	126.58	142.64	148.53	0.961469	1.000000	-
Rv3762c	-	29	183.15	152.38	191.06	165.87	149.91	159.24	0.697496	1.000000	-
Rv3763	lpqH	8	27.86	30.61	23.08	29.21	22.23	29.71	0.981371	1.000000	-
Rv3764c	-	16	0.00	0.00	0.00	0.00	0.56	0.00	0.032186	0.452194	-
Rv3765c	-	13	150.60	138.18	130.58	134.05	135.41	148.11	0.909285	1.000000	-
Rv3766	-	15	172.79	134.94	191.72	166.40	145.83	155.10	0.355436	1.000000	-
Rv3767c	-	16	109.03	111.86	121.33	123.50	123.70	148.71	0.882198	1.000000	-
Rv3768	-	12	151.68	155.34	160.04	180.04	157.59	164.97	0.981933	1.000000	-
Rv3769	-	1	228.64	157.05	144.55	143.00	141.65	81.05	1.000000	1.000000	TA sites <= 1
Rv3770c	-	8	337.65	322.80	306.58	360.71	295.95	298.40	0.893259	1.000000	-
Rv3770A	-	2	354.98	349.57	344.64	385.08	343.30	205.16	0.549726	1.000000	-
Rv3770B	-	3	322.97	251.30	262.66	258.80	203.90	246.29	0.830525	1.000000	-
Rv3771c	-	2	238.61	129.97	57.92	205.64	149.35	163.73	0.793558	1.000000	-
Rv3772	hisC2	18	202.43	215.54	202.75	204.61	200.84	190.95	0.998917	1.000000	-
Rv3773c	-	8	129.00	161.91	137.65	141.68	149.96	183.04	0.826733	1.000000	-
Rv3774	echA21	13	255.77	220.92	260.32	211.27	211.20	114.02	0.000579	0.014917	-
Rv3775	lipE	24	253.80	198.17	283.42	191.54	185.79	91.17	0.000000	0.000021	-
Rv3776	-	23	197.93	204.85	215.87	203.88	206.54	195.70	0.995018	1.000000	-
Rv3777	-	15	243.08	232.16	195.41	215.08	222.00	223.30	0.935020	1.000000	-
Rv3778c	-	17	8.07	23.62	9.21	7.81	18.21	9.34	0.000008	0.000285	-
Rv3779	-	47	145.63	153.18	130.82	141.80	136.19	152.09	0.913697	1.000000	-
Rv3780	-	8	31.71	55.83	29.24	34.06	37.66	43.40	0.921848	1.000000	-
Rv3781	rfbE	14	0.00	1.46	0.90	0.31	1.35	0.00	0.380902	1.000000	-
Rv3782	-	18	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv3783	rfbD	11	4.60	12.03	6.52	9.94	8.36	6.94	0.942449	1.000000	-
Rv3784	-	28	233.60	223.64	219.33	207.25	230.28	225.25	0.959788	1.000000	-
Rv3785	-	14	390.18	362.44	362.87	327.87	317.95	310.27	0.920676	1.000000	-
Rv3786c	-	23	274.55	225.31	238.19	245.24	245.35	237.31	0.956971	1.000000	-
Rv3787c	-	10	306.28	279.50	276.87	246.63	235.90	238.94	0.914500	1.000000	-
Rv3788	-	6	361.18	320.91	337.98	276.15	348.16	342.17	0.959576	1.000000	-
Rv3789	-	8	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv3790	-	27	16.45	13.84	15.76	14.62	16.61	9.65	0.994220	1.000000	-
Rv3791	-	12	0.00	0.00	0.00	0.00	0.60	0.00	0.307973	1.000000	-
Rv3792	-	33	1.53	1.70	1.89	1.26	1.91	1.56	0.996602	1.000000	-
Rv3793	embC	52	5.20	6.89	6.50	6.59	8.96	5.99	0.971471	1.000000	-
Rv3794	embA	55	2.31	3.35	2.22	2.19	3.82	2.63	0.969112	1.000000	-
Rv3795	embB	49	0.08	0.10	0.00	0.00	0.00	0.00	0.598027	1.000000	-
Rv3796	-	25	96.23	84.95	86.96	91.15	100.57	99.34	0.918839	1.000000	-
Rv3797	fadE35	25	227.55	222.93	213.95	213.87	205.85	229.43	0.978150	1.000000	-
Rv3798	-	16	255.58	245.65	240.88	238.07	220.47	241.44	0.997971	1.000000	-
Rv3799c	accD4	17	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv3800c	pks13	58	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv3801c	fadD32	24	0.00	0.22	0.26	0.18	0.60	0.00	0.641419	1.000000	-
