#Console: python3 ../../../transit/src/transit.py anova iron_combined_wig4.txt iron_samples_metadata.txt H37Rv.prot_table anova_iron.txt
#parameters: normalization=TTR, trimming=0.0/0.0% (N/C), pseudocounts=5
#Rv	Gene	TAs	Mean_HighFeMBT	Mean_LowFeMBT	Mean_FeCMBT	Mean_Hemin	Mean_Hemoglobin	Mean_HeminMBT	LFC_HighFeMBT	LFC_LowFeMBT	LFC_FeCMBT	LFC_Hemin	LFC_Hemoglobin	LFC_HeminMBT	pval	padj	status
Rv0001	dnaA	31	0.00	0.00	0.00	0.14	0.15	0.00	-0.014	-0.014	-0.014	0.026	0.028	-0.014	0.626418	1.000000	-
Rv0002	dnaN	31	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv0003	recF	35	57.02	54.33	59.56	59.37	52.49	60.84	-0.006	-0.070	0.052	0.048	-0.115	0.080	0.968259	1.000000	-
Rv0004	-	7	12.13	10.14	16.55	11.14	15.59	8.68	-0.020	-0.199	0.311	-0.106	0.245	-0.345	0.979599	1.000000	-
Rv0005	gyrB	42	2.25	4.11	3.35	4.79	4.38	5.15	-0.313	0.017	-0.110	0.120	0.059	0.173	0.893349	1.000000	-
Rv0006	gyrA	45	7.02	5.87	6.40	4.48	2.61	4.34	0.249	0.103	0.172	-0.095	-0.411	-0.116	0.965798	1.000000	-
Rv0007	-	10	142.70	223.20	159.94	217.56	263.46	142.35	-0.412	0.216	-0.253	0.179	0.450	-0.416	0.002092	0.046893	-
Rv0008c	-	4	37.18	34.50	37.59	32.93	30.23	39.16	0.067	-0.028	0.081	-0.086	-0.193	0.133	0.992345	1.000000	-
Rv0009	ppiA	7	128.64	158.13	158.52	196.33	193.99	144.14	-0.333	-0.045	-0.042	0.259	0.242	-0.174	0.455567	1.000000	-
Rv0010c	-	10	162.07	185.98	124.85	131.09	148.65	161.36	0.087	0.280	-0.277	-0.209	-0.034	0.080	0.907787	1.000000	-
Rv0011c	-	3	27.45	39.12	11.47	64.56	65.85	38.45	-0.508	-0.065	-1.487	0.592	0.619	-0.087	0.036505	0.496107	-
Rv0012	-	16	89.09	136.39	100.65	89.08	83.69	90.40	-0.134	0.454	0.034	-0.134	-0.219	-0.114	0.096278	1.000000	-
Rv0013	trpG	15	3.65	3.70	6.04	4.10	5.36	2.07	-0.082	-0.073	0.270	-0.008	0.179	-0.373	0.846379	1.000000	-
Rv0014c	pknB	24	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv0015c	pknA	16	12.39	11.13	15.45	12.88	11.62	19.43	-0.114	-0.222	0.120	-0.074	-0.180	0.377	0.972914	1.000000	-
Rv0016c	pbpA	37	58.46	80.04	62.65	75.96	97.78	66.92	-0.309	0.113	-0.217	0.042	0.386	-0.129	0.010704	0.192380	-
Rv0017c	rodA	27	83.03	138.41	76.20	142.48	183.51	125.42	-0.561	0.143	-0.677	0.184	0.538	0.006	0.000001	0.000043	-
Rv0018c	ppp	25	53.83	69.36	56.80	85.73	90.26	76.85	-0.391	-0.053	-0.320	0.234	0.304	0.085	0.178890	1.000000	-
Rv0019c	-	13	215.15	225.38	173.23	286.30	277.75	224.74	-0.117	-0.052	-0.422	0.287	0.244	-0.056	0.019050	0.301624	-
Rv0020c	TB39.8	52	22.97	27.93	22.30	30.57	30.25	29.35	-0.204	0.031	-0.240	0.142	0.129	0.092	0.900058	1.000000	-
Rv0021c	-	22	228.82	226.08	237.31	219.39	218.61	216.90	0.027	0.010	0.078	-0.033	-0.038	-0.049	0.997359	1.000000	-
Rv0022c	whiB5	8	345.17	361.50	382.62	350.30	297.67	288.61	0.031	0.097	0.178	0.052	-0.179	-0.223	0.938563	1.000000	-
Rv0023	-	12	3.57	9.69	1.58	12.12	18.56	4.73	-0.642	0.135	-1.023	0.356	0.817	-0.460	0.000550	0.014258	-
Rv0024	-	12	374.37	326.67	353.97	285.34	319.58	311.05	0.186	-0.008	0.106	-0.200	-0.039	-0.078	0.788406	1.000000	-
Rv0025	-	7	196.53	194.53	178.60	192.68	166.19	162.17	0.110	0.095	-0.025	0.082	-0.126	-0.160	0.956396	1.000000	-
Rv0026	-	14	119.43	120.01	105.08	113.40	107.63	134.35	0.033	0.039	-0.144	-0.039	-0.111	0.196	0.950115	1.000000	-
Rv0027	-	5	40.11	25.43	41.87	33.71	42.79	39.30	0.096	-0.472	0.151	-0.124	0.179	0.070	0.875406	1.000000	-
Rv0028	-	5	101.36	131.59	103.22	95.80	77.98	118.83	-0.046	0.315	-0.021	-0.123	-0.404	0.174	0.827426	1.000000	-
Rv0029	-	18	246.57	235.65	265.96	238.79	244.84	245.10	0.002	-0.062	0.110	-0.043	-0.008	-0.006	0.995280	1.000000	-
Rv0030	-	5	209.75	234.41	261.36	215.23	252.62	214.21	-0.138	0.019	0.173	-0.101	0.125	-0.108	0.976591	1.000000	-
Rv0031	-	1	0.00	30.10	15.50	0.00	102.90	51.40	-2.938	-0.127	-0.902	-2.938	1.494	0.558	1.000000	1.000000	TA sites <= 1
Rv0032	bioF2	57	104.01	103.39	105.75	108.56	108.44	117.49	-0.051	-0.059	-0.028	0.008	0.006	0.117	0.977353	1.000000	-
Rv0033	acpA	3	51.09	71.38	65.58	62.02	77.63	82.27	-0.387	0.059	-0.055	-0.130	0.172	0.251	0.936309	1.000000	-
Rv0034	-	5	175.39	188.37	147.40	171.29	156.53	178.55	0.047	0.147	-0.196	0.014	-0.112	0.072	0.971434	1.000000	-
Rv0035	fadD34	25	321.89	311.37	333.87	333.51	303.84	314.54	0.009	-0.038	0.061	0.059	-0.073	-0.024	0.994413	1.000000	-
Rv0036c	-	4	345.19	383.28	327.74	344.25	345.79	332.58	-0.005	0.144	-0.079	-0.009	-0.003	-0.058	0.968010	1.000000	-
Rv0037c	-	20	223.42	276.10	248.80	362.70	330.77	247.93	-0.327	-0.028	-0.175	0.359	0.228	-0.180	0.223176	1.000000	-
Rv0038	-	7	222.06	220.60	226.03	181.15	218.78	208.94	0.059	0.050	0.084	-0.227	0.038	-0.027	0.974683	1.000000	-
Rv0039c	-	4	635.48	474.63	550.26	498.62	415.55	420.63	0.345	-0.072	0.139	-0.002	-0.262	-0.244	0.907785	1.000000	-
Rv0040c	mtc28	9	182.43	196.36	142.67	186.58	194.02	169.97	0.029	0.133	-0.315	0.061	0.116	-0.070	0.963538	1.000000	-
Rv0041	leuS	72	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv0042c	-	5	58.92	70.26	75.34	51.54	46.54	70.42	-0.072	0.164	0.258	-0.248	-0.382	0.167	0.515640	1.000000	-
Rv0043c	-	10	109.79	121.11	88.21	91.52	72.63	102.88	0.161	0.296	-0.140	-0.089	-0.404	0.071	0.094156	1.000000	-
Rv0044c	-	20	117.41	126.47	129.00	130.35	126.56	126.98	-0.099	0.004	0.031	0.046	0.005	0.009	0.995257	1.000000	-
Rv0045c	-	7	286.36	312.72	319.03	330.18	329.67	375.16	-0.182	-0.057	-0.029	0.020	0.018	0.202	0.934219	1.000000	-
Rv0046c	ino1	16	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv0047c	-	7	106.44	119.48	115.68	161.95	152.91	123.13	-0.276	-0.116	-0.161	0.307	0.227	-0.075	0.704186	1.000000	-
Rv0048c	-	16	143.83	131.49	123.87	136.13	148.82	157.88	0.034	-0.091	-0.174	-0.042	0.082	0.164	0.984593	1.000000	-
Rv0049	-	8	147.20	267.78	180.42	314.15	365.00	222.32	-0.742	0.100	-0.457	0.327	0.540	-0.163	0.011159	0.197221	-
Rv0050	ponA1	37	39.40	62.19	44.86	57.52	68.78	51.91	-0.413	0.185	-0.246	0.081	0.320	-0.055	0.042852	0.560587	-
Rv0051	-	34	114.53	103.10	117.20	116.67	118.41	102.47	0.030	-0.115	0.062	0.056	0.076	-0.123	0.922637	1.000000	-
Rv0052	-	7	162.41	108.48	131.33	150.58	106.97	128.31	0.296	-0.265	-0.000	0.190	-0.284	-0.032	0.810386	1.000000	-
Rv0053	rpsF	6	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv0054	ssb	5	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv0055	rpsR	4	15.52	21.76	19.50	27.44	39.71	22.08	-0.516	-0.132	-0.260	0.145	0.608	-0.116	0.929315	1.000000	-
Rv0056	rplI	7	152.26	153.32	116.25	93.35	103.71	153.23	0.234	0.244	-0.141	-0.443	-0.298	0.243	0.534896	1.000000	-
Rv0057	-	15	45.70	51.34	64.38	60.85	66.78	59.08	-0.314	-0.162	0.139	0.063	0.188	0.024	0.525640	1.000000	-
Rv0058	dnaB	39	0.00	0.00	0.00	0.00	0.12	0.00	-0.006	-0.006	-0.006	-0.006	0.027	-0.006	0.306755	1.000000	-
Rv0059	-	20	169.56	132.79	170.63	150.67	155.80	130.92	0.155	-0.186	0.164	-0.010	0.037	-0.205	0.687737	1.000000	-
Rv0060	-	23	12.58	15.73	13.99	13.25	18.48	11.60	-0.132	0.105	-0.021	-0.079	0.285	-0.215	0.996254	1.000000	-
Rv0061	-	6	72.02	72.98	114.96	76.15	80.16	69.34	-0.158	-0.140	0.481	-0.083	-0.013	-0.209	0.666333	1.000000	-
Rv0062	celA1	21	242.88	243.43	227.47	257.52	230.26	224.15	0.031	0.034	-0.062	0.114	-0.044	-0.082	0.915924	1.000000	-
Rv0063	-	23	103.67	98.71	108.20	95.44	96.86	100.91	0.041	-0.026	0.100	-0.073	-0.052	0.004	0.992321	1.000000	-
Rv0064	-	68	80.41	70.74	89.77	75.67	66.24	75.35	0.070	-0.103	0.220	-0.012	-0.192	-0.018	0.300347	1.000000	-
Rv0065	-	8	114.01	153.59	148.14	145.07	156.28	150.32	-0.330	0.084	0.034	0.005	0.109	0.054	0.852004	1.000000	-
Rv0066c	icd2	38	61.82	89.04	55.18	111.94	114.45	82.57	-0.443	0.050	-0.594	0.364	0.395	-0.053	0.000002	0.000073	-
Rv0067c	-	12	96.22	141.20	101.60	131.59	146.68	112.69	-0.324	0.207	-0.249	0.109	0.260	-0.106	0.069266	0.812855	-
Rv0068	-	12	212.02	181.95	176.29	179.58	187.21	184.41	0.177	-0.038	-0.082	-0.056	0.002	-0.019	0.995551	1.000000	-
Rv0069c	sdaA	12	71.12	68.65	67.19	55.51	75.24	64.21	0.081	0.033	0.004	-0.251	0.157	-0.057	0.807356	1.000000	-
Rv0070c	glyA2	18	163.97	169.26	179.21	164.52	156.25	133.96	0.024	0.068	0.148	0.029	-0.044	-0.258	0.924617	1.000000	-
Rv0071	-	8	139.71	151.47	175.91	149.69	137.58	218.21	-0.207	-0.095	0.115	-0.111	-0.229	0.418	0.621477	1.000000	-
Rv0072	-	16	249.29	289.54	249.03	259.78	270.98	275.51	-0.090	0.122	-0.092	-0.032	0.028	0.051	0.962199	1.000000	-
Rv0073	-	15	254.41	244.74	208.60	205.15	210.81	225.40	0.175	0.120	-0.106	-0.129	-0.091	0.003	0.707864	1.000000	-
Rv0074	-	19	134.08	134.32	134.46	129.30	133.43	141.80	-0.005	-0.002	-0.001	-0.055	-0.012	0.073	0.998840	1.000000	-
Rv0075	-	24	176.33	171.83	176.58	182.15	162.16	164.99	0.032	-0.004	0.034	0.078	-0.085	-0.061	0.996862	1.000000	-
Rv0076c	-	3	171.89	191.86	158.68	169.08	244.57	261.78	-0.210	-0.056	-0.322	-0.233	0.286	0.383	0.414545	1.000000	-
Rv0077c	-	14	128.67	101.15	127.30	126.17	109.20	107.13	0.137	-0.196	0.122	0.109	-0.091	-0.117	0.778710	1.000000	-
Rv0078	-	8	95.41	92.99	68.10	75.16	78.52	76.40	0.222	0.187	-0.236	-0.103	-0.044	-0.081	0.893964	1.000000	-
Rv0078A	-	10	117.61	125.50	116.29	122.83	108.13	132.20	-0.033	0.057	-0.048	0.027	-0.149	0.129	0.990574	1.000000	-
Rv0079	-	14	289.56	246.20	250.15	259.54	244.27	224.16	0.195	-0.035	-0.012	0.040	-0.046	-0.167	0.750810	1.000000	-
Rv0080	-	4	46.15	44.59	42.31	52.13	29.09	65.14	-0.012	-0.057	-0.124	0.148	-0.597	0.444	0.422240	1.000000	-
Rv0081	-	5	93.20	91.37	117.00	71.74	121.99	97.56	-0.080	-0.107	0.233	-0.436	0.291	-0.017	0.821339	1.000000	-
Rv0082	-	7	115.31	121.51	122.80	123.71	109.58	100.90	-0.004	0.069	0.083	0.093	-0.074	-0.188	0.995151	1.000000	-
Rv0083	-	23	257.39	237.03	251.35	247.87	252.27	211.77	0.082	-0.035	0.048	0.028	0.053	-0.194	0.835913	1.000000	-
Rv0084	hycD	9	170.38	172.84	176.68	169.43	176.71	169.90	-0.019	0.002	0.032	-0.026	0.033	-0.023	0.999978	1.000000	-
Rv0085	hycP	4	82.20	94.39	112.08	112.04	107.15	128.77	-0.350	-0.161	0.076	0.075	0.014	0.268	0.753996	1.000000	-
Rv0086	hycQ	15	106.00	111.48	117.07	113.34	101.98	101.39	-0.033	0.037	0.104	0.060	-0.086	-0.094	0.966344	1.000000	-
Rv0087	hycE	25	116.56	80.09	104.83	76.46	92.04	77.80	0.336	-0.179	0.190	-0.241	0.011	-0.218	0.628889	1.000000	-
Rv0088	-	14	94.72	76.32	79.30	77.77	74.05	60.92	0.279	-0.015	0.037	0.010	-0.056	-0.318	0.719153	1.000000	-
Rv0089	-	10	188.68	176.73	218.71	173.41	190.04	130.76	0.068	-0.024	0.276	-0.050	0.078	-0.444	0.628854	1.000000	-
Rv0090	-	12	219.88	163.38	193.58	215.14	188.78	161.41	0.203	-0.214	0.024	0.172	-0.012	-0.231	0.806809	1.000000	-
Rv0091	mtn	11	203.75	177.74	190.15	193.96	166.34	167.05	0.150	-0.042	0.053	0.081	-0.135	-0.129	0.975259	1.000000	-
Rv0092	ctpA	30	177.00	164.91	159.88	150.27	131.30	162.09	0.163	0.064	0.020	-0.066	-0.254	0.040	0.695687	1.000000	-
Rv0093c	-	8	238.18	205.08	239.40	201.15	206.05	200.79	0.144	-0.067	0.151	-0.095	-0.061	-0.097	0.933376	1.000000	-
Rv0094c	-	14	194.24	194.17	209.93	200.16	187.73	213.13	-0.040	-0.041	0.069	0.002	-0.088	0.090	0.994424	1.000000	-
Rv0095c	-	9	36.18	46.90	53.53	42.00	41.93	61.15	-0.335	-0.001	0.172	-0.144	-0.147	0.349	0.764927	1.000000	-
Rv0096	PPE1	34	235.32	232.21	253.12	254.01	225.20	231.64	-0.019	-0.038	0.084	0.089	-0.082	-0.042	0.965515	1.000000	-
Rv0097	-	26	52.58	58.85	55.85	54.55	55.99	65.64	-0.112	0.037	-0.033	-0.064	-0.029	0.183	0.930459	1.000000	-
Rv0098	-	11	67.50	93.07	54.39	63.36	57.45	65.28	0.013	0.449	-0.275	-0.072	-0.202	-0.032	0.407126	1.000000	-
Rv0099	fadD10	32	42.44	46.62	53.29	41.81	40.98	37.10	-0.038	0.084	0.259	-0.057	-0.083	-0.210	0.777293	1.000000	-
Rv0100	-	3	46.54	40.57	34.42	40.73	63.77	60.92	-0.036	-0.213	-0.422	-0.208	0.381	0.320	0.478739	1.000000	-
Rv0101	nrp	122	118.24	99.72	114.84	111.86	101.94	108.40	0.110	-0.125	0.070	0.034	-0.094	-0.010	0.436985	1.000000	-
Rv0102	-	42	8.33	11.06	4.33	5.11	4.43	9.57	0.135	0.404	-0.380	-0.264	-0.365	0.264	0.048654	0.616288	-
Rv0103c	ctpB	30	190.36	179.94	199.51	195.40	184.18	162.47	0.038	-0.041	0.104	0.075	-0.009	-0.184	0.980465	1.000000	-
Rv0104	-	27	254.17	256.69	244.82	236.72	235.17	235.92	0.058	0.072	0.005	-0.042	-0.052	-0.047	0.964590	1.000000	-
Rv0105c	rpmB	5	206.56	196.40	180.84	138.82	143.97	143.74	0.287	0.216	0.100	-0.270	-0.219	-0.221	0.810302	1.000000	-
Rv0106	-	12	146.84	129.29	127.65	116.39	116.93	121.39	0.208	0.031	0.013	-0.114	-0.108	-0.056	0.883345	1.000000	-
Rv0107c	ctpI	65	141.05	129.62	137.69	134.85	134.59	121.48	0.080	-0.038	0.046	0.017	0.014	-0.128	0.928033	1.000000	-
Rv0108c	-	2	16.88	18.02	26.67	26.15	22.98	34.38	-0.415	-0.342	0.118	0.094	-0.061	0.432	0.853281	1.000000	-
Rv0109	PE_PGRS1	27	94.63	61.61	79.72	81.09	82.06	74.47	0.247	-0.333	0.013	0.037	0.053	-0.079	0.764633	1.000000	-
Rv0110	-	13	342.87	328.09	346.58	339.84	300.50	300.45	0.070	0.007	0.085	0.057	-0.117	-0.118	0.955261	1.000000	-
Rv0111	-	42	154.27	147.87	146.33	134.13	152.54	148.07	0.066	0.006	-0.008	-0.130	0.050	0.008	0.948802	1.000000	-
Rv0112	gca	31	1.46	2.30	1.52	1.85	3.00	2.76	-0.145	0.031	-0.134	-0.061	0.162	0.119	0.683104	1.000000	-
Rv0113	gmhA	12	68.56	65.42	59.64	39.03	67.32	62.30	0.170	0.107	-0.016	-0.570	0.146	0.042	0.158115	1.000000	-
Rv0114	gmhB	9	180.50	178.49	150.50	146.66	149.98	178.26	0.134	0.118	-0.121	-0.157	-0.125	0.116	0.967213	1.000000	-
Rv0115	hddA	18	155.45	134.00	126.55	144.60	143.40	152.98	0.118	-0.089	-0.168	0.017	0.006	0.096	0.886468	1.000000	-
Rv0116c	-	17	108.79	110.72	107.21	95.70	108.30	121.08	0.002	0.026	-0.018	-0.174	-0.004	0.150	0.855790	1.000000	-
Rv0117	oxyS	17	71.50	70.93	83.53	66.71	73.84	87.44	-0.076	-0.087	0.134	-0.170	-0.033	0.197	0.876886	1.000000	-
Rv0118c	oxcA	26	146.07	138.37	150.56	140.57	114.96	111.03	0.124	0.049	0.167	0.071	-0.208	-0.256	0.674846	1.000000	-
Rv0119	fadD7	13	49.61	58.06	45.88	56.01	56.07	36.91	-0.021	0.186	-0.123	0.139	0.140	-0.403	0.822448	1.000000	-
Rv0120c	fusA2	27	48.64	45.08	57.67	48.84	47.29	49.30	-0.022	-0.121	0.202	-0.017	-0.059	-0.005	0.868662	1.000000	-
Rv0121c	-	10	152.62	155.41	140.62	134.33	136.79	123.73	0.115	0.140	0.000	-0.063	-0.038	-0.177	0.995235	1.000000	-
Rv0122	-	9	46.47	35.61	57.28	43.44	50.12	73.66	-0.124	-0.466	0.151	-0.212	-0.025	0.488	0.470581	1.000000	-
Rv0123	-	8	57.02	72.21	78.14	59.45	51.64	46.23	-0.085	0.231	0.338	-0.030	-0.216	-0.361	0.908427	1.000000	-
Rv0124	PE_PGRS2	13	228.96	243.68	237.23	222.19	206.16	205.17	0.032	0.120	0.082	-0.011	-0.116	-0.123	0.978914	1.000000	-
Rv0125	pepA	10	175.46	167.87	188.21	146.56	139.62	166.14	0.095	0.033	0.193	-0.157	-0.225	0.018	0.897445	1.000000	-
Rv0126	treS	31	136.11	187.98	122.63	173.94	187.13	133.51	-0.198	0.254	-0.343	0.145	0.247	-0.225	0.012694	0.219263	-
Rv0127	-	30	74.25	104.68	64.77	102.53	103.81	101.99	-0.292	0.177	-0.476	0.149	0.166	0.141	0.002364	0.051821	-
Rv0128	-	19	267.75	237.99	257.15	246.42	242.91	255.90	0.089	-0.077	0.032	-0.028	-0.048	0.025	0.979798	1.000000	-
Rv0129c	fbpC	28	53.67	78.33	61.69	63.30	103.40	67.71	-0.380	0.126	-0.195	-0.161	0.506	-0.070	0.040686	0.537538	-
Rv0130	-	4	73.55	75.36	95.50	97.99	99.66	112.02	-0.310	-0.277	0.046	0.081	0.105	0.266	0.655444	1.000000	-
Rv0131c	fadE1	18	142.41	162.87	162.68	163.89	160.45	153.90	-0.142	0.045	0.044	0.054	0.024	-0.034	0.958699	1.000000	-
Rv0132c	fgd2	15	176.13	182.35	180.64	193.54	162.05	186.32	-0.032	0.017	0.004	0.101	-0.149	0.047	0.976602	1.000000	-
Rv0133	-	7	223.57	191.42	187.28	226.53	214.60	195.32	0.112	-0.106	-0.137	0.131	0.055	-0.078	0.978942	1.000000	-
Rv0134	ephF	12	246.58	242.78	259.50	218.90	230.21	222.73	0.057	0.035	0.130	-0.111	-0.040	-0.086	0.977065	1.000000	-
Rv0135c	-	11	267.14	169.04	214.75	103.46	122.54	157.53	0.617	-0.028	0.309	-0.710	-0.476	-0.126	0.003158	0.066321	-
Rv0136	cyp138	23	174.58	177.71	183.93	170.56	178.82	176.76	-0.020	0.005	0.053	-0.052	0.014	-0.002	0.999400	1.000000	-
Rv0137c	msrA	11	60.58	64.71	67.09	52.85	74.43	75.66	-0.112	-0.024	0.024	-0.293	0.164	0.186	0.848127	1.000000	-
Rv0138	-	6	591.04	549.24	541.82	532.41	491.37	495.14	0.146	0.042	0.022	-0.003	-0.118	-0.107	0.972186	1.000000	-
Rv0139	-	12	411.93	361.39	398.78	406.72	362.65	336.73	0.116	-0.070	0.070	0.098	-0.065	-0.171	0.968001	1.000000	-
Rv0140	-	15	123.43	115.57	118.56	114.46	119.56	127.06	0.042	-0.049	-0.014	-0.063	-0.002	0.082	0.998320	1.000000	-
Rv0141c	-	9	168.69	184.16	185.24	170.56	168.25	158.38	-0.032	0.091	0.100	-0.016	-0.035	-0.120	0.992118	1.000000	-
Rv0142	-	6	372.82	323.70	300.98	305.54	315.91	220.57	0.278	0.077	-0.026	-0.005	0.043	-0.466	0.812826	1.000000	-
Rv0143c	-	27	195.67	166.97	186.68	161.41	184.97	186.40	0.115	-0.108	0.048	-0.155	0.036	0.046	0.822264	1.000000	-
Rv0144	-	14	112.41	131.01	95.86	107.53	98.03	118.84	0.022	0.234	-0.197	-0.039	-0.166	0.099	0.941713	1.000000	-
Rv0145	-	15	302.32	262.64	239.32	258.48	230.04	237.10	0.241	0.042	-0.090	0.019	-0.146	-0.103	0.875293	1.000000	-
Rv0146	-	16	375.72	363.50	330.56	319.05	321.67	319.02	0.149	0.102	-0.033	-0.083	-0.071	-0.083	0.940522	1.000000	-
Rv0147	-	26	282.41	271.36	257.55	253.00	263.81	283.82	0.071	0.014	-0.060	-0.085	-0.026	0.078	0.970320	1.000000	-
Rv0148	-	16	274.87	285.14	243.08	248.93	228.99	245.20	0.110	0.162	-0.064	-0.031	-0.149	-0.052	0.866971	1.000000	-
Rv0149	-	21	167.52	170.58	173.33	166.37	159.63	166.15	0.002	0.028	0.050	-0.007	-0.065	-0.009	0.999536	1.000000	-
Rv0150c	-	4	11.80	23.00	21.24	13.76	18.49	28.39	-0.541	0.196	0.102	-0.382	-0.058	0.450	0.699865	1.000000	-
Rv0151c	PE1	44	120.88	129.72	109.52	112.74	121.08	137.46	-0.012	0.086	-0.148	-0.108	-0.009	0.167	0.527576	1.000000	-
Rv0152c	PE2	40	154.12	153.56	151.21	156.00	152.62	170.38	-0.020	-0.025	-0.046	-0.003	-0.033	0.121	0.986796	1.000000	-
Rv0153c	ptbB	11	114.11	177.32	78.42	214.06	194.67	141.89	-0.411	0.203	-0.925	0.468	0.334	-0.109	0.000820	0.020326	-
Rv0154c	fadE2	12	129.07	160.20	120.42	164.47	183.00	163.49	-0.241	0.060	-0.337	0.097	0.247	0.089	0.699461	1.000000	-
Rv0155	pntAa	10	392.77	395.84	402.52	425.08	407.06	303.00	0.018	0.030	0.053	0.131	0.069	-0.351	0.902869	1.000000	-
Rv0156	pntAb	1	164.54	209.40	236.79	192.44	191.30	352.06	-0.436	-0.098	0.076	-0.217	-0.225	0.638	1.000000	1.000000	TA sites <= 1
Rv0157	pntB	14	272.44	288.97	268.18	262.05	282.87	312.57	-0.045	0.039	-0.067	-0.100	0.009	0.150	0.964584	1.000000	-
Rv0158	-	16	243.01	267.86	207.85	233.51	226.09	274.76	0.005	0.143	-0.216	-0.052	-0.097	0.179	0.690559	1.000000	-
Rv0159c	PE3	50	226.21	226.65	234.43	208.73	206.81	218.87	0.037	0.040	0.088	-0.076	-0.089	-0.009	0.966298	1.000000	-
Rv0160c	PE4	42	174.99	164.11	161.27	165.90	163.00	179.83	0.056	-0.034	-0.059	-0.019	-0.044	0.094	0.980670	1.000000	-
Rv0161	-	19	116.28	102.45	103.58	111.11	116.32	101.93	0.094	-0.080	-0.065	0.031	0.095	-0.088	0.987708	1.000000	-
Rv0162c	adhE1	16	102.63	130.41	143.77	121.79	115.31	140.68	-0.281	0.050	0.186	-0.045	-0.120	0.156	0.890799	1.000000	-
Rv0163	-	10	168.59	152.15	162.07	156.37	171.39	176.41	0.034	-0.109	-0.021	-0.071	0.058	0.098	0.994327	1.000000	-
Rv0164	TB18.5	8	54.73	50.94	55.27	51.10	58.22	70.93	-0.051	-0.145	-0.038	-0.141	0.031	0.296	0.999245	1.000000	-
Rv0165c	-	8	146.11	115.60	131.68	145.36	153.88	103.24	0.135	-0.191	-0.010	0.127	0.207	-0.347	0.810603	1.000000	-
Rv0166	fadD5	27	187.26	182.55	175.70	175.27	168.27	173.15	0.079	0.043	-0.011	-0.014	-0.071	-0.031	0.994702	1.000000	-
Rv0167	yrbE1A	7	137.80	136.01	98.15	121.49	89.96	153.78	0.159	0.141	-0.310	-0.016	-0.429	0.312	0.574074	1.000000	-
Rv0168	yrbE1B	14	103.18	117.20	71.68	113.89	100.35	120.81	-0.018	0.158	-0.514	0.118	-0.056	0.200	0.433841	1.000000	-
Rv0169	mce1A	39	82.75	107.92	76.33	99.93	92.91	118.05	-0.207	0.156	-0.317	0.051	-0.049	0.280	0.102040	1.000000	-
Rv0170	mce1B	18	176.04	215.33	159.81	162.32	185.32	237.40	-0.103	0.181	-0.238	-0.216	-0.030	0.319	0.273228	1.000000	-
Rv0171	mce1C	25	177.82	242.63	152.86	185.91	214.54	230.02	-0.170	0.268	-0.381	-0.107	0.094	0.193	0.025922	0.376412	-
Rv0172	mce1D	33	91.27	119.84	85.82	99.71	105.42	133.84	-0.205	0.170	-0.289	-0.084	-0.007	0.323	0.089516	0.986655	-
Rv0173	lprK	16	196.95	211.21	172.32	205.85	196.99	245.79	-0.055	0.043	-0.243	0.007	-0.055	0.257	0.799593	1.000000	-
Rv0174	mce1F	31	128.89	197.66	120.97	148.00	162.21	198.08	-0.295	0.303	-0.383	-0.103	0.025	0.306	0.009741	0.179932	-
Rv0175	-	9	173.43	225.01	119.35	169.57	194.14	219.84	-0.080	0.287	-0.601	-0.111	0.079	0.254	0.514232	1.000000	-
Rv0176	-	15	219.08	265.70	202.35	244.19	242.67	281.13	-0.144	0.129	-0.256	0.010	0.001	0.209	0.730014	1.000000	-
Rv0177	-	12	43.28	53.96	35.22	39.49	43.01	55.54	-0.053	0.235	-0.316	-0.171	-0.061	0.273	0.891161	1.000000	-
Rv0178	-	11	150.76	130.49	85.40	107.65	135.52	132.94	0.274	0.073	-0.511	-0.193	0.126	0.099	0.756536	1.000000	-
Rv0179c	lprO	22	225.35	185.40	205.01	198.39	188.22	191.06	0.176	-0.099	0.043	-0.004	-0.078	-0.057	0.893972	1.000000	-
Rv0180c	-	28	40.02	42.02	36.56	40.04	48.10	43.98	-0.055	0.007	-0.171	-0.055	0.183	0.066	0.937404	1.000000	-
Rv0181c	-	15	135.03	149.16	140.64	142.92	141.62	140.65	-0.067	0.072	-0.010	0.012	-0.001	-0.010	0.998407	1.000000	-
Rv0182c	sigG	21	191.75	192.61	176.97	164.57	174.47	181.90	0.086	0.092	-0.027	-0.129	-0.047	0.012	0.948530	1.000000	-
Rv0183	-	15	293.74	269.12	268.44	253.42	222.65	258.63	0.167	0.043	0.040	-0.042	-0.225	-0.013	0.654891	1.000000	-
Rv0184	-	11	199.79	227.73	204.52	242.61	223.04	221.54	-0.135	0.050	-0.102	0.139	0.020	0.011	0.989680	1.000000	-
Rv0185	-	10	118.96	127.17	115.39	110.36	124.55	128.71	-0.022	0.071	-0.064	-0.126	0.042	0.087	0.996254	1.000000	-
Rv0186	bglS	34	114.56	115.94	124.40	105.78	106.95	120.74	-0.002	0.015	0.112	-0.112	-0.097	0.071	0.885389	1.000000	-
Rv0187	-	7	315.94	334.12	315.74	280.08	246.07	222.57	0.142	0.222	0.142	-0.028	-0.212	-0.353	0.742880	1.000000	-
Rv0188	-	10	234.17	167.01	183.39	178.50	188.35	191.45	0.291	-0.185	-0.053	-0.091	-0.016	0.007	0.980379	1.000000	-
Rv0189c	ilvD	22	8.60	3.75	8.73	1.90	0.00	10.06	0.373	-0.264	0.386	-0.607	-1.071	0.519	0.060902	0.740847	-
Rv0190	-	3	504.02	654.06	406.15	681.90	450.07	536.80	-0.095	0.277	-0.404	0.337	-0.257	-0.005	0.826380	1.000000	-
Rv0191	-	19	454.89	400.59	424.32	394.10	401.46	382.72	0.149	-0.032	0.050	-0.055	-0.029	-0.097	0.936015	1.000000	-
Rv0192	-	13	263.59	258.72	284.96	224.71	270.88	280.90	-0.002	-0.028	0.108	-0.228	0.037	0.088	0.784356	1.000000	-
Rv0192A	-	2	321.33	250.22	332.31	282.17	256.25	298.91	0.145	-0.210	0.192	-0.040	-0.176	0.042	0.384284	1.000000	-
Rv0193c	-	34	233.53	252.45	238.85	240.84	243.88	253.07	-0.061	0.049	-0.029	-0.017	0.001	0.053	0.982633	1.000000	-
Rv0194	-	55	336.93	338.85	339.25	322.15	304.48	314.98	0.046	0.055	0.056	-0.017	-0.097	-0.049	0.897758	1.000000	-
Rv0195	-	6	416.82	400.37	378.41	360.09	367.39	384.39	0.115	0.057	-0.023	-0.094	-0.065	-0.001	0.999772	1.000000	-
Rv0196	-	7	254.84	250.14	213.81	222.77	222.00	234.54	0.127	0.100	-0.121	-0.063	-0.068	0.009	0.973904	1.000000	-
Rv0197	-	33	144.68	117.55	145.70	115.89	120.18	114.99	0.187	-0.102	0.197	-0.121	-0.071	-0.132	0.098061	1.000000	-
Rv0198c	-	42	70.23	62.01	65.93	66.25	71.88	76.07	0.029	-0.138	-0.056	-0.049	0.060	0.137	0.834264	1.000000	-
Rv0199	-	12	17.16	19.49	14.62	32.13	23.39	25.44	-0.287	-0.143	-0.462	0.457	0.070	0.171	0.640783	1.000000	-
Rv0200	-	7	105.26	134.32	90.38	209.31	179.50	116.58	-0.387	-0.050	-0.597	0.571	0.355	-0.246	0.296511	1.000000	-
Rv0201c	-	8	100.63	144.70	110.97	131.57	121.35	150.21	-0.317	0.186	-0.182	0.054	-0.058	0.238	0.306507	1.000000	-
Rv0202c	mmpL11	39	10.07	18.39	60.52	160.86	168.46	13.10	-2.351	-1.717	-0.231	1.109	1.174	-2.087	0.000000	0.000000	-
Rv0203	-	3	327.99	377.08	384.81	310.70	320.24	348.50	-0.071	0.127	0.156	-0.148	-0.105	0.015	0.861832	1.000000	-
Rv0204c	-	19	92.86	156.61	139.02	127.57	173.23	108.23	-0.495	0.229	0.062	-0.057	0.370	-0.285	0.050670	0.635771	-
Rv0205	-	12	238.80	196.81	199.38	203.46	205.28	237.63	0.158	-0.115	-0.097	-0.068	-0.056	0.151	0.902913	1.000000	-
Rv0206c	mmpL3	34	5.52	4.65	2.67	6.79	8.36	3.93	0.028	-0.097	-0.429	0.192	0.372	-0.209	0.690868	1.000000	-