Rv3802c	-	24	200.54	165.19	191.58	33.86	34.02	106.17	0.000000	0.000000	-
Rv3803c	fbpD	16	73.07	70.03	67.11	64.85	64.73	82.01	0.930368	1.000000	-
Rv3804c	fbpA	16	42.66	71.39	47.74	99.50	112.12	63.19	0.000000	0.000000	-
Rv3805c	-	40	0.66	1.53	0.47	0.12	0.41	0.74	0.462843	1.000000	-
Rv3806c	-	18	0.00	0.29	0.00	0.00	0.00	0.30	0.415788	1.000000	-
Rv3807c	-	4	22.98	41.81	31.25	26.93	32.91	21.25	0.862159	1.000000	-
Rv3808c	glfT	29	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv3809c	glf	34	6.99	7.76	5.26	7.40	7.70	7.08	0.999452	1.000000	-
Rv3810	pirG	13	102.51	134.01	99.91	116.89	208.78	99.54	0.225094	1.000000	-
Rv3811	-	26	182.35	209.47	195.38	190.52	199.71	178.18	0.949825	1.000000	-
Rv3812	PE_PGRS62	28	108.96	126.29	116.23	105.16	102.44	107.33	0.940154	1.000000	-
Rv3813c	-	12	176.69	146.85	164.67	163.24	195.17	161.75	0.812814	1.000000	-
Rv3814c	-	11	179.40	214.37	210.77	197.35	184.38	187.93	0.982626	1.000000	-
Rv3815c	-	14	262.92	270.09	278.42	277.82	276.06	265.42	0.999718	1.000000	-
Rv3816c	-	14	17.27	11.63	20.81	17.33	18.50	12.53	0.834772	1.000000	-
Rv3817	-	8	237.74	226.93	219.02	159.84	197.40	171.08	0.667865	1.000000	-
Rv3818	-	32	98.59	108.49	105.62	120.09	115.58	102.34	0.843976	1.000000	-
Rv3819	-	8	69.98	66.71	92.10	74.05	55.60	54.62	0.767572	1.000000	-
Rv3820c	papA2	44	132.41	123.05	132.38	121.04	115.96	146.36	0.775124	1.000000	-
Rv3821	-	18	224.80	215.29	181.12	198.83	204.90	232.01	0.809525	1.000000	-
Rv3822	-	39	74.40	80.12	84.77	69.76	75.18	87.00	0.850153	1.000000	-
Rv3823c	mmpL8	78	74.21	86.43	76.67	84.38	82.04	76.32	0.928682	1.000000	-
Rv3824c	papA1	46	156.18	125.41	147.16	117.72	120.21	136.73	0.490109	1.000000	-
Rv3825c	pks2	116	250.77	206.04	261.87	200.25	190.29	216.11	0.003750	0.077522	-
Rv3826	fadD23	50	33.12	38.13	39.73	31.01	37.88	41.71	0.594243	1.000000	-
Rv3827c	-	18	182.31	180.10	179.02	193.38	178.37	166.51	0.991075	1.000000	-
Rv3828c	-	8	145.89	121.53	147.03	142.31	134.31	118.19	0.961110	1.000000	-
Rv3829c	-	33	150.84	152.55	149.38	139.12	137.38	145.08	0.991015	1.000000	-
Rv3830c	-	10	179.68	172.18	140.96	146.06	185.06	158.78	0.791830	1.000000	-
Rv3831	-	11	317.21	273.74	284.44	267.14	247.68	253.95	0.939932	1.000000	-
Rv3832c	-	9	133.28	132.14	122.42	124.15	137.67	154.11	0.983087	1.000000	-
Rv3833	-	10	142.78	184.30	189.64	198.53	200.45	210.78	0.700879	1.000000	-
Rv3834c	serS	23	0.00	0.00	0.27	0.00	0.00	0.00	0.307130	1.000000	-
Rv3835	-	15	201.71	192.32	176.09	200.19	229.70	199.69	0.894271	1.000000	-
Rv3836	-	7	234.69	208.45	197.43	215.33	185.95	216.77	0.947234	1.000000	-
Rv3837c	-	10	261.84	204.82	205.51	210.84	229.15	205.08	0.834421	1.000000	-
Rv3838c	pheA	13	46.38	58.65	24.44	57.83	35.40	46.57	0.058690	0.720531	-
Rv3839	-	16	176.11	178.22	204.58	272.82	275.52	228.22	0.197595	1.000000	-
Rv3840	-	10	351.68	346.78	363.26	341.66	374.88	384.78	0.996738	1.000000	-
Rv3841	bfrB	9	34.13	47.42	40.78	55.68	60.55	47.63	0.942595	1.000000	-