Rv0207c	-	9	96.93	129.10	85.59	139.15	109.66	94.73	-0.164	0.232	-0.334	0.336	0.006	-0.195	0.911208	1.000000	-
Rv0208c	trmB	12	109.05	106.49	91.28	88.23	85.03	100.50	0.164	0.132	-0.080	-0.126	-0.177	0.052	0.945325	1.000000	-
Rv0209	-	15	224.46	234.97	245.95	252.02	208.04	218.12	-0.038	0.027	0.091	0.126	-0.145	-0.078	0.952082	1.000000	-
Rv0210	-	13	500.24	466.79	465.07	457.72	485.17	454.41	0.084	-0.015	-0.020	-0.043	0.041	-0.053	0.998464	1.000000	-
Rv0211	pckA	24	90.82	127.54	68.72	194.68	224.87	115.58	-0.568	-0.100	-0.946	0.491	0.695	-0.236	0.000168	0.004709	-
Rv0212c	nadR	6	135.70	146.66	123.70	132.52	134.13	119.65	0.038	0.146	-0.091	0.005	0.022	-0.137	0.988205	1.000000	-
Rv0213c	-	31	98.98	101.76	84.79	94.22	95.48	106.91	0.027	0.066	-0.184	-0.040	-0.022	0.133	0.953336	1.000000	-
Rv0214	fadD4	34	139.40	128.49	119.59	125.98	132.24	138.17	0.090	-0.023	-0.123	-0.050	0.017	0.078	0.871414	1.000000	-
Rv0215c	fadE3	18	136.44	128.63	137.41	142.71	140.59	149.93	-0.029	-0.111	-0.019	0.034	0.013	0.103	0.998538	1.000000	-
Rv0216	-	23	85.20	79.41	70.87	65.72	73.17	64.76	0.206	0.111	-0.043	-0.145	-0.000	-0.165	0.783290	1.000000	-
Rv0217c	lipW	21	194.97	197.47	182.64	175.18	167.13	166.42	0.107	0.125	0.015	-0.043	-0.109	-0.115	0.906025	1.000000	-
Rv0218	-	19	96.73	69.36	72.80	68.72	64.95	76.23	0.350	-0.102	-0.037	-0.114	-0.190	0.026	0.305697	1.000000	-
Rv0219	-	11	203.60	150.58	163.18	147.27	156.44	159.06	0.309	-0.114	-0.001	-0.145	-0.060	-0.037	0.477727	1.000000	-
Rv0220	lipC	24	94.42	110.87	107.86	114.50	91.42	107.36	-0.138	0.083	0.045	0.127	-0.182	0.038	0.716370	1.000000	-
Rv0221	-	28	160.36	139.44	162.36	138.48	137.01	146.95	0.117	-0.078	0.135	-0.087	-0.102	-0.005	0.760453	1.000000	-
Rv0222	echA1	8	72.62	67.92	85.24	69.22	72.19	75.98	-0.023	-0.113	0.194	-0.088	-0.031	0.038	0.974006	1.000000	-
Rv0223c	-	25	73.34	81.44	69.76	65.73	66.96	72.05	0.033	0.175	-0.034	-0.114	-0.089	0.009	0.909920	1.000000	-
Rv0224c	-	15	0.00	0.00	0.00	0.29	0.00	0.00	-0.014	-0.014	-0.014	0.067	-0.014	-0.014	0.602744	1.000000	-
Rv0225	-	20	0.00	0.00	0.77	0.00	0.00	0.00	-0.037	-0.037	0.171	-0.037	-0.037	-0.037	0.307267	1.000000	-
Rv0226c	-	29	37.83	29.04	30.06	33.91	27.28	23.24	0.282	-0.049	-0.007	0.143	-0.126	-0.319	0.996848	1.000000	-
Rv0227c	-	23	0.00	0.00	0.00	0.00	0.63	0.00	-0.030	-0.030	-0.030	-0.030	0.141	-0.030	0.032985	0.460172	-
Rv0228	-	14	4.30	4.00	6.88	4.96	1.36	3.51	0.021	-0.027	0.374	0.119	-0.528	-0.107	0.924274	1.000000	-
Rv0229c	-	16	108.69	101.04	86.92	95.71	95.41	121.13	0.094	-0.006	-0.212	-0.080	-0.085	0.244	0.876810	1.000000	-
Rv0230c	php	16	304.66	301.76	289.67	275.12	280.61	296.45	0.063	0.050	-0.008	-0.081	-0.053	0.024	0.996902	1.000000	-
Rv0231	fadE4	36	146.20	165.63	149.85	145.50	155.33	159.51	-0.070	0.105	-0.035	-0.076	0.015	0.052	0.869851	1.000000	-
Rv0232	-	9	346.93	323.82	344.07	317.80	318.52	314.21	0.082	-0.016	0.070	-0.043	-0.040	-0.059	0.997059	1.000000	-
Rv0233	nrdB	11	158.42	149.69	156.45	157.94	172.89	174.64	-0.028	-0.108	-0.046	-0.033	0.094	0.108	0.990538	1.000000	-
Rv0234c	gabD1	23	78.74	86.70	75.33	73.82	71.41	70.31	0.047	0.178	-0.013	-0.040	-0.085	-0.106	0.952490	1.000000	-
Rv0235c	-	27	53.69	53.89	64.53	48.27	57.41	54.29	-0.040	-0.035	0.204	-0.180	0.048	-0.026	0.526826	1.000000	-
Rv0236c	-	39	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv0236A	-	3	0.00	3.40	0.00	0.00	0.00	0.00	-0.155	0.594	-0.155	-0.155	-0.155	-0.155	0.020354	0.317242	-
Rv0237	lpqI	13	175.06	173.41	146.85	170.08	147.62	143.07	0.132	0.118	-0.114	0.091	-0.107	-0.150	0.946901	1.000000	-
Rv0238	-	13	107.48	123.74	89.35	317.04	322.77	152.92	-0.761	-0.566	-1.014	0.757	0.783	-0.271	0.000000	0.000002	-
Rv0239	-	2	139.34	117.27	147.10	129.89	120.90	134.21	0.081	-0.158	0.157	-0.017	-0.116	0.029	0.995838	1.000000	-
Rv0240	-	9	170.13	206.94	226.90	196.09	197.19	214.54	-0.241	0.034	0.164	-0.042	-0.034	0.085	0.786175	1.000000	-
Rv0241c	-	16	65.92	95.42	72.90	63.00	75.91	64.88	-0.137	0.364	-0.002	-0.198	0.053	-0.159	0.833606	1.000000	-
Rv0242c	fabG	11	45.88	83.42	75.34	58.28	59.72	48.41	-0.394	0.404	0.265	-0.079	-0.047	-0.324	0.254077	1.000000	-
Rv0243	fadA2	20	87.36	95.39	101.80	59.02	75.86	66.07	0.104	0.225	0.314	-0.424	-0.088	-0.274	0.097349	1.000000	-
Rv0244c	fadE5	23	271.80	234.95	229.09	195.08	201.72	228.95	0.255	0.049	0.013	-0.213	-0.166	0.012	0.675896	1.000000	-
Rv0245	-	4	124.36	253.55	103.23	139.68	162.45	215.86	-0.407	0.592	-0.664	-0.246	-0.035	0.365	0.216508	1.000000	-
Rv0246	-	33	78.59	77.01	81.09	71.74	65.63	83.86	0.040	0.012	0.082	-0.084	-0.203	0.128	0.922229	1.000000	-
Rv0247c	-	12	55.26	53.43	58.59	44.74	45.63	51.53	0.092	0.048	0.170	-0.185	-0.159	-0.000	0.893516	1.000000	-
Rv0248c	sdhA	39	130.08	114.96	112.76	112.69	107.09	116.33	0.163	-0.008	-0.035	-0.036	-0.106	0.008	0.737316	1.000000	-
Rv0249c	-	23	96.33	93.25	89.59	80.07	74.58	89.87	0.135	0.090	0.036	-0.117	-0.214	0.040	0.645954	1.000000	-
Rv0250c	-	4	72.73	78.69	51.61	73.50	78.79	108.09	-0.081	0.025	-0.539	-0.067	0.027	0.460	0.532771	1.000000	-
Rv0251c	hsp	5	447.03	323.13	365.53	349.49	316.69	319.00	0.335	-0.128	0.048	-0.016	-0.156	-0.146	0.966819	1.000000	-
Rv0252	nirB	41	126.74	129.52	135.81	136.27	136.86	116.22	-0.038	-0.008	0.058	0.063	0.069	-0.158	0.869565	1.000000	-
Rv0253	nirD	7	85.42	65.33	66.44	82.75	59.83	81.11	0.204	-0.158	-0.136	0.161	-0.276	0.134	0.852392	1.000000	-
Rv0254c	cobU	6	240.28	231.25	281.27	224.00	252.69	252.72	-0.039	-0.093	0.184	-0.138	0.032	0.032	0.960051	1.000000	-
Rv0255c	cobQ1	15	220.21	190.73	197.39	206.62	197.75	175.91	0.149	-0.053	-0.005	0.059	-0.003	-0.167	0.953494	1.000000	-
Rv0256c	PPE2	32	135.70	135.51	148.95	221.33	199.93	124.63	-0.239	-0.241	-0.109	0.447	0.304	-0.357	0.011171	0.197221	-
Rv0257	-	3	276.41	303.16	257.09	297.92	289.97	205.16	0.025	0.156	-0.078	0.131	0.093	-0.396	0.835689	1.000000	-
Rv0258c	-	8	61.09	51.67	54.62	33.79	61.57	64.32	0.151	-0.071	0.003	-0.617	0.162	0.220	0.685069	1.000000	-
Rv0259c	-	8	108.17	111.47	71.18	81.28	97.79	92.80	0.196	0.238	-0.375	-0.195	0.057	-0.014	0.641343	1.000000	-
Rv0260c	-	22	100.89	112.30	101.14	100.31	87.53	92.58	0.024	0.172	0.028	0.016	-0.170	-0.094	0.956727	1.000000	-
Rv0261c	narK3	25	115.50	93.04	116.24	100.46	101.45	102.01	0.134	-0.163	0.143	-0.058	-0.044	-0.037	0.655341	1.000000	-
Rv0262c	aac	7	136.58	130.93	142.71	150.09	133.11	127.50	-0.002	-0.061	0.059	0.129	-0.038	-0.098	0.951037	1.000000	-
Rv0263c	-	16	72.76	92.77	80.33	59.82	75.94	82.56	-0.083	0.247	0.051	-0.346	-0.025	0.088	0.662861	1.000000	-
Rv0264c	-	10	197.79	175.77	198.77	159.80	185.90	159.64	0.135	-0.030	0.142	-0.164	0.048	-0.165	0.615480	1.000000	-
Rv0265c	-	9	169.37	194.83	143.05	179.35	178.02	177.01	-0.035	0.162	-0.271	0.046	0.035	0.027	0.916165	1.000000	-
Rv0266c	oplA	42	269.77	252.52	252.24	237.04	236.92	241.40	0.117	0.024	0.022	-0.066	-0.066	-0.040	0.888598	1.000000	-
Rv0267	narU	15	193.09	191.68	178.30	173.34	186.33	208.04	0.034	0.024	-0.078	-0.117	-0.016	0.139	0.955879	1.000000	-
Rv0268c	-	13	339.87	333.57	325.37	337.60	315.80	335.96	0.036	0.009	-0.026	0.027	-0.068	0.020	0.998725	1.000000	-
Rv0269c	-	11	300.25	297.47	258.84	247.22	249.43	256.19	0.160	0.147	-0.050	-0.115	-0.103	-0.065	0.954321	1.000000	-
Rv0270	fadD2	25	302.29	162.58	303.61	82.28	143.95	118.49	0.690	-0.185	0.696	-1.126	-0.355	-0.626	0.000000	0.000000	-
Rv0271c	fadE6	34	192.14	203.63	199.40	198.94	196.97	198.85	-0.045	0.037	0.008	0.004	-0.010	0.004	0.998932	1.000000	-
Rv0272c	-	16	73.38	84.05	81.86	73.85	72.24	83.55	-0.085	0.099	0.063	-0.077	-0.106	0.091	0.983048	1.000000	-
Rv0273c	-	17	145.70	130.28	123.90	118.06	130.77	128.26	0.164	0.008	-0.061	-0.128	0.014	-0.013	0.971357	1.000000	-
Rv0274	-	8	83.85	81.98	76.27	78.02	69.76	75.63	0.105	0.075	-0.023	0.008	-0.144	-0.035	0.996557	1.000000	-
Rv0275c	-	9	96.32	108.53	116.17	110.10	95.57	113.02	-0.140	0.024	0.118	0.044	-0.150	0.080	0.979683	1.000000	-
Rv0276	-	17	161.75	163.54	141.01	165.70	173.28	189.51	-0.035	-0.019	-0.226	-0.001	0.062	0.188	0.780062	1.000000	-
Rv0277c	-	6	144.62	120.67	122.74	124.57	127.83	127.86	0.169	-0.082	-0.059	-0.038	-0.002	-0.002	0.995858	1.000000	-
Rv0278c	PE_PGRS3	26	291.76	276.46	284.53	271.87	236.92	240.40	0.126	0.049	0.090	0.026	-0.169	-0.148	0.868461	1.000000	-
Rv0279c	PE_PGRS4	19	330.25	289.38	326.24	272.73	255.16	272.18	0.180	-0.008	0.162	-0.092	-0.186	-0.095	0.529086	1.000000	-
Rv0280	PPE3	26	119.43	259.75	119.86	322.77	299.29	230.20	-0.888	0.202	-0.883	0.510	0.402	0.031	0.000002	0.000082	-
Rv0281	-	14	382.59	405.00	392.13	390.74	367.18	395.62	-0.023	0.058	0.012	0.007	-0.082	0.024	0.996911	1.000000	-
Rv0282	-	24	2.33	1.27	0.52	0.20	0.00	4.40	0.183	-0.041	-0.224	-0.312	-0.368	0.543	0.000884	0.021641	-
Rv0283	-	24	1.09	0.21	0.00	0.00	0.38	1.29	0.149	-0.077	-0.136	-0.136	-0.032	0.195	0.082503	0.920631	-
Rv0284	-	61	0.57	0.00	0.00	0.08	0.00	1.61	0.051	-0.105	-0.105	-0.082	-0.105	0.298	0.000004	0.000173	-
Rv0285	PE5	5	0.00	0.00	0.00	0.00	0.00	2.02	-0.094	-0.094	-0.094	-0.094	-0.094	0.396	0.026986	0.385930	-
Rv0286	PPE4	31	9.10	2.30	2.83	45.85	54.47	40.15	-1.126	-2.076	-1.975	0.724	0.950	0.553	0.000000	0.000010	-
Rv0287	esxG	5	16.43	8.20	12.50	0.00	0.00	2.96	0.875	0.176	0.583	-1.224	-1.224	-0.553	0.210072	1.000000	-
Rv0288	esxH	7	1.08	0.00	0.00	0.00	0.00	2.69	0.111	-0.170	-0.170	-0.170	-0.170	0.450	0.125741	1.000000	-
Rv0289	-	13	3.58	4.74	0.00	0.00	0.00	7.56	0.166	0.349	-0.613	-0.613	-0.613	0.716	0.001869	0.042864	-
Rv0290	-	19	1.55	0.26	0.00	0.00	0.00	5.88	0.060	-0.255	-0.329	-0.329	-0.329	0.792	0.000010	0.000363	-
Rv0291	mycP3	13	32.06	3.19	1.68	0.38	0.69	25.69	1.247	-0.931	-1.226	-1.537	-1.456	0.975	0.000000	0.000006	-
Rv0292	-	17	20.63	5.41	4.59	3.61	4.73	17.32	0.833	-0.466	-0.585	-0.740	-0.564	0.634	0.002823	0.060555	-
Rv0293c	-	27	202.05	238.20	189.34	240.26	191.92	224.89	-0.084	0.148	-0.175	0.160	-0.156	0.067	0.769561	1.000000	-
Rv0294	tam	14	170.86	225.18	193.70	210.41	224.16	203.72	-0.254	0.135	-0.078	0.039	0.128	-0.007	0.912764	1.000000	-
Rv0295c	-	10	233.04	212.44	225.96	205.87	191.16	262.69	0.069	-0.061	0.026	-0.105	-0.210	0.239	0.927587	1.000000	-
Rv0296c	-	42	152.95	145.14	142.26	157.22	151.84	153.00	0.023	-0.050	-0.078	0.062	0.013	0.024	0.993104	1.000000	-
Rv0297	PE_PGRS5	14	253.52	227.47	248.70	231.98	213.36	216.60	0.126	-0.027	0.099	0.000	-0.118	-0.097	0.986932	1.000000	-
Rv0298	-	5	327.07	312.66	288.59	341.87	326.45	272.43	0.069	0.005	-0.108	0.132	0.067	-0.190	0.989381	1.000000	-
Rv0299	-	2	616.56	700.64	595.23	494.88	438.58	343.29	0.212	0.395	0.162	-0.102	-0.274	-0.623	0.736716	1.000000	-
Rv0300	-	5	315.49	372.16	346.05	326.56	305.20	330.42	-0.075	0.160	0.056	-0.026	-0.122	-0.010	0.989586	1.000000	-
Rv0301	-	7	403.44	401.04	369.07	352.76	349.84	365.66	0.109	0.101	-0.017	-0.082	-0.094	-0.031	0.979799	1.000000	-
Rv0302	-	8	250.89	261.13	274.40	223.88	242.47	243.23	0.009	0.065	0.136	-0.152	-0.039	-0.035	0.943669	1.000000	-
Rv0303	-	12	252.08	257.47	209.89	233.59	268.53	267.37	0.022	0.052	-0.236	-0.085	0.112	0.106	0.759779	1.000000	-
Rv0304c	PPE5	136	90.74	95.04	83.55	92.18	98.83	104.15	-0.049	0.014	-0.162	-0.028	0.068	0.140	0.545754	1.000000	-
Rv0305c	PPE6	60	61.43	66.74	62.89	71.61	70.11	74.40	-0.133	-0.022	-0.102	0.072	0.044	0.124	0.829248	1.000000	-
Rv0306	-	8	334.99	289.90	330.96	327.48	306.95	322.51	0.070	-0.135	0.053	0.038	-0.054	0.016	0.998871	1.000000	-
Rv0307c	-	9	191.04	204.22	195.29	156.29	173.59	203.10	0.028	0.122	0.059	-0.253	-0.106	0.114	0.865505	1.000000	-
Rv0308	-	15	142.72	174.64	164.80	155.30	164.79	175.85	-0.186	0.097	0.015	-0.068	0.015	0.106	0.901774	1.000000	-
Rv0309	-	12	102.63	122.04	123.20	108.55	121.23	121.30	-0.175	0.064	0.077	-0.098	0.055	0.056	0.962672	1.000000	-
Rv0310c	-	12	76.78	67.89	86.68	73.42	85.29	82.44	-0.034	-0.200	0.131	-0.095	0.108	0.062	0.956234	1.000000	-
Rv0311	-	17	91.15	102.07	77.58	85.77	88.25	93.91	0.021	0.176	-0.199	-0.063	-0.024	0.061	0.948045	1.000000	-
Rv0312	-	22	32.96	36.27	46.33	48.18	31.83	37.97	-0.210	-0.090	0.225	0.276	-0.254	-0.032	0.639969	1.000000	-
Rv0313	-	5	511.62	531.54	463.23	508.47	510.56	521.42	0.011	0.065	-0.131	0.002	0.008	0.038	0.999209	1.000000	-
Rv0314c	-	7	397.39	341.30	297.55	326.70	265.37	329.32	0.281	0.064	-0.131	0.002	-0.293	0.013	0.740204	1.000000	-
Rv0315	-	10	228.63	243.52	237.42	262.41	235.30	223.54	-0.060	0.030	-0.006	0.135	-0.019	-0.091	0.998897	1.000000	-
Rv0316	-	8	380.51	293.90	309.60	264.61	288.15	252.75	0.346	-0.021	0.053	-0.170	-0.049	-0.235	0.899789	1.000000	-
Rv0317c	glpQ2	13	388.45	335.52	370.98	352.82	337.34	328.79	0.139	-0.069	0.073	0.002	-0.062	-0.098	0.977201	1.000000	-
Rv0318c	-	8	281.03	298.06	259.43	272.62	273.56	285.90	0.013	0.097	-0.100	-0.030	-0.025	0.038	0.998831	1.000000	-
Rv0319	pcp	8	216.08	212.43	170.34	222.14	181.97	223.96	0.078	0.054	-0.257	0.117	-0.164	0.128	0.967482	1.000000	-
Rv0320	-	16	186.75	183.79	168.13	167.01	185.91	194.38	0.044	0.022	-0.103	-0.113	0.038	0.100	0.974314	1.000000	-
Rv0321	dcd	6	198.20	236.41	190.85	198.64	172.31	161.40	0.038	0.286	-0.016	0.041	-0.159	-0.251	0.922320	1.000000	-
Rv0322	udgA	24	126.89	128.94	117.94	129.14	135.79	136.25	-0.025	-0.002	-0.126	-0.000	0.070	0.074	0.987973	1.000000	-
Rv0323c	-	12	245.67	236.64	228.52	197.63	224.39	191.92	0.151	0.098	0.049	-0.156	0.023	-0.197	0.920387	1.000000	-
Rv0324	-	12	262.55	254.00	263.22	282.20	278.74	227.73	0.006	-0.041	0.010	0.108	0.091	-0.195	0.943383	1.000000	-
Rv0325	-	6	240.64	186.97	234.93	203.81	206.50	210.33	0.167	-0.189	0.133	-0.068	-0.049	-0.024	0.974604	1.000000	-
Rv0326	-	9	151.15	150.06	168.78	164.47	175.45	156.59	-0.089	-0.099	0.065	0.029	0.120	-0.040	0.997482	1.000000	-
Rv0327c	cyp135A1	24	48.90	52.04	52.82	52.54	58.31	59.92	-0.133	-0.051	-0.031	-0.038	0.100	0.136	0.970624	1.000000	-
Rv0328	-	11	251.38	223.20	216.82	177.46	174.49	188.64	0.286	0.118	0.077	-0.205	-0.229	-0.119	0.726283	1.000000	-
Rv0329c	-	9	219.79	244.59	217.09	219.07	190.66	217.48	0.011	0.162	-0.007	0.006	-0.189	-0.004	0.994349	1.000000	-
Rv0330c	-	9	307.76	307.42	295.52	302.12	295.63	316.96	0.016	0.015	-0.041	-0.010	-0.041	0.058	0.999967	1.000000	-
Rv0331	-	18	147.17	139.20	127.50	138.55	132.56	130.43	0.111	0.033	-0.089	0.027	-0.035	-0.057	0.993632	1.000000	-
Rv0332	-	12	251.28	251.23	246.21	232.83	257.88	238.02	0.029	0.028	-0.000	-0.079	0.065	-0.048	0.998222	1.000000	-
Rv0333	-	4	194.33	189.51	184.66	222.55	184.09	183.01	0.010	-0.026	-0.062	0.200	-0.067	-0.075	0.998321	1.000000	-
Rv0334	rmlA	19	0.00	0.00	0.82	0.26	0.24	0.25	-0.073	-0.073	0.145	-0.000	-0.006	-0.003	0.612630	1.000000	-
Rv0335c	PE6	2	44.25	63.57	62.52	44.62	67.20	28.05	-0.203	0.274	0.252	-0.193	0.349	-0.779	0.857999	1.000000	-
Rv0336	-	18	321.72	310.74	322.01	328.99	310.83	297.61	0.029	-0.021	0.030	0.060	-0.020	-0.082	0.998820	1.000000	-
Rv0337c	aspC	22	102.17	111.24	84.66	119.52	109.10	113.90	-0.061	0.057	-0.318	0.156	0.030	0.089	0.801668	1.000000	-
Rv0338c	-	37	30.23	6.60	32.88	1.15	0.76	12.04	0.895	-0.708	1.000	-1.622	-1.718	-0.153	0.000003	0.000121	-
Rv0339c	-	30	134.67	163.52	156.29	153.10	165.05	150.11	-0.185	0.086	0.023	-0.006	0.099	-0.034	0.888385	1.000000	-
Rv0340	-	5	42.98	49.94	44.97	59.37	85.91	59.69	-0.373	-0.178	-0.315	0.051	0.549	0.058	0.769834	1.000000	-
Rv0341	iniB	19	124.03	133.30	153.22	123.47	110.08	127.84	-0.051	0.049	0.243	-0.057	-0.216	-0.009	0.751467	1.000000	-
Rv0342	iniA	27	133.85	170.26	140.40	157.57	155.25	162.60	-0.189	0.147	-0.123	0.038	0.018	0.082	0.834178	1.000000	-
Rv0343	iniC	13	209.67	164.71	181.87	165.81	197.43	159.48	0.216	-0.123	0.016	-0.114	0.131	-0.168	0.830220	1.000000	-
Rv0344c	lpqJ	12	236.29	207.95	186.86	190.81	182.71	202.82	0.226	0.046	-0.104	-0.075	-0.136	0.011	0.811448	1.000000	-
Rv0345	-	7	317.49	239.61	252.73	249.45	239.63	268.40	0.277	-0.122	-0.047	-0.065	-0.122	0.038	0.799357	1.000000	-
Rv0346c	ansP2	29	200.50	129.29	183.20	89.80	108.37	116.46	0.524	-0.090	0.397	-0.592	-0.334	-0.235	0.000000	0.000001	-
Rv0347	-	18	40.38	41.70	38.71	27.49	29.03	27.86	0.211	0.253	0.157	-0.271	-0.204	-0.254	0.986595	1.000000	-
Rv0348	-	18	23.36	39.61	19.82	27.42	29.14	27.45	-0.210	0.444	-0.402	-0.017	0.058	-0.015	0.381493	1.000000	-
Rv0349	-	8	180.09	155.13	135.20	127.54	142.53	187.53	0.213	0.004	-0.188	-0.269	-0.114	0.270	0.418187	1.000000	-
Rv0350	dnaK	17	0.99	0.89	0.37	0.29	0.43	0.59	0.099	0.075	-0.059	-0.081	-0.044	0.000	0.844421	1.000000	-
Rv0351	grpE	9	6.19	15.21	10.45	7.52	9.33	8.80	-0.383	0.471	0.083	-0.220	-0.025	-0.080	0.951147	1.000000	-
Rv0352	dnaJ1	14	53.81	94.10	44.70	83.48	89.50	61.28	-0.373	0.380	-0.616	0.217	0.312	-0.200	0.066040	0.786571	-
Rv0353	hspR	6	523.08	411.73	514.75	687.55	589.04	390.44	0.010	-0.332	-0.013	0.401	0.180	-0.407	0.347441	1.000000	-
Rv0354c	PPE7	5	44.49	49.91	45.22	37.52	55.43	67.37	-0.152	-0.002	-0.131	-0.371	0.136	0.396	0.405497	1.000000	-
Rv0355c	PPE8	172	74.56	83.20	71.96	78.06	78.87	82.95	-0.066	0.083	-0.114	-0.004	0.010	0.079	0.868223	1.000000	-
Rv0356c	-	9	146.79	213.49	190.53	169.50	167.56	192.99	-0.287	0.239	0.079	-0.085	-0.102	0.097	0.714331	1.000000	-
Rv0357c	purA	24	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv0358	-	13	46.07	57.00	55.94	18.74	21.37	36.77	0.205	0.485	0.460	-0.900	-0.749	-0.085	0.000042	0.001377	-
Rv0359	-	11	363.88	354.64	419.71	353.83	383.37	387.32	-0.051	-0.088	0.152	-0.091	0.023	0.038	0.975683	1.000000	-
Rv0360c	-	9	507.53	411.13	441.56	415.17	415.47	366.47	0.249	-0.051	0.050	-0.037	-0.036	-0.215	0.854740	1.000000	-
Rv0361	-	8	149.98	196.98	141.38	199.59	211.16	191.87	-0.270	0.112	-0.352	0.131	0.210	0.076	0.606261	1.000000	-
Rv0362	mgtE	16	459.01	360.62	383.25	367.44	331.95	336.73	0.295	-0.049	0.038	-0.022	-0.167	-0.146	0.771085	1.000000	-
Rv0363c	fba	17	14.50	16.12	19.03	14.55	26.01	13.42	-0.192	-0.076	0.110	-0.188	0.478	-0.274	0.244920	1.000000	-
Rv0364	-	13	7.26	12.48	7.72	10.11	3.96	8.15	-0.115	0.396	-0.062	0.186	-0.568	-0.014	0.901710	1.000000	-
Rv0365c	-	20	394.55	386.68	349.47	391.57	369.85	367.23	0.066	0.038	-0.106	0.056	-0.026	-0.036	0.987227	1.000000	-
Rv0366c	-	6	236.20	266.05	314.36	259.09	240.94	277.39	-0.166	0.002	0.239	-0.036	-0.138	0.061	0.864887	1.000000	-
Rv0367c	-	2	103.12	119.55	112.07	109.50	105.05	47.23	0.050	0.254	0.165	0.133	0.076	-1.000	0.510702	1.000000	-
Rv0368c	-	17	312.37	334.17	334.92	293.09	289.01	310.58	0.000	0.096	0.099	-0.090	-0.110	-0.008	0.906376	1.000000	-
Rv0369c	-	7	107.85	68.07	87.18	95.37	95.82	74.91	0.276	-0.351	-0.016	0.107	0.113	-0.222	0.551677	1.000000	-
Rv0370c	-	21	80.65	60.05	63.39	51.29	48.76	46.84	0.432	0.035	0.107	-0.174	-0.240	-0.292	0.162776	1.000000	-
Rv0371c	-	7	80.12	63.33	71.03	50.53	65.09	55.00	0.299	-0.018	0.136	-0.317	0.019	-0.205	0.785627	1.000000	-
Rv0372c	-	6	103.30	65.61	109.45	122.74	97.29	90.85	0.069	-0.548	0.149	0.308	-0.013	-0.107	0.835463	1.000000	-
Rv0373c	-	38	95.76	97.66	109.70	103.34	91.33	104.42	-0.065	-0.038	0.122	0.040	-0.129	0.054	0.862471	1.000000	-
Rv0374c	-	6	71.00	88.49	104.56	93.76	104.49	85.46	-0.341	-0.043	0.186	0.036	0.185	-0.090	0.748789	1.000000	-
Rv0375c	-	8	104.80	73.26	134.54	113.52	104.93	105.27	-0.016	-0.505	0.329	0.094	-0.015	-0.010	0.956476	1.000000	-
Rv0376c	-	21	106.11	94.77	143.31	95.52	102.42	126.86	-0.068	-0.224	0.348	-0.213	-0.117	0.179	0.361714	1.000000	-
Rv0377	-	9	116.28	130.62	109.79	165.59	113.90	87.18	-0.050	0.111	-0.129	0.442	-0.079	-0.446	0.258991	1.000000	-
Rv0378	-	3	118.35	150.48	99.98	133.06	91.75	135.86	-0.037	0.297	-0.270	0.125	-0.388	0.154	0.983362	1.000000	-
Rv0379	secE2	3	278.52	287.58	199.38	248.95	195.22	314.73	0.130	0.176	-0.342	-0.029	-0.372	0.304	0.499377	1.000000	-
Rv0380c	-	10	220.59	232.43	257.90	213.19	200.16	205.69	-0.007	0.067	0.214	-0.055	-0.144	-0.105	0.885447	1.000000	-
Rv0381c	-	17	200.68	238.24	185.63	316.20	304.81	217.89	-0.275	-0.033	-0.385	0.368	0.316	-0.159	0.015157	0.249911	-
Rv0382c	pyrE	12	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv0383c	-	9	95.80	74.44	85.76	85.44	49.82	67.51	0.307	-0.036	0.156	0.151	-0.571	-0.168	0.980953	1.000000	-
Rv0384c	clpB	25	16.68	61.92	26.01	43.27	58.51	40.57	-1.090	0.536	-0.574	0.065	0.460	-0.018	0.000000	0.000000	-
Rv0385	-	19	435.64	419.83	412.31	413.16	364.59	341.57	0.129	0.077	0.051	0.054	-0.124	-0.217	0.852411	1.000000	-
Rv0386	-	44	251.17	214.44	226.70	245.81	225.55	211.66	0.129	-0.094	-0.016	0.099	-0.023	-0.112	0.876205	1.000000	-
Rv0387c	-	14	128.27	138.26	129.32	124.85	155.24	109.33	-0.028	0.076	-0.017	-0.065	0.238	-0.249	0.885884	1.000000	-
Rv0388c	PPE9	10	42.53	32.14	38.83	43.34	44.68	43.85	0.051	-0.305	-0.066	0.075	0.114	0.090	0.971642	1.000000	-
Rv0389	purT	9	313.07	333.46	365.55	312.57	281.04	339.39	-0.050	0.040	0.171	-0.052	-0.203	0.065	0.897067	1.000000	-
Rv0390	-	8	294.12	285.42	278.21	257.38	260.30	248.60	0.118	0.075	0.039	-0.071	-0.055	-0.120	0.950036	1.000000	-
Rv0391	metZ	21	86.26	89.98	78.07	88.12	83.79	93.42	-0.005	0.052	-0.141	0.024	-0.045	0.103	0.984038	1.000000	-
Rv0392c	ndhA	16	162.20	198.51	177.42	189.05	174.66	175.58	-0.143	0.141	-0.017	0.072	-0.039	-0.032	0.940192	1.000000	-
Rv0393	-	10	330.63	308.07	342.57	352.94	375.24	314.29	-0.028	-0.129	0.022	0.064	0.152	-0.100	0.971331	1.000000	-
Rv0394c	-	10	170.70	190.74	189.06	177.47	177.71	191.17	-0.096	0.060	0.047	-0.042	-0.040	0.063	0.994710	1.000000	-
Rv0395	-	7	135.21	165.07	138.46	140.01	113.23	104.78	0.025	0.304	0.058	0.074	-0.221	-0.328	0.897541	1.000000	-
Rv0396	-	5	30.25	22.40	11.94	14.05	34.12	25.40	0.331	-0.033	-0.726	-0.557	0.481	0.117	0.627969	1.000000	-
Rv0397	-	3	214.49	231.53	221.71	215.34	272.49	208.67	-0.082	0.026	-0.036	-0.077	0.256	-0.121	0.998761	1.000000	-
Rv0398c	-	5	123.49	116.36	151.72	116.12	158.44	115.49	-0.074	-0.157	0.212	-0.159	0.273	-0.167	0.885354	1.000000	-
Rv0399c	lpqK	24	57.35	69.89	61.82	59.62	70.30	60.69	-0.131	0.133	-0.031	-0.079	0.141	-0.056	0.902960	1.000000	-
Rv0400c	fadE7	10	93.12	66.17	99.55	84.18	51.53	73.49	0.241	-0.222	0.333	0.103	-0.554	-0.081	0.102185	1.000000	-
Rv0401	-	3	75.46	97.08	112.80	83.24	93.43	64.05	-0.204	0.139	0.346	-0.071	0.087	-0.425	0.399302	1.000000	-
Rv0402c	mmpL1	55	102.81	84.80	87.09	95.61	84.94	97.67	0.150	-0.113	-0.077	0.050	-0.111	0.080	0.514749	1.000000	-
Rv0403c	mmpS1	7	68.38	86.03	87.10	87.58	102.52	126.31	-0.417	-0.106	-0.089	-0.082	0.134	0.422	0.224294	1.000000	-
Rv0404	fadD30	87	16.68	19.46	19.13	16.71	17.51	21.67	-0.118	0.056	0.037	-0.116	-0.064	0.181	0.629925	1.000000	-
Rv0405	pks6	123	39.83	48.61	42.93	42.12	43.49	43.84	-0.113	0.146	-0.016	-0.041	0.000	0.011	0.964843	1.000000	-
Rv0406c	-	14	186.47	219.35	183.62	224.90	184.17	197.14	-0.093	0.135	-0.115	0.170	-0.111	-0.015	0.925298	1.000000	-
Rv0407	fgd1	20	194.29	195.24	201.77	184.29	185.48	215.86	-0.013	-0.007	0.040	-0.088	-0.079	0.135	0.955667	1.000000	-
Rv0408	pta	43	140.42	121.74	143.72	128.16	121.08	124.19	0.109	-0.090	0.141	-0.019	-0.097	-0.062	0.848353	1.000000	-
Rv0409	ackA	17	45.42	41.00	45.34	42.28	41.50	52.00	0.024	-0.108	0.022	-0.069	-0.093	0.201	0.948937	1.000000	-
Rv0410c	pknG	31	33.48	79.47	31.30	53.58	73.80	48.02	-0.599	0.536	-0.683	0.008	0.435	-0.136	0.000152	0.004427	-
Rv0411c	glnH	9	25.72	47.09	40.20	35.15	49.04	41.64	-0.544	0.217	0.013	-0.158	0.270	0.058	0.259374	1.000000	-
Rv0412c	-	23	54.29	124.06	36.16	78.47	103.40	81.99	-0.515	0.607	-1.042	-0.022	0.355	0.038	0.000000	0.000014	-
Rv0413	mutT3	7	208.71	222.55	182.39	252.99	230.15	227.47	-0.079	0.012	-0.268	0.193	0.059	0.043	0.953830	1.000000	-
Rv0414c	thiE	10	28.28	27.60	18.75	21.29	22.93	20.19	0.240	0.211	-0.246	-0.100	-0.013	-0.161	0.996151	1.000000	-
Rv0415	thiO	12	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv0416	thiS	4	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv0417	thiG	15	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv0418	lpqL	28	105.53	120.51	128.66	117.26	123.17	109.83	-0.148	0.035	0.126	-0.003	0.065	-0.093	0.818054	1.000000	-
Rv0419	lpqM	22	83.50	73.68	72.55	68.73	59.97	76.26	0.193	0.023	0.002	-0.071	-0.254	0.069	0.631716	1.000000	-
Rv0420c	-	9	253.86	257.28	241.19	268.90	234.00	245.40	0.021	0.040	-0.051	0.103	-0.094	-0.027	0.996732	1.000000	-
Rv0421c	-	10	108.08	84.75	105.73	97.54	73.71	97.00	0.185	-0.148	0.155	0.044	-0.338	0.036	0.978927	1.000000	-
Rv0422c	thiD	14	0.67	1.78	0.90	0.00	0.84	0.39	-0.024	0.235	0.034	-0.205	0.019	-0.098	0.259082	1.000000	-
Rv0423c	thiC	22	7.19	3.95	7.95	1.27	2.26	3.11	0.392	-0.054	0.480	-0.566	-0.355	-0.196	0.263954	1.000000	-
Rv0424c	-	8	65.61	61.19	64.16	51.12	66.58	84.50	0.002	-0.092	-0.028	-0.330	0.021	0.344	0.742475	1.000000	-
Rv0425c	ctpH	41	155.76	157.40	163.24	169.96	163.00	135.10	-0.015	-0.000	0.051	0.107	0.049	-0.213	0.830691	1.000000	-
Rv0426c	-	2	197.22	206.00	235.39	173.24	151.13	216.56	0.005	0.066	0.254	-0.178	-0.369	0.136	0.829005	1.000000	-
Rv0427c	xthA	13	173.06	203.00	175.30	171.99	156.54	173.36	-0.020	0.204	-0.002	-0.029	-0.160	-0.018	0.638455	1.000000	-
Rv0428c	-	16	109.78	93.71	92.93	88.88	94.52	119.11	0.131	-0.087	-0.098	-0.159	-0.075	0.244	0.473939	1.000000	-
Rv0429c	def	9	0.61	0.00	0.00	0.00	0.00	0.00	0.136	-0.029	-0.029	-0.029	-0.029	-0.029	0.605764	1.000000	-
Rv0430	-	3	1.29	0.00	0.00	0.00	0.00	0.00	0.270	-0.061	-0.061	-0.061	-0.061	-0.061	0.621887	1.000000	-
Rv0431	-	10	57.96	125.67	73.46	109.07	115.21	89.06	-0.669	0.385	-0.351	0.189	0.265	-0.089	0.140169	1.000000	-
Rv0432	sodC	12	283.11	286.90	259.94	241.59	230.19	255.94	0.123	0.142	0.002	-0.102	-0.170	-0.020	0.836110	1.000000	-
Rv0433	-	23	220.09	195.44	222.25	183.64	174.92	184.82	0.157	-0.010	0.171	-0.098	-0.166	-0.089	0.888067	1.000000	-
Rv0434	-	13	259.96	190.95	221.03	199.21	224.22	215.44	0.246	-0.190	0.016	-0.130	0.037	-0.020	0.884768	1.000000	-
Rv0435c	-	23	254.09	244.63	240.35	218.29	238.57	231.31	0.093	0.040	0.015	-0.121	0.004	-0.040	0.967089	1.000000	-
Rv0436c	pssA	17	244.84	275.13	196.90	231.23	233.46	244.19	0.042	0.207	-0.265	-0.039	-0.025	0.038	0.666674	1.000000	-
Rv0437c	psd	8	208.76	282.45	173.09	191.60	238.19	205.81	-0.052	0.375	-0.316	-0.173	0.134	-0.072	0.885279	1.000000	-
Rv0438c	moeA2	14	231.06	181.47	209.56	180.11	194.76	218.34	0.186	-0.155	0.048	-0.165	-0.055	0.106	0.777674	1.000000	-
Rv0439c	-	19	261.63	227.23	247.73	233.94	197.19	211.96	0.182	-0.017	0.105	0.024	-0.217	-0.115	0.962147	1.000000	-
Rv0440	groEL	13	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv0441c	-	9	142.79	161.03	153.04	170.14	145.58	172.05	-0.136	0.032	-0.040	0.109	-0.109	0.124	0.958381	1.000000	-
Rv0442c	PPE10	24	186.13	197.13	203.53	182.93	188.14	191.10	-0.040	0.041	0.086	-0.064	-0.025	-0.003	0.999111	1.000000	-
Rv0443	-	14	116.67	137.04	136.77	143.14	141.39	126.63	-0.188	0.035	0.033	0.096	0.079	-0.075	0.860895	1.000000	-
Rv0444c	-	9	181.70	185.31	159.68	181.48	169.81	157.09	0.073	0.100	-0.108	0.071	-0.022	-0.131	0.986569	1.000000	-
Rv0445c	sigK	10	247.66	250.22	236.06	258.69	293.73	280.84	-0.075	-0.061	-0.143	-0.014	0.166	0.103	0.944412	1.000000	-
Rv0446c	-	17	96.80	114.47	108.39	116.70	127.34	119.78	-0.224	0.007	-0.069	0.033	0.154	0.069	0.838702	1.000000	-
Rv0447c	ufaA1	27	225.52	253.83	228.48	234.01	230.45	216.12	-0.036	0.131	-0.018	0.016	-0.006	-0.096	0.975021	1.000000	-
Rv0448c	-	16	216.93	206.54	211.56	212.61	204.55	199.34	0.055	-0.014	0.020	0.027	-0.028	-0.064	0.999378	1.000000	-
Rv0449c	-	23	212.71	198.70	213.99	204.82	212.79	189.91	0.049	-0.047	0.057	-0.005	0.049	-0.111	0.997894	1.000000	-
Rv0450c	mmpL4	84	35.89	48.14	60.14	58.63	65.78	46.05	-0.490	-0.112	0.182	0.148	0.301	-0.170	0.003813	0.078426	-
Rv0451c	mmpS4	15	0.26	0.00	0.00	0.29	0.48	0.36	0.007	-0.065	-0.065	0.016	0.068	0.035	0.858638	1.000000	-
Rv0452	-	10	174.20	183.56	164.48	185.49	192.15	188.96	-0.057	0.016	-0.138	0.031	0.080	0.057	0.991450	1.000000	-
Rv0453	PPE11	23	221.72	220.75	182.46	215.02	206.88	214.82	0.075	0.069	-0.200	0.031	-0.023	0.030	0.954342	1.000000	-
Rv0454	-	6	324.17	330.45	275.44	326.82	346.95	312.06	0.021	0.049	-0.210	0.033	0.118	-0.033	0.996466	1.000000	-
Rv0455c	-	11	0.00	0.93	10.01	83.37	100.58	0.43	-2.909	-2.663	-1.323	1.235	1.491	-2.791	0.000000	0.000000	-
Rv0456c	echA2	11	119.35	134.22	124.81	148.33	130.20	127.01	-0.126	0.037	-0.063	0.177	-0.005	-0.039	0.831498	1.000000	-
Rv0456A	-	4	182.11	200.41	195.96	190.79	197.63	212.15	-0.107	0.028	-0.004	-0.042	0.008	0.108	0.998602	1.000000	-
Rv0457c	-	38	124.32	135.53	127.17	132.99	129.49	126.51	-0.055	0.065	-0.023	0.039	0.002	-0.031	0.997714	1.000000	-
Rv0458	-	23	156.41	150.68	142.53	155.28	156.32	155.28	0.033	-0.019	-0.097	0.023	0.032	0.023	0.997983	1.000000	-
Rv0459	-	5	218.88	170.94	195.80	196.63	189.53	198.33	0.163	-0.185	0.006	0.012	-0.040	0.024	0.985007	1.000000	-
Rv0460	-	3	160.80	166.88	101.13	117.14	152.18	166.44	0.153	0.205	-0.490	-0.288	0.076	0.201	0.122091	1.000000	-
Rv0461	-	16	203.52	178.17	162.39	187.06	201.21	207.70	0.097	-0.090	-0.220	-0.022	0.081	0.125	0.917018	1.000000	-
Rv0462	lpd	27	3.15	11.09	4.18	0.70	0.97	5.53	-0.186	0.796	-0.014	-0.702	-0.634	0.183	0.000000	0.000000	-
Rv0463	-	4	224.28	180.64	235.83	215.01	300.57	249.95	-0.062	-0.367	0.009	-0.122	0.352	0.091	0.926354	1.000000	-
Rv0464c	-	15	101.84	143.31	121.39	142.88	147.94	127.35	-0.346	0.127	-0.103	0.123	0.172	-0.037	0.736048	1.000000	-
Rv0465c	-	28	203.78	226.17	202.66	191.30	169.77	221.61	0.009	0.156	0.001	-0.080	-0.248	0.127	0.605708	1.000000	-
Rv0466	-	8	122.02	182.38	145.03	134.92	132.31	149.52	-0.234	0.327	0.006	-0.094	-0.121	0.049	0.836246	1.000000	-
Rv0467	icl	18	377.18	82.71	345.62	115.62	98.19	82.50	1.019	-1.105	0.894	-0.645	-0.870	-1.108	0.000000	0.000000	-
Rv0468	fadB2	13	57.01	56.41	61.89	46.78	49.75	64.29	0.023	0.009	0.133	-0.237	-0.157	0.183	0.969439	1.000000	-
Rv0469	umaA	24	45.43	54.72	50.97	59.28	53.65	60.47	-0.229	0.015	-0.078	0.121	-0.011	0.148	0.864006	1.000000	-
Rv0470c	pcaA	12	82.11	159.77	79.56	175.72	186.86	134.86	-0.700	0.220	-0.743	0.353	0.439	-0.017	0.002719	0.058652	-
Rv0470A	-	11	578.52	559.85	509.12	490.55	492.37	502.12	0.147	0.100	-0.036	-0.089	-0.084	-0.056	0.944380	1.000000	-
Rv0471c	-	12	575.75	529.88	532.62	529.97	486.53	518.97	0.121	0.002	0.010	0.003	-0.119	-0.027	0.995115	1.000000	-
Rv0472c	-	10	89.16	143.79	76.66	65.69	80.22	155.09	-0.181	0.479	-0.387	-0.595	-0.325	0.584	0.009479	0.176704	-
Rv0473	-	16	322.11	290.59	242.03	262.64	253.79	269.61	0.232	0.086	-0.173	-0.057	-0.106	-0.020	0.923913	1.000000	-
Rv0474	-	7	352.52	359.67	324.02	351.78	344.83	369.21	0.009	0.037	-0.111	0.006	-0.023	0.075	0.995382	1.000000	-
Rv0475	hbhA	9	293.40	283.07	254.62	270.13	250.13	295.62	0.094	0.044	-0.106	-0.023	-0.132	0.105	0.957238	1.000000	-
Rv0476	-	6	254.22	260.54	251.86	250.11	247.22	237.67	0.022	0.057	0.009	-0.001	-0.017	-0.073	0.999749	1.000000	-
Rv0477	-	5	570.42	503.82	582.84	458.62	466.49	472.32	0.163	-0.015	0.193	-0.149	-0.125	-0.107	0.293859	1.000000	-
Rv0478	deoC	3	217.23	175.33	196.88	155.34	216.34	242.09	0.113	-0.189	-0.026	-0.358	0.107	0.266	0.860914	1.000000	-
Rv0479c	-	13	42.99	25.83	32.78	36.11	28.25	23.27	0.393	-0.245	0.048	0.170	-0.136	-0.370	0.986791	1.000000	-
Rv0480c	-	16	178.93	182.68	183.92	178.82	158.41	179.00	0.016	0.045	0.054	0.015	-0.155	0.016	0.997132	1.000000	-
Rv0481c	-	12	175.72	178.48	187.29	171.84	192.05	192.79	-0.057	-0.035	0.032	-0.089	0.068	0.073	0.992503	1.000000	-
Rv0482	murB	13	11.57	12.90	12.97	16.28	14.72	12.72	-0.161	-0.050	-0.044	0.200	0.090	-0.064	0.998899	1.000000	-
Rv0483	lprQ	29	306.38	319.97	293.45	293.87	312.38	288.73	0.018	0.080	-0.043	-0.041	0.046	-0.066	0.992059	1.000000	-
Rv0484c	-	10	412.01	321.83	305.65	328.17	305.40	273.52	0.340	-0.011	-0.085	0.016	-0.086	-0.242	0.888522	1.000000	-
Rv0485	-	23	131.97	127.57	106.39	97.73	88.83	131.91	0.202	0.155	-0.096	-0.213	-0.344	0.201	0.463914	1.000000	-
Rv0486	-	13	321.69	195.87	333.52	131.71	131.97	226.62	0.515	-0.186	0.567	-0.742	-0.739	0.019	0.000739	0.018665	-
Rv0487	-	9	419.29	370.17	376.26	297.54	257.45	348.42	0.278	0.101	0.124	-0.210	-0.415	0.015	0.256610	1.000000	-
Rv0488	-	9	192.35	211.65	209.12	218.43	203.44	184.08	-0.077	0.058	0.041	0.102	0.002	-0.139	0.978796	1.000000	-
Rv0489	gpm1	11	20.14	7.85	11.93	0.39	1.23	1.41	1.048	0.080	0.477	-1.173	-0.965	-0.923	0.000007	0.000254	-
Rv0490	senX3	16	183.42	165.12	169.19	176.93	159.58	169.28	0.102	-0.046	-0.012	0.051	-0.093	-0.011	0.996472	1.000000	-
Rv0491	regX3	9	343.92	328.87	359.51	347.98	307.60	335.39	0.028	-0.036	0.091	0.045	-0.131	-0.008	0.997247	1.000000	-
Rv0492c	-	18	466.60	428.09	416.70	414.85	377.12	349.78	0.188	0.066	0.027	0.021	-0.115	-0.222	0.569557	1.000000	-
Rv0492A	-	5	487.15	413.63	372.77	373.82	344.71	444.33	0.260	0.026	-0.122	-0.118	-0.233	0.128	0.585894	1.000000	-
Rv0493c	-	17	224.01	192.19	209.45	181.34	203.56	222.99	0.121	-0.095	0.026	-0.176	-0.014	0.115	0.882121	1.000000	-
Rv0494	-	7	178.72	169.29	170.38	204.03	165.79	175.42	0.011	-0.065	-0.056	0.198	-0.094	-0.015	0.991323	1.000000	-
Rv0495c	-	13	58.12	61.23	69.89	37.89	46.79	59.91	0.058	0.127	0.304	-0.500	-0.227	0.098	0.667768	1.000000	-
Rv0496	-	8	211.63	236.89	188.88	200.78	219.61	215.41	-0.004	0.155	-0.164	-0.078	0.048	0.021	0.983266	1.000000	-
Rv0497	-	14	97.14	116.51	106.46	129.29	175.47	110.18	-0.320	-0.070	-0.194	0.075	0.501	-0.147	0.444882	1.000000	-
Rv0498	-	12	255.72	286.31	235.61	273.21	247.87	262.46	-0.025	0.135	-0.140	0.069	-0.069	0.012	0.978793	1.000000	-
Rv0499	-	5	175.46	167.39	187.64	185.83	167.75	153.82	0.020	-0.046	0.114	0.101	-0.043	-0.164	0.831515	1.000000	-
Rv0500	proC	13	20.53	19.12	18.80	23.22	23.04	26.85	-0.077	-0.159	-0.178	0.068	0.058	0.242	0.873399	1.000000	-
Rv0500A	-	4	93.16	121.94	109.38	98.31	128.86	124.92	-0.263	0.108	-0.042	-0.189	0.185	0.142	0.988619	1.000000	-
Rv0500B	-	1	112.97	61.90	118.70	74.17	74.90	76.35	0.367	-0.452	0.435	-0.209	-0.196	-0.170	1.000000	1.000000	TA sites <= 1
Rv0501	galE2	25	123.66	150.84	127.51	142.45	150.15	148.00	-0.177	0.100	-0.134	0.020	0.093	0.073	0.840579	1.000000	-
Rv0502	-	19	154.22	185.05	150.64	177.05	182.56	194.62	-0.169	0.086	-0.202	0.024	0.067	0.157	0.824972	1.000000	-
Rv0503c	cmaA2	20	174.61	241.39	244.72	268.95	297.21	180.52	-0.416	0.041	0.060	0.193	0.335	-0.369	0.078104	0.894494	-
Rv0504c	-	8	9.69	12.07	14.55	22.46	41.84	3.79	-0.609	-0.392	-0.196	0.294	1.064	-1.349	0.000925	0.022361	-
Rv0505c	serB1	22	72.37	84.84	67.46	71.53	74.91	71.74	-0.027	0.189	-0.121	-0.042	0.020	-0.038	0.942923	1.000000	-
Rv0506	mmpS2	9	161.13	159.26	141.07	114.14	139.49	168.51	0.126	0.109	-0.060	-0.354	-0.076	0.188	0.723876	1.000000	-
Rv0507	mmpL2	81	82.19	79.46	77.53	76.52	81.17	87.20	0.025	-0.021	-0.054	-0.072	0.008	0.106	0.956036	1.000000	-
Rv0508	-	8	187.01	143.85	134.70	140.59	121.16	203.08	0.263	-0.105	-0.196	-0.137	-0.343	0.378	0.844665	1.000000	-
Rv0509	hemA	22	1.45	1.62	1.70	100.78	89.41	19.67	-2.660	-2.624	-2.606	1.375	1.211	-0.725	0.000000	0.000000	-
Rv0510	hemC	12	0.46	0.85	0.52	128.38	128.99	33.88	-3.303	-3.202	-3.285	1.309	1.315	-0.470	0.000000	0.000000	-
Rv0511	hemD	18	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv0512	hemB	22	4.12	8.36	12.67	99.32	105.18	32.69	-2.418	-1.866	-1.463	1.098	1.177	-0.371	0.000000	0.000000	-
Rv0513	-	7	109.19	151.53	103.08	144.32	152.11	178.31	-0.342	0.113	-0.422	0.045	0.118	0.341	0.015870	0.258453	-
Rv0514	-	2	391.60	368.82	375.04	451.31	404.33	456.02	-0.058	-0.143	-0.119	0.144	-0.012	0.159	0.999457	1.000000	-
Rv0515	-	18	321.10	323.24	305.17	329.79	289.16	295.01	0.047	0.057	-0.025	0.085	-0.101	-0.073	0.991335	1.000000	-
Rv0516c	-	9	174.17	182.99	172.23	151.98	151.08	159.62	0.073	0.142	0.057	-0.118	-0.126	-0.049	0.978279	1.000000	-
Rv0517	-	21	259.88	281.07	269.48	268.87	263.69	269.20	-0.047	0.064	0.004	0.001	-0.027	0.003	0.997277	1.000000	-
Rv0518	-	12	210.13	203.94	174.72	201.32	219.37	219.44	0.036	-0.006	-0.223	-0.024	0.097	0.097	0.994140	1.000000	-
Rv0519c	-	9	294.95	270.47	273.15	298.47	254.02	265.84	0.093	-0.029	-0.015	0.110	-0.118	-0.054	0.995946	1.000000	-
Rv0520	-	5	123.17	132.98	117.22	125.00	129.81	166.23	-0.100	0.006	-0.169	-0.080	-0.027	0.318	0.882269	1.000000	-
Rv0521	-	5	48.36	60.92	53.81	34.27	58.13	48.07	-0.059	0.246	0.081	-0.501	0.183	-0.067	0.469034	1.000000	-
Rv0522	gabP	23	179.64	172.41	147.95	157.41	148.53	179.49	0.126	0.068	-0.146	-0.059	-0.141	0.124	0.860885	1.000000	-
Rv0523c	-	9	133.56	111.52	132.16	140.63	137.38	152.08	-0.010	-0.260	-0.025	0.061	0.029	0.171	0.962165	1.000000	-
Rv0524	hemL	21	0.44	3.42	2.37	13.66	16.45	14.91	-1.315	-0.686	-0.877	0.463	0.663	0.556	0.000000	0.000000	-
Rv0525	-	10	41.23	26.56	29.70	38.97	31.58	33.04	0.264	-0.287	-0.150	0.191	-0.075	-0.018	0.996590	1.000000	-
Rv0526	-	7	9.81	17.34	8.03	4.72	2.71	15.23	0.017	0.610	-0.168	-0.591	-0.924	0.466	0.001131	0.026242	-
Rv0527	ccdA	5	7.98	2.04	9.40	0.00	1.45	5.26	0.473	-0.410	0.622	-0.904	-0.536	0.133	0.010311	0.188722	-
Rv0528	-	16	5.54	6.35	3.52	0.91	0.28	5.58	0.278	0.385	-0.030	-0.558	-0.720	0.282	0.004180	0.085102	-
Rv0529	ccsA	18	2.64	3.11	3.51	0.80	0.25	2.73	0.090	0.178	0.246	-0.306	-0.450	0.108	0.201564	1.000000	-
Rv0530	-	17	167.14	158.24	193.56	157.16	145.28	149.61	0.045	-0.031	0.251	-0.041	-0.151	-0.110	0.864160	1.000000	-
Rv0531	-	4	92.35	82.84	57.77	73.91	68.53	64.62	0.313	0.165	-0.320	0.011	-0.091	-0.170	0.938260	1.000000	-
Rv0532	PE_PGRS6	20	205.54	191.40	183.54	194.07	167.27	160.87	0.157	0.057	-0.002	0.077	-0.132	-0.187	0.931490	1.000000	-
Rv0533c	fabH	16	328.42	284.37	300.33	305.10	301.28	259.05	0.146	-0.059	0.019	0.041	0.023	-0.191	0.962386	1.000000	-
Rv0534c	menA	11	5.32	5.12	14.54	0.84	0.00	6.01	0.002	-0.027	0.923	-0.819	-1.044	0.096	0.000021	0.000717	-
Rv0535	pnp	9	202.67	212.51	205.28	224.24	172.60	185.59	0.015	0.082	0.033	0.158	-0.210	-0.109	0.985254	1.000000	-
Rv0536	galE3	12	120.82	107.51	146.75	118.26	113.06	77.83	0.080	-0.081	0.350	0.050	-0.012	-0.523	0.003123	0.065930	-
Rv0537c	-	19	234.20	231.78	218.76	230.32	212.84	220.74	0.058	0.043	-0.038	0.034	-0.077	-0.026	0.991151	1.000000	-
Rv0538	-	15	185.96	211.81	226.87	220.01	210.45	204.98	-0.171	0.012	0.109	0.066	0.003	-0.034	0.917295	1.000000	-
Rv0539	-	6	54.79	65.27	60.99	46.22	56.08	64.84	-0.076	0.157	0.066	-0.299	-0.045	0.148	0.952208	1.000000	-
Rv0540	-	11	140.26	127.11	168.40	161.78	120.34	129.88	-0.010	-0.147	0.245	0.189	-0.223	-0.117	0.843753	1.000000	-
Rv0541c	-	18	0.00	1.67	1.75	3.13	3.66	0.86	-0.453	-0.037	-0.021	0.248	0.340	-0.224	0.013103	0.224386	-
Rv0542c	menE	14	5.93	2.51	6.26	0.00	0.52	1.11	0.501	-0.040	0.545	-0.627	-0.485	-0.338	0.000034	0.001120	-
Rv0543c	-	2	0.00	2.60	0.00	0.00	3.63	0.00	-0.272	0.332	-0.272	-0.272	0.515	-0.272	0.409466	1.000000	-
Rv0544c	-	6	257.82	303.75	257.06	403.85	371.22	320.22	-0.302	-0.069	-0.306	0.336	0.216	0.005	0.732862	1.000000	-
Rv0545c	pitA	14	144.76	185.25	142.59	273.55	252.08	140.13	-0.379	-0.034	-0.400	0.516	0.401	-0.424	0.068291	0.806159	-
Rv0546c	-	8	61.69	55.45	73.84	80.66	77.83	89.08	-0.228	-0.369	0.014	0.133	0.085	0.269	0.174234	1.000000	-
Rv0547c	-	10	176.85	162.30	157.28	159.70	152.68	157.04	0.132	0.011	-0.032	-0.011	-0.074	-0.035	0.992354	1.000000	-
Rv0548c	menB	12	5.96	8.90	5.49	1.97	2.94	4.21	0.145	0.487	0.082	-0.508	-0.321	-0.106	0.069137	0.812855	-
Rv0549c	-	4	376.86	345.66	310.40	406.66	283.84	324.71	0.141	0.018	-0.135	0.249	-0.262	-0.071	0.437162	1.000000	-
Rv0550c	-	3	381.47	293.96	322.66	290.07	253.84	232.44	0.362	-0.009	0.124	-0.027	-0.216	-0.341	0.895632	1.000000	-
Rv0551c	fadD8	32	167.41	167.73	168.61	162.03	176.46	183.87	-0.030	-0.027	-0.020	-0.076	0.044	0.102	0.971212	1.000000	-
Rv0552	-	19	219.96	216.08	215.11	214.10	207.11	234.99	0.013	-0.012	-0.018	-0.025	-0.072	0.107	0.997316	1.000000	-
Rv0553	menC	12	28.23	26.32	18.26	17.04	22.95	29.00	0.215	0.130	-0.300	-0.378	-0.035	0.248	0.963717	1.000000	-
Rv0554	bpoC	14	198.59	179.80	177.90	141.13	130.05	221.86	0.179	0.039	0.024	-0.300	-0.414	0.335	0.052695	0.659097	-
Rv0555	menD	15	1.40	2.01	1.26	0.00	0.48	0.99	0.087	0.219	0.056	-0.269	-0.135	-0.009	0.201196	1.000000	-
Rv0556	-	13	1.32	0.00	5.30	5.72	2.29	8.57	-0.489	-0.826	0.216	0.274	-0.282	0.615	0.099912	1.000000	-
Rv0557	pimB	14	48.55	40.52	67.09	68.42	72.63	51.80	-0.238	-0.473	0.191	0.217	0.297	-0.153	0.301464	1.000000	-
Rv0558	ubiE	14	4.05	13.81	4.01	4.39	11.28	4.23	-0.402	0.653	-0.408	-0.350	0.445	-0.374	0.000030	0.001015	-
Rv0559c	-	6	180.69	199.76	191.44	174.90	216.78	205.49	-0.106	0.035	-0.025	-0.152	0.150	0.075	0.976893	1.000000	-
Rv0560c	-	15	75.23	90.62	81.78	82.04	100.56	82.04	-0.172	0.081	-0.059	-0.054	0.224	-0.054	0.897397	1.000000	-
Rv0561c	-	18	165.13	131.05	167.76	119.36	123.00	125.23	0.245	-0.078	0.267	-0.207	-0.166	-0.141	0.471302	1.000000	-
Rv0562	grcC1	14	0.00	2.88	1.11	0.00	0.52	0.39	-0.218	0.439	0.071	-0.218	-0.076	-0.111	0.015942	0.258568	-
Rv0563	htpX	11	214.20	258.05	222.34	420.98	468.96	190.38	-0.457	-0.194	-0.404	0.502	0.656	-0.623	0.000002	0.000083	-
Rv0564c	gpsA	11	215.35	175.69	176.47	198.62	153.55	162.12	0.250	-0.036	-0.030	0.136	-0.225	-0.149	0.773034	1.000000	-
Rv0565c	-	36	179.41	192.56	166.16	190.24	192.39	183.97	-0.036	0.063	-0.144	0.046	0.062	-0.001	0.932057	1.000000	-
Rv0566c	-	5	72.39	79.59	65.03	61.03	67.32	79.68	0.029	0.157	-0.115	-0.200	-0.069	0.159	0.997538	1.000000	-
Rv0567	-	19	168.31	154.78	153.39	146.34	148.44	177.22	0.088	-0.029	-0.042	-0.108	-0.088	0.160	0.861009	1.000000	-
Rv0568	cyp135B1	12	280.42	242.53	257.54	255.30	207.08	248.60	0.171	-0.035	0.050	0.038	-0.258	0.000	0.927025	1.000000	-
Rv0569	-	3	392.79	379.06	319.04	368.84	329.62	354.30	0.135	0.084	-0.161	0.045	-0.115	-0.012	0.884516	1.000000	-
Rv0570	nrdZ	37	124.70	107.56	124.92	124.34	119.55	112.57	0.066	-0.139	0.068	0.062	0.007	-0.076	0.958580	1.000000	-
Rv0571c	-	13	66.46	51.31	66.31	60.80	53.00	57.94	0.152	-0.192	0.149	0.033	-0.149	-0.031	0.826901	1.000000	-
Rv0572c	-	8	181.06	162.69	157.78	145.69	164.46	179.74	0.128	-0.022	-0.065	-0.176	-0.007	0.118	0.972734	1.000000	-
Rv0573c	-	16	171.60	153.10	149.50	180.54	172.41	143.97	0.082	-0.078	-0.111	0.153	0.089	-0.164	0.861918	1.000000	-
Rv0574c	-	20	162.73	185.02	150.08	177.25	159.43	146.72	-0.007	0.173	-0.120	0.113	-0.036	-0.152	0.880811	1.000000	-
Rv0575c	-	14	372.29	328.18	369.79	306.60	295.30	281.25	0.191	0.011	0.181	-0.085	-0.139	-0.208	0.748965	1.000000	-
Rv0576	-	19	146.03	150.36	139.47	138.50	151.01	133.94	0.027	0.068	-0.037	-0.047	0.074	-0.093	0.991048	1.000000	-
Rv0577	TB27.3	13	56.64	47.78	48.18	45.91	51.72	63.05	0.107	-0.116	-0.105	-0.168	-0.012	0.250	0.933832	1.000000	-
Rv0578c	PE_PGRS7	27	116.40	141.40	116.14	127.40	114.70	122.85	-0.078	0.192	-0.081	0.047	-0.098	-0.003	0.957140	1.000000	-
Rv0579	-	15	208.90	181.33	216.23	211.28	202.18	207.92	0.029	-0.170	0.078	0.045	-0.017	0.022	0.986942	1.000000	-
Rv0580c	-	9	234.53	148.91	191.93	177.91	167.40	177.32	0.349	-0.289	0.067	-0.040	-0.125	-0.044	0.182656	1.000000	-
Rv0581	-	4	409.44	315.75	384.65	362.71	352.55	289.89	0.213	-0.157	0.124	0.041	0.000	-0.278	0.951050	1.000000	-
Rv0582	-	9	55.87	54.82	50.67	45.60	71.17	64.65	-0.030	-0.055	-0.158	-0.296	0.294	0.165	0.552233	1.000000	-
Rv0583c	lpqN	7	99.62	156.93	136.75	145.96	131.38	131.41	-0.407	0.224	0.032	0.122	-0.024	-0.024	0.853120	1.000000	-
Rv0584	-	62	117.22	102.57	115.61	98.45	100.03	111.49	0.119	-0.065	0.100	-0.122	-0.100	0.049	0.413195	1.000000	-
Rv0585c	-	41	110.11	86.82	108.81	93.44	83.34	97.91	0.178	-0.148	0.162	-0.048	-0.204	0.017	0.606395	1.000000	-
Rv0586	-	12	32.34	30.95	36.80	42.33	41.23	38.73	-0.172	-0.227	-0.009	0.170	0.136	0.056	0.942423	1.000000	-
Rv0587	yrbE2A	12	61.11	51.00	74.66	52.21	50.37	55.02	0.084	-0.156	0.352	-0.125	-0.172	-0.056	0.474132	1.000000	-
Rv0588	yrbE2B	15	75.04	62.52	63.77	65.30	68.93	57.66	0.182	-0.063	-0.037	-0.005	0.068	-0.171	0.970889	1.000000	-
Rv0589	mce2A	27	49.20	54.10	54.76	40.16	41.52	42.65	0.058	0.183	0.199	-0.205	-0.163	-0.128	0.930373	1.000000	-
Rv0590	mce2B	10	69.03	48.38	59.36	53.62	48.81	52.74	0.295	-0.176	0.093	-0.041	-0.165	-0.063	0.811569	1.000000	-
Rv0590A	-	7	27.99	23.21	40.23	26.62	17.15	28.37	0.032	-0.194	0.487	-0.029	-0.543	0.049	0.494928	1.000000	-
Rv0591	mce2C	22	121.80	126.44	119.60	109.08	108.53	117.05	0.055	0.107	0.029	-0.098	-0.105	-0.000	0.906745	1.000000	-
Rv0592	mce2D	29	82.32	65.92	86.26	83.70	75.58	74.71	0.072	-0.228	0.135	0.094	-0.044	-0.060	0.767270	1.000000	-
Rv0593	lprL	19	84.37	71.38	77.18	71.17	61.74	78.01	0.178	-0.048	0.057	-0.052	-0.243	0.072	0.910405	1.000000	-
Rv0594	mce2F	30	163.33	167.40	157.04	151.24	153.80	175.36	0.017	0.051	-0.038	-0.091	-0.067	0.117	0.922345	1.000000	-
Rv0595c	-	8	200.19	204.05	183.65	216.93	206.60	243.40	-0.062	-0.035	-0.183	0.052	-0.017	0.214	0.846269	1.000000	-
Rv0596c	-	5	39.89	80.99	43.58	55.63	33.22	51.17	-0.313	0.625	-0.199	0.121	-0.545	0.011	0.842236	1.000000	-
Rv0597c	-	13	177.99	153.96	209.22	161.01	164.74	166.49	0.046	-0.157	0.273	-0.094	-0.062	-0.048	0.894115	1.000000	-
Rv0598c	-	7	180.11	148.19	184.06	213.95	173.12	190.81	-0.012	-0.285	0.018	0.230	-0.068	0.069	0.978478	1.000000	-
Rv0599c	-	6	82.30	87.45	73.98	68.33	57.31	59.89	0.190	0.272	0.045	-0.062	-0.297	-0.238	0.857376	1.000000	-
Rv0600c	-	3	270.13	249.36	245.81	208.35	234.55	198.79	0.200	0.087	0.067	-0.167	0.000	-0.233	0.864165	1.000000	-
Rv0601c	-	4	188.87	127.89	191.65	143.34	123.34	135.17	0.307	-0.238	0.328	-0.079	-0.288	-0.161	0.938799	1.000000	-
Rv0602c	tcrA	11	261.54	250.56	287.35	280.60	229.60	227.16	0.030	-0.031	0.163	0.129	-0.155	-0.170	0.875443	1.000000	-
Rv0603	-	1	108.87	56.20	174.29	145.67	121.85	64.05	-0.037	-0.933	0.618	0.367	0.119	-0.759	1.000000	1.000000	TA sites <= 1
Rv0604	lpqO	7	275.38	251.29	288.29	237.16	253.54	257.89	0.078	-0.051	0.143	-0.133	-0.039	-0.015	0.994833	1.000000	-
Rv0605	-	10	314.92	299.26	314.00	321.30	340.09	301.30	-0.001	-0.073	-0.005	0.027	0.108	-0.064	0.999070	1.000000	-
Rv0606	-	8	223.52	182.62	152.71	176.03	219.35	146.10	0.279	-0.006	-0.256	-0.057	0.252	-0.318	0.724301	1.000000	-
Rv0607	-	1	311.91	275.40	364.69	263.17	194.05	145.86	0.263	0.086	0.485	0.022	-0.408	-0.808	1.000000	1.000000	TA sites <= 1
Rv0608	-	2	316.01	191.50	203.59	254.32	237.28	190.88	0.436	-0.272	-0.186	0.128	0.030	-0.277	0.978567	1.000000	-
Rv0609	-	7	95.69	134.03	102.74	81.84	86.29	95.43	-0.051	0.414	0.046	-0.265	-0.193	-0.055	0.408530	1.000000	-
Rv0609A	-	2	163.26	152.97	227.64	192.82	174.68	130.06	-0.086	-0.177	0.382	0.148	0.009	-0.403	0.236407	1.000000	-
Rv0610c	-	11	206.04	273.22	240.12	209.50	231.17	202.39	-0.137	0.262	0.079	-0.114	0.025	-0.162	0.761468	1.000000	-
Rv0611c	-	12	90.91	110.35	108.01	81.99	102.08	115.38	-0.150	0.116	0.086	-0.291	0.008	0.177	0.741656	1.000000	-
Rv0612	-	6	236.67	192.78	237.88	242.82	215.15	216.33	0.080	-0.209	0.087	0.116	-0.054	-0.047	0.978347	1.000000	-
Rv0613c	-	16	310.43	271.97	278.65	281.47	257.64	225.39	0.193	0.005	0.040	0.054	-0.071	-0.260	0.860941	1.000000	-
Rv0614	-	14	181.69	199.89	189.24	176.40	194.92	211.09	-0.079	0.055	-0.022	-0.121	0.020	0.132	0.982177	1.000000	-
Rv0615	-	4	670.67	486.91	472.82	449.49	444.88	466.08	0.424	-0.034	-0.075	-0.148	-0.162	-0.096	0.813333	1.000000	-
Rv0616c	-	6	130.72	126.92	151.39	142.58	94.26	116.89	0.039	-0.002	0.243	0.160	-0.413	-0.116	0.795514	1.000000	-
Rv0617	-	3	256.22	263.56	251.94	265.25	189.42	178.89	0.127	0.167	0.103	0.176	-0.299	-0.379	0.965478	1.000000	-
Rv0618	galTa	9	125.98	85.50	110.80	71.73	78.57	76.29	0.441	-0.092	0.263	-0.330	-0.207	-0.247	0.104664	1.000000	-
Rv0619	galTb	12	105.44	80.89	99.78	66.53	66.90	62.63	0.372	0.009	0.296	-0.255	-0.248	-0.336	0.126347	1.000000	-
Rv0620	galK	9	118.94	98.75	147.63	123.39	97.43	104.00	0.046	-0.210	0.347	0.097	-0.229	-0.139	0.504262	1.000000	-
Rv0621	-	9	177.05	160.13	127.12	131.59	118.70	134.09	0.314	0.173	-0.149	-0.100	-0.244	-0.074	0.887907	1.000000	-
Rv0622	-	13	68.52	47.84	71.95	66.25	63.16	88.83	0.015	-0.461	0.081	-0.030	-0.094	0.367	0.822532	1.000000	-