Rv3842c	glpQ1	13	103.62	103.83	126.91	109.57	123.34	123.17	0.994738	1.000000	-
Rv3843c	-	17	26.84	22.16	19.67	27.23	34.17	18.73	0.788676	1.000000	-
Rv3844	-	3	308.72	317.20	284.42	266.13	294.20	266.96	0.995027	1.000000	-
Rv3845	-	5	236.00	234.08	229.17	282.41	178.29	205.05	0.863796	1.000000	-
Rv3846	sodA	14	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv3847	-	7	11.70	10.20	7.13	7.49	13.41	17.36	0.833100	1.000000	-
Rv3848	-	9	123.52	122.17	132.66	116.22	109.29	119.85	0.999326	1.000000	-
Rv3849	espR	9	137.98	170.65	95.65	135.75	152.15	108.96	0.348480	1.000000	-
Rv3850	-	5	230.32	247.21	224.34	157.46	185.68	205.46	0.214222	1.000000	-
Rv3851	-	2	174.81	129.72	190.69	141.80	147.90	137.01	0.865140	1.000000	-
Rv3852	hns	4	272.71	240.68	168.73	224.78	226.23	292.44	0.805293	1.000000	-
Rv3853	menG	4	149.80	83.36	95.35	105.54	114.35	117.17	0.540116	1.000000	-
Rv3854c	ethA	30	137.64	141.33	116.83	145.75	139.20	132.89	0.877820	1.000000	-
Rv3855	ethR	11	165.96	152.38	144.93	152.36	154.31	132.98	0.953638	1.000000	-
Rv3856c	-	11	143.45	135.53	107.40	126.13	133.85	120.84	0.838315	1.000000	-
Rv3857c	-	3	214.45	220.28	218.14	254.83	248.70	245.09	0.989744	1.000000	-
Rv3858c	gltD	14	13.67	8.67	16.75	16.37	9.35	5.84	0.199709	1.000000	-
Rv3859c	gltB	80	9.65	3.60	9.78	8.18	3.48	1.89	0.000000	0.000000	-
Rv3860	-	14	306.24	297.26	306.98	292.80	303.68	290.30	0.999877	1.000000	-
Rv3861	-	1	5.47	0.00	0.00	19.43	29.75	14.10	1.000000	1.000000	TA sites <= 1
Rv3862c	whiB6	7	123.72	135.19	99.21	141.38	150.54	127.27	0.954871	1.000000	-
Rv3863	-	17	38.39	58.35	42.67	63.71	67.20	66.72	0.375724	1.000000	-
Rv3864	-	18	35.81	38.67	36.57	48.59	56.05	38.51	0.769959	1.000000	-
Rv3865	-	9	57.17	82.03	41.37	48.52	60.07	63.00	0.284917	1.000000	-
Rv3866	-	12	93.56	130.75	124.25	105.76	119.27	134.78	0.640071	1.000000	-
Rv3867	-	7	227.80	191.73	203.92	197.96	195.94	203.22	0.975706	1.000000	-
Rv3868	-	31	145.54	165.04	157.17	137.99	153.30	161.65	0.657225	1.000000	-
Rv3869	-	29	238.23	223.85	219.13	233.65	246.01	216.68	0.995278	1.000000	-
Rv3870	-	38	119.05	115.30	122.73	119.60	127.37	135.80	0.962232	1.000000	-
Rv3871	-	25	168.07	179.60	179.81	176.64	176.92	162.26	0.998063	1.000000	-
Rv3872	PE35	1	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	TA sites <= 1
Rv3873	PPE68	12	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv3874	esxB	5	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv3875	esxA	4	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv3876	-	25	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv3877	-	28	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv3878	-	5	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv3879c	-	38	7.25	4.32	8.06	6.05	7.45	9.87	0.889017	1.000000	-
Rv3880c	-	4	326.57	280.62	318.38	298.82	260.28	242.65	0.970972	1.000000	-
Rv3881c	-	24	226.88	203.41	194.40	195.10	193.18	182.49	0.858478	1.000000	-
Rv3882c	-	23	257.81	244.99	250.05	222.64	229.22	214.87	0.891748	1.000000	-
Rv3883c	mycP1	17	258.43	257.43	251.17	251.82	236.46	268.69	0.998931	1.000000	-