Rv0623	-	3	226.93	200.18	199.38	176.42	209.30	170.92	0.198	0.021	0.016	-0.156	0.084	-0.201	0.992998	1.000000	-
Rv0624	-	6	169.14	176.91	173.67	173.71	187.63	193.68	-0.080	-0.017	-0.043	-0.043	0.065	0.110	0.994041	1.000000	-
Rv0625c	-	10	297.67	251.53	285.45	308.82	248.46	215.77	0.149	-0.090	0.090	0.201	-0.107	-0.306	0.922364	1.000000	-
Rv0626	-	4	138.81	129.60	154.98	116.60	125.83	144.39	0.038	-0.057	0.192	-0.204	-0.098	0.093	0.967457	1.000000	-
Rv0627	-	1	7.53	30.40	47.05	23.40	58.70	30.35	-1.597	-0.099	0.457	-0.417	0.749	-0.101	1.000000	1.000000	TA sites <= 1
Rv0628c	-	4	279.31	232.51	235.68	235.71	195.08	220.32	0.256	-0.004	0.016	0.016	-0.251	-0.080	0.993683	1.000000	-
Rv0629c	recD	16	75.38	85.26	67.03	70.36	75.07	67.54	0.035	0.202	-0.123	-0.058	0.030	-0.113	0.967699	1.000000	-
Rv0630c	recB	34	152.41	126.12	150.95	136.03	133.91	122.02	0.150	-0.114	0.136	-0.009	-0.031	-0.160	0.783413	1.000000	-
Rv0631c	recC	19	163.95	130.80	163.17	154.79	131.71	133.98	0.158	-0.157	0.152	0.078	-0.147	-0.123	0.917703	1.000000	-
Rv0632c	echA3	13	115.59	96.51	101.25	117.39	118.63	123.14	0.043	-0.206	-0.140	0.064	0.078	0.130	0.908553	1.000000	-
Rv0633c	-	13	235.04	249.23	244.60	258.11	250.44	249.63	-0.075	0.008	-0.019	0.057	0.015	0.010	0.999537	1.000000	-
Rv0634c	-	13	76.00	84.64	91.18	67.74	80.04	94.83	-0.110	0.036	0.138	-0.265	-0.040	0.192	0.828617	1.000000	-
Rv0634A	-	6	84.80	93.42	99.23	104.96	99.38	93.96	-0.169	-0.037	0.046	0.123	0.048	-0.029	0.992555	1.000000	-
Rv0634B	rpmG	3	0.00	0.00	0.00	4.89	4.82	0.00	-0.404	-0.404	-0.404	0.580	0.569	-0.404	0.228327	1.000000	-
Rv0635	-	14	0.00	0.36	0.00	0.00	0.00	0.00	-0.017	0.082	-0.017	-0.017	-0.017	-0.017	0.307721	1.000000	-
Rv0636	-	7	0.00	0.00	0.00	0.00	0.64	0.00	-0.031	-0.031	-0.031	-0.031	0.144	-0.031	0.309247	1.000000	-
Rv0637	-	7	11.50	25.54	9.83	13.44	27.83	20.83	-0.489	0.399	-0.643	-0.329	0.503	0.157	0.190203	1.000000	-
Rv0638	secE	9	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv0639	nusG	12	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv0640	rplK	5	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv0641	rplA	7	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv0642c	mmaA4	18	5.83	29.82	15.55	42.14	48.88	19.04	-1.558	0.128	-0.634	0.565	0.757	-0.407	0.000000	0.000000	-
Rv0643c	mmaA3	22	147.57	220.18	147.93	232.97	237.84	197.51	-0.407	0.154	-0.404	0.234	0.263	0.001	0.031922	0.450073	-
Rv0644c	mmaA2	11	280.16	296.47	337.41	370.21	407.58	299.07	-0.240	-0.160	0.024	0.156	0.293	-0.148	0.660734	1.000000	-
Rv0645c	mmaA1	20	382.25	355.41	347.00	360.21	361.66	380.14	0.068	-0.036	-0.070	-0.017	-0.011	0.060	0.988650	1.000000	-
Rv0646c	lipG	10	324.80	243.36	225.37	224.34	239.31	219.85	0.393	-0.016	-0.125	-0.131	-0.040	-0.160	0.080741	0.910044	-
Rv0647c	-	14	5.12	9.42	4.46	8.67	14.50	11.24	-0.459	0.053	-0.555	-0.024	0.488	0.224	0.802301	1.000000	-
Rv0648	-	38	270.30	257.38	280.20	264.62	270.50	243.58	0.031	-0.038	0.082	0.001	0.032	-0.116	0.940591	1.000000	-
Rv0649	fabD2	4	505.08	396.38	570.86	442.71	395.64	321.54	0.201	-0.145	0.376	0.013	-0.147	-0.442	0.926154	1.000000	-
Rv0650	-	5	189.84	173.97	183.97	237.08	237.20	177.55	-0.073	-0.195	-0.117	0.240	0.241	-0.167	0.662159	1.000000	-
Rv0651	rplJ	5	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv0652	rplL	0	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	TA sites <= 1
Rv0653c	-	11	212.62	233.22	239.48	256.08	234.05	238.64	-0.145	-0.015	0.023	0.117	-0.010	0.018	0.978055	1.000000	-
Rv0654	-	27	315.80	298.88	299.63	288.26	277.73	259.47	0.121	0.043	0.047	-0.008	-0.061	-0.157	0.986432	1.000000	-
Rv0655	mkl	14	70.98	111.56	60.35	123.63	138.17	83.95	-0.440	0.177	-0.658	0.319	0.474	-0.213	0.179417	1.000000	-
Rv0656c	-	4	176.64	194.61	194.69	177.40	220.31	201.15	-0.133	0.003	0.004	-0.127	0.178	0.050	0.891273	1.000000	-
Rv0657c	-	1	179.81	179.70	131.30	259.94	163.15	217.21	-0.066	-0.067	-0.506	0.453	-0.203	0.199	1.000000	1.000000	TA sites <= 1
Rv0658c	-	17	135.38	171.05	147.34	159.46	141.67	147.58	-0.147	0.180	-0.029	0.082	-0.084	-0.027	0.883342	1.000000	-
Rv0659c	-	4	290.21	317.91	317.25	321.31	297.05	373.66	-0.137	-0.007	-0.010	0.008	-0.104	0.222	0.997135	1.000000	-
Rv0660c	-	2	680.08	572.69	533.86	600.22	405.83	428.04	0.339	0.093	-0.008	0.160	-0.399	-0.323	0.025956	0.376412	-
Rv0661c	-	5	274.06	209.30	236.73	285.74	228.24	238.95	0.156	-0.225	-0.051	0.215	-0.103	-0.038	0.329730	1.000000	-
Rv0662c	-	6	135.08	128.20	192.28	127.94	137.88	137.56	-0.081	-0.154	0.413	-0.156	-0.052	-0.056	0.905941	1.000000	-
Rv0663	atsD	46	104.19	94.29	108.00	105.78	105.94	87.70	0.043	-0.094	0.093	0.064	0.066	-0.193	0.759723	1.000000	-
Rv0664	-	3	260.08	137.17	254.26	242.58	218.30	174.54	0.272	-0.627	0.240	0.174	0.025	-0.290	0.677762	1.000000	-
Rv0665	-	5	190.23	148.96	134.29	169.71	176.64	165.63	0.206	-0.137	-0.281	0.046	0.102	0.012	0.929019	1.000000	-
Rv0666	-	0	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	TA sites <= 1
Rv0667	rpoB	38	0.00	0.27	0.00	0.00	0.00	0.00	-0.013	0.063	-0.013	-0.013	-0.013	-0.013	0.033763	0.467756	-
Rv0668	rpoC	51	23.64	23.05	18.19	13.80	15.27	20.02	0.255	0.225	-0.049	-0.352	-0.244	0.060	0.692030	1.000000	-
Rv0669c	-	37	177.12	180.29	193.52	185.08	164.02	183.00	-0.027	-0.002	0.098	0.035	-0.134	0.019	0.955665	1.000000	-
Rv0670	end	5	335.82	239.29	255.78	262.59	325.16	232.70	0.282	-0.198	-0.104	-0.067	0.237	-0.237	0.698697	1.000000	-
Rv0671	lpqP	13	158.62	152.11	164.45	156.94	160.51	151.75	0.011	-0.048	0.061	-0.004	0.027	-0.051	0.999422	1.000000	-
Rv0672	fadE8	27	131.37	140.65	150.22	147.23	158.01	131.51	-0.120	-0.025	0.067	0.039	0.138	-0.118	0.940761	1.000000	-
Rv0673	echA4	9	102.63	115.50	123.87	96.43	90.46	107.52	-0.045	0.118	0.214	-0.131	-0.219	0.019	0.798072	1.000000	-
Rv0674	-	7	24.61	16.84	43.85	17.91	27.59	26.40	-0.076	-0.515	0.647	-0.446	0.063	0.009	0.187041	1.000000	-
Rv0675	echA5	4	32.44	27.09	42.15	42.01	65.88	32.75	-0.278	-0.500	0.055	0.051	0.643	-0.266	0.204034	1.000000	-
Rv0676c	mmpL5	32	0.29	1.58	39.45	104.07	115.48	0.48	-3.198	-2.884	-0.127	1.167	1.311	-3.146	0.000000	0.000000	-
Rv0677c	mmpS5	6	1.26	3.33	59.47	148.43	153.10	0.00	-3.398	-2.985	-0.032	1.219	1.262	-3.721	0.000000	0.000000	-
Rv0678	-	5	259.01	255.67	223.39	190.18	193.78	337.97	0.088	0.070	-0.121	-0.347	-0.321	0.466	0.609004	1.000000	-
Rv0679c	-	6	165.71	181.76	175.01	223.16	221.64	183.18	-0.205	-0.075	-0.128	0.214	0.204	-0.064	0.915372	1.000000	-
Rv0680c	-	3	180.04	304.68	237.63	291.47	362.79	323.63	-0.640	0.103	-0.249	0.040	0.351	0.189	0.155175	1.000000	-
Rv0681	-	12	227.74	197.81	227.63	178.25	158.43	162.56	0.240	0.041	0.239	-0.105	-0.270	-0.234	0.501473	1.000000	-
Rv0682	rpsL	8	0.00	0.00	0.00	0.00	0.00	0.68	-0.032	-0.032	-0.032	-0.032	-0.032	0.151	0.308863	1.000000	-
Rv0683	rpsG	5	0.77	0.00	0.00	0.00	0.00	0.00	0.171	-0.037	-0.037	-0.037	-0.037	-0.037	0.612000	1.000000	-
Rv0684	fusA1	34	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv0685	tuf	11	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv0686	-	12	224.80	218.98	221.37	227.90	222.16	204.80	0.030	-0.007	0.009	0.050	0.014	-0.101	0.998113	1.000000	-
Rv0687	fabG	17	88.67	96.98	93.88	83.88	81.41	93.37	-0.016	0.107	0.062	-0.092	-0.132	0.055	0.992041	1.000000	-
Rv0688	-	18	101.73	99.28	83.70	85.16	90.43	90.15	0.142	0.108	-0.125	-0.102	-0.020	-0.024	0.943362	1.000000	-
Rv0689c	-	4	444.22	379.36	375.75	431.03	331.24	299.27	0.235	0.010	-0.004	0.192	-0.183	-0.327	0.956533	1.000000	-
Rv0690c	-	17	89.98	88.12	112.16	98.59	112.30	99.25	-0.146	-0.174	0.157	-0.020	0.159	-0.011	0.960786	1.000000	-
Rv0691c	-	9	113.41	130.70	140.87	113.73	122.43	118.62	-0.116	0.081	0.185	-0.112	-0.010	-0.054	0.814257	1.000000	-
Rv0692	-	7	190.50	173.83	151.73	234.19	189.39	226.43	-0.028	-0.157	-0.347	0.263	-0.036	0.215	0.854470	1.000000	-
Rv0693	pqqE	18	64.84	49.18	71.88	80.80	81.61	73.20	-0.108	-0.474	0.031	0.189	0.203	0.056	0.332638	1.000000	-
Rv0694	lldD1	17	51.47	67.72	73.30	67.01	65.98	82.04	-0.369	-0.004	0.103	-0.018	-0.039	0.255	0.715681	1.000000	-
Rv0695	-	12	63.13	54.42	57.25	57.68	57.07	53.34	0.133	-0.065	0.002	0.012	-0.002	-0.091	0.999381	1.000000	-
Rv0696	-	26	116.72	94.08	140.41	113.70	111.13	89.68	0.070	-0.227	0.327	0.034	0.002	-0.292	0.382700	1.000000	-
Rv0697	-	27	23.14	26.60	29.65	22.62	18.68	20.27	-0.018	0.149	0.282	-0.045	-0.267	-0.173	0.663480	1.000000	-
Rv0698	-	12	39.66	36.26	50.41	42.36	35.99	33.89	-0.003	-0.118	0.308	0.081	-0.127	-0.203	0.914606	1.000000	-
Rv0699	-	2	3.77	10.42	9.47	13.80	13.10	2.35	-0.657	0.159	0.067	0.444	0.389	-0.911	0.777775	1.000000	-
Rv0700	rpsJ	6	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv0701	rplC	16	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv0702	rplD	11	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv0703	rplW	4	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv0704	rplB	17	0.00	1.19	0.00	0.57	0.26	0.32	-0.108	0.199	-0.108	0.048	-0.034	-0.020	0.362683	1.000000	-
Rv0705	rpsS	2	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv0706	rplV	8	0.48	0.00	0.79	0.00	0.00	0.00	0.073	-0.060	0.151	-0.060	-0.060	-0.060	0.561949	1.000000	-
Rv0707	rpsC	14	0.00	0.00	0.45	0.00	0.00	0.00	-0.021	-0.021	0.103	-0.021	-0.021	-0.021	0.307721	1.000000	-
Rv0708	rplP	10	5.77	1.51	1.26	4.21	2.80	1.48	0.459	-0.267	-0.325	0.233	-0.008	-0.275	0.691748	1.000000	-
Rv0709	rpmC	4	1.37	0.00	0.00	4.56	4.74	2.53	-0.177	-0.526	-0.526	0.409	0.436	0.064	0.517681	1.000000	-
Rv0710	rpsQ	11	24.96	26.89	22.21	18.98	28.56	24.93	0.026	0.116	-0.113	-0.295	0.190	0.025	0.998460	1.000000	-
Rv0711	atsA	46	115.47	105.15	113.17	107.84	106.44	94.53	0.104	-0.025	0.076	0.009	-0.009	-0.172	0.917228	1.000000	-
Rv0712	-	19	82.33	59.08	87.31	72.91	65.80	57.64	0.203	-0.243	0.283	0.039	-0.099	-0.276	0.568506	1.000000	-
Rv0713	-	19	187.54	186.84	208.14	205.57	186.49	201.31	-0.062	-0.067	0.085	0.067	-0.070	0.038	0.997267	1.000000	-
Rv0714	rplN	4	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv0715	rplX	5	0.00	1.00	0.00	0.99	0.00	0.00	-0.093	0.171	-0.093	0.167	-0.093	-0.093	0.634583	1.000000	-
Rv0716	rplE	4	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv0717	rpsN	2	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv0718	rpsH	10	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv0719	rplF	15	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv0720	rplR	4	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv0721	rpsE	12	29.40	23.12	23.18	36.52	47.37	36.01	-0.128	-0.419	-0.416	0.143	0.478	0.125	0.833031	1.000000	-
Rv0722	rpmD	1	33.77	55.75	6.30	65.77	60.45	29.70	-0.276	0.372	-2.055	0.592	0.479	-0.436	1.000000	1.000000	TA sites <= 1
Rv0723	rplO	2	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv0724	sppA	30	97.30	92.79	85.87	95.05	102.75	99.02	0.026	-0.039	-0.145	-0.006	0.101	0.050	0.981512	1.000000	-
Rv0724A	-	5	103.88	81.86	147.82	123.99	135.18	127.25	-0.199	-0.525	0.290	0.045	0.165	0.081	0.919924	1.000000	-
Rv0725c	-	15	168.61	130.96	140.89	130.91	138.44	134.79	0.252	-0.101	0.001	-0.101	-0.023	-0.060	0.919396	1.000000	-
Rv0726c	-	16	144.70	127.37	134.84	121.20	123.72	144.70	0.120	-0.058	0.022	-0.126	-0.098	0.120	0.947550	1.000000	-
Rv0727c	fucA	12	284.13	213.72	199.19	191.04	173.37	231.45	0.391	-0.012	-0.111	-0.169	-0.306	0.101	0.133354	1.000000	-
Rv0728c	serA2	9	171.07	153.58	151.21	158.45	137.67	174.27	0.114	-0.037	-0.059	0.007	-0.190	0.140	0.991557	1.000000	-
Rv0729	xylB	19	263.15	236.12	227.85	245.69	243.41	237.94	0.116	-0.037	-0.087	0.019	0.006	-0.026	0.988166	1.000000	-
Rv0730	-	3	434.22	382.08	408.30	391.65	392.47	353.10	0.140	-0.042	0.052	-0.007	-0.004	-0.155	0.998367	1.000000	-
Rv0731c	-	10	327.24	382.10	317.52	321.09	340.98	317.67	-0.031	0.190	-0.074	-0.058	0.028	-0.073	0.965045	1.000000	-
Rv0732	secY	28	0.88	1.09	0.00	2.16	1.94	1.28	-0.082	-0.031	-0.316	0.202	0.156	0.012	0.648905	1.000000	-
Rv0733	adk	5	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv0734	mapA	9	101.67	147.84	132.28	138.82	139.03	155.97	-0.402	0.117	-0.038	0.029	0.031	0.192	0.947905	1.000000	-
Rv0735	sigL	7	329.30	279.65	315.82	390.03	341.07	326.20	-0.004	-0.236	-0.064	0.236	0.045	-0.018	0.651614	1.000000	-
Rv0736	-	8	25.78	33.72	20.29	43.44	79.81	16.55	-0.435	-0.103	-0.718	0.220	1.028	-0.949	0.001048	0.024592	-
Rv0737	-	5	146.36	136.28	147.64	161.52	176.02	190.13	-0.121	-0.221	-0.109	0.016	0.137	0.245	0.917569	1.000000	-
Rv0738	-	1	143.71	138.00	81.45	64.80	185.05	113.60	0.238	0.181	-0.545	-0.853	0.592	-0.088	1.000000	1.000000	TA sites <= 1
Rv0739	-	18	196.29	247.84	226.36	217.25	233.12	251.34	-0.215	0.114	-0.015	-0.072	0.027	0.133	0.886952	1.000000	-
Rv0740	-	10	79.57	65.82	94.74	68.46	67.12	78.22	0.068	-0.188	0.306	-0.135	-0.161	0.045	0.951246	1.000000	-
Rv0741	-	3	55.98	33.77	43.78	39.09	43.03	49.45	0.310	-0.343	-0.012	-0.158	-0.034	0.147	0.844908	1.000000	-
Rv0742	PE_PGRS8	6	330.08	298.33	279.08	257.53	295.75	264.28	0.196	0.052	-0.042	-0.156	0.040	-0.119	0.976563	1.000000	-
Rv0743c	-	9	313.18	305.77	294.82	311.63	291.33	330.10	0.025	-0.009	-0.061	0.018	-0.078	0.099	0.995852	1.000000	-
Rv0744c	-	9	20.86	28.82	26.39	25.47	28.87	37.59	-0.352	0.036	-0.072	-0.115	0.037	0.368	0.582487	1.000000	-
Rv0745	-	7	324.52	300.27	309.69	325.85	335.22	340.18	0.008	-0.102	-0.058	0.014	0.054	0.075	0.999419	1.000000	-
Rv0746	PE_PGRS9	15	83.89	79.81	68.86	66.03	74.63	64.71	0.189	0.121	-0.078	-0.135	0.030	-0.162	0.897720	1.000000	-
Rv0747	PE_PGRS10	16	168.52	165.15	174.77	168.73	147.32	133.93	0.075	0.047	0.126	0.077	-0.113	-0.246	0.920011	1.000000	-
Rv0748	-	2	320.85	419.12	377.04	333.01	344.10	391.37	-0.180	0.200	0.049	-0.128	-0.081	0.102	0.983986	1.000000	-
Rv0749	-	4	200.28	144.25	139.07	166.68	128.76	147.84	0.364	-0.096	-0.147	0.106	-0.254	-0.061	0.935163	1.000000	-
Rv0749A	-	1	88.34	81.85	34.45	56.87	85.70	85.75	0.275	0.171	-0.968	-0.319	0.233	0.234	1.000000	1.000000	TA sites <= 1
Rv0750	-	5	161.55	118.03	108.29	119.86	115.65	118.11	0.373	-0.064	-0.183	-0.042	-0.092	-0.063	0.870420	1.000000	-
Rv0751c	mmsB	7	162.44	159.13	140.57	178.78	189.77	144.91	-0.001	-0.030	-0.203	0.133	0.217	-0.161	0.815777	1.000000	-
Rv0752c	fadE9	15	112.90	120.30	133.28	125.69	130.19	121.98	-0.130	-0.043	0.100	0.018	0.067	-0.023	0.965167	1.000000	-
Rv0753c	mmsA	18	175.81	191.07	148.43	162.43	161.73	159.05	0.077	0.194	-0.160	-0.034	-0.040	-0.063	0.916911	1.000000	-
Rv0754	PE_PGRS11	31	194.35	192.50	187.56	193.33	171.78	178.69	0.059	0.046	0.009	0.052	-0.114	-0.059	0.973402	1.000000	-
Rv0755c	PPE12	55	20.76	19.71	17.15	19.12	20.33	21.62	0.056	-0.004	-0.162	-0.039	0.032	0.103	0.997173	1.000000	-
Rv0755A	-	6	157.45	159.62	129.70	154.65	177.04	175.74	-0.014	0.005	-0.284	-0.039	0.150	0.140	0.996630	1.000000	-
Rv0756c	-	7	657.23	548.83	737.51	656.95	596.01	520.36	0.085	-0.173	0.250	0.084	-0.055	-0.249	0.750264	1.000000	-
Rv0757	phoP	12	2.79	4.63	0.52	1.98	1.58	6.05	-0.025	0.281	-0.521	-0.183	-0.268	0.479	0.015640	0.255747	-
Rv0758	phoR	18	3.81	11.31	2.26	4.94	2.96	6.66	-0.228	0.660	-0.507	-0.055	-0.376	0.176	0.000947	0.022757	-
Rv0759c	-	2	218.54	242.02	227.12	200.24	245.50	204.08	-0.028	0.116	0.026	-0.151	0.136	-0.124	0.955686	1.000000	-
Rv0760c	-	6	27.61	26.47	27.15	27.80	35.34	47.74	-0.183	-0.234	-0.203	-0.175	0.124	0.511	0.905924	1.000000	-
Rv0761c	adhB	13	70.76	65.06	73.66	109.99	92.55	72.00	-0.177	-0.290	-0.123	0.425	0.187	-0.154	0.774547	1.000000	-
Rv0762c	-	13	186.61	190.00	168.20	186.20	168.92	214.95	0.006	0.031	-0.140	0.003	-0.134	0.205	0.924841	1.000000	-
Rv0763c	-	2	13.90	50.87	23.52	39.92	19.85	30.03	-0.876	0.688	-0.282	0.373	-0.481	0.014	0.178630	1.000000	-
Rv0764c	cyp51	18	60.25	57.01	61.83	44.33	54.38	53.49	0.116	0.042	0.150	-0.288	-0.020	-0.042	0.847012	1.000000	-
Rv0765c	-	11	79.38	70.40	91.71	77.27	89.17	98.31	-0.083	-0.245	0.114	-0.119	0.075	0.209	0.846602	1.000000	-
Rv0766c	cyp123	25	30.44	27.08	36.91	28.51	36.92	28.47	-0.038	-0.182	0.204	-0.119	0.204	-0.121	0.941248	1.000000	-
Rv0767c	-	14	208.64	194.95	174.37	180.73	172.77	162.20	0.190	0.094	-0.062	-0.012	-0.075	-0.164	0.975115	1.000000	-
Rv0768	aldA	27	83.57	89.26	97.75	94.47	84.02	81.01	-0.076	0.014	0.138	0.092	-0.068	-0.118	0.948137	1.000000	-
Rv0769	-	17	94.26	87.00	77.12	77.26	75.72	93.90	0.154	0.044	-0.119	-0.117	-0.144	0.149	0.800484	1.000000	-
Rv0770	-	10	194.79	171.23	240.85	179.28	162.69	149.92	0.087	-0.094	0.386	-0.030	-0.166	-0.280	0.379379	1.000000	-
Rv0771	-	10	28.50	29.00	26.49	26.17	33.57	44.28	-0.117	-0.096	-0.206	-0.221	0.086	0.440	0.636379	1.000000	-
Rv0772	purD	24	0.16	0.00	0.00	0.00	0.00	0.00	0.038	-0.008	-0.008	-0.008	-0.008	-0.008	0.601074	1.000000	-
Rv0773c	ggtA	20	38.50	41.88	51.73	41.88	43.08	48.08	-0.177	-0.069	0.206	-0.069	-0.033	0.110	0.892262	1.000000	-
Rv0774c	-	10	136.55	108.37	99.51	107.70	102.83	102.23	0.306	-0.015	-0.132	-0.023	-0.087	-0.095	0.879961	1.000000	-
Rv0775	-	9	528.93	443.99	561.00	468.58	492.68	454.68	0.104	-0.146	0.189	-0.069	0.003	-0.112	0.972236	1.000000	-
Rv0776c	-	15	247.28	222.37	273.99	217.89	230.74	265.44	0.025	-0.125	0.170	-0.154	-0.073	0.125	0.823057	1.000000	-
Rv0777	purB	18	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv0778	cyp126	21	90.35	92.80	82.00	93.56	97.30	90.93	-0.012	0.024	-0.144	0.036	0.089	-0.003	0.979970	1.000000	-
Rv0779c	-	8	79.68	78.33	56.20	59.12	65.73	74.28	0.197	0.173	-0.272	-0.205	-0.063	0.102	0.575508	1.000000	-
Rv0780	hemH	26	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv0781	ptrBa	26	24.54	22.75	31.48	23.11	27.56	17.15	0.006	-0.085	0.310	-0.066	0.146	-0.410	0.370539	1.000000	-
Rv0782	ptrBb	45	33.81	25.87	37.70	34.94	34.06	28.33	0.051	-0.279	0.189	0.093	0.061	-0.168	0.722076	1.000000	-
Rv0783c	emrB	27	57.00	52.53	49.28	45.07	45.76	43.35	0.204	0.096	0.012	-0.104	-0.085	-0.155	0.803839	1.000000	-
Rv0784	-	10	64.95	29.29	111.19	63.42	86.33	38.17	-0.013	-1.041	0.720	-0.044	0.372	-0.709	0.015531	0.255008	-
Rv0785	-	35	58.91	55.38	65.02	46.78	49.72	47.80	0.117	0.035	0.249	-0.187	-0.107	-0.159	0.684371	1.000000	-
Rv0786c	-	11	34.74	32.21	32.43	30.96	34.85	35.71	0.046	-0.048	-0.040	-0.098	0.050	0.081	0.999132	1.000000	-
Rv0787	-	16	125.39	128.27	122.22	123.55	128.70	111.69	0.023	0.055	-0.012	0.003	0.059	-0.137	0.993538	1.000000	-
Rv0787A	-	2	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv0788	purQ	12	0.65	0.42	0.52	0.00	0.38	0.39	0.067	0.006	0.035	-0.109	-0.005	-0.000	0.919703	1.000000	-
Rv0789c	-	7	51.28	53.79	56.86	54.69	42.54	51.90	-0.014	0.048	0.122	0.070	-0.258	0.001	0.979997	1.000000	-
Rv0790c	-	21	105.93	90.68	91.70	114.55	102.56	99.36	0.068	-0.145	-0.130	0.176	0.024	-0.020	0.958840	1.000000	-
Rv0791c	-	13	72.35	109.18	97.40	102.68	108.08	101.65	-0.421	0.141	-0.016	0.056	0.127	0.042	0.870519	1.000000	-
Rv0792c	-	19	105.74	136.19	97.70	116.84	105.68	123.73	-0.108	0.243	-0.216	0.030	-0.108	0.110	0.843991	1.000000	-
Rv0793	-	8	228.93	232.10	239.05	248.41	221.86	222.93	-0.020	-0.001	0.041	0.095	-0.064	-0.058	0.987799	1.000000	-
Rv0794c	-	20	191.06	135.51	142.68	148.49	160.34	154.97	0.289	-0.192	-0.120	-0.065	0.043	-0.005	0.642127	1.000000	-
Rv0795	-	4	229.60	235.36	211.45	247.83	223.15	172.54	0.060	0.095	-0.056	0.168	0.020	-0.342	0.911638	1.000000	-
Rv0796	-	25	296.13	315.33	336.56	322.45	290.54	304.31	-0.069	0.020	0.113	0.052	-0.096	-0.030	0.943214	1.000000	-
Rv0797	-	13	157.24	166.09	172.62	187.92	179.57	186.28	-0.149	-0.073	-0.019	0.100	0.037	0.088	0.838865	1.000000	-
Rv0798c	cfp29	16	76.28	72.05	68.75	70.66	69.44	87.43	0.039	-0.038	-0.101	-0.064	-0.088	0.225	0.963448	1.000000	-
Rv0799c	-	10	49.97	63.50	48.86	58.04	63.79	57.75	-0.173	0.144	-0.203	0.024	0.150	0.018	0.984325	1.000000	-
Rv0800	pepC	16	132.83	142.52	126.38	129.86	139.71	107.75	0.032	0.130	-0.038	0.000	0.102	-0.258	0.937063	1.000000	-
Rv0801	-	1	78.94	101.50	102.65	103.94	150.80	117.60	-0.445	-0.101	-0.086	-0.069	0.448	0.102	1.000000	1.000000	TA sites <= 1
Rv0802c	-	16	77.76	67.30	69.90	65.39	61.19	64.25	0.188	-0.007	0.044	-0.045	-0.134	-0.069	0.943147	1.000000	-
Rv0803	purL	35	1.08	1.17	1.24	1.58	1.01	0.71	-0.013	0.009	0.026	0.101	-0.030	-0.102	0.985210	1.000000	-
Rv0804	-	7	179.13	203.98	180.49	201.61	193.42	156.58	-0.052	0.131	-0.041	0.114	0.056	-0.240	0.924413	1.000000	-
Rv0805	-	18	181.18	148.45	165.20	99.93	111.02	148.74	0.337	0.058	0.207	-0.490	-0.346	0.061	0.005282	0.104334	-
Rv0806c	cpsY	42	115.44	134.37	92.76	156.98	128.03	132.86	-0.129	0.081	-0.430	0.298	0.014	0.065	0.080126	0.908247	-
Rv0807	-	2	58.77	86.22	104.37	78.92	92.43	58.08	-0.411	0.105	0.367	-0.015	0.200	-0.427	0.745262	1.000000	-
Rv0808	purF	27	6.74	11.38	7.05	8.58	11.16	8.94	-0.251	0.229	-0.214	-0.041	0.210	-0.004	0.943577	1.000000	-
Rv0809	purM	14	0.00	0.00	0.00	0.00	1.03	0.00	-0.049	-0.049	-0.049	-0.049	0.222	-0.049	0.307721	1.000000	-
Rv0810c	-	4	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv0811c	-	17	10.04	2.09	6.44	4.86	1.75	6.51	0.549	-0.536	0.154	-0.061	-0.607	0.163	0.682604	1.000000	-
Rv0812	-	17	9.28	8.61	10.32	8.26	10.39	8.17	0.011	-0.058	0.113	-0.096	0.119	-0.106	0.999394	1.000000	-
Rv0813c	-	13	213.01	205.47	243.72	247.46	210.86	238.19	-0.086	-0.137	0.104	0.125	-0.101	0.071	0.707891	1.000000	-
Rv0814c	sseC2	3	474.73	476.51	638.99	510.59	476.24	394.17	-0.060	-0.055	0.365	0.044	-0.056	-0.326	0.837438	1.000000	-
Rv0815c	cysA2	15	166.48	177.80	177.12	183.30	186.26	183.67	-0.103	-0.010	-0.016	0.033	0.055	0.035	0.999616	1.000000	-
Rv0816c	thiX	3	171.68	125.86	137.63	117.36	91.42	61.02	0.528	0.095	0.220	-0.002	-0.345	-0.892	0.463873	1.000000	-
Rv0817c	-	16	19.88	16.26	14.08	18.51	20.69	10.20	0.204	-0.023	-0.179	0.122	0.250	-0.507	0.989475	1.000000	-
Rv0818	-	11	215.56	209.55	243.62	371.04	459.80	183.49	-0.372	-0.412	-0.200	0.397	0.703	-0.599	0.000008	0.000308	-
Rv0819	-	14	120.13	87.42	110.89	79.01	126.34	81.57	0.241	-0.196	0.130	-0.334	0.311	-0.291	0.540359	1.000000	-
Rv0820	phoT	12	22.73	32.92	39.10	71.27	128.84	28.14	-1.085	-0.634	-0.416	0.375	1.186	-0.828	0.000000	0.000000	-
Rv0821c	phoY2	6	25.35	27.20	45.31	35.88	29.92	43.24	-0.380	-0.294	0.350	0.050	-0.177	0.289	0.045818	0.587826	-
Rv0822c	-	29	167.04	159.02	167.40	160.64	165.74	184.71	-0.003	-0.072	-0.000	-0.058	-0.014	0.138	0.983208	1.000000	-
Rv0823c	-	17	282.92	252.03	287.19	257.92	253.11	276.77	0.075	-0.089	0.096	-0.056	-0.083	0.044	0.995537	1.000000	-
Rv0824c	desA1	19	0.00	0.00	0.00	0.00	0.00	0.28	-0.014	-0.014	-0.014	-0.014	-0.014	0.066	0.307323	1.000000	-
Rv0825c	-	10	174.29	182.38	172.49	182.28	158.14	167.09	0.012	0.076	-0.002	0.075	-0.124	-0.047	0.945260	1.000000	-
Rv0826	-	22	234.81	224.64	258.23	233.07	232.24	229.09	-0.003	-0.066	0.131	-0.014	-0.019	-0.038	0.990633	1.000000	-
Rv0827c	-	7	112.27	110.08	124.61	113.44	96.15	146.10	-0.058	-0.086	0.086	-0.044	-0.272	0.307	0.899946	1.000000	-
Rv0828c	-	10	150.02	146.01	131.73	132.30	149.28	139.09	0.082	0.045	-0.099	-0.093	0.076	-0.023	0.990695	1.000000	-
Rv0829	-	4	188.84	221.58	214.21	196.30	204.61	203.18	-0.114	0.111	0.063	-0.060	-0.001	-0.011	0.999028	1.000000	-
Rv0830	-	20	242.92	218.29	231.38	252.43	233.63	251.50	0.027	-0.124	-0.042	0.081	-0.028	0.076	0.931132	1.000000	-
Rv0831c	-	19	162.93	187.65	176.92	162.51	175.27	193.83	-0.112	0.086	0.003	-0.116	-0.010	0.131	0.807623	1.000000	-
Rv0832	PE_PGRS12	4	375.26	416.37	311.21	417.95	370.20	309.71	0.033	0.181	-0.234	0.186	0.013	-0.240	0.937883	1.000000	-
Rv0833	PE_PGRS13	11	63.33	71.80	69.45	54.26	70.28	55.95	-0.018	0.151	0.106	-0.223	0.122	-0.183	0.959514	1.000000	-
Rv0834c	PE_PGRS14	27	153.51	184.55	158.33	157.39	145.06	150.66	-0.043	0.215	0.001	-0.008	-0.121	-0.069	0.722396	1.000000	-
Rv0835	lpqQ	14	91.28	90.85	92.62	106.94	86.26	109.57	-0.073	-0.079	-0.053	0.145	-0.150	0.178	0.910910	1.000000	-
Rv0836c	-	9	208.52	191.44	174.47	176.67	183.56	159.36	0.189	0.068	-0.062	-0.044	0.009	-0.189	0.994260	1.000000	-
Rv0837c	-	23	186.31	208.50	217.11	219.18	208.53	198.37	-0.144	0.015	0.072	0.085	0.015	-0.055	0.925454	1.000000	-