Rv3884c	-	33	121.53	131.84	142.60	114.53	125.54	129.71	0.870879	1.000000	-
Rv3885c	-	27	122.30	103.82	154.73	109.10	127.69	106.55	0.429062	1.000000	-
Rv3886c	mycP2	27	150.08	113.48	119.98	111.10	115.37	125.84	0.341026	1.000000	-
Rv3887c	-	32	110.55	90.36	108.74	102.37	104.87	111.18	0.972388	1.000000	-
Rv3888c	-	29	21.03	26.24	25.67	29.35	21.90	24.65	0.802450	1.000000	-
Rv3889c	-	19	285.31	276.21	282.95	257.46	237.19	225.86	0.900881	1.000000	-
Rv3890c	esxC	5	344.55	347.04	323.43	335.48	334.50	345.70	0.999868	1.000000	-
Rv3891c	esxD	9	89.96	84.96	118.51	95.18	97.18	110.93	0.930606	1.000000	-
Rv3892c	PPE69	10	193.94	192.81	193.96	155.34	189.61	149.65	0.577961	1.000000	-
Rv3893c	PE36	2	749.97	652.04	635.63	743.10	597.61	506.32	0.237374	1.000000	-
Rv3894c	-	51	191.54	169.29	180.82	166.07	158.17	147.94	0.532968	1.000000	-
Rv3895c	-	13	274.94	210.45	229.76	230.24	218.31	244.86	0.881246	1.000000	-
Rv3896c	-	15	270.02	219.20	254.55	219.99	212.77	211.27	0.592458	1.000000	-
Rv3897c	-	7	191.35	202.98	234.06	185.05	196.72	217.80	0.978477	1.000000	-
Rv3898c	-	6	217.42	255.71	236.45	197.32	197.99	258.03	0.836029	1.000000	-
Rv3899c	-	18	326.42	307.81	346.14	304.08	278.61	247.01	0.954898	1.000000	-
Rv3900c	-	17	167.42	149.68	166.84	164.76	154.34	138.45	0.982420	1.000000	-
Rv3901c	-	14	416.11	377.93	398.05	400.04	341.39	370.15	0.979881	1.000000	-
Rv3902c	-	26	1.44	1.19	0.24	1.82	3.33	1.95	0.338927	1.000000	-
Rv3903c	-	51	161.29	139.26	149.30	144.95	134.94	154.42	0.948352	1.000000	-
Rv3904c	esxE	3	174.80	163.76	183.68	170.81	195.05	142.96	0.990412	1.000000	-
Rv3905c	esxF	5	323.61	259.87	279.95	303.54	279.90	333.01	0.989469	1.000000	-
Rv3906c	-	10	288.97	263.64	302.24	241.81	249.12	244.94	0.956294	1.000000	-
Rv3907c	pcnA	19	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
Rv3908	-	11	35.57	58.49	32.95	57.97	59.70	37.26	0.655826	1.000000	-
Rv3909	-	41	3.31	5.85	4.80	5.78	6.18	4.39	0.961522	1.000000	-
Rv3910	-	54	39.66	63.64	36.41	81.27	83.13	54.73	0.022167	0.338880	-
Rv3911	sigM	12	209.79	206.80	244.87	227.16	209.81	244.82	0.938316	1.000000	-
Rv3912	-	11	294.94	272.41	298.30	274.61	232.57	233.48	0.937330	1.000000	-
Rv3913	trxB2	18	12.01	13.06	20.99	16.49	18.54	7.58	0.856323	1.000000	-
Rv3914	trxC	5	6.01	15.28	6.31	1.97	3.60	11.49	0.104327	1.000000	-
Rv3915	-	24	0.16	0.21	0.26	0.20	0.00	0.20	0.965536	1.000000	-
Rv3916c	-	11	173.69	130.41	162.81	117.67	114.90	139.24	0.740428	1.000000	-
Rv3917c	parB	18	7.34	16.43	12.49	20.99	11.63	10.96	0.843805	1.000000	-
Rv3918c	parA	19	8.90	17.68	13.49	8.69	12.41	11.59	0.690358	1.000000	-
Rv3919c	gidB	13	120.70	116.98	117.30	86.05	98.57	101.92	0.604776	1.000000	-
Rv3920c	-	3	225.53	298.31	226.33	302.82	344.74	275.59	0.983550	1.000000	-
Rv3921c	-	23	0.00	0.44	0.00	0.19	0.20	0.23	0.556247	1.000000	-
Rv3922c	-	12	60.30	85.90	72.31	61.29	80.76	88.35	0.829619	1.000000	-
Rv3923c	rnpA	4	39.81	35.41	21.07	36.05	27.78	23.96	0.978133	1.000000	-
Rv3924c	rpmH	2	0.00	0.00	0.00	0.00	0.00	0.00	1.000000	1.000000	No counts in all conditions