Rv0838	lpqR	7	162.22	167.06	153.44	144.08	167.84	176.40	0.003	0.044	-0.075	-0.162	0.051	0.121	0.900126	1.000000	-
Rv0839	-	14	135.48	160.28	148.94	162.30	152.18	144.01	-0.147	0.088	-0.015	0.105	0.015	-0.062	0.962978	1.000000	-
Rv0840c	pip	9	45.93	37.21	20.91	24.00	31.69	24.11	0.515	0.244	-0.460	-0.297	0.042	-0.292	0.604236	1.000000	-
Rv0841	-	3	163.85	198.45	162.48	146.58	223.14	202.41	-0.154	0.115	-0.165	-0.309	0.281	0.143	0.929041	1.000000	-
Rv0842	-	24	82.37	102.17	85.24	93.49	93.49	97.57	-0.157	0.138	-0.110	0.016	0.016	0.075	0.929533	1.000000	-
Rv0843	-	18	104.65	128.47	109.92	120.44	110.34	127.97	-0.154	0.130	-0.086	0.041	-0.081	0.125	0.913458	1.000000	-
Rv0844c	narL	9	569.52	444.11	444.36	481.15	485.20	421.33	0.261	-0.094	-0.093	0.021	0.033	-0.169	0.461200	1.000000	-
Rv0845	-	27	75.20	78.43	77.18	67.15	81.66	72.77	-0.004	0.053	0.032	-0.156	0.108	-0.048	0.977016	1.000000	-
Rv0846c	-	31	48.84	57.97	57.78	49.85	54.22	59.53	-0.149	0.077	0.073	-0.122	-0.012	0.112	0.894262	1.000000	-
Rv0847	lpqS	6	239.77	205.27	215.04	227.52	172.68	180.28	0.209	-0.010	0.055	0.135	-0.253	-0.193	0.968946	1.000000	-
Rv0848	cysK2	28	62.74	57.90	72.44	63.75	66.60	60.44	-0.026	-0.133	0.167	-0.005	0.054	-0.076	0.960404	1.000000	-
Rv0849	-	23	113.97	120.68	112.37	110.59	105.43	117.47	0.007	0.086	-0.013	-0.035	-0.101	0.049	0.989136	1.000000	-
Rv0850	-	9	61.91	84.26	63.20	58.32	64.10	63.85	-0.084	0.331	-0.057	-0.164	-0.038	-0.043	0.869569	1.000000	-
Rv0851c	-	9	100.61	81.27	106.61	86.42	118.98	80.94	0.067	-0.225	0.147	-0.141	0.299	-0.230	0.965210	1.000000	-
Rv0852	fadD16	15	67.16	62.73	54.64	56.10	68.82	82.21	0.038	-0.053	-0.237	-0.202	0.071	0.311	0.538679	1.000000	-
Rv0853c	pdc	26	97.02	98.50	106.55	120.23	95.77	109.71	-0.104	-0.083	0.025	0.192	-0.122	0.065	0.893262	1.000000	-
Rv0854	-	6	112.07	100.40	108.96	96.62	96.23	121.29	0.078	-0.074	0.039	-0.126	-0.132	0.187	0.996629	1.000000	-
Rv0855	far	13	89.62	86.54	90.49	102.47	77.16	106.00	-0.037	-0.084	-0.023	0.147	-0.240	0.194	0.835777	1.000000	-
Rv0856	-	5	81.48	94.64	65.04	98.65	96.37	124.98	-0.188	0.016	-0.492	0.073	0.041	0.400	0.609485	1.000000	-
Rv0857	-	8	213.79	206.48	181.01	158.63	166.98	209.22	0.171	0.122	-0.063	-0.248	-0.176	0.140	0.569017	1.000000	-
Rv0858c	-	21	170.09	207.31	182.85	198.11	164.99	174.82	-0.103	0.175	-0.001	0.111	-0.145	-0.064	0.708584	1.000000	-
Rv0859	fadA	8	275.33	261.62	254.19	294.42	263.12	226.68	0.067	-0.005	-0.046	0.162	0.003	-0.208	0.983912	1.000000	-
Rv0860	fadB	27	83.94	91.20	83.80	77.74	71.70	86.18	0.025	0.138	0.023	-0.079	-0.189	0.061	0.893016	1.000000	-
Rv0861c	ercc3	26	85.68	72.91	97.18	87.80	86.52	90.01	-0.016	-0.235	0.156	0.017	-0.003	0.051	0.907376	1.000000	-
Rv0862c	-	29	128.61	106.56	122.80	128.18	110.18	106.65	0.129	-0.131	0.065	0.125	-0.085	-0.130	0.905282	1.000000	-
Rv0863	-	6	117.48	112.93	103.32	133.69	113.71	154.76	-0.060	-0.114	-0.237	0.120	-0.105	0.324	0.955560	1.000000	-
Rv0864	moaC	11	213.86	223.96	214.77	280.29	225.87	218.05	-0.099	-0.034	-0.093	0.283	-0.022	-0.072	0.932282	1.000000	-
Rv0865	mog	8	143.88	144.86	135.26	137.81	140.45	160.59	0.001	0.010	-0.085	-0.059	-0.033	0.154	0.996561	1.000000	-
Rv0866	moaE2	3	125.79	95.25	134.18	129.83	115.48	127.62	0.050	-0.334	0.139	0.094	-0.069	0.070	0.966215	1.000000	-
Rv0867c	rpfA	12	183.61	193.86	191.20	182.78	174.54	198.31	-0.029	0.048	0.028	-0.035	-0.100	0.080	0.998854	1.000000	-
Rv0868c	moaD2	6	224.17	289.90	206.56	225.36	217.49	275.17	-0.095	0.269	-0.210	-0.088	-0.138	0.195	0.826011	1.000000	-
Rv0869c	moaA	14	205.03	200.78	231.76	198.24	230.41	191.12	-0.031	-0.060	0.142	-0.078	0.134	-0.130	0.986893	1.000000	-
Rv0870c	-	6	202.59	135.32	160.55	141.81	144.33	188.67	0.312	-0.253	-0.014	-0.188	-0.163	0.212	0.839741	1.000000	-
Rv0871	cspB	4	167.99	166.01	106.40	47.80	40.59	196.55	0.459	0.442	-0.176	-1.254	-1.465	0.679	0.005188	0.102976	-
Rv0872c	PE_PGRS15	27	281.14	274.68	268.94	251.49	232.62	246.07	0.115	0.082	0.052	-0.043	-0.153	-0.073	0.935763	1.000000	-
Rv0873	fadE10	34	190.84	200.48	204.40	125.65	122.74	197.17	0.133	0.203	0.230	-0.451	-0.483	0.179	0.011452	0.201295	-
Rv0874c	-	9	286.79	230.71	255.19	280.40	231.10	261.54	0.152	-0.156	-0.013	0.120	-0.154	0.021	0.991840	1.000000	-
Rv0875c	-	12	128.93	168.73	142.88	107.30	81.54	151.49	-0.013	0.362	0.130	-0.267	-0.643	0.212	0.062097	0.750114	-
Rv0876c	-	26	135.13	159.72	132.22	107.16	105.52	124.60	0.082	0.315	0.052	-0.239	-0.261	-0.031	0.189703	1.000000	-
Rv0877	-	15	362.23	275.94	327.44	221.35	180.03	235.08	0.433	0.047	0.289	-0.265	-0.556	-0.180	0.010680	0.192380	-
Rv0878c	PPE13	19	93.76	97.99	94.38	90.17	80.00	90.14	0.040	0.100	0.049	-0.014	-0.177	-0.014	0.997039	1.000000	-
Rv0879c	-	3	34.52	61.18	69.78	40.62	93.50	87.10	-0.813	-0.070	0.107	-0.606	0.504	0.407	0.461443	1.000000	-
Rv0880	-	1	26.23	25.40	28.10	27.60	29.75	20.25	0.001	-0.039	0.084	0.062	0.154	-0.306	1.000000	1.000000	TA sites <= 1
Rv0881	-	15	115.81	131.37	120.72	134.50	118.12	146.87	-0.138	0.037	-0.080	0.070	-0.110	0.193	0.710578	1.000000	-
Rv0882	-	1	138.94	244.50	311.34	303.77	127.15	140.46	-0.586	0.208	0.550	0.515	-0.709	-0.571	1.000000	1.000000	TA sites <= 1
Rv0883c	-	6	0.64	1.70	3.16	0.82	1.96	2.47	-0.267	-0.020	0.265	-0.222	0.035	0.137	0.830812	1.000000	-
Rv0884c	serC	12	14.68	15.38	15.53	21.19	37.13	5.78	-0.243	-0.192	-0.181	0.170	0.856	-1.111	0.158890	1.000000	-
Rv0885	-	14	81.59	78.99	90.48	84.69	94.73	83.40	-0.066	-0.110	0.075	-0.015	0.138	-0.036	0.980992	1.000000	-
Rv0886	fprB	26	160.87	147.43	160.64	144.45	166.55	149.83	0.052	-0.070	0.050	-0.098	0.101	-0.047	0.945001	1.000000	-
Rv0887c	-	4	62.80	33.01	53.05	53.82	64.99	63.68	0.171	-0.664	-0.053	-0.034	0.217	0.189	0.520180	1.000000	-
Rv0888	-	31	113.34	94.52	106.16	113.23	105.85	96.39	0.106	-0.143	0.016	0.105	0.012	-0.117	0.942132	1.000000	-
Rv0889c	citA	13	172.20	158.96	198.47	138.96	156.32	135.62	0.102	-0.010	0.302	-0.198	-0.033	-0.231	0.568601	1.000000	-
Rv0890c	-	48	244.43	231.94	244.62	228.59	229.85	218.94	0.067	-0.007	0.068	-0.027	-0.020	-0.088	0.969166	1.000000	-
Rv0891c	-	25	131.04	123.47	143.50	137.02	135.91	136.57	-0.037	-0.120	0.089	0.025	0.014	0.020	0.965334	1.000000	-
Rv0892	-	43	54.35	56.89	64.25	59.89	47.90	56.45	-0.054	0.006	0.168	0.074	-0.220	-0.004	0.620059	1.000000	-
Rv0893c	-	24	31.50	26.76	36.06	29.22	23.77	30.83	0.074	-0.127	0.243	-0.019	-0.270	0.047	0.726116	1.000000	-
Rv0894	-	18	48.21	56.79	51.72	46.05	39.69	55.06	-0.037	0.179	0.055	-0.097	-0.289	0.138	0.959844	1.000000	-
Rv0895	-	28	215.33	186.05	204.00	184.23	197.00	193.12	0.128	-0.078	0.052	-0.092	0.003	-0.025	0.827760	1.000000	-
Rv0896	gltA	28	25.90	8.51	33.29	3.42	5.32	5.59	0.727	-0.467	1.036	-1.148	-0.855	-0.818	0.000000	0.000000	-
Rv0897c	-	20	157.61	133.66	154.48	142.94	140.37	138.48	0.120	-0.109	0.092	-0.016	-0.041	-0.060	0.975897	1.000000	-
Rv0898c	-	1	332.28	233.90	431.24	334.74	402.40	283.01	-0.017	-0.514	0.354	-0.006	0.256	-0.245	1.000000	1.000000	TA sites <= 1
Rv0899	ompA	19	61.55	58.34	61.78	51.23	42.65	52.92	0.156	0.084	0.161	-0.087	-0.326	-0.045	0.700478	1.000000	-
Rv0900	-	2	177.19	132.25	195.24	206.55	189.45	239.76	-0.099	-0.507	0.038	0.117	-0.005	0.327	0.271624	1.000000	-
Rv0901	-	9	210.76	174.77	219.75	189.01	257.74	200.15	0.014	-0.249	0.073	-0.139	0.298	-0.059	0.833046	1.000000	-
Rv0902c	prrB	14	27.66	18.11	27.32	11.29	20.55	15.64	0.380	-0.119	0.365	-0.624	0.026	-0.282	0.749428	1.000000	-
Rv0903c	prrA	10	28.58	12.71	24.14	16.27	17.41	22.84	0.407	-0.516	0.203	-0.252	-0.176	0.136	0.913813	1.000000	-
Rv0904c	accD3	24	82.65	87.98	84.77	57.58	72.16	75.32	0.101	0.186	0.135	-0.385	-0.083	-0.025	0.190496	1.000000	-
Rv0905	echA6	9	101.90	114.63	118.71	87.42	99.37	153.51	-0.138	0.025	0.073	-0.347	-0.172	0.431	0.623544	1.000000	-
Rv0906	-	15	207.48	210.93	197.61	204.47	198.37	170.65	0.064	0.087	-0.005	0.043	0.001	-0.211	0.951006	1.000000	-
Rv0907	-	40	41.84	44.81	50.31	43.50	44.79	41.93	-0.081	0.008	0.159	-0.030	0.007	-0.078	0.886103	1.000000	-
Rv0908	ctpE	30	124.20	113.97	108.83	116.30	121.56	116.15	0.085	-0.034	-0.098	-0.006	0.055	-0.008	0.994687	1.000000	-
Rv0909	-	2	3.77	12.70	10.90	7.03	9.48	17.53	-0.797	0.216	0.062	-0.340	-0.074	0.564	0.553429	1.000000	-
Rv0910	-	7	19.13	32.14	18.75	33.69	43.68	31.26	-0.527	0.095	-0.550	0.154	0.485	0.060	0.554140	1.000000	-
Rv0911	-	15	41.00	36.91	34.64	43.77	32.36	36.49	0.113	-0.021	-0.101	0.198	-0.187	-0.036	0.790808	1.000000	-
Rv0912	-	4	254.41	126.74	217.21	187.16	253.82	167.72	0.331	-0.646	0.108	-0.102	0.328	-0.255	0.364098	1.000000	-
Rv0913c	-	41	31.36	33.51	34.37	23.58	26.21	23.27	0.109	0.192	0.224	-0.239	-0.111	-0.254	0.408681	1.000000	-
Rv0914c	-	17	176.44	178.78	146.52	182.06	156.71	158.81	0.081	0.099	-0.179	0.125	-0.085	-0.067	0.956650	1.000000	-
Rv0915c	PPE14	19	122.93	123.86	96.43	119.56	100.92	99.26	0.148	0.158	-0.187	0.109	-0.125	-0.148	0.891524	1.000000	-
Rv0916c	PE7	5	118.29	89.65	77.42	110.65	88.81	88.65	0.294	-0.088	-0.287	0.201	-0.100	-0.103	0.722181	1.000000	-
Rv0917	betP	42	120.39	101.73	102.94	101.11	107.10	95.72	0.191	-0.041	-0.025	-0.050	0.030	-0.125	0.897336	1.000000	-
Rv0918	-	8	240.23	236.00	280.01	204.12	235.06	246.23	-0.000	-0.025	0.217	-0.230	-0.031	0.035	0.829181	1.000000	-
Rv0919	-	10	220.62	227.14	213.78	238.76	236.90	222.85	-0.038	0.003	-0.083	0.073	0.062	-0.024	0.998754	1.000000	-
Rv0920c	-	22	80.11	78.97	81.85	82.13	81.61	74.22	0.005	-0.014	0.034	0.039	0.030	-0.099	0.998338	1.000000	-
Rv0921	-	7	80.29	80.10	67.43	88.98	76.83	72.47	0.045	0.042	-0.191	0.185	-0.015	-0.094	0.962127	1.000000	-
Rv0922	-	18	132.23	141.96	123.36	131.25	126.73	128.24	0.017	0.116	-0.079	0.007	-0.042	-0.026	0.991921	1.000000	-
Rv0923c	-	21	181.45	164.28	172.58	164.41	180.07	149.99	0.101	-0.038	0.031	-0.037	0.091	-0.165	0.972302	1.000000	-
Rv0924c	mntH	20	99.12	97.98	88.14	125.80	132.61	125.21	-0.162	-0.178	-0.323	0.167	0.241	0.161	0.339261	1.000000	-
Rv0925c	-	17	163.57	144.83	146.68	149.22	166.23	169.68	0.060	-0.110	-0.092	-0.068	0.083	0.111	0.927891	1.000000	-
Rv0926c	-	21	92.93	99.77	102.44	94.94	105.98	89.32	-0.067	0.031	0.067	-0.037	0.114	-0.121	0.900052	1.000000	-
Rv0927c	-	6	216.75	99.98	202.63	171.49	161.29	158.92	0.354	-0.725	0.259	0.025	-0.061	-0.082	0.145633	1.000000	-
Rv0928	pstS3	22	19.96	31.33	43.04	75.21	107.97	25.92	-1.155	-0.613	-0.210	0.529	1.024	-0.846	0.000000	0.000006	-
Rv0929	pstC2	17	24.70	31.43	35.32	62.77	115.08	19.54	-0.839	-0.545	-0.398	0.351	1.176	-1.115	0.000000	0.000000	-
Rv0930	pstA1	17	21.54	32.84	33.70	59.85	115.33	31.06	-1.026	-0.515	-0.482	0.263	1.155	-0.584	0.000000	0.000001	-
Rv0931c	pknD	45	150.40	158.64	147.88	152.31	154.12	148.60	-0.015	0.060	-0.038	0.003	0.019	-0.032	0.998771	1.000000	-
Rv0932c	pstS2	25	47.38	57.61	49.30	67.78	70.67	58.05	-0.277	-0.020	-0.225	0.198	0.254	-0.009	0.428530	1.000000	-
Rv0933	pstB	12	94.35	96.93	94.86	92.64	85.05	113.22	-0.026	0.011	-0.019	-0.051	-0.168	0.225	0.896414	1.000000	-
Rv0934	pstS1	21	188.48	190.10	206.69	176.98	205.67	175.13	-0.015	-0.003	0.115	-0.103	0.108	-0.118	0.894755	1.000000	-
Rv0935	pstC1	12	180.53	149.23	171.96	185.31	166.91	143.34	0.116	-0.151	0.048	0.153	0.006	-0.207	0.952666	1.000000	-
Rv0936	pstA2	20	87.49	97.80	86.36	100.09	87.17	97.18	-0.079	0.074	-0.096	0.105	-0.084	0.065	0.952528	1.000000	-
Rv0937c	-	12	24.00	15.73	19.55	22.99	17.36	23.02	0.189	-0.296	-0.051	0.138	-0.186	0.139	0.578489	1.000000	-
Rv0938	-	43	87.88	64.80	75.97	67.90	72.67	71.09	0.245	-0.167	0.047	-0.105	-0.013	-0.043	0.742422	1.000000	-
Rv0939	-	31	65.68	53.44	63.49	70.45	76.88	70.24	-0.021	-0.295	-0.066	0.074	0.192	0.070	0.643121	1.000000	-
Rv0940c	-	15	43.27	41.91	50.94	58.09	41.14	46.11	-0.105	-0.146	0.108	0.281	-0.170	-0.022	0.732959	1.000000	-
Rv0941c	-	9	217.71	189.67	192.37	185.79	195.24	210.95	0.129	-0.065	-0.045	-0.094	-0.024	0.085	0.977992	1.000000	-
Rv0942	-	7	103.33	104.11	77.27	113.66	122.06	119.28	-0.043	-0.033	-0.440	0.088	0.187	0.155	0.600668	1.000000	-
Rv0943c	-	17	104.02	79.67	90.95	104.10	118.08	107.53	0.044	-0.320	-0.140	0.045	0.219	0.090	0.721422	1.000000	-
Rv0944	-	8	122.26	143.97	101.87	125.88	125.39	118.15	-0.007	0.220	-0.259	0.033	0.028	-0.055	0.906087	1.000000	-
Rv0945	-	7	45.37	70.80	69.56	67.01	83.37	79.71	-0.561	0.029	0.005	-0.045	0.250	0.189	0.698850	1.000000	-
Rv0946c	pgi	19	120.34	119.22	117.69	125.95	129.78	95.19	0.027	0.014	-0.004	0.090	0.132	-0.296	0.972243	1.000000	-
Rv0948c	-	6	5.67	7.62	1.05	11.75	13.23	13.03	-0.364	-0.121	-1.182	0.287	0.410	0.394	0.759636	1.000000	-
Rv0949	uvrD1	45	47.58	66.92	57.34	76.86	83.50	58.64	-0.416	0.036	-0.170	0.223	0.335	-0.140	0.002075	0.046779	-
Rv0950c	-	21	107.35	138.83	89.58	129.70	127.91	128.76	-0.158	0.198	-0.406	0.104	0.084	0.094	0.318718	1.000000	-
Rv0951	sucC	16	0.24	0.00	0.00	0.31	0.73	0.34	-0.008	-0.076	-0.076	0.010	0.122	0.018	0.621809	1.000000	-
Rv0952	sucD	11	0.00	0.47	0.00	0.39	0.00	0.43	-0.061	0.069	-0.061	0.048	-0.061	0.057	0.703623	1.000000	-
Rv0953c	-	13	168.78	180.41	171.64	172.35	200.37	177.35	-0.078	0.015	-0.055	-0.049	0.163	-0.009	0.927808	1.000000	-
Rv0954	-	28	160.95	184.33	163.67	169.49	173.49	148.38	-0.049	0.141	-0.026	0.023	0.056	-0.163	0.781304	1.000000	-
Rv0955	-	18	72.97	84.85	75.54	82.23	98.46	88.05	-0.186	0.019	-0.139	-0.024	0.222	0.069	0.881411	1.000000	-
Rv0956	purN	15	11.73	26.58	14.80	29.86	35.80	29.82	-0.831	0.085	-0.588	0.228	0.455	0.226	0.673501	1.000000	-
Rv0957	purH	24	0.16	0.00	0.26	0.00	0.00	0.20	0.016	-0.029	0.044	-0.029	-0.029	0.026	0.666086	1.000000	-
Rv0958	-	15	180.40	226.05	195.77	196.50	185.82	156.27	-0.074	0.244	0.041	0.046	-0.032	-0.275	0.745427	1.000000	-
Rv0959	-	19	129.92	156.37	175.89	128.65	150.43	138.64	-0.169	0.090	0.254	-0.182	0.036	-0.078	0.681107	1.000000	-
Rv0960	-	6	288.68	267.79	232.24	211.88	263.00	225.73	0.214	0.107	-0.094	-0.223	0.082	-0.134	0.983905	1.000000	-
Rv0961	-	7	92.59	87.38	100.12	91.37	86.62	118.61	-0.051	-0.130	0.056	-0.069	-0.142	0.290	0.877633	1.000000	-
Rv0962c	lprP	15	191.08	147.31	147.50	172.78	154.83	138.96	0.260	-0.104	-0.103	0.119	-0.035	-0.186	0.755482	1.000000	-
Rv0963c	-	10	145.48	141.39	152.66	159.80	158.29	137.09	-0.034	-0.074	0.033	0.097	0.083	-0.117	0.991458	1.000000	-
Rv0964c	-	5	179.95	180.67	188.00	226.19	180.32	194.31	-0.088	-0.082	-0.026	0.234	-0.085	0.020	0.987127	1.000000	-
Rv0965c	-	7	197.28	129.11	150.32	144.36	120.05	150.92	0.396	-0.196	0.015	-0.041	-0.297	0.021	0.653799	1.000000	-
Rv0966c	-	9	286.55	227.76	247.27	263.44	262.01	223.42	0.183	-0.141	-0.025	0.064	0.057	-0.169	0.915124	1.000000	-
Rv0967	-	1	114.77	193.55	165.75	177.47	224.55	298.56	-0.745	-0.016	-0.234	-0.138	0.193	0.596	1.000000	1.000000	TA sites <= 1
Rv0968	-	6	269.34	354.66	356.11	359.26	321.47	293.99	-0.270	0.121	0.126	0.139	-0.019	-0.146	0.976699	1.000000	-
Rv0969	ctpV	21	240.94	240.99	221.57	207.18	214.33	212.55	0.110	0.110	-0.009	-0.103	-0.055	-0.067	0.938502	1.000000	-
Rv0970	-	12	64.77	53.05	52.09	51.02	52.26	69.81	0.166	-0.099	-0.123	-0.150	-0.119	0.267	0.799223	1.000000	-
Rv0971c	echA7	6	145.03	140.98	184.06	170.88	173.05	151.26	-0.145	-0.184	0.189	0.084	0.102	-0.086	0.948640	1.000000	-
Rv0972c	fadE12	18	97.77	77.79	107.30	85.29	101.02	73.63	0.106	-0.206	0.234	-0.080	0.151	-0.280	0.497413	1.000000	-
Rv0973c	accA2	25	55.30	46.72	56.48	38.97	40.75	34.11	0.259	0.038	0.287	-0.196	-0.139	-0.366	0.422145	1.000000	-
Rv0974c	accD2	20	44.62	43.84	45.42	40.45	45.12	39.56	0.043	0.020	0.066	-0.084	0.057	-0.112	0.989965	1.000000	-
Rv0975c	fadE13	20	126.97	117.77	108.75	117.09	123.45	105.83	0.118	0.013	-0.097	0.005	0.079	-0.134	0.980987	1.000000	-
Rv0976c	-	20	184.71	165.93	184.17	174.22	164.26	183.21	0.067	-0.083	0.063	-0.015	-0.097	0.056	0.982283	1.000000	-
Rv0977	PE_PGRS16	32	143.50	145.90	150.44	141.94	137.68	130.34	0.018	0.041	0.084	0.003	-0.039	-0.116	0.997345	1.000000	-
Rv0978c	PE_PGRS17	10	508.33	482.63	474.95	425.08	415.75	399.57	0.171	0.097	0.074	-0.085	-0.116	-0.173	0.916847	1.000000	-
Rv0979c	-	2	92.84	74.00	54.77	209.42	200.30	112.03	-0.398	-0.706	-1.109	0.734	0.672	-0.139	0.151208	1.000000	-
Rv0979A	rpmF	2	8.55	45.67	24.95	23.47	16.23	63.35	-1.384	0.519	-0.240	-0.313	-0.737	0.950	0.446732	1.000000	-
Rv0980c	PE_PGRS18	17	384.66	356.45	366.71	378.93	305.25	297.81	0.141	0.033	0.073	0.120	-0.187	-0.222	0.854706	1.000000	-
Rv0981	mprA	11	364.00	385.63	361.95	351.14	345.84	350.67	0.016	0.098	0.008	-0.035	-0.057	-0.037	0.994670	1.000000	-
Rv0982	mprB	22	17.54	24.97	22.42	33.14	27.12	23.52	-0.402	0.009	-0.120	0.357	0.109	-0.063	0.980913	1.000000	-
Rv0983	pepD	19	67.51	76.28	51.80	65.03	61.97	81.42	0.003	0.168	-0.349	-0.047	-0.111	0.257	0.593311	1.000000	-
Rv0984	moaB2	5	168.85	142.41	135.57	117.19	141.23	161.62	0.218	-0.020	-0.089	-0.291	-0.032	0.157	0.973211	1.000000	-
Rv0985c	mscL	9	79.59	86.75	59.60	65.24	68.18	114.95	0.009	0.127	-0.380	-0.259	-0.200	0.513	0.218259	1.000000	-
Rv0986	-	25	22.54	21.21	29.78	26.89	26.89	32.11	-0.197	-0.269	0.140	0.015	0.015	0.233	0.443689	1.000000	-
Rv0987	-	94	25.58	22.51	28.83	29.18	26.71	31.30	-0.081	-0.234	0.064	0.079	-0.029	0.166	0.349279	1.000000	-
Rv0988	-	41	11.69	18.73	16.44	17.16	17.62	18.20	-0.375	0.133	-0.013	0.034	0.064	0.101	0.419898	1.000000	-
Rv0989c	grcC2	18	163.95	157.22	162.69	156.72	153.30	182.55	0.010	-0.048	-0.000	-0.053	-0.084	0.161	0.978062	1.000000	-
Rv0990c	-	8	108.33	92.43	88.59	145.70	94.63	118.60	0.004	-0.215	-0.273	0.415	-0.182	0.129	0.777471	1.000000	-
Rv0991c	-	3	383.66	339.19	304.67	302.94	352.44	400.65	0.142	-0.033	-0.186	-0.194	0.021	0.204	0.976733	1.000000	-
Rv0992c	-	6	496.41	492.45	510.16	413.65	470.85	390.57	0.101	0.090	0.141	-0.159	0.026	-0.241	0.938065	1.000000	-
Rv0993	galU	14	0.39	0.00	0.00	0.00	0.00	0.00	0.090	-0.019	-0.019	-0.019	-0.019	-0.019	0.603065	1.000000	-
Rv0994	moeA1	14	239.23	188.33	233.00	152.54	184.97	182.20	0.276	-0.061	0.239	-0.357	-0.087	-0.108	0.210140	1.000000	-
Rv0995	rimJ	5	109.44	79.37	90.60	66.15	110.63	107.16	0.211	-0.229	-0.049	-0.475	0.226	0.182	0.636736	1.000000	-
Rv0996	-	17	253.41	250.67	212.95	238.13	257.48	211.40	0.093	0.077	-0.153	0.005	0.115	-0.163	0.875577	1.000000	-
Rv0997	-	6	220.06	179.26	212.18	193.76	256.34	161.36	0.108	-0.181	0.057	-0.071	0.324	-0.328	0.897647	1.000000	-
Rv0998	-	13	69.09	72.12	73.01	68.31	71.90	80.22	-0.064	-0.006	0.010	-0.079	-0.010	0.138	0.991344	1.000000	-
Rv0999	-	11	274.11	300.56	241.49	257.65	300.86	283.94	-0.012	0.119	-0.191	-0.100	0.120	0.038	0.925031	1.000000	-
Rv1000c	-	8	449.74	375.01	403.34	420.59	369.48	393.60	0.160	-0.099	0.005	0.065	-0.120	-0.030	0.988660	1.000000	-
Rv1001	arcA	20	245.06	258.48	268.28	269.56	253.93	243.49	-0.064	0.011	0.064	0.070	-0.014	-0.073	0.995166	1.000000	-
Rv1002c	-	24	17.84	23.26	13.91	13.47	13.73	15.52	0.101	0.409	-0.171	-0.205	-0.185	-0.053	0.213567	1.000000	-
Rv1003	-	8	79.32	116.01	109.62	94.71	96.83	132.62	-0.382	0.140	0.061	-0.140	-0.109	0.325	0.090084	0.990181	-
Rv1004c	-	12	186.14	181.31	178.69	187.17	181.65	162.75	0.050	0.013	-0.007	0.058	0.016	-0.138	0.998411	1.000000	-
Rv1005c	pabB	24	35.06	58.66	40.96	46.52	37.99	36.22	-0.248	0.420	-0.050	0.115	-0.146	-0.207	0.921104	1.000000	-
Rv1006	-	41	174.97	225.91	157.31	236.84	244.08	196.99	-0.230	0.130	-0.379	0.197	0.239	-0.063	0.000786	0.019610	-
Rv1007c	metG	31	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv1008	tatD	13	281.82	289.50	286.77	297.81	294.59	271.03	-0.025	0.013	-0.001	0.053	0.037	-0.081	0.999465	1.000000	-
Rv1009	rpfB	12	129.36	114.47	112.88	159.87	138.50	120.21	0.002	-0.168	-0.187	0.297	0.096	-0.100	0.796969	1.000000	-
Rv1010	ksgA	12	73.38	80.86	63.62	92.82	119.16	63.81	-0.155	-0.024	-0.347	0.165	0.509	-0.343	0.025378	0.373182	-
Rv1011	ispE	13	0.00	0.00	0.00	0.00	0.00	0.42	-0.020	-0.020	-0.020	-0.020	-0.020	0.095	0.307837	1.000000	-
Rv1012	-	6	116.54	123.51	119.55	105.19	120.60	88.59	0.051	0.131	0.086	-0.091	0.098	-0.326	0.927902	1.000000	-
Rv1013	pks16	21	62.83	120.94	61.14	69.72	83.19	94.37	-0.360	0.533	-0.396	-0.220	0.019	0.191	0.000260	0.007106	-
Rv1014c	pth	11	0.00	0.45	0.00	0.00	0.00	0.00	-0.022	0.104	-0.022	-0.022	-0.022	-0.022	0.308134	1.000000	-
Rv1015c	rplY	10	44.61	45.73	36.24	76.14	73.98	51.02	-0.265	-0.233	-0.532	0.445	0.406	-0.090	0.455491	1.000000	-
Rv1016c	lpqT	6	70.17	95.95	64.82	112.24	99.58	96.33	-0.335	0.090	-0.442	0.306	0.141	0.095	0.869579	1.000000	-
Rv1017c	prsA	12	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv1018c	glmU	24	0.16	0.00	0.00	0.00	0.00	0.23	0.027	-0.018	-0.018	-0.018	-0.018	0.045	0.586592	1.000000	-
Rv1019	-	8	254.05	325.15	314.40	372.01	327.90	296.47	-0.305	0.045	-0.003	0.237	0.057	-0.086	0.548347	1.000000	-
Rv1020	mfd	40	253.51	251.06	248.15	264.68	246.61	224.03	0.031	0.017	0.001	0.092	-0.008	-0.144	0.960657	1.000000	-
Rv1021	-	13	120.66	115.83	121.40	123.14	93.70	117.60	0.062	0.005	0.070	0.090	-0.287	0.026	0.987420	1.000000	-
Rv1022	lpqU	14	85.11	78.48	84.07	81.43	83.88	79.97	0.048	-0.062	0.031	-0.012	0.028	-0.037	0.999851	1.000000	-
Rv1023	eno	16	0.24	0.31	0.00	0.00	0.00	0.00	0.042	0.061	-0.026	-0.026	-0.026	-0.026	0.599167	1.000000	-
Rv1024	-	8	9.41	3.76	3.87	7.14	10.37	1.76	0.383	-0.335	-0.318	0.135	0.476	-0.709	0.777649	1.000000	-
Rv1025	-	6	4.76	2.61	14.52	5.58	7.37	4.95	-0.254	-0.612	0.747	-0.136	0.088	-0.225	0.675847	1.000000	-
Rv1026	-	8	71.66	85.44	57.06	64.06	67.36	71.78	0.040	0.279	-0.265	-0.111	-0.043	0.042	0.804408	1.000000	-
Rv1027c	kdpE	11	66.62	63.49	83.62	53.03	45.85	59.31	0.097	0.032	0.404	-0.207	-0.398	-0.059	0.738917	1.000000	-
Rv1028c	kdpD	28	109.45	100.81	104.77	95.87	81.45	103.16	0.135	0.021	0.074	-0.048	-0.270	0.053	0.878801	1.000000	-
Rv1028A	kdpF	3	97.36	27.43	62.30	67.38	44.20	60.07	0.660	-0.998	0.055	0.160	-0.397	0.006	0.728233	1.000000	-
Rv1029	kdpA	28	128.12	114.23	129.38	118.37	120.55	132.81	0.046	-0.113	0.060	-0.063	-0.038	0.096	0.981049	1.000000	-
Rv1030	kdpB	15	147.65	177.64	181.01	175.12	170.76	180.28	-0.214	0.045	0.071	0.025	-0.011	0.065	0.884683	1.000000	-
Rv1031	kdpC	10	114.13	112.62	131.62	130.70	141.30	108.25	-0.105	-0.123	0.093	0.083	0.192	-0.178	0.772233	1.000000	-
Rv1032c	trcS	25	136.00	101.63	112.88	125.74	121.26	125.22	0.169	-0.235	-0.090	0.060	0.009	0.054	0.757262	1.000000	-
Rv1033c	trcR	15	151.74	185.01	180.90	179.83	183.91	191.66	-0.230	0.048	0.016	0.008	0.039	0.097	0.972560	1.000000	-
Rv1034c	-	2	90.22	121.80	95.50	127.39	68.68	108.03	-0.167	0.246	-0.090	0.308	-0.537	0.080	0.820212	1.000000	-
Rv1035c	-	4	161.69	144.49	84.45	108.95	115.71	98.25	0.428	0.271	-0.470	-0.121	-0.038	-0.263	0.411321	1.000000	-
Rv1036c	-	5	150.69	194.46	196.12	187.91	165.46	196.30	-0.263	0.094	0.106	0.046	-0.132	0.108	0.977354	1.000000	-
Rv1037c	esxI	4	469.31	431.33	434.96	420.88	441.02	447.13	0.090	-0.031	-0.019	-0.066	0.001	0.020	0.998065	1.000000	-
Rv1038c	esxJ	3	258.47	251.88	283.66	194.00	255.60	253.06	0.050	0.014	0.182	-0.355	0.034	0.020	0.567536	1.000000	-
Rv1039c	PPE15	24	132.59	153.39	127.36	137.15	143.71	158.20	-0.096	0.107	-0.152	-0.049	0.016	0.150	0.839828	1.000000	-
Rv1040c	PE8	8	162.67	200.06	200.93	186.88	175.13	174.28	-0.168	0.123	0.129	0.027	-0.064	-0.071	0.957921	1.000000	-
Rv1041c	-	18	264.39	251.65	238.31	263.82	224.27	232.91	0.103	0.033	-0.044	0.100	-0.130	-0.077	0.991147	1.000000	-
Rv1042c	-	6	122.42	134.13	136.59	113.16	105.76	127.20	-0.009	0.118	0.143	-0.118	-0.211	0.044	0.982724	1.000000	-
Rv1043c	-	14	72.42	79.56	89.14	80.44	85.80	92.08	-0.189	-0.061	0.093	-0.047	0.041	0.138	0.927633	1.000000	-
Rv1044	-	13	26.93	33.26	22.90	33.08	27.62	29.34	-0.084	0.177	-0.279	0.170	-0.054	0.021	0.995004	1.000000	-
Rv1045	-	12	226.75	218.26	249.33	239.78	251.08	243.79	-0.069	-0.123	0.065	0.010	0.075	0.033	0.996149	1.000000	-
Rv1046c	-	4	224.24	298.46	292.59	288.46	277.49	254.77	-0.276	0.128	0.100	0.080	0.025	-0.096	0.903654	1.000000	-
Rv1047	-	16	231.90	242.69	263.42	244.43	252.73	238.02	-0.081	-0.016	0.100	-0.006	0.041	-0.044	0.993901	1.000000	-
Rv1048c	-	24	160.52	186.92	152.50	173.27	167.68	175.52	-0.075	0.138	-0.147	0.032	-0.014	0.050	0.924727	1.000000	-
Rv1049	-	4	250.84	259.27	263.78	294.59	288.35	243.65	-0.087	-0.040	-0.016	0.141	0.110	-0.128	0.978854	1.000000	-
Rv1050	-	12	55.74	77.59	80.71	71.26	62.76	72.79	-0.307	0.136	0.190	0.021	-0.149	0.050	0.660049	1.000000	-
Rv1051c	-	8	60.81	69.70	70.76	64.83	70.74	71.07	-0.149	0.034	0.054	-0.064	0.053	0.060	0.997647	1.000000	-
Rv1052	-	6	54.19	66.41	87.93	71.85	85.85	93.65	-0.464	-0.193	0.187	-0.087	0.154	0.273	0.621032	1.000000	-
Rv1053c	-	6	40.04	59.29	59.36	57.61	61.69	70.80	-0.487	0.026	0.028	-0.012	0.079	0.264	0.739969	1.000000	-
Rv1054	-	5	93.88	141.52	149.09	132.68	141.86	149.90	-0.500	0.067	0.140	-0.022	0.071	0.148	0.904953	1.000000	-
Rv1055	-	3	22.95	35.58	72.83	91.62	84.18	56.32	-1.231	-0.692	0.247	0.559	0.444	-0.097	0.019797	0.310992	-
Rv1056	-	22	200.50	205.24	200.90	213.79	188.34	189.79	0.005	0.038	0.008	0.096	-0.083	-0.072	0.989137	1.000000	-
Rv1057	-	19	222.74	218.94	226.96	228.78	225.92	219.35	-0.007	-0.031	0.020	0.031	0.013	-0.028	0.999727	1.000000	-
Rv1058	fadD14	30	99.93	95.23	90.50	84.73	83.36	101.50	0.105	0.039	-0.031	-0.120	-0.143	0.127	0.935090	1.000000	-
Rv1059	-	9	87.12	64.40	58.69	64.23	53.00	71.81	0.365	-0.044	-0.168	-0.047	-0.303	0.102	0.677441	1.000000	-
Rv1060	-	5	121.17	127.59	110.69	150.38	131.76	122.05	-0.068	0.003	-0.193	0.232	0.048	-0.058	0.935665	1.000000	-
Rv1061	-	14	169.14	141.67	181.13	156.23	162.35	182.01	0.031	-0.217	0.127	-0.080	-0.026	0.134	0.968485	1.000000	-
Rv1062	-	6	128.93	132.53	143.28	146.34	165.09	176.56	-0.199	-0.161	-0.053	-0.023	0.145	0.239	0.789777	1.000000	-
Rv1063c	-	15	254.86	234.96	256.22	219.79	205.36	196.89	0.157	0.042	0.165	-0.052	-0.148	-0.207	0.538687	1.000000	-
Rv1064c	lpqV	6	101.00	118.57	132.66	109.80	113.52	142.59	-0.234	-0.013	0.143	-0.119	-0.073	0.243	0.627273	1.000000	-
Rv1065	-	10	390.76	422.92	411.04	359.67	366.47	329.50	0.040	0.152	0.112	-0.079	-0.052	-0.203	0.862103	1.000000	-
Rv1066	-	4	134.07	148.75	208.74	148.40	124.70	138.87	-0.162	-0.017	0.458	-0.020	-0.263	-0.113	0.906044	1.000000	-
Rv1067c	PE_PGRS19	15	296.03	278.23	282.82	268.33	242.70	264.36	0.120	0.032	0.055	-0.020	-0.162	-0.041	0.965585	1.000000	-
Rv1068c	PE_PGRS20	13	193.50	186.74	145.96	172.17	166.80	165.26	0.168	0.118	-0.227	0.004	-0.041	-0.054	0.972654	1.000000	-
Rv1069c	-	20	279.12	285.03	300.56	325.13	315.72	283.94	-0.094	-0.064	0.011	0.123	0.081	-0.070	0.954824	1.000000	-
Rv1070c	echA8	8	176.21	153.83	158.91	186.57	155.87	120.02	0.148	-0.042	0.003	0.228	-0.024	-0.388	0.567899	1.000000	-
Rv1071c	echA9	12	398.87	451.69	446.11	455.83	422.20	330.14	-0.065	0.112	0.095	0.125	0.016	-0.334	0.150599	1.000000	-
Rv1072	-	17	50.17	79.88	57.35	93.67	128.35	72.02	-0.628	-0.006	-0.451	0.211	0.646	-0.146	0.000003	0.000113	-
Rv1073	-	19	217.98	247.70	264.93	258.96	230.73	260.06	-0.175	0.006	0.101	0.068	-0.095	0.074	0.787444	1.000000	-
Rv1074c	fadA3	11	232.80	235.97	243.84	169.40	183.19	223.84	0.113	0.132	0.179	-0.334	-0.224	0.058	0.713914	1.000000	-
Rv1075c	-	18	222.15	218.71	226.11	230.61	217.26	198.54	0.021	-0.001	0.046	0.074	-0.011	-0.138	0.989128	1.000000	-
Rv1076	lipU	21	83.58	93.80	93.01	83.82	85.60	97.25	-0.093	0.064	0.052	-0.090	-0.061	0.114	0.993282	1.000000	-
Rv1077	cbs	27	177.36	170.70	188.82	179.92	163.62	179.13	0.006	-0.048	0.094	0.026	-0.107	0.020	0.978353	1.000000	-
Rv1078	pra	18	15.12	25.47	11.12	14.46	26.72	27.23	-0.314	0.284	-0.634	-0.363	0.342	0.365	0.059170	0.724200	-
Rv1079	metB	18	111.71	105.31	108.07	107.57	103.41	103.86	0.064	-0.018	0.018	0.012	-0.042	-0.037	0.999342	1.000000	-
Rv1080c	greA	9	7.37	12.97	3.50	10.62	18.87	9.59	-0.324	0.215	-0.866	0.012	0.624	-0.086	0.034825	0.479144	-
Rv1081c	-	7	29.04	47.30	19.17	32.55	31.80	41.25	-0.178	0.441	-0.672	-0.037	-0.066	0.264	0.414421	1.000000	-
Rv1082	mca	13	134.79	140.34	138.58	128.12	157.53	159.57	-0.084	-0.028	-0.045	-0.154	0.134	0.152	0.977892	1.000000	-
Rv1083	-	3	34.81	32.25	30.42	34.17	46.35	48.14	-0.101	-0.197	-0.269	-0.124	0.267	0.316	0.625019	1.000000	-
Rv1084	-	26	191.34	175.12	187.85	173.12	174.58	176.64	0.088	-0.037	0.062	-0.053	-0.041	-0.025	0.992455	1.000000	-
Rv1085c	-	11	15.57	15.18	4.85	0.90	1.89	6.56	0.720	0.692	-0.343	-1.083	-0.859	-0.112	0.000000	0.000011	-
Rv1086	-	15	4.87	6.44	9.82	26.98	78.29	1.35	-1.413	-1.201	-0.827	0.282	1.664	-2.050	0.000000	0.000000	-
Rv1087	PE_PGRS21	21	376.77	359.73	321.99	350.87	332.60	338.53	0.118	0.052	-0.105	0.017	-0.059	-0.034	0.977440	1.000000	-
Rv1087A	-	7	149.23	140.64	172.95	168.17	150.57	168.89	-0.083	-0.166	0.123	0.084	-0.071	0.090	0.987383	1.000000	-
Rv1088	PE9	5	28.88	41.69	53.10	71.00	47.10	51.89	-0.671	-0.208	0.107	0.495	-0.050	0.077	0.640001	1.000000	-
Rv1089	PE10	5	56.67	93.78	83.74	114.84	108.68	142.08	-0.767	-0.088	-0.242	0.191	0.115	0.487	0.271128	1.000000	-
Rv1089A	celA2a	2	164.16	225.37	166.02	140.02	205.88	188.86	-0.142	0.303	-0.127	-0.365	0.176	0.054	0.878219	1.000000	-
Rv1090	celA2b	7	150.96	166.11	155.58	123.41	146.37	129.86	0.053	0.186	0.095	-0.228	0.009	-0.157	0.969080	1.000000	-
Rv1091	PE_PGRS22	26	191.98	195.35	212.74	192.57	191.76	185.61	-0.022	0.002	0.123	-0.018	-0.024	-0.069	0.992272	1.000000	-
Rv1092c	coaA	19	2.92	3.21	1.33	0.97	3.09	1.73	0.135	0.187	-0.188	-0.271	0.166	-0.098	0.900375	1.000000	-
Rv1093	glyA	14	3.40	4.70	6.27	0.70	3.55	4.05	-0.063	0.143	0.360	-0.622	-0.038	0.043	0.094195	1.000000	-
Rv1094	desA2	12	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv1095	phoH2	13	135.58	104.18	124.67	115.05	102.32	116.86	0.211	-0.154	0.095	-0.017	-0.178	0.005	0.942184	1.000000	-
Rv1096	-	19	68.47	63.15	66.61	58.93	62.97	59.74	0.105	-0.003	0.068	-0.096	-0.007	-0.078	0.993042	1.000000	-
Rv1097c	-	18	8.16	7.61	8.32	7.54	8.97	12.18	-0.068	-0.130	-0.051	-0.138	0.018	0.317	0.901686	1.000000	-
Rv1098c	fumC	13	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv1099c	glpX	13	140.13	143.16	144.11	143.28	151.95	136.65	-0.030	-0.001	0.009	0.001	0.083	-0.065	0.998350	1.000000	-
Rv1100	-	9	35.69	54.37	45.31	48.20	27.77	51.10	-0.260	0.285	0.046	0.126	-0.573	0.203	0.612176	1.000000	-
Rv1101c	-	18	206.74	233.94	193.23	221.49	216.45	234.39	-0.073	0.101	-0.168	0.024	-0.008	0.104	0.945997	1.000000	-
Rv1102c	-	8	95.07	86.46	86.11	86.15	102.34	93.98	0.050	-0.080	-0.086	-0.085	0.151	0.034	0.999159	1.000000	-
Rv1103c	-	8	263.85	251.02	252.24	255.37	225.93	249.43	0.078	0.008	0.015	0.032	-0.141	-0.001	0.999510	1.000000	-
Rv1104	-	11	169.48	163.29	173.08	172.72	162.35	158.09	0.025	-0.027	0.054	0.051	-0.035	-0.073	0.999192	1.000000	-
Rv1105	-	11	54.32	49.57	37.60	58.06	58.58	49.93	0.074	-0.046	-0.403	0.162	0.174	-0.037	0.787636	1.000000	-
Rv1106c	-	18	207.35	227.61	231.17	227.60	227.48	245.35	-0.132	-0.001	0.021	-0.001	-0.002	0.105	0.950438	1.000000	-
Rv1107c	xseB	2	43.22	53.72	56.22	41.35	28.45	77.63	-0.192	0.092	0.152	-0.249	-0.720	0.585	0.195170	1.000000	-
Rv1108c	xseA	10	153.94	183.85	161.13	178.44	168.12	120.47	-0.063	0.186	0.001	0.144	0.061	-0.404	0.651232	1.000000	-
Rv1109c	-	9	175.81	161.56	203.07	167.58	139.69	162.16	0.061	-0.057	0.264	-0.006	-0.260	-0.052	0.952426	1.000000	-
Rv1110	ispH	14	2.02	1.08	2.01	0.31	0.52	0.72	0.201	-0.007	0.198	-0.203	-0.147	-0.095	0.437765	1.000000	-
Rv1111c	-	24	87.96	77.94	86.93	96.86	89.51	76.83	0.031	-0.134	0.015	0.163	0.055	-0.153	0.967571	1.000000	-
Rv1112	-	10	149.45	169.78	184.66	142.34	129.23	159.05	-0.058	0.121	0.239	-0.126	-0.260	0.029	0.988431	1.000000	-
Rv1113	-	2	100.19	129.62	170.62	140.24	188.58	146.91	-0.522	-0.166	0.218	-0.056	0.358	0.008	0.915329	1.000000	-
Rv1114	-	3	129.06	196.68	156.58	158.96	197.95	170.21	-0.370	0.219	-0.101	-0.079	0.228	0.016	0.506041	1.000000	-
Rv1115	-	18	134.12	130.95	111.09	149.26	129.68	108.24	0.073	0.040	-0.188	0.222	0.027	-0.224	0.977287	1.000000	-
Rv1116	-	3	51.05	27.20	34.42	62.19	61.35	64.64	0.024	-0.776	-0.484	0.285	0.267	0.337	0.512049	1.000000	-
Rv1116A	-	6	274.20	222.71	276.77	248.23	200.84	227.50	0.179	-0.116	0.192	0.038	-0.261	-0.086	0.997557	1.000000	-
Rv1117	-	3	129.37	147.22	99.23	139.09	107.97	155.51	-0.004	0.176	-0.370	0.097	-0.254	0.253	0.973144	1.000000	-
Rv1118c	-	12	317.66	300.25	309.84	307.28	254.76	245.16	0.133	0.053	0.098	0.086	-0.179	-0.234	0.795866	1.000000	-
Rv1119c	-	3	29.36	23.72	12.62	30.96	28.88	49.95	0.005	-0.254	-0.959	0.070	-0.015	0.682	0.601062	1.000000	-
Rv1120c	-	4	136.29	67.20	123.90	88.12	103.78	118.62	0.344	-0.625	0.212	-0.258	-0.033	0.151	0.857555	1.000000	-
Rv1121	zwf1	24	59.24	56.91	57.09	59.51	58.80	66.58	-0.010	-0.063	-0.059	-0.004	-0.020	0.146	0.973017	1.000000	-
Rv1122	gnd2	14	5.72	4.34	17.24	0.93	10.51	0.00	-0.096	-0.295	0.957	-0.951	0.437	-1.196	0.075556	0.873819	-
Rv1123c	bpoB	9	221.40	240.72	221.79	237.69	208.41	201.11	-0.003	0.115	-0.000	0.097	-0.088	-0.138	0.992178	1.000000	-
Rv1124	ephC	12	110.97	73.17	88.85	90.61	89.52	70.57	0.330	-0.239	0.024	0.051	0.035	-0.288	0.935317	1.000000	-
Rv1125	-	23	52.32	52.86	63.61	58.07	49.77	37.40	-0.001	0.013	0.259	0.137	-0.066	-0.435	0.405621	1.000000	-
Rv1126c	-	10	0.00	0.52	7.23	12.69	18.77	0.00	-1.206	-1.063	0.084	0.617	1.043	-1.206	0.000010	0.000367	-
Rv1127c	ppdK	19	2.08	4.54	9.90	62.26	59.44	3.16	-2.013	-1.581	-0.939	1.236	1.174	-1.807	0.000000	0.000000	-
Rv1128c	-	29	62.05	48.17	71.73	64.64	44.99	42.56	0.144	-0.191	0.338	0.199	-0.280	-0.352	0.087942	0.972790	-
Rv1129c	-	27	60.29	35.27	66.36	63.86	67.19	39.53	0.112	-0.585	0.240	0.189	0.257	-0.440	0.014803	0.245087	-
Rv1130	-	27	115.72	79.57	128.26	126.58	107.18	72.59	0.134	-0.379	0.277	0.259	0.029	-0.503	0.008505	0.160836	-
Rv1131	gltA1	16	54.42	36.25	64.35	53.84	63.42	41.63	0.052	-0.475	0.275	0.038	0.255	-0.298	0.138401	1.000000	-
Rv1132	-	26	63.75	62.62	68.25	57.79	58.66	79.28	-0.027	-0.051	0.064	-0.158	-0.138	0.267	0.756336	1.000000	-
Rv1133c	metE	35	0.00	0.14	0.00	0.00	0.00	0.00	-0.007	0.034	-0.007	-0.007	-0.007	-0.007	0.306817	1.000000	-
Rv1134	-	5	98.67	111.05	88.91	115.35	119.68	82.43	-0.055	0.108	-0.197	0.160	0.211	-0.301	0.925290	1.000000	-
Rv1135c	PPE16	25	111.42	90.48	114.37	86.11	103.05	105.45	0.124	-0.162	0.160	-0.229	0.017	0.048	0.848042	1.000000	-
Rv1135A	-	6	123.22	157.66	167.44	188.90	155.29	172.68	-0.371	-0.028	0.056	0.225	-0.049	0.099	0.774142	1.000000	-
Rv1136	-	3	142.09	159.15	157.31	166.78	138.05	145.14	-0.089	0.070	0.053	0.135	-0.129	-0.059	0.889267	1.000000	-
Rv1137c	-	2	281.28	219.72	307.36	309.88	211.08	216.43	0.124	-0.225	0.250	0.262	-0.281	-0.246	0.377687	1.000000	-
Rv1138c	-	17	172.22	165.02	182.73	177.17	135.32	181.52	0.027	-0.033	0.110	0.066	-0.310	0.100	0.816649	1.000000	-
Rv1139c	-	13	124.26	138.36	160.30	119.80	113.50	137.91	-0.088	0.062	0.267	-0.138	-0.213	0.057	0.846892	1.000000	-
Rv1140	-	11	124.63	104.93	119.16	137.89	126.60	101.00	0.064	-0.174	0.001	0.204	0.085	-0.227	0.933054	1.000000	-
Rv1141c	echA11	14	254.29	236.71	202.42	210.44	204.77	199.56	0.217	0.116	-0.105	-0.050	-0.088	-0.125	0.913720	1.000000	-
Rv1142c	echA10	8	148.34	137.10	141.86	143.25	146.46	141.66	0.050	-0.060	-0.012	0.001	0.032	-0.014	0.999526	1.000000	-
Rv1143	mcr	15	163.29	161.07	178.37	169.97	165.40	161.85	-0.029	-0.048	0.095	0.028	-0.011	-0.041	0.997570	1.000000	-
Rv1144	-	11	252.23	207.70	235.92	214.38	227.72	219.82	0.153	-0.121	0.059	-0.076	0.009	-0.041	0.929381	1.000000	-
Rv1145	mmpL13a	11	119.15	148.05	144.82	129.75	121.96	132.87	-0.150	0.152	0.121	-0.032	-0.118	0.001	0.905620	1.000000	-
Rv1146	mmpL13b	23	212.92	211.74	212.13	201.58	216.39	219.33	0.004	-0.004	-0.001	-0.073	0.027	0.046	0.997061	1.000000	-
Rv1147	-	9	132.28	78.16	122.60	114.54	117.05	104.12	0.237	-0.486	0.132	0.038	0.068	-0.094	0.738823	1.000000	-
Rv1148c	-	23	113.12	111.61	121.28	128.81	118.66	118.47	-0.066	-0.085	0.030	0.114	-0.000	-0.002	0.971016	1.000000	-
Rv1149	-	6	127.39	128.13	138.90	118.92	117.78	143.50	-0.019	-0.010	0.102	-0.114	-0.127	0.147	0.992699	1.000000	-
Rv1151c	-	9	419.52	352.71	373.64	360.70	360.24	313.74	0.204	-0.043	0.039	-0.011	-0.013	-0.209	0.798602	1.000000	-
Rv1152	-	5	95.84	79.93	87.39	110.25	92.14	115.47	-0.014	-0.262	-0.140	0.179	-0.068	0.242	0.844947	1.000000	-
Rv1153c	omt	19	185.64	161.76	176.90	185.13	183.01	204.91	0.021	-0.172	-0.047	0.017	0.001	0.160	0.960901	1.000000	-
Rv1154c	-	16	116.87	122.38	134.34	131.95	125.50	138.87	-0.130	-0.066	0.064	0.039	-0.031	0.110	0.942661	1.000000	-
Rv1155	-	11	171.27	142.03	159.87	151.01	140.71	155.99	0.153	-0.108	0.057	-0.023	-0.121	0.023	0.989679	1.000000	-
Rv1156	-	12	96.40	86.45	75.56	82.49	98.83	97.92	0.100	-0.049	-0.232	-0.113	0.134	0.121	0.753735	1.000000	-
Rv1157c	-	8	118.09	214.05	132.74	265.48	249.21	128.44	-0.624	0.208	-0.462	0.512	0.423	-0.507	0.309323	1.000000	-
Rv1158c	-	11	41.73	118.52	88.67	102.34	152.72	115.15	-1.211	0.191	-0.208	-0.011	0.544	0.151	0.155957	1.000000	-
Rv1159	pimE	28	159.59	179.78	114.81	172.44	218.35	196.45	-0.118	0.049	-0.576	-0.009	0.323	0.174	0.017549	0.281202	-
Rv1159A	phhB	13	75.50	105.05	78.17	108.53	93.77	94.85	-0.279	0.173	-0.231	0.217	0.017	0.032	0.798720	1.000000	-
Rv1160	mutT2	4	349.28	234.45	279.83	293.31	303.42	262.11	0.279	-0.287	-0.036	0.031	0.079	-0.129	0.457616	1.000000	-
Rv1161	narG	75	107.45	113.04	107.04	101.67	106.75	106.58	0.005	0.075	-0.001	-0.071	-0.004	-0.007	0.982442	1.000000	-
Rv1162	narH	35	195.19	189.58	190.06	187.56	185.69	206.79	0.020	-0.021	-0.018	-0.036	-0.050	0.101	0.982878	1.000000	-
Rv1163	narJ	15	242.63	257.70	256.01	238.25	224.05	209.30	0.027	0.113	0.103	0.002	-0.085	-0.181	0.946023	1.000000	-
Rv1164	narI	18	324.56	248.89	251.80	273.47	240.62	238.52	0.298	-0.078	-0.061	0.055	-0.126	-0.138	0.636486	1.000000	-
Rv1165	typA	15	115.96	130.62	126.66	128.98	147.20	143.73	-0.182	-0.017	-0.059	-0.034	0.150	0.116	0.886134	1.000000	-
Rv1166	lpqW	23	0.33	0.00	0.00	0.21	0.32	0.00	0.051	-0.040	-0.040	0.019	0.048	-0.040	0.801157	1.000000	-
Rv1167c	-	9	125.39	155.62	115.20	130.44	114.12	112.10	-0.001	0.300	-0.118	0.054	-0.131	-0.156	0.970060	1.000000	-
Rv1168c	PPE17	16	134.23	141.70	152.54	161.08	157.16	161.69	-0.168	-0.092	0.010	0.087	0.052	0.092	0.967687	1.000000	-
Rv1169c	PE11	3	131.89	151.15	121.76	127.82	122.43	148.82	-0.022	0.168	-0.133	-0.065	-0.125	0.146	0.996610	1.000000	-
Rv1170	mshB	11	138.05	148.87	178.99	84.71	95.64	131.42	0.088	0.193	0.451	-0.586	-0.420	0.019	0.199597	1.000000	-
Rv1171	-	6	302.94	240.31	280.30	303.20	287.07	294.54	0.088	-0.240	-0.022	0.089	0.012	0.048	0.989268	1.000000	-
Rv1172c	PE12	15	114.84	123.84	136.87	130.68	131.30	123.57	-0.138	-0.033	0.106	0.041	0.048	-0.036	0.997899	1.000000	-
Rv1173	fbiC	43	99.49	95.31	124.83	81.73	89.26	78.65	0.065	0.006	0.378	-0.204	-0.084	-0.256	0.014537	0.243714	-
Rv1174c	TB8.4	8	317.99	319.46	304.13	326.75	331.40	282.29	0.019	0.026	-0.044	0.058	0.078	-0.150	0.992427	1.000000	-
Rv1175c	fadH	28	171.93	166.40	176.79	163.94	176.08	155.80	0.028	-0.017	0.067	-0.038	0.062	-0.110	0.981074	1.000000	-
Rv1176c	-	15	186.89	188.95	206.24	208.32	189.27	174.44	-0.040	-0.025	0.098	0.112	-0.023	-0.137	0.977153	1.000000	-
Rv1177	fdxC	7	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv1178	-	20	246.21	200.66	213.24	195.50	171.76	199.77	0.262	-0.027	0.059	-0.064	-0.245	-0.033	0.737583	1.000000	-
Rv1179c	-	41	208.98	217.70	195.40	204.59	191.03	176.89	0.068	0.126	-0.026	0.038	-0.058	-0.166	0.853463	1.000000	-
Rv1180	pks3	25	71.44	53.12	57.17	56.93	55.73	66.47	0.231	-0.165	-0.068	-0.073	-0.101	0.134	0.792955	1.000000	-
Rv1181	pks4	70	83.03	72.65	90.39	76.16	76.21	70.78	0.081	-0.100	0.197	-0.036	-0.035	-0.135	0.366086	1.000000	-
Rv1182	papA3	40	58.79	57.14	68.43	59.51	54.12	48.36	0.024	-0.013	0.227	0.040	-0.085	-0.233	0.487121	1.000000	-
Rv1183	mmpL10	52	41.99	38.71	49.08	36.25	42.66	41.45	0.009	-0.095	0.212	-0.179	0.030	-0.007	0.531337	1.000000	-
Rv1184c	-	22	52.96	45.36	64.23	46.32	43.13	45.66	0.086	-0.117	0.342	-0.090	-0.182	-0.108	0.380576	1.000000	-
Rv1185c	fadD21	32	55.74	54.50	56.22	48.95	52.22	58.77	0.032	0.002	0.044	-0.139	-0.054	0.102	0.976080	1.000000	-
Rv1186c	-	18	70.89	67.25	80.79	72.97	72.78	71.58	-0.034	-0.105	0.143	0.005	0.001	-0.021	0.994725	1.000000	-
Rv1187	rocA	24	61.46	77.27	94.95	76.72	62.67	79.37	-0.275	0.033	0.314	0.023	-0.249	0.069	0.621914	1.000000	-
Rv1188	-	22	54.50	54.30	54.19	59.23	63.16	64.29	-0.089	-0.094	-0.096	0.022	0.107	0.131	0.968001	1.000000	-
Rv1189	sigI	8	87.99	69.94	60.22	70.55	62.74	65.71	0.319	0.008	-0.192	0.020	-0.138	-0.076	0.807089	1.000000	-
Rv1190	-	9	102.80	112.56	111.57	88.92	109.98	108.19	-0.038	0.087	0.075	-0.237	0.055	0.032	0.996386	1.000000	-
Rv1191	-	9	171.12	129.38	137.63	157.34	160.86	132.90	0.201	-0.189	-0.103	0.084	0.115	-0.152	0.872465	1.000000	-
Rv1192	-	14	81.10	80.60	81.80	72.05	76.57	90.86	0.010	0.002	0.022	-0.150	-0.068	0.165	0.971161	1.000000	-
Rv1193	fadD36	21	49.50	39.73	46.86	39.22	33.31	33.50	0.265	-0.020	0.193	-0.037	-0.243	-0.236	0.471633	1.000000	-
Rv1194c	-	18	55.72	59.53	58.21	24.19	18.87	50.61	0.294	0.382	0.352	-0.762	-1.053	0.167	0.000082	0.002476	-
Rv1195	PE13	5	220.98	170.97	209.17	126.30	103.90	132.17	0.449	0.088	0.371	-0.335	-0.605	-0.272	0.767608	1.000000	-
Rv1196	PPE18	10	59.42	42.20	57.29	33.27	17.51	53.95	0.397	-0.052	0.348	-0.355	-1.120	0.268	0.506976	1.000000	-
Rv1197	esxK	3	150.32	168.08	170.29	108.15	129.95	142.56	0.051	0.208	0.226	-0.406	-0.151	-0.023	0.860055	1.000000	-
Rv1198	esxL	4	239.14	203.77	174.50	214.34	215.52	244.55	0.148	-0.078	-0.296	-0.006	0.001	0.180	0.743141	1.000000	-
Rv1199c	-	16	241.20	247.65	260.21	264.39	219.72	247.08	-0.032	0.005	0.075	0.098	-0.164	0.002	0.964959	1.000000	-
Rv1200	-	29	183.71	190.48	168.18	198.81	194.45	181.83	-0.019	0.032	-0.143	0.092	0.061	-0.034	0.911855	1.000000	-
Rv1201c	-	11	0.00	0.00	0.57	0.00	0.66	0.00	-0.058	-0.058	0.098	-0.058	0.121	-0.058	0.414691	1.000000	-
Rv1202	dapE	16	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv1203c	-	8	130.91	120.55	122.92	115.79	102.64	162.71	0.054	-0.060	-0.033	-0.116	-0.282	0.357	0.847847	1.000000	-
Rv1204c	-	16	370.24	331.58	349.58	317.66	356.45	308.58	0.125	-0.032	0.044	-0.092	0.071	-0.134	0.820664	1.000000	-
Rv1205	-	13	154.91	125.91	154.75	163.98	148.86	164.64	0.025	-0.264	0.023	0.104	-0.031	0.110	0.938583	1.000000	-
Rv1206	fadD6	37	178.56	166.43	146.24	132.34	164.22	173.02	0.153	0.054	-0.127	-0.266	0.035	0.108	0.524178	1.000000	-
Rv1207	folP2	10	116.34	142.84	127.02	154.50	156.23	143.78	-0.258	0.027	-0.136	0.136	0.152	0.036	0.949647	1.000000	-
Rv1208	-	14	23.99	21.01	24.62	28.39	49.24	9.39	-0.101	-0.258	-0.070	0.102	0.802	-1.112	0.000071	0.002182	-
Rv1209	-	5	213.72	189.04	203.45	199.30	213.26	242.62	0.023	-0.150	-0.046	-0.075	0.020	0.202	0.974202	1.000000	-
Rv1210	tagA	11	203.72	238.00	210.47	187.74	177.66	234.48	-0.034	0.186	0.012	-0.149	-0.226	0.164	0.800066	1.000000	-
Rv1211	-	4	45.46	95.12	82.01	43.49	35.16	51.30	-0.337	0.651	0.449	-0.395	-0.667	-0.179	0.544588	1.000000	-
Rv1212c	-	32	145.23	138.24	164.51	120.65	111.60	117.27	0.123	0.055	0.298	-0.134	-0.242	-0.174	0.253147	1.000000	-
Rv1213	glgC	30	133.74	131.43	110.59	149.42	147.81	137.92	-0.015	-0.039	-0.278	0.140	0.125	0.028	0.744509	1.000000	-
Rv1214c	PE14	5	306.29	205.10	211.26	266.69	213.23	225.04	0.358	-0.210	-0.168	0.161	-0.155	-0.079	0.500746	1.000000	-
Rv1215c	-	26	158.05	159.21	147.84	147.86	154.83	171.82	0.013	0.023	-0.080	-0.080	-0.016	0.130	0.988385	1.000000	-
Rv1216c	-	19	94.63	98.84	79.41	85.60	88.62	119.68	0.002	0.062	-0.237	-0.135	-0.087	0.326	0.678312	1.000000	-
Rv1217c	-	20	97.58	87.11	87.34	101.02	107.90	95.15	0.022	-0.133	-0.130	0.070	0.160	-0.012	0.891787	1.000000	-
Rv1218c	-	6	94.49	77.32	119.18	109.98	137.26	118.95	-0.203	-0.476	0.117	0.006	0.313	0.114	0.478691	1.000000	-
Rv1219c	-	10	154.05	154.27	199.74	131.65	159.00	136.40	-0.016	-0.014	0.348	-0.235	0.028	-0.186	0.687708	1.000000	-
Rv1220c	-	10	219.97	259.68	244.92	214.01	256.03	227.24	-0.105	0.129	0.047	-0.144	0.109	-0.059	0.960308	1.000000	-
Rv1221	sigE	17	19.76	25.67	21.36	15.68	22.02	27.17	-0.122	0.187	-0.032	-0.382	0.004	0.256	0.706403	1.000000	-
Rv1222	-	2	118.10	157.97	151.39	212.96	233.68	152.36	-0.516	-0.112	-0.171	0.308	0.439	-0.162	0.093053	1.000000	-
Rv1223	htrA	22	55.81	50.23	49.31	49.16	47.60	55.97	0.110	-0.029	-0.053	-0.057	-0.099	0.114	0.999810	1.000000	-
Rv1224	tatB	5	2.60	3.04	0.00	0.87	2.35	2.96	0.125	0.206	-0.479	-0.249	0.077	0.192	0.657853	1.000000	-
Rv1225c	-	6	173.10	182.62	177.69	160.65	220.17	135.65	-0.015	0.060	0.022	-0.120	0.323	-0.356	0.669152	1.000000	-
Rv1226c	-	15	297.61	280.02	290.22	271.79	258.54	222.18	0.138	0.051	0.102	0.009	-0.062	-0.276	0.967647	1.000000	-
Rv1227c	-	6	165.34	224.55	179.49	162.55	164.35	182.11	-0.117	0.313	-0.002	-0.141	-0.125	0.018	0.881055	1.000000	-
Rv1228	lpqX	9	151.78	186.35	183.19	188.61	190.34	221.91	-0.293	-0.005	-0.029	0.012	0.025	0.241	0.803190	1.000000	-
Rv1229c	mrp	16	32.31	47.55	38.57	32.24	21.88	33.45	-0.076	0.418	0.148	-0.079	-0.549	-0.033	0.956061	1.000000	-
Rv1230c	-	20	182.84	198.82	220.61	198.17	197.31	193.89	-0.116	0.002	0.148	-0.003	-0.009	-0.034	0.959871	1.000000	-
Rv1231c	-	7	155.12	125.83	166.56	165.77	164.32	138.45	0.022	-0.269	0.122	0.115	0.103	-0.136	0.945853	1.000000	-
Rv1232c	-	11	146.97	128.49	129.50	138.39	141.15	135.86	0.101	-0.086	-0.076	0.017	0.044	-0.009	0.990051	1.000000	-
Rv1233c	-	19	144.82	139.97	134.86	133.85	129.67	161.63	0.039	-0.008	-0.060	-0.071	-0.115	0.193	0.930737	1.000000	-
Rv1234	-	9	32.96	54.13	37.86	50.83	51.12	62.40	-0.487	0.152	-0.312	0.069	0.077	0.341	0.233262	1.000000	-
Rv1235	lpqY	30	70.45	55.67	59.03	64.26	65.08	77.69	0.101	-0.214	-0.136	-0.023	-0.006	0.233	0.692930	1.000000	-
Rv1236	sugA	19	126.09	119.92	132.20	136.23	129.06	137.16	-0.044	-0.113	0.022	0.064	-0.011	0.073	0.992624	1.000000	-
Rv1237	sugB	12	46.75	58.36	41.19	58.38	47.68	55.34	-0.121	0.171	-0.285	0.171	-0.096	0.100	0.858799	1.000000	-
Rv1238	sugC	25	51.94	52.82	53.88	51.52	62.19	54.93	-0.065	-0.042	-0.016	-0.075	0.174	0.009	0.961037	1.000000	-
Rv1239c	corA	25	127.22	122.68	99.90	91.96	92.36	117.56	0.219	0.168	-0.115	-0.229	-0.223	0.109	0.549387	1.000000	-
Rv1240	mdh	5	1.87	1.04	5.04	0.00	0.00	0.00	0.119	-0.066	0.667	-0.339	-0.339	-0.339	0.056853	0.702298	-
Rv1241	-	1	147.34	376.00	283.84	102.87	187.60	186.36	-0.524	0.799	0.399	-1.022	-0.185	-0.195	1.000000	1.000000	TA sites <= 1
Rv1242	-	9	277.81	295.67	342.03	235.35	299.14	267.07	-0.042	0.046	0.253	-0.277	0.063	-0.098	0.487261	1.000000	-
Rv1243c	PE_PGRS23	19	229.73	217.03	208.79	240.86	211.33	196.97	0.078	-0.003	-0.057	0.144	-0.040	-0.139	0.908721	1.000000	-
Rv1244	lpqZ	8	102.74	134.00	84.93	116.91	100.91	74.01	0.007	0.374	-0.254	0.185	-0.018	-0.441	0.251467	1.000000	-
Rv1245c	-	14	100.22	92.94	102.99	94.92	104.27	89.49	0.038	-0.065	0.076	-0.036	0.093	-0.117	0.992887	1.000000	-
Rv1246c	-	7	143.14	137.98	131.33	159.71	144.41	159.02	-0.027	-0.078	-0.147	0.126	-0.015	0.120	0.991673	1.000000	-
Rv1247c	-	6	56.50	97.01	62.02	54.78	90.38	70.36	-0.321	0.409	-0.197	-0.362	0.312	-0.028	0.261518	1.000000	-
Rv1248c	kgd	46	8.98	7.61	7.50	1.43	1.77	7.52	0.372	0.224	0.211	-0.749	-0.674	0.213	0.000000	0.000000	-
Rv1249c	-	12	286.22	220.81	250.59	255.76	210.55	203.16	0.262	-0.105	0.074	0.103	-0.172	-0.222	0.530666	1.000000	-
Rv1250	-	31	91.76	103.58	77.63	91.00	96.47	115.41	-0.062	0.105	-0.289	-0.073	0.007	0.254	0.234651	1.000000	-
Rv1251c	-	61	109.77	113.49	102.87	116.43	106.58	93.33	0.034	0.080	-0.055	0.116	-0.006	-0.189	0.507806	1.000000	-
Rv1252c	lprE	7	215.59	213.45	186.69	201.75	193.01	221.07	0.069	0.055	-0.133	-0.024	-0.087	0.105	0.987394	1.000000	-
Rv1253	deaD	35	124.20	127.56	128.60	142.31	127.11	110.74	-0.028	0.009	0.020	0.161	0.004	-0.187	0.791277	1.000000	-
Rv1254	-	26	3.75	7.25	1.92	2.52	7.12	5.42	-0.144	0.343	-0.482	-0.361	0.327	0.109	0.007701	0.147024	-
Rv1255c	-	10	85.73	95.24	118.86	91.47	92.57	69.36	-0.100	0.044	0.350	-0.011	0.005	-0.386	0.731798	1.000000	-
Rv1256c	cyp130	16	236.34	241.42	274.89	241.00	255.86	233.96	-0.064	-0.034	0.150	-0.036	0.048	-0.078	0.977868	1.000000	-
Rv1257c	-	16	125.42	111.66	115.19	134.10	93.94	120.08	0.099	-0.061	-0.018	0.192	-0.299	0.039	0.953274	1.000000	-
Rv1258c	-	22	204.49	200.84	202.50	220.56	201.97	214.27	-0.020	-0.046	-0.034	0.086	-0.038	0.046	0.996357	1.000000	-
Rv1259	-	14	78.48	71.83	56.20	71.65	68.83	71.38	0.160	0.040	-0.288	0.037	-0.017	0.032	0.904955	1.000000	-
Rv1260	-	28	69.80	53.69	57.11	49.95	56.95	51.76	0.281	-0.069	0.013	-0.163	0.010	-0.117	0.349901	1.000000	-
Rv1261c	-	11	121.44	126.44	137.96	122.63	103.50	121.86	-0.010	0.046	0.167	0.004	-0.231	-0.005	0.891461	1.000000	-
Rv1262c	-	4	67.54	94.75	71.84	76.99	91.06	62.78	-0.186	0.274	-0.102	-0.009	0.220	-0.283	0.953031	1.000000	-
Rv1263	amiB2	22	119.87	96.49	96.66	98.13	108.08	80.23	0.251	-0.048	-0.045	-0.025	0.108	-0.300	0.372290	1.000000	-
Rv1264	-	13	244.18	232.55	202.61	219.53	222.74	259.99	0.083	0.014	-0.180	-0.067	-0.047	0.172	0.957630	1.000000	-
Rv1265	-	11	13.47	12.07	12.77	14.93	14.60	11.40	0.021	-0.093	-0.035	0.130	0.106	-0.151	0.979217	1.000000	-
Rv1266c	pknH	29	133.50	147.97	144.17	144.57	147.63	139.05	-0.094	0.049	0.013	0.017	0.046	-0.037	0.984765	1.000000	-
Rv1267c	embR	20	156.41	178.28	171.32	167.75	166.80	169.14	-0.102	0.081	0.025	-0.004	-0.012	0.007	0.992226	1.000000	-
Rv1268c	-	11	191.00	167.79	174.76	171.93	192.83	164.14	0.106	-0.075	-0.018	-0.041	0.120	-0.106	0.997724	1.000000	-
Rv1269c	-	8	92.67	98.12	88.97	93.52	95.98	96.57	-0.024	0.054	-0.080	-0.011	0.024	0.032	0.999733	1.000000	-
Rv1270c	lprA	11	92.23	74.62	72.01	79.67	74.47	101.28	0.154	-0.134	-0.182	-0.045	-0.137	0.282	0.861035	1.000000	-
Rv1271c	-	7	43.25	35.01	58.08	37.06	38.68	30.49	0.087	-0.183	0.474	-0.111	-0.057	-0.356	0.823930	1.000000	-
Rv1272c	-	30	39.65	47.35	41.10	60.92	56.97	55.21	-0.306	-0.076	-0.260	0.256	0.167	0.125	0.481756	1.000000	-
Rv1273c	-	32	86.84	99.12	77.36	109.83	115.34	70.21	-0.095	0.086	-0.252	0.227	0.295	-0.384	0.121173	1.000000	-
Rv1274	lprB	4	12.78	17.80	14.76	13.18	14.66	6.41	-0.039	0.320	0.114	-0.007	0.106	-0.678	0.670335	1.000000	-
Rv1275	lprC	6	6.96	21.23	9.37	14.87	27.23	9.21	-0.729	0.405	-0.464	0.005	0.702	-0.479	0.010658	0.192380	-
Rv1276c	-	7	66.01	64.85	71.03	50.92	84.52	62.87	-0.014	-0.038	0.085	-0.359	0.320	-0.079	0.811073	1.000000	-
Rv1277	-	20	108.99	126.20	114.35	104.07	108.27	108.02	-0.033	0.170	0.033	-0.097	-0.042	-0.046	0.914800	1.000000	-
Rv1278	-	28	119.27	118.39	125.53	131.33	132.93	124.76	-0.069	-0.079	0.002	0.065	0.081	-0.007	0.988048	1.000000	-
Rv1279	-	30	116.03	102.40	114.52	118.08	118.60	117.77	0.018	-0.155	-0.001	0.042	0.048	0.038	0.977159	1.000000	-
Rv1280c	oppA	26	109.08	119.57	132.49	154.76	147.88	102.99	-0.219	-0.092	0.050	0.267	0.203	-0.298	0.134144	1.000000	-
Rv1281c	oppD	28	47.10	58.14	55.04	59.62	55.49	42.88	-0.156	0.121	0.049	0.155	0.060	-0.278	0.686424	1.000000	-
Rv1282c	oppC	16	56.31	64.30	79.74	82.86	89.24	70.78	-0.363	-0.187	0.104	0.156	0.257	-0.058	0.338754	1.000000	-
Rv1283c	oppB	21	80.61	116.23	93.39	125.20	87.36	71.68	-0.235	0.267	-0.034	0.370	-0.125	-0.394	0.013087	0.224386	-
Rv1284	-	6	13.58	5.93	19.22	21.12	43.62	26.12	-0.518	-1.283	-0.135	-0.026	0.870	0.226	0.293149	1.000000	-
Rv1285	cysD	16	48.04	53.90	43.66	45.22	37.33	43.74	0.076	0.227	-0.048	-0.003	-0.249	-0.046	0.927485	1.000000	-
Rv1286	cysN	34	53.84	41.84	62.70	40.62	39.09	49.25	0.154	-0.175	0.356	-0.213	-0.263	0.037	0.136145	1.000000	-
Rv1287	-	12	114.42	118.01	166.18	156.06	166.41	150.24	-0.331	-0.288	0.188	0.101	0.190	0.047	0.456453	1.000000	-
Rv1288	-	33	119.82	113.37	118.58	119.02	124.46	127.94	-0.008	-0.085	-0.023	-0.017	0.044	0.083	0.987941	1.000000	-
Rv1289	-	10	106.78	81.92	81.83	102.40	118.31	104.81	0.099	-0.264	-0.265	0.042	0.241	0.074	0.813119	1.000000	-
Rv1290c	-	34	203.43	214.86	197.21	209.01	211.90	193.67	-0.011	0.066	-0.055	0.027	0.047	-0.080	0.991978	1.000000	-
Rv1290A	-	7	19.32	26.78	20.16	28.73	30.57	37.26	-0.402	-0.016	-0.353	0.070	0.146	0.395	0.759517	1.000000	-
Rv1291c	-	3	171.32	207.51	221.73	219.01	190.09	187.76	-0.214	0.055	0.148	0.131	-0.068	-0.086	0.912344	1.000000	-
Rv1292	argS	34	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv1293	lysA	27	0.48	1.68	0.57	2.92	2.77	1.52	-0.281	0.004	-0.257	0.250	0.223	-0.030	0.050057	0.632049	-
Rv1294	thrA	24	0.16	0.00	0.00	0.00	0.00	0.00	0.038	-0.008	-0.008	-0.008	-0.008	-0.008	0.601074	1.000000	-
Rv1295	thrC	20	10.67	13.70	12.12	12.11	15.56	6.68	-0.101	0.154	0.027	0.026	0.291	-0.525	0.983935	1.000000	-
Rv1296	thrB	15	0.00	0.00	0.42	0.00	0.00	0.00	-0.020	-0.020	0.096	-0.020	-0.020	-0.020	0.307620	1.000000	-
Rv1297	rho	22	1.19	0.00	0.29	0.86	0.33	1.13	0.137	-0.172	-0.092	0.056	-0.080	0.123	0.570565	1.000000	-
Rv1298	rpmE	6	4.02	3.40	2.10	2.27	4.82	0.90	0.188	0.085	-0.157	-0.124	0.310	-0.424	0.678943	1.000000	-
Rv1299	prfA	14	0.00	0.00	0.45	0.00	0.00	0.00	-0.021	-0.021	0.103	-0.021	-0.021	-0.021	0.307721	1.000000	-
Rv1300	hemK	14	18.52	18.88	10.49	8.74	6.58	19.43	0.325	0.347	-0.277	-0.450	-0.697	0.380	0.000722	0.018339	-
Rv1301	-	10	10.30	10.63	10.66	4.25	5.50	10.51	0.166	0.197	0.199	-0.561	-0.378	0.185	0.275316	1.000000	-
Rv1302	rfe	19	29.96	28.49	20.88	25.13	28.72	25.10	0.156	0.094	-0.278	-0.059	0.104	-0.060	0.991297	1.000000	-
Rv1303	-	4	124.14	88.95	80.57	70.09	79.90	68.68	0.515	0.056	-0.079	-0.268	-0.090	-0.295	0.974984	1.000000	-
Rv1304	atpB	10	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv1305	atpE	7	0.00	0.71	0.00	0.00	0.00	0.00	-0.034	0.159	-0.034	-0.034	-0.034	-0.034	0.309247	1.000000	-
Rv1306	atpF	3	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv1307	atpH	20	0.96	0.25	0.00	2.13	2.75	3.51	-0.147	-0.330	-0.400	0.112	0.232	0.367	0.418928	1.000000	-
Rv1308	atpA	25	2.13	2.05	1.12	1.32	2.64	1.62	0.065	0.049	-0.154	-0.108	0.164	-0.042	0.967318	1.000000	-
Rv1309	atpG	18	0.00	0.28	0.00	0.00	0.40	0.00	-0.032	0.046	-0.032	-0.032	0.079	-0.032	0.408040	1.000000	-
Rv1310	atpD	20	0.00	0.00	0.00	0.24	0.00	0.24	-0.023	-0.023	-0.023	0.045	-0.023	0.044	0.632843	1.000000	-
Rv1311	atpC	1	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	TA sites <= 1
Rv1312	-	10	46.38	62.68	58.03	80.35	117.32	50.55	-0.531	-0.133	-0.236	0.202	0.721	-0.418	0.000168	0.004709	-
Rv1313c	-	16	252.08	246.06	233.66	239.96	217.94	225.41	0.094	0.060	-0.013	0.024	-0.111	-0.064	0.996683	1.000000	-
Rv1314c	-	15	94.06	77.44	84.41	89.14	77.96	85.73	0.142	-0.123	-0.006	0.068	-0.114	0.015	0.946572	1.000000	-
Rv1315	murA	16	0.24	0.00	0.00	0.00	0.00	0.00	0.057	-0.012	-0.012	-0.012	-0.012	-0.012	0.602465	1.000000	-
Rvnr01	rrs	62	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv1316c	ogt	9	105.70	126.62	90.75	121.06	127.89	137.34	-0.155	0.095	-0.364	0.033	0.109	0.208	0.896521	1.000000	-
Rv1317c	alkA	13	184.36	142.98	170.89	163.59	147.38	160.46	0.185	-0.171	0.078	0.017	-0.129	-0.010	0.795306	1.000000	-
Rv1318c	-	19	187.39	194.41	173.75	192.85	188.71	177.42	0.012	0.064	-0.094	0.053	0.022	-0.064	0.995174	1.000000	-
Rv1319c	-	28	153.28	148.77	145.25	154.82	162.79	165.31	-0.016	-0.058	-0.091	-0.002	0.068	0.090	0.962418	1.000000	-
Rv1320c	-	29	146.25	163.44	142.42	152.49	158.16	159.19	-0.069	0.086	-0.106	-0.011	0.040	0.049	0.942554	1.000000	-
Rv1321	-	12	228.48	184.09	207.39	187.07	208.46	189.45	0.182	-0.122	0.045	-0.100	0.053	-0.082	0.969908	1.000000	-
Rv1322	-	5	214.38	256.41	264.82	228.62	223.61	220.25	-0.128	0.125	0.171	-0.037	-0.068	-0.090	0.997357	1.000000	-
Rv1322A	-	6	89.00	73.95	84.40	89.84	83.08	77.44	0.096	-0.156	0.024	0.109	0.002	-0.093	0.992044	1.000000	-
Rv1323	fadA4	14	152.80	144.29	148.59	140.74	125.78	134.27	0.111	0.031	0.072	-0.003	-0.160	-0.069	0.933455	1.000000	-
Rv1324	-	6	13.49	13.57	8.89	17.87	20.61	20.50	-0.171	-0.165	-0.584	0.135	0.298	0.292	0.818702	1.000000	-
Rv1325c	PE_PGRS24	10	99.48	87.82	90.27	113.48	96.62	75.44	0.080	-0.091	-0.053	0.261	0.040	-0.297	0.869884	1.000000	-
Rv1326c	glgB	42	0.00	0.00	0.00	0.00	0.00	0.11	-0.005	-0.005	-0.005	-0.005	-0.005	0.027	0.306717	1.000000	-
Rv1327c	glgE	39	0.00	0.00	0.00	0.00	1.34	0.00	-0.063	-0.063	-0.063	-0.063	0.280	-0.063	0.135385	1.000000	-
Rv1328	glgP	45	109.41	130.08	112.73	136.99	142.78	131.66	-0.209	0.030	-0.168	0.102	0.160	0.047	0.344268	1.000000	-
Rv1329c	dinG	24	97.13	144.09	102.17	113.08	113.37	110.31	-0.213	0.333	-0.143	-0.003	0.000	-0.038	0.575042	1.000000	-
Rv1330c	-	23	315.73	303.37	328.53	285.89	279.95	275.03	0.082	0.025	0.138	-0.059	-0.089	-0.114	0.985672	1.000000	-
Rv1331	clpS	5	48.28	81.53	79.82	90.10	102.15	99.93	-0.734	-0.035	-0.064	0.102	0.274	0.244	0.205649	1.000000	-
Rv1332	-	7	77.34	97.48	72.03	172.16	144.89	106.03	-0.503	-0.187	-0.599	0.603	0.362	-0.071	0.009522	0.176704	-
Rv1333	-	13	117.25	168.63	109.89	139.56	154.49	154.89	-0.254	0.252	-0.344	-0.012	0.130	0.133	0.320527	1.000000	-
Rv1334	-	12	124.78	219.51	178.36	215.58	190.21	171.26	-0.537	0.254	-0.038	0.228	0.052	-0.095	0.399820	1.000000	-
Rv1335	-	5	96.37	137.44	107.47	139.00	133.76	162.83	-0.408	0.083	-0.258	0.099	0.045	0.320	0.668450	1.000000	-
Rv1336	cysM	19	138.07	175.59	155.50	219.05	244.78	177.60	-0.410	-0.074	-0.244	0.237	0.394	-0.058	0.022960	0.349662	-
Rv1337	-	13	155.13	216.53	152.32	285.66	302.22	232.22	-0.516	-0.048	-0.542	0.344	0.424	0.051	0.000063	0.001980	-
Rv1338	murI	16	0.97	0.96	7.42	31.58	92.04	0.34	-2.189	-2.191	-1.132	0.426	1.834	-2.350	0.000000	0.000000	-
Rv1339	-	19	2.71	10.66	4.28	70.69	77.06	5.48	-2.118	-1.096	-1.851	1.177	1.293	-1.676	0.000000	0.000000	-
Rv1340	rph	13	54.29	102.23	59.86	134.63	135.22	67.91	-0.716	0.139	-0.586	0.520	0.526	-0.417	0.000036	0.001181	-
Rv1341	-	5	117.52	187.61	139.81	204.64	160.72	151.35	-0.432	0.221	-0.191	0.343	0.004	-0.080	0.491947	1.000000	-
Rv1342c	-	5	11.21	14.23	3.78	3.68	6.15	20.26	0.123	0.369	-0.762	-0.778	-0.417	0.763	0.010294	0.188722	-
Rv1343c	lprD	12	26.00	43.22	25.23	49.77	47.67	39.91	-0.493	0.144	-0.529	0.328	0.271	0.042	0.279384	1.000000	-
Rv1344	-	10	143.67	229.30	111.89	250.73	235.42	205.69	-0.436	0.220	-0.783	0.347	0.258	0.067	0.064579	0.773787	-
Rv1345	fadD33	23	137.30	154.05	154.07	172.03	185.05	167.98	-0.229	-0.068	-0.068	0.086	0.189	0.053	0.824122	1.000000	-
Rv1346	fadE14	14	89.05	91.22	87.25	103.28	85.68	79.78	-0.005	0.028	-0.033	0.198	-0.058	-0.155	0.884107	1.000000	-
Rv1347c	-	14	13.74	7.27	8.93	8.72	12.31	9.73	0.310	-0.301	-0.118	-0.140	0.196	-0.037	0.701956	1.000000	-
Rv1348	-	38	4.86	11.77	23.36	173.41	148.18	7.91	-2.755	-1.989	-1.231	1.422	1.202	-2.367	0.000000	0.000000	-
Rv1349	-	19	5.03	17.60	36.37	110.64	88.23	8.18	-2.298	-1.126	-0.254	1.229	0.918	-1.905	0.000000	0.000000	-
Rv1350	fabG	15	27.99	28.25	26.04	27.76	28.28	30.55	-0.007	0.004	-0.095	-0.017	0.006	0.101	0.995159	1.000000	-
Rv1351	-	10	145.77	122.78	146.80	112.56	138.95	131.47	0.127	-0.112	0.137	-0.232	0.060	-0.017	0.926084	1.000000	-
Rv1352	-	5	130.02	110.28	116.88	109.14	110.63	174.34	0.052	-0.176	-0.095	-0.190	-0.171	0.462	0.337702	1.000000	-
Rv1353c	-	13	122.86	81.96	103.61	99.61	90.79	89.40	0.311	-0.245	0.076	0.022	-0.105	-0.126	0.485417	1.000000	-
Rv1354c	-	44	66.06	61.87	63.83	67.94	57.23	57.71	0.075	-0.012	0.029	0.113	-0.116	-0.105	0.907874	1.000000	-
Rv1355c	moeY	40	43.31	50.25	47.33	43.92	51.68	44.94	-0.104	0.090	0.012	-0.085	0.127	-0.056	0.904741	1.000000	-
Rv1356c	-	28	75.85	75.44	74.76	86.40	80.96	75.93	-0.042	-0.049	-0.061	0.135	0.047	-0.040	0.983960	1.000000	-
Rv1357c	-	13	93.83	117.01	130.61	95.89	104.34	117.85	-0.218	0.086	0.239	-0.188	-0.072	0.096	0.692173	1.000000	-
Rv1358	-	73	98.22	95.29	95.87	99.77	98.99	97.36	0.009	-0.033	-0.024	0.030	0.020	-0.003	0.998480	1.000000	-
Rv1359	-	17	83.13	90.37	104.67	92.81	98.64	85.72	-0.147	-0.033	0.169	0.004	0.087	-0.105	0.748985	1.000000	-
Rv1360	-	14	245.90	186.04	188.95	204.67	185.21	198.25	0.281	-0.112	-0.090	0.022	-0.119	-0.023	0.656369	1.000000	-
Rv1361c	PPE19	14	53.56	53.70	73.72	62.01	50.32	59.86	-0.125	-0.122	0.302	0.069	-0.207	0.022	0.937890	1.000000	-
Rv1362c	-	14	90.78	107.12	83.32	103.86	105.61	116.22	-0.148	0.079	-0.265	0.036	0.059	0.191	0.704723	1.000000	-
Rv1363c	-	8	101.21	96.34	118.76	94.85	94.61	104.32	-0.006	-0.074	0.214	-0.095	-0.099	0.035	0.964343	1.000000	-
Rv1364c	-	32	113.50	152.10	125.63	165.54	157.33	113.02	-0.270	0.137	-0.129	0.256	0.184	-0.276	0.251942	1.000000	-
Rv1365c	rsfA	5	152.52	176.19	158.48	207.42	132.63	177.04	-0.130	0.072	-0.076	0.301	-0.325	0.079	0.369289	1.000000	-
Rv1366	-	19	60.09	53.37	66.18	52.69	57.05	60.74	0.039	-0.118	0.168	-0.135	-0.030	0.053	0.990024	1.000000	-
Rv1367c	-	16	126.08	111.75	124.59	107.13	116.50	127.84	0.080	-0.087	0.064	-0.145	-0.029	0.100	0.923192	1.000000	-
Rv1368	lprF	7	92.22	90.00	80.86	107.60	91.65	108.55	-0.043	-0.076	-0.222	0.169	-0.051	0.181	0.951605	1.000000	-
Rv1369c	-	23	309.51	314.77	328.18	333.92	301.45	303.36	-0.026	-0.002	0.057	0.082	-0.063	-0.054	0.980435	1.000000	-
Rv1370c	-	4	221.69	231.83	231.10	236.79	252.34	181.54	-0.026	0.037	0.032	0.067	0.157	-0.308	0.948505	1.000000	-
Rv1371	-	30	32.28	35.12	40.13	36.38	27.52	37.58	-0.096	0.010	0.180	0.055	-0.293	0.096	0.545517	1.000000	-
Rv1372	-	18	52.13	67.79	56.16	53.65	47.76	56.37	-0.086	0.263	0.012	-0.048	-0.201	0.017	0.830943	1.000000	-
Rv1373	-	19	139.43	160.19	160.24	147.19	155.79	138.66	-0.104	0.090	0.090	-0.029	0.051	-0.112	0.913337	1.000000	-
Rv1374c	-	14	183.85	192.27	187.40	180.28	202.96	205.05	-0.061	0.002	-0.034	-0.088	0.078	0.093	0.960688	1.000000	-
Rv1375	-	22	167.71	180.59	175.06	179.60	181.20	174.85	-0.072	0.032	-0.012	0.024	0.037	-0.013	0.997204	1.000000	-
Rv1376	-	16	168.56	166.45	156.89	162.47	151.35	164.83	0.058	0.040	-0.043	0.006	-0.093	0.026	0.998209	1.000000	-
Rv1377c	-	13	95.25	105.11	112.04	104.94	117.70	117.17	-0.182	-0.046	0.042	-0.049	0.110	0.104	0.811599	1.000000	-
Rv1378c	-	24	165.70	150.31	159.53	150.33	156.97	161.39	0.072	-0.064	0.019	-0.064	-0.004	0.035	0.994309	1.000000	-
Rv1379	pyrR	7	39.09	37.00	44.24	26.67	38.93	22.02	0.153	0.083	0.312	-0.324	0.148	-0.554	0.961584	1.000000	-
Rv1380	pyrB	13	0.00	0.00	0.00	0.00	0.56	0.36	-0.044	-0.044	-0.044	-0.044	0.109	0.057	0.405481	1.000000	-
Rv1381	pyrC	11	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv1382	-	6	5.32	3.44	3.15	0.00	4.21	1.68	0.373	0.084	0.033	-0.672	0.209	-0.253	0.173994	1.000000	-
Rv1383	carA	12	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv1384	carB	46	0.00	0.11	0.00	0.20	0.16	0.00	-0.022	0.010	-0.022	0.034	0.022	-0.022	0.503677	1.000000	-
Rv1385	pyrF	6	36.71	45.02	31.35	48.97	39.52	28.35	-0.055	0.208	-0.253	0.317	0.039	-0.377	0.992536	1.000000	-
Rv1386	PE15	6	28.06	41.53	50.09	76.91	92.48	49.75	-0.895	-0.402	-0.158	0.414	0.665	-0.167	0.023517	0.356779	-
Rv1387	PPE20	26	88.74	131.79	107.78	232.45	236.85	122.27	-0.756	-0.211	-0.489	0.585	0.611	-0.315	0.000000	0.000000	-
Rv1388	mihF	7	28.58	21.20	20.56	45.98	31.44	26.52	-0.020	-0.378	-0.413	0.582	0.098	-0.111	0.380819	1.000000	-
Rv1389	gmk	6	0.00	0.00	1.05	0.00	0.00	0.00	-0.050	-0.050	0.225	-0.050	-0.050	-0.050	0.309760	1.000000	-
Rv1390	rpoZ	7	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv1391	dfp	20	7.02	5.86	7.02	9.98	3.92	4.40	0.080	-0.066	0.081	0.398	-0.349	-0.275	0.940093	1.000000	-
Rv1392	metK	19	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv1393c	-	27	168.68	163.62	158.50	168.58	174.19	161.32	0.024	-0.019	-0.063	0.023	0.069	-0.038	0.997451	1.000000	-
Rv1394c	cyp132	19	102.78	123.95	94.72	117.15	111.20	115.72	-0.105	0.154	-0.217	0.076	0.003	0.059	0.866888	1.000000	-
Rv1395	-	17	126.02	120.04	113.04	135.52	121.85	131.61	0.015	-0.053	-0.136	0.116	-0.032	0.075	0.975236	1.000000	-
Rv1396c	PE_PGRS25	12	155.78	143.33	180.01	166.20	167.39	147.51	-0.038	-0.154	0.165	0.053	0.063	-0.114	0.960035	1.000000	-
Rv1397c	-	6	98.32	108.78	89.18	117.63	132.72	128.78	-0.186	-0.047	-0.320	0.061	0.228	0.186	0.897018	1.000000	-
Rv1398c	-	4	188.91	218.57	200.99	217.61	224.52	201.22	-0.140	0.066	-0.053	0.059	0.103	-0.051	0.898710	1.000000	-
Rv1399c	lipH	15	122.50	137.90	148.07	156.25	128.45	135.57	-0.167	-0.002	0.097	0.172	-0.101	-0.026	0.864197	1.000000	-
Rv1400c	lipI	18	83.76	62.89	78.98	68.44	72.00	57.72	0.231	-0.156	0.151	-0.042	0.026	-0.270	0.653629	1.000000	-
Rv1401	-	8	28.77	19.67	29.24	19.29	24.48	31.38	0.148	-0.305	0.168	-0.327	-0.048	0.256	0.411033	1.000000	-
Rv1402	priA	27	4.13	6.77	2.68	2.33	4.31	2.53	0.055	0.421	-0.196	-0.262	0.083	-0.224	0.097987	1.000000	-
Rv1403c	-	16	78.72	74.21	52.01	85.32	96.16	77.59	0.024	-0.056	-0.530	0.134	0.297	0.005	0.239570	1.000000	-
Rv1404	-	7	25.32	23.21	26.30	29.95	32.61	43.72	-0.215	-0.319	-0.169	-0.010	0.096	0.470	0.627011	1.000000	-
Rv1405c	-	12	215.35	182.90	178.55	181.52	188.30	167.25	0.209	-0.021	-0.055	-0.032	0.020	-0.146	0.974359	1.000000	-
Rv1406	fmt	9	9.48	11.91	2.80	5.77	9.02	6.66	0.200	0.424	-0.693	-0.228	0.154	-0.112	0.146171	1.000000	-
Rv1407	fmu	21	181.61	207.23	219.69	211.30	223.77	212.55	-0.200	-0.014	0.068	0.013	0.094	0.021	0.891874	1.000000	-
Rv1408	rpe	13	53.96	44.89	35.21	37.88	41.02	35.47	0.346	0.104	-0.207	-0.114	-0.012	-0.197	0.801588	1.000000	-
Rv1409	ribG	13	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv1410c	-	30	40.59	82.74	62.83	72.18	108.26	56.36	-0.728	0.217	-0.154	0.032	0.585	-0.299	0.000008	0.000293	-
Rv1411c	lprG	9	7.70	20.79	12.87	24.39	38.82	16.51	-0.987	0.035	-0.495	0.223	0.799	-0.228	0.000043	0.001387	-
Rv1412	ribC	7	0.55	2.92	3.11	2.01	5.81	1.44	-0.461	0.052	0.086	-0.125	0.501	-0.246	0.499475	1.000000	-
Rv1413	-	6	441.19	393.31	389.45	428.29	387.79	317.96	0.165	0.001	-0.013	0.123	-0.019	-0.301	0.781330	1.000000	-
Rv1414	-	4	178.73	246.62	165.29	175.58	160.11	169.89	-0.031	0.423	-0.140	-0.056	-0.185	-0.102	0.857591	1.000000	-
Rv1415	ribA2	15	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv1416	ribH	4	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv1417	-	8	73.60	61.31	92.10	121.21	98.02	71.65	-0.216	-0.462	0.089	0.467	0.174	-0.252	0.819807	1.000000	-
Rv1418	lprH	14	96.35	98.24	103.64	102.30	94.53	105.09	-0.051	-0.025	0.049	0.031	-0.078	0.068	0.997700	1.000000	-
Rv1419	-	5	75.40	72.37	83.85	70.12	74.18	78.30	-0.005	-0.061	0.139	-0.103	-0.027	0.046	0.997268	1.000000	-
Rv1420	uvrC	29	79.77	83.32	76.63	89.86	91.13	78.85	-0.058	0.001	-0.113	0.104	0.123	-0.074	0.901095	1.000000	-
Rv1421	-	20	86.45	85.49	67.06	95.71	85.40	86.92	0.031	0.016	-0.313	0.170	0.014	0.038	0.740597	1.000000	-
Rv1422	-	11	203.06	217.48	255.91	217.09	226.92	162.69	-0.073	0.024	0.254	0.021	0.084	-0.384	0.805095	1.000000	-
Rv1423	whiA	11	0.00	0.45	0.57	1.28	1.07	0.43	-0.172	-0.047	-0.016	0.156	0.107	-0.054	0.513674	1.000000	-
Rv1424c	-	19	63.15	72.46	54.04	65.92	75.41	63.53	-0.054	0.131	-0.261	0.003	0.185	-0.046	0.650112	1.000000	-
Rv1425	-	18	151.41	164.97	153.09	158.06	159.19	143.07	-0.032	0.088	-0.017	0.028	0.038	-0.112	0.994927	1.000000	-
Rv1426c	lipO	28	97.14	79.35	62.04	73.38	82.30	75.15	0.295	0.019	-0.312	-0.087	0.069	-0.054	0.192777	1.000000	-
Rv1427c	fadD12	19	68.49	80.50	71.35	77.77	61.13	64.20	-0.040	0.178	0.015	0.131	-0.193	-0.127	0.915450	1.000000	-
Rv1428c	-	18	57.27	79.06	72.79	66.02	74.18	69.15	-0.263	0.169	0.058	-0.074	0.083	-0.012	0.932019	1.000000	-
Rv1429	-	22	118.15	118.45	124.56	125.38	115.32	110.93	-0.008	-0.004	0.066	0.075	-0.041	-0.095	0.993373	1.000000	-
Rv1430	PE16	39	75.58	66.32	73.92	77.10	77.56	76.15	0.021	-0.155	-0.009	0.048	0.056	0.031	0.973383	1.000000	-
Rv1431	-	25	41.89	33.50	53.08	24.28	31.47	33.63	0.183	-0.102	0.492	-0.497	-0.180	-0.097	0.043535	0.567656	-
Rv1432	-	16	159.92	59.48	168.19	6.52	13.53	39.81	1.051	-0.303	1.122	-2.788	-2.102	-0.828	0.000000	0.000003	-
Rv1433	-	17	182.76	193.18	191.88	192.70	155.03	177.63	0.004	0.082	0.073	0.079	-0.226	-0.036	0.934955	1.000000	-
Rv1434	-	1	128.27	143.20	118.70	221.97	168.65	114.30	-0.210	-0.057	-0.318	0.558	0.172	-0.370	1.000000	1.000000	TA sites <= 1
Rv1435c	-	16	156.15	137.19	163.00	127.10	139.99	133.51	0.125	-0.056	0.185	-0.162	-0.028	-0.094	0.953548	1.000000	-
Rv1436	gap	14	3.76	1.83	0.90	0.00	0.00	0.00	0.526	0.167	-0.044	-0.282	-0.282	-0.282	0.000310	0.008404	-
Rv1437	pgk	16	3.68	5.08	2.54	1.15	0.45	1.94	0.215	0.432	0.013	-0.282	-0.455	-0.107	0.172734	1.000000	-
Rv1438	tpiA	15	0.00	0.35	0.00	0.00	0.00	0.00	-0.017	0.080	-0.017	-0.017	-0.017	-0.017	0.307620	1.000000	-
Rv1439c	-	7	76.15	95.93	85.29	87.06	72.46	73.72	-0.097	0.218	0.057	0.085	-0.164	-0.140	0.965469	1.000000	-
Rv1440	secG	5	16.98	13.14	13.08	19.88	21.28	8.24	0.105	-0.172	-0.177	0.284	0.363	-0.626	0.960800	1.000000	-
Rv1441c	PE_PGRS26	18	176.55	203.39	172.83	175.06	163.09	151.16	0.023	0.222	-0.007	0.011	-0.088	-0.194	0.919237	1.000000	-
Rv1442	bisC	37	170.26	162.56	180.94	177.96	169.42	169.38	-0.012	-0.077	0.073	0.050	-0.019	-0.019	0.995040	1.000000	-
Rv1443c	-	2	100.85	104.80	59.35	120.25	84.80	99.88	0.082	0.135	-0.636	0.325	-0.155	0.069	0.900046	1.000000	-
Rv1444c	-	3	94.38	49.48	74.93	74.58	40.93	65.10	0.474	-0.394	0.159	0.153	-0.640	-0.030	0.320385	1.000000	-
Rv1445c	devB	9	95.54	91.99	73.73	67.49	68.05	65.91	0.292	0.240	-0.061	-0.180	-0.169	-0.212	0.887211	1.000000	-
Rv1446c	opcA	15	70.81	49.18	90.80	42.83	54.66	71.98	0.149	-0.336	0.487	-0.516	-0.197	0.171	0.045622	0.587826	-
Rv1447c	zwf2	19	77.47	80.59	96.38	79.40	78.77	73.64	-0.061	-0.008	0.237	-0.028	-0.039	-0.130	0.913302	1.000000	-
Rv1448c	tal	13	80.08	94.40	95.94	91.31	72.07	73.23	-0.073	0.151	0.173	0.106	-0.216	-0.194	0.978217	1.000000	-
Rv1449c	tkt	26	0.89	3.32	2.16	1.60	1.53	1.74	-0.223	0.276	0.059	-0.059	-0.074	-0.028	0.840211	1.000000	-
Rv1450c	PE_PGRS27	32	127.58	121.64	135.01	126.47	134.97	116.53	0.006	-0.060	0.085	-0.006	0.084	-0.120	0.993065	1.000000	-
Rv1451	ctaB	16	10.61	5.42	9.35	6.85	8.74	10.40	0.203	-0.381	0.082	-0.195	0.019	0.184	0.940761	1.000000	-
Rv1452c	PE_PGRS28	17	282.16	244.85	241.05	251.45	280.73	219.39	0.153	-0.048	-0.070	-0.010	0.146	-0.203	0.855522	1.000000	-
Rv1453	-	11	271.85	265.44	257.71	252.99	234.63	255.48	0.083	0.049	0.007	-0.019	-0.125	-0.005	0.995905	1.000000	-
Rv1454c	qor	16	262.62	259.34	257.65	250.70	282.79	253.90	0.008	-0.010	-0.019	-0.058	0.113	-0.040	0.993571	1.000000	-
Rv1455	-	12	225.61	216.18	201.43	226.97	220.54	214.22	0.052	-0.009	-0.108	0.060	0.020	-0.021	0.999578	1.000000	-
Rv1456c	-	15	9.95	20.41	12.31	6.84	6.80	9.72	-0.098	0.667	0.113	-0.434	-0.440	-0.121	0.097180	1.000000	-
Rv1457c	-	8	56.52	75.31	65.59	70.90	73.49	61.52	-0.231	0.153	-0.033	0.072	0.120	-0.119	0.907525	1.000000	-
Rv1458c	-	14	198.40	210.72	166.19	217.39	182.28	217.33	-0.002	0.083	-0.251	0.127	-0.121	0.126	0.797395	1.000000	-
Rv1459c	-	26	37.00	41.97	35.27	40.12	39.55	40.59	-0.070	0.092	-0.131	0.033	0.015	0.048	0.999428	1.000000	-
Rv1460	-	9	99.61	50.90	60.86	30.75	36.08	50.04	0.809	-0.095	0.142	-0.740	-0.539	-0.117	0.011920	0.208606	-
Rv1461	-	59	0.00	0.00	0.00	0.00	0.00	0.08	-0.004	-0.004	-0.004	-0.004	-0.004	0.019	0.306573	1.000000	-
Rv1462	-	14	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv1463	-	12	0.00	0.00	0.00	0.00	0.00	0.45	-0.021	-0.021	-0.021	-0.021	-0.021	0.103	0.307973	1.000000	-
Rv1464	csd	15	3.51	0.67	4.63	0.32	0.00	0.72	0.358	-0.229	0.536	-0.320	-0.409	-0.215	0.009339	0.174942	-
Rv1465	-	8	19.85	15.83	18.77	10.49	16.93	13.93	0.245	-0.009	0.181	-0.437	0.064	-0.147	0.947675	1.000000	-
Rv1466	-	1	82.60	116.75	40.75	23.27	55.95	60.80	0.358	0.833	-0.579	-1.274	-0.165	-0.055	1.000000	1.000000	TA sites <= 1
Rv1467c	fadE15	28	147.42	166.98	145.97	135.85	161.96	160.54	-0.053	0.121	-0.067	-0.167	0.078	0.066	0.783226	1.000000	-
Rv1468c	PE_PGRS29	10	127.07	120.77	116.88	137.75	165.51	120.16	-0.046	-0.117	-0.162	0.066	0.322	-0.124	0.805186	1.000000	-
Rv1469	ctpD	20	124.90	139.79	114.45	122.83	127.27	126.18	-0.011	0.145	-0.132	-0.034	0.015	0.003	0.977881	1.000000	-
Rv1470	trxA	5	120.21	144.54	120.79	130.53	111.38	137.80	-0.082	0.174	-0.075	0.032	-0.188	0.108	0.995719	1.000000	-
Rv1471	trxB1	3	212.62	261.30	278.33	233.73	154.27	184.54	-0.053	0.238	0.327	0.080	-0.504	-0.253	0.817856	1.000000	-
Rv1472	echA12	15	139.52	145.47	157.17	164.71	159.13	141.95	-0.113	-0.055	0.053	0.119	0.070	-0.089	0.955683	1.000000	-
Rv1473	-	25	124.34	139.10	118.45	127.88	146.16	129.56	-0.072	0.084	-0.139	-0.033	0.153	-0.014	0.875242	1.000000	-
Rv1473A	-	4	235.33	266.66	215.93	289.34	248.78	318.49	-0.154	0.023	-0.276	0.138	-0.076	0.275	0.811774	1.000000	-
Rv1474c	-	8	208.62	196.47	239.34	132.35	134.29	163.75	0.214	0.130	0.408	-0.423	-0.403	-0.126	0.799297	1.000000	-
Rv1475c	acn	56	2.32	3.03	1.95	1.90	2.48	2.76	-0.017	0.117	-0.093	-0.102	0.014	0.067	0.995976	1.000000	-
Rv1476	-	6	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv1477	-	24	29.77	34.31	35.60	39.34	52.33	27.08	-0.252	-0.075	-0.028	0.099	0.470	-0.368	0.613814	1.000000	-
Rv1478	-	9	190.95	180.28	186.88	161.83	178.50	170.61	0.097	0.016	0.067	-0.135	0.003	-0.061	0.989095	1.000000	-
Rv1479	moxR1	14	0.00	0.00	0.00	0.00	0.84	0.00	-0.040	-0.040	-0.040	-0.040	0.184	-0.040	0.041247	0.543148	-
Rv1480	-	6	26.36	31.27	49.41	42.15	49.17	45.90	-0.543	-0.334	0.251	0.045	0.245	0.155	0.977455	1.000000	-
Rv1481	-	13	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv1482c	-	14	219.62	239.50	211.02	228.39	215.73	197.09	0.007	0.129	-0.049	0.062	-0.018	-0.146	0.991695	1.000000	-
Rv1483	fabG1	13	0.00	0.00	0.00	0.00	0.35	0.00	-0.017	-0.017	-0.017	-0.017	0.080	-0.017	0.307837	1.000000	-
Rv1484	inhA	9	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv1485	hemH	25	0.98	5.50	3.37	68.94	83.29	11.08	-2.502	-1.689	-2.016	1.127	1.383	-1.074	0.000000	0.000000	-
Rv1486c	-	8	218.03	230.30	239.64	228.36	244.06	238.70	-0.095	-0.018	0.039	-0.029	0.064	0.033	0.998230	1.000000	-
Rv1487	-	3	221.80	151.76	115.45	186.29	92.38	128.71	0.555	0.022	-0.358	0.309	-0.665	-0.208	0.235911	1.000000	-
Rv1488	-	15	290.23	270.24	242.22	231.22	227.46	271.11	0.181	0.080	-0.075	-0.141	-0.164	0.084	0.782518	1.000000	-
Rv1489	-	6	284.07	290.04	305.45	299.54	299.45	291.19	-0.053	-0.024	0.050	0.022	0.021	-0.018	0.999924	1.000000	-
Rv1489A	-	4	249.04	241.01	205.89	235.55	255.45	190.23	0.115	0.069	-0.153	0.037	0.151	-0.265	0.953790	1.000000	-
Rv1490	-	38	29.99	32.73	30.80	25.47	37.85	33.25	-0.068	0.041	-0.035	-0.268	0.224	0.060	0.450616	1.000000	-
Rv1491c	-	15	151.87	147.59	134.27	158.20	153.71	157.66	0.012	-0.028	-0.160	0.069	0.029	0.064	0.989994	1.000000	-
Rv1492	mutA	16	154.70	170.74	212.63	184.74	175.78	157.66	-0.181	-0.043	0.266	0.068	-0.002	-0.154	0.664427	1.000000	-
Rv1493	mutB	31	166.80	167.96	164.29	161.51	156.22	158.21	0.037	0.046	0.015	-0.009	-0.055	-0.037	0.999760	1.000000	-
Rv1494	-	8	181.35	143.07	180.37	178.30	168.62	145.57	0.122	-0.210	0.115	0.098	0.020	-0.185	0.963711	1.000000	-
Rv1495	-	6	165.49	111.62	190.48	122.74	127.52	167.82	0.160	-0.388	0.357	-0.257	-0.204	0.179	0.092192	1.000000	-
Rv1496	-	8	143.76	136.35	130.81	165.98	122.39	139.14	0.040	-0.034	-0.092	0.240	-0.184	-0.006	0.848365	1.000000	-
Rv1497	lipL	16	256.85	219.51	209.13	188.60	219.35	217.32	0.229	0.007	-0.062	-0.207	0.006	-0.007	0.923770	1.000000	-
Rv1498c	-	16	81.77	99.11	78.18	82.42	88.22	120.51	-0.156	0.106	-0.217	-0.146	-0.053	0.376	0.106446	1.000000	-
Rv1498A	-	3	218.09	266.75	196.11	301.62	245.42	281.66	-0.202	0.083	-0.352	0.257	-0.035	0.160	0.129605	1.000000	-
Rv1499	-	5	200.72	163.56	190.96	160.78	185.17	183.99	0.146	-0.141	0.076	-0.165	0.033	0.024	0.964332	1.000000	-
Rv1500	-	36	106.56	96.84	107.27	109.50	96.10	104.74	0.040	-0.091	0.049	0.078	-0.102	0.016	0.999412	1.000000	-
Rv1501	-	33	40.97	45.31	31.96	49.84	52.14	55.84	-0.150	-0.020	-0.465	0.104	0.164	0.254	0.300929	1.000000	-
Rv1502	-	33	35.57	46.52	43.40	43.74	40.00	47.01	-0.234	0.111	0.021	0.031	-0.084	0.125	0.670400	1.000000	-
Rv1503c	-	18	181.26	180.11	179.78	170.95	164.96	162.38	0.063	0.055	0.052	-0.019	-0.069	-0.091	0.997707	1.000000	-
Rv1504c	-	12	287.60	249.88	301.49	306.21	291.27	283.56	0.005	-0.195	0.072	0.094	0.023	-0.015	0.977245	1.000000	-
Rv1505c	-	27	39.02	36.79	37.79	44.43	42.42	40.61	-0.037	-0.112	-0.078	0.130	0.070	0.014	0.982863	1.000000	-
Rv1506c	-	20	70.11	74.54	79.82	84.65	86.00	70.93	-0.138	-0.056	0.037	0.117	0.138	-0.123	0.894049	1.000000	-
Rv1507c	-	29	8.93	15.06	13.59	13.54	14.72	13.39	-0.386	0.140	0.030	0.026	0.115	0.015	0.720451	1.000000	-
Rv1507A	-	18	31.22	44.19	45.24	37.36	48.14	54.79	-0.421	0.021	0.051	-0.195	0.132	0.302	0.680632	1.000000	-
Rv1508c	-	43	137.85	141.91	129.61	150.67	145.47	157.66	-0.059	-0.019	-0.145	0.065	0.015	0.128	0.912759	1.000000	-
Rv1508A	-	13	105.44	160.19	130.32	124.19	117.58	102.26	-0.217	0.364	0.077	0.010	-0.066	-0.259	0.418617	1.000000	-
Rv1509	-	20	54.13	44.14	32.34	55.47	56.69	46.22	0.153	-0.114	-0.510	0.186	0.214	-0.054	0.729727	1.000000	-
Rv1510	-	23	318.41	296.05	291.11	304.79	316.32	283.50	0.077	-0.027	-0.051	0.014	0.067	-0.088	0.958436	1.000000	-
Rv1511	gmdA	20	238.12	269.80	227.97	250.92	253.05	234.96	-0.045	0.132	-0.106	0.029	0.041	-0.064	0.967179	1.000000	-
Rv1512	epiA	13	31.92	48.70	31.71	36.21	50.73	21.56	-0.179	0.361	-0.187	-0.021	0.415	-0.654	0.099614	1.000000	-
Rv1513	-	7	47.17	41.44	48.68	35.49	48.99	51.64	0.045	-0.123	0.086	-0.321	0.094	0.164	0.789800	1.000000	-
Rv1514c	-	18	54.01	62.09	65.23	43.18	56.09	60.31	-0.067	0.118	0.184	-0.360	-0.017	0.079	0.475800	1.000000	-
Rv1515c	-	18	43.08	51.12	38.62	51.77	36.05	51.02	-0.064	0.159	-0.205	0.175	-0.292	0.156	0.835471	1.000000	-
Rv1516c	-	11	51.97	54.62	50.99	48.46	42.83	49.62	0.057	0.123	0.032	-0.034	-0.195	-0.003	0.981397	1.000000	-
Rv1517	-	15	57.82	46.97	52.54	65.50	65.75	63.55	-0.020	-0.293	-0.147	0.147	0.152	0.106	0.915701	1.000000	-
Rv1518	-	12	114.66	94.21	100.37	82.36	79.54	96.34	0.265	-0.005	0.082	-0.189	-0.236	0.025	0.516323	1.000000	-
Rv1519	-	3	210.08	151.33	214.28	144.39	168.50	154.01	0.267	-0.193	0.295	-0.259	-0.043	-0.169	0.911859	1.000000	-
Rv1520	-	25	123.01	135.51	125.51	114.68	119.47	128.63	-0.016	0.118	0.012	-0.113	-0.057	0.046	0.974865	1.000000	-
Rv1521	fadD25	38	73.98	86.85	73.21	79.26	81.88	97.10	-0.140	0.078	-0.155	-0.047	-0.003	0.230	0.454623	1.000000	-
Rv1522c	mmpL12	52	132.01	143.67	122.94	144.83	137.42	145.56	-0.059	0.059	-0.158	0.070	-0.003	0.077	0.871592	1.000000	-
Rv1523	-	21	82.58	97.39	73.22	71.77	85.24	108.60	-0.063	0.163	-0.226	-0.253	-0.019	0.313	0.500160	1.000000	-
Rv1524	-	13	97.98	93.70	105.47	130.86	119.87	114.89	-0.165	-0.226	-0.064	0.235	0.113	0.054	0.616063	1.000000	-
Rv1525	wbbL2	22	41.52	33.17	32.32	34.09	43.44	37.22	0.149	-0.137	-0.169	-0.102	0.207	0.009	0.795420	1.000000	-
Rv1526c	-	19	129.74	141.59	149.53	150.79	108.49	115.55	-0.030	0.091	0.167	0.179	-0.278	-0.191	0.811840	1.000000	-
Rv1527c	pks5	100	101.49	97.03	104.84	96.52	96.91	92.73	0.045	-0.017	0.089	-0.024	-0.019	-0.079	0.907866	1.000000	-
Rv1528c	papA4	7	256.53	227.01	242.38	228.98	263.76	203.85	0.111	-0.061	0.031	-0.049	0.151	-0.213	0.883882	1.000000	-
Rv1529	fadD24	37	86.43	70.63	89.13	79.49	77.54	73.72	0.114	-0.160	0.156	-0.000	-0.034	-0.102	0.747550	1.000000	-
Rv1530	adh	25	50.23	60.54	52.96	53.70	56.59	51.28	-0.100	0.146	-0.031	-0.013	0.057	-0.073	0.978696	1.000000	-
Rv1531	-	8	66.62	70.60	120.79	65.82	69.13	74.94	-0.212	-0.134	0.600	-0.229	-0.163	-0.054	0.325029	1.000000	-
Rv1532c	-	5	93.69	100.67	119.40	156.36	103.05	91.70	-0.231	-0.132	0.103	0.479	-0.100	-0.260	0.678386	1.000000	-
Rv1533	-	11	77.83	75.43	69.22	72.55	72.34	85.28	0.042	-0.000	-0.116	-0.053	-0.057	0.166	0.988377	1.000000	-
Rv1534	-	17	106.29	133.28	144.20	129.93	125.35	121.04	-0.243	0.071	0.180	0.035	-0.015	-0.063	0.642793	1.000000	-
Rv1535	-	4	82.27	79.84	71.14	94.32	90.24	106.39	-0.082	-0.123	-0.279	0.105	0.044	0.270	0.283846	1.000000	-
Rv1536	ileS	79	0.00	0.00	0.00	0.06	0.00	0.00	-0.003	-0.003	-0.003	0.015	-0.003	-0.003	0.599159	1.000000	-
Rv1537	dinX	14	113.22	147.29	133.83	122.44	116.33	159.87	-0.214	0.151	0.017	-0.106	-0.177	0.265	0.683033	1.000000	-
Rv1538c	ansA	14	249.80	241.46	253.51	216.91	192.02	237.09	0.106	0.058	0.127	-0.094	-0.265	0.032	0.726606	1.000000	-
Rv1539	lspA	9	39.60	54.21	43.39	38.86	72.05	37.06	-0.236	0.173	-0.118	-0.260	0.553	-0.321	0.509637	1.000000	-
Rv1540	-	14	3.94	15.98	25.64	38.62	28.67	12.34	-1.533	-0.302	0.244	0.754	0.380	-0.577	0.000000	0.000001	-
Rv1541c	lprI	9	176.97	210.37	171.14	169.01	170.95	179.42	-0.021	0.222	-0.068	-0.086	-0.070	-0.002	0.976082	1.000000	-
Rv1542c	glbN	8	168.87	134.08	138.00	135.57	156.30	177.46	0.150	-0.172	-0.132	-0.157	0.042	0.219	0.800863	1.000000	-
Rv1543	-	15	71.03	104.08	71.79	98.87	86.76	99.14	-0.300	0.221	-0.286	0.150	-0.029	0.154	0.856246	1.000000	-
Rv1544	-	11	159.61	159.15	170.33	155.27	148.01	172.82	-0.011	-0.015	0.080	-0.050	-0.116	0.100	0.993806	1.000000	-
Rv1545	-	3	208.35	251.80	259.01	248.17	271.19	290.89	-0.285	-0.017	0.023	-0.038	0.088	0.187	0.978476	1.000000	-
Rv1546	-	5	372.53	435.12	336.74	328.89	395.65	321.06	0.029	0.250	-0.115	-0.148	0.115	-0.182	0.514922	1.000000	-
Rv1547	dnaE	47	0.12	0.11	0.00	0.00	0.00	0.00	0.022	0.021	-0.011	-0.011	-0.011	-0.011	0.634510	1.000000	-
Rv1548c	PPE21	42	47.20	51.83	46.53	47.13	48.59	52.89	-0.050	0.073	-0.068	-0.052	-0.012	0.100	0.998078	1.000000	-
Rv1549	fadD11.1	9	161.88	166.95	213.00	158.06	178.20	189.18	-0.132	-0.089	0.253	-0.166	0.003	0.087	0.836709	1.000000	-
Rv1550	fadD11	28	135.70	130.28	146.79	111.15	114.71	149.41	0.045	-0.011	0.155	-0.231	-0.188	0.180	0.467007	1.000000	-
Rv1551	plsB1	33	120.19	142.30	127.69	130.24	121.45	121.96	-0.080	0.155	0.004	0.032	-0.065	-0.060	0.965872	1.000000	-
Rv1552	frdA	40	60.60	75.98	63.16	67.16	65.36	69.86	-0.135	0.169	-0.080	0.003	-0.034	0.056	0.890695	1.000000	-
Rv1553	frdB	14	109.45	113.72	112.72	123.92	104.52	120.54	-0.058	-0.005	-0.017	0.114	-0.122	0.075	0.989887	1.000000	-
Rv1554	frdC	10	159.80	157.74	146.05	156.56	152.43	142.87	0.065	0.047	-0.061	0.036	-0.001	-0.092	0.997027	1.000000	-
Rv1555	frdD	4	147.01	137.40	85.32	131.20	121.49	143.41	0.197	0.102	-0.554	0.038	-0.068	0.162	0.123729	1.000000	-
Rv1556	-	14	135.71	169.16	142.92	151.66	155.09	149.59	-0.146	0.162	-0.074	0.009	0.040	-0.010	0.906854	1.000000	-
Rv1557	mmpL6	20	121.78	127.50	139.30	119.97	122.81	138.65	-0.073	-0.009	0.114	-0.093	-0.061	0.108	0.937501	1.000000	-
Rv1558	-	9	334.96	326.94	323.94	298.39	286.10	247.81	0.142	0.108	0.095	-0.022	-0.082	-0.285	0.843114	1.000000	-
Rv1559	ilvA	26	158.69	162.18	148.21	156.18	127.58	144.58	0.083	0.113	-0.013	0.060	-0.221	-0.047	0.778534	1.000000	-
Rv1560	-	3	38.26	52.58	59.67	54.24	62.53	55.50	-0.443	-0.030	0.137	0.011	0.200	0.041	0.891171	1.000000	-
Rv1561	-	9	110.17	97.06	76.78	104.10	97.37	88.58	0.194	0.020	-0.300	0.116	0.024	-0.105	0.468209	1.000000	-
Rv1562c	treZ	37	59.40	55.70	61.41	63.44	57.51	58.86	0.000	-0.085	0.045	0.088	-0.043	-0.012	0.985067	1.000000	-
Rv1563c	treY	36	44.28	40.28	58.45	49.43	52.15	43.65	-0.106	-0.228	0.259	0.037	0.108	-0.125	0.415515	1.000000	-
Rv1564c	treX	49	55.07	53.60	50.25	52.46	56.31	52.68	0.041	0.005	-0.080	-0.023	0.070	-0.018	0.993869	1.000000	-
Rv1565c	-	46	57.65	51.44	62.70	34.97	40.97	33.49	0.272	0.122	0.384	-0.376	-0.174	-0.430	0.000006	0.000241	-
Rv1566c	-	10	164.80	280.42	225.98	331.06	340.31	309.21	-0.723	0.026	-0.279	0.262	0.301	0.165	0.001966	0.044830	-
Rv1567c	-	9	79.92	92.32	81.76	95.57	86.93	108.88	-0.175	0.021	-0.144	0.069	-0.061	0.248	0.906404	1.000000	-
Rv1568	bioA	16	175.14	220.84	207.41	202.48	186.10	142.32	-0.107	0.219	0.130	0.097	-0.022	-0.397	0.509495	1.000000	-
Rv1569	bioF1	7	268.71	205.22	278.39	221.62	216.49	221.92	0.187	-0.194	0.237	-0.085	-0.118	-0.083	0.768294	1.000000	-
Rv1570	bioD	2	88.55	87.50	79.72	71.75	94.20	61.68	0.129	0.112	-0.014	-0.157	0.213	-0.360	0.995443	1.000000	-
Rv1571	-	3	62.15	136.73	64.60	89.77	46.95	32.20	-0.199	0.879	-0.147	0.298	-0.569	-1.051	0.154987	1.000000	-
Rv1572c	-	1	3.87	15.15	28.10	14.07	11.75	34.40	-1.368	-0.184	0.532	-0.264	-0.450	0.784	1.000000	1.000000	TA sites <= 1
Rv1573	-	1	176.64	116.95	112.40	37.10	0.00	76.35	0.988	0.413	0.358	-1.121	-4.195	-0.171	1.000000	1.000000	TA sites <= 1
Rv1574	-	3	81.09	77.82	92.71	88.60	105.32	99.79	-0.155	-0.211	0.027	-0.035	0.202	0.128	0.962010	1.000000	-
Rv1575	-	10	35.59	31.06	31.60	49.39	25.55	28.29	0.073	-0.097	-0.076	0.495	-0.337	-0.213	0.602980	1.000000	-
Rv1576c	-	10	14.96	20.94	22.20	24.11	17.61	16.94	-0.293	0.085	0.153	0.251	-0.114	-0.157	0.900816	1.000000	-
Rv1577c	-	8	7.92	29.21	31.26	23.16	36.65	30.80	-1.286	0.119	0.203	-0.162	0.403	0.185	0.076282	0.879672	-
Rv1578c	-	4	81.51	88.11	50.19	75.96	96.34	57.19	0.115	0.221	-0.534	0.019	0.343	-0.361	0.369502	1.000000	-
Rv1579c	-	4	7.13	31.85	28.82	16.33	33.79	30.91	-1.298	0.306	0.183	-0.483	0.380	0.269	0.045777	0.587826	-
Rv1580c	-	5	111.52	158.82	119.39	139.74	157.00	157.41	-0.322	0.170	-0.228	-0.009	0.154	0.157	0.658637	1.000000	-
Rv1581c	-	7	79.74	70.71	50.47	45.43	72.96	59.70	0.314	0.151	-0.297	-0.435	0.194	-0.075	0.416588	1.000000	-
Rv1582c	-	32	34.23	32.26	37.03	33.01	32.62	45.56	-0.056	-0.130	0.043	-0.102	-0.116	0.310	0.669126	1.000000	-
Rv1583c	-	5	109.08	79.22	133.74	106.73	126.29	89.60	0.021	-0.417	0.303	-0.009	0.224	-0.249	0.507399	1.000000	-
Rv1584c	-	3	254.74	345.56	341.59	428.09	364.35	281.79	-0.393	0.040	0.023	0.345	0.115	-0.250	0.798852	1.000000	-
Rv1585c	-	9	64.60	49.83	52.19	60.17	55.55	48.70	0.210	-0.134	-0.073	0.115	0.009	-0.164	0.954425	1.000000	-
Rv1586c	-	24	85.67	86.21	105.87	106.88	85.66	78.50	-0.089	-0.081	0.201	0.214	-0.090	-0.208	0.822924	1.000000	-
Rv1587c	-	15	82.45	98.36	104.76	106.55	84.85	104.20	-0.220	0.021	0.108	0.131	-0.181	0.100	0.921372	1.000000	-
Rv1588c	-	11	185.77	157.96	182.41	166.29	168.35	185.57	0.089	-0.139	0.063	-0.067	-0.049	0.087	0.993849	1.000000	-
Rv1589	bioB	10	215.82	175.91	163.78	208.85	216.15	212.54	0.115	-0.172	-0.272	0.069	0.118	0.094	0.801253	1.000000	-
Rv1590	-	3	330.75	247.85	341.40	363.50	310.37	263.46	0.094	-0.315	0.139	0.228	0.004	-0.229	0.963354	1.000000	-
Rv1591	-	8	299.27	249.41	203.21	210.94	235.28	240.57	0.314	0.056	-0.233	-0.181	-0.027	0.005	0.704310	1.000000	-
Rv1592c	-	25	134.14	26.98	178.57	0.91	5.42	8.12	1.120	-1.002	1.520	-3.437	-2.620	-2.287	0.000000	0.000000	-
Rv1593c	-	12	167.04	142.21	199.89	167.75	174.81	146.96	0.005	-0.220	0.257	0.011	0.069	-0.174	0.643505	1.000000	-
Rv1594	nadA	10	0.00	0.50	1.26	0.00	0.00	0.00	-0.082	0.055	0.242	-0.082	-0.082	-0.082	0.088014	0.972790	-
Rv1595	nadB	24	0.55	2.77	2.48	4.03	5.23	1.91	-0.496	-0.011	-0.065	0.206	0.385	-0.179	0.153825	1.000000	-
Rv1596	nadC	14	52.42	44.71	54.88	59.10	66.05	47.62	-0.042	-0.250	0.018	0.116	0.265	-0.168	0.998253	1.000000	-
Rv1597	-	12	219.68	227.43	203.34	170.76	192.77	197.08	0.119	0.168	0.010	-0.235	-0.065	-0.034	0.692379	1.000000	-
Rv1598c	-	9	112.92	139.33	127.37	122.05	128.52	146.97	-0.190	0.101	-0.023	-0.082	-0.011	0.176	0.965052	1.000000	-
Rv1599	hisD	17	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv1600	hisC1	26	1.10	3.50	1.67	3.39	3.02	1.61	-0.276	0.204	-0.145	0.184	0.119	-0.159	0.686912	1.000000	-
Rv1601	hisB	15	0.00	0.00	0.00	0.00	0.00	0.31	-0.015	-0.015	-0.015	-0.015	-0.015	0.073	0.307620	1.000000	-
Rv1602	hisH	10	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv1603	hisA	9	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv1604	impA	13	36.75	43.11	38.26	54.77	41.22	60.30	-0.281	-0.077	-0.230	0.236	-0.134	0.364	0.094757	1.000000	-
Rv1605	hisF	7	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv1606	hisI	8	1.65	1.89	0.79	1.78	0.00	0.68	0.117	0.169	-0.083	0.144	-0.294	-0.111	0.678587	1.000000	-
Rv1607	chaA	10	140.93	141.21	147.50	146.30	152.44	158.77	-0.067	-0.064	-0.003	-0.015	0.043	0.099	0.994054	1.000000	-
Rv1608c	bcpB	8	69.99	79.72	93.83	74.81	94.04	89.33	-0.241	-0.065	0.157	-0.151	0.160	0.090	0.950862	1.000000	-
Rv1609	trpE	25	0.00	0.00	0.00	0.00	0.47	0.00	-0.022	-0.022	-0.022	-0.022	0.107	-0.022	0.042649	0.559774	-
Rv1610	-	6	18.93	23.73	13.10	10.18	11.41	8.98	0.304	0.567	-0.099	-0.353	-0.241	-0.472	0.866713	1.000000	-
Rv1611	trpC	11	0.00	0.00	0.00	0.00	0.00	0.49	-0.023	-0.023	-0.023	-0.023	-0.023	0.112	0.308134	1.000000	-
Rv1612	trpB	18	0.00	0.00	0.00	0.27	0.00	0.00	-0.013	-0.013	-0.013	0.064	-0.013	-0.013	0.601999	1.000000	-
Rv1613	trpA	19	4.11	5.90	0.82	7.89	3.37	2.74	-0.004	0.255	-0.652	0.496	-0.127	-0.239	0.342453	1.000000	-
Rv1614	lgt	27	26.33	25.12	25.89	25.23	19.42	19.88	0.129	0.073	0.109	0.078	-0.230	-0.203	0.998659	1.000000	-
Rv1615	-	9	138.98	186.16	141.33	129.31	149.90	145.76	-0.093	0.316	-0.070	-0.193	0.012	-0.027	0.893743	1.000000	-
Rv1616	-	11	135.81	148.43	168.70	151.87	154.54	176.74	-0.193	-0.070	0.109	-0.038	-0.013	0.175	0.810786	1.000000	-
Rv1617	pykA	13	13.33	23.07	6.22	6.54	8.61	18.78	0.046	0.661	-0.662	-0.622	-0.384	0.421	0.011079	0.197221	-
Rv1618	tesB1	18	148.94	151.80	164.17	176.61	166.65	132.36	-0.071	-0.045	0.065	0.167	0.086	-0.236	0.947315	1.000000	-
Rv1619	-	23	88.52	66.69	83.18	78.05	103.23	57.29	0.146	-0.237	0.062	-0.025	0.357	-0.440	0.213194	1.000000	-
Rv1620c	cydC	19	129.35	86.25	107.45	121.83	110.14	99.75	0.235	-0.323	-0.021	0.152	0.013	-0.124	0.530389	1.000000	-
Rv1621c	cydD	20	144.87	112.14	130.70	117.98	142.65	137.19	0.141	-0.215	-0.002	-0.144	0.119	0.065	0.810023	1.000000	-
Rv1622c	cydB	22	136.86	141.35	155.62	157.74	142.09	145.37	-0.095	-0.050	0.084	0.103	-0.043	-0.011	0.977840	1.000000	-
Rv1623c	cydA	23	122.36	123.14	133.62	110.01	139.69	143.45	-0.070	-0.061	0.052	-0.217	0.114	0.151	0.768690	1.000000	-
Rv1624c	-	5	11.73	20.30	25.58	16.83	16.78	24.02	-0.533	0.064	0.337	-0.149	-0.152	0.262	0.410401	1.000000	-
Rv1625c	cya	31	249.79	245.52	241.31	248.75	249.33	229.40	0.033	0.009	-0.016	0.027	0.030	-0.087	0.997672	1.000000	-
Rv1626	-	5	192.05	102.21	200.27	101.31	108.83	137.42	0.439	-0.439	0.498	-0.451	-0.353	-0.029	0.000365	0.009709	-
Rv1627c	-	19	106.24	108.05	135.51	114.59	112.96	111.97	-0.108	-0.085	0.229	-0.004	-0.023	-0.036	0.843846	1.000000	-
Rv1628c	-	7	45.79	38.24	26.37	58.65	34.93	29.71	0.209	-0.023	-0.486	0.534	-0.138	-0.341	0.883177	1.000000	-
Rv1629	polA	42	20.70	25.81	25.67	22.29	31.75	25.81	-0.239	0.022	0.016	-0.153	0.276	0.022	0.730629	1.000000	-
Rv1630	rpsA	17	0.78	1.21	0.00	3.62	1.11	2.02	-0.160	-0.056	-0.369	0.417	-0.079	0.120	0.173096	1.000000	-
Rv1631	coaE	12	20.94	30.37	22.37	41.19	41.47	30.19	-0.476	-0.029	-0.399	0.356	0.365	-0.036	0.686930	1.000000	-
Rv1632c	-	11	78.27	74.45	69.72	84.69	75.75	91.68	-0.014	-0.082	-0.171	0.093	-0.059	0.201	0.881352	1.000000	-
Rv1633	uvrB	38	197.23	189.75	204.29	201.75	206.75	201.89	-0.022	-0.076	0.028	0.010	0.045	0.011	0.994715	1.000000	-
Rv1634	-	33	316.77	280.89	288.46	323.18	313.23	258.23	0.092	-0.078	-0.040	0.121	0.077	-0.197	0.651130	1.000000	-
Rv1635c	-	32	206.59	188.22	188.21	197.93	195.78	204.78	0.067	-0.064	-0.064	0.007	-0.008	0.055	0.976346	1.000000	-
Rv1636	TB15.3	9	370.36	101.28	460.20	64.43	106.61	71.88	0.903	-0.918	1.212	-1.532	-0.847	-1.385	0.000000	0.000000	-
Rv1637c	-	13	334.22	305.12	301.36	291.47	287.13	295.11	0.142	0.013	-0.005	-0.052	-0.074	-0.035	0.994549	1.000000	-
Rv1638	uvrA	39	122.52	112.41	137.09	120.52	125.28	118.90	-0.003	-0.122	0.153	-0.026	0.028	-0.045	0.947711	1.000000	-
Rv1638A	-	5	17.47	31.45	17.54	24.97	22.92	28.78	-0.361	0.337	-0.356	0.055	-0.048	0.227	0.871889	1.000000	-
Rv1639c	-	18	132.61	124.28	108.51	101.83	107.82	118.51	0.190	0.100	-0.087	-0.175	-0.096	0.035	0.883207	1.000000	-
Rv1640c	lysS	65	79.90	102.96	78.16	119.87	119.26	91.31	-0.287	0.060	-0.317	0.270	0.263	-0.105	0.000378	0.009987	-
Rv1641	infC	11	0.00	0.00	0.00	0.00	1.23	0.00	-0.058	-0.058	-0.058	-0.058	0.259	-0.058	0.308134	1.000000	-
Rv1642	rpmI	1	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	TA sites <= 1
Rv1643	rplT	8	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv1644	tsnR	11	209.63	167.12	181.84	195.62	186.60	167.47	0.178	-0.140	-0.022	0.081	0.014	-0.137	0.923464	1.000000	-
Rv1645c	-	23	162.88	195.12	159.78	179.86	171.50	189.60	-0.112	0.141	-0.139	0.027	-0.040	0.101	0.941950	1.000000	-
Rv1646	PE17	18	148.48	165.77	137.51	162.35	154.65	152.86	-0.047	0.107	-0.154	0.077	0.010	-0.007	0.984869	1.000000	-
Rv1647	-	11	228.78	186.47	182.99	171.29	159.39	185.15	0.294	0.006	-0.021	-0.113	-0.214	-0.004	0.823137	1.000000	-
Rv1648	-	14	223.26	196.53	210.18	248.27	214.90	201.52	0.048	-0.132	-0.037	0.198	-0.006	-0.096	0.817777	1.000000	-
Rv1649	pheS	13	0.00	0.00	0.00	0.00	0.35	0.00	-0.017	-0.017	-0.017	-0.017	0.080	-0.017	0.307837	1.000000	-
Rv1650	pheT	37	0.15	0.00	0.00	0.00	0.00	0.00	0.035	-0.007	-0.007	-0.007	-0.007	-0.007	0.600104	1.000000	-
Rv1651c	PE_PGRS30	54	174.84	171.19	177.58	177.10	173.10	158.24	0.023	-0.007	0.045	0.041	0.009	-0.117	0.944876	1.000000	-
Rv1652	argC	15	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv1653	argJ	5	49.42	29.56	54.37	61.23	48.55	36.47	0.077	-0.578	0.202	0.360	0.053	-0.315	0.568232	1.000000	-
Rv1654	argB	4	0.00	0.00	0.00	0.00	0.00	1.18	-0.055	-0.055	-0.055	-0.055	-0.055	0.249	0.311580	1.000000	-
Rv1655	argD	10	1.14	2.04	0.00	2.88	3.43	1.95	-0.170	0.028	-0.466	0.191	0.287	0.009	0.554625	1.000000	-
Rv1656	argF	5	0.00	0.00	3.10	0.00	0.00	0.00	-0.142	-0.142	0.554	-0.142	-0.142	-0.142	0.310484	1.000000	-
Rv1657	argR	3	450.42	404.18	419.15	350.05	279.69	299.35	0.291	0.137	0.189	-0.068	-0.386	-0.290	0.983188	1.000000	-
Rv1658	argG	18	0.00	0.28	0.00	0.00	0.00	0.00	-0.013	0.065	-0.013	-0.013	-0.013	-0.013	0.307385	1.000000	-
Rv1659	argH	8	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv1660	pks10	11	148.29	167.85	165.83	178.18	179.99	128.43	-0.119	0.055	0.038	0.138	0.153	-0.319	0.639524	1.000000	-
Rv1661	pks7	81	42.49	35.05	45.37	47.60	41.43	35.43	0.039	-0.207	0.124	0.186	0.006	-0.193	0.474012	1.000000	-
Rv1662	pks8	67	20.10	24.60	26.50	20.12	24.87	18.57	-0.130	0.108	0.198	-0.129	0.121	-0.221	0.270404	1.000000	-
Rv1663	pks17	18	60.46	43.58	47.73	38.00	53.99	54.68	0.258	-0.172	-0.054	-0.348	0.108	0.125	0.597494	1.000000	-
Rv1664	pks9	47	56.11	57.23	67.49	58.59	49.58	51.69	-0.016	0.010	0.231	0.042	-0.179	-0.124	0.593072	1.000000	-
Rv1665	pks11	13	118.55	140.12	116.64	120.41	136.21	118.89	-0.075	0.157	-0.097	-0.053	0.118	-0.071	0.951112	1.000000	-
Rv1666c	cyp139	20	193.81	182.55	176.02	196.01	220.08	192.21	0.003	-0.081	-0.133	0.019	0.182	-0.009	0.924299	1.000000	-
Rv1667c	-	11	129.69	135.40	181.73	113.02	125.82	152.67	-0.104	-0.044	0.368	-0.294	-0.146	0.124	0.333633	1.000000	-
Rv1668c	-	14	125.19	129.72	129.08	107.70	100.42	93.50	0.126	0.176	0.169	-0.082	-0.178	-0.276	0.828452	1.000000	-
Rv1669	-	9	42.74	40.78	49.39	47.94	42.91	52.26	-0.095	-0.156	0.093	0.054	-0.090	0.167	0.986216	1.000000	-
Rv1670	-	10	46.98	56.09	51.62	52.68	63.37	67.14	-0.238	-0.005	-0.115	-0.088	0.157	0.235	0.615464	1.000000	-
Rv1671	-	15	45.50	41.50	51.65	60.85	43.61	44.54	-0.068	-0.187	0.098	0.315	-0.123	-0.096	0.418675	1.000000	-
Rv1672c	-	21	124.66	110.26	142.84	146.04	123.20	132.97	-0.058	-0.228	0.131	0.162	-0.075	0.031	0.845584	1.000000	-
Rv1673c	-	15	93.84	77.23	89.35	94.36	91.66	82.87	0.085	-0.181	0.017	0.092	0.052	-0.085	0.978915	1.000000	-
Rv1674c	-	9	213.32	128.19	139.54	173.16	175.61	141.06	0.388	-0.325	-0.207	0.095	0.115	-0.192	0.802870	1.000000	-
Rv1675c	-	11	168.49	195.60	214.98	183.16	226.62	169.35	-0.191	0.019	0.152	-0.074	0.226	-0.184	0.818661	1.000000	-
Rv1676	-	10	42.69	49.36	55.98	65.35	52.35	49.23	-0.270	-0.081	0.085	0.291	-0.004	-0.084	0.648466	1.000000	-
Rv1677	dsbF	12	18.84	28.11	21.37	24.90	26.32	31.13	-0.337	0.137	-0.191	-0.010	0.057	0.263	0.680898	1.000000	-
Rv1678	-	10	76.42	79.32	100.02	70.64	84.39	90.28	-0.121	-0.070	0.247	-0.227	0.014	0.106	0.581603	1.000000	-
Rv1679	fadE16	10	28.15	29.14	41.80	31.71	34.53	18.02	-0.101	-0.059	0.396	0.046	0.153	-0.628	0.599489	1.000000	-
Rv1680	-	15	71.70	86.15	72.29	73.31	79.59	67.99	-0.064	0.185	-0.053	-0.034	0.077	-0.135	0.987471	1.000000	-
Rv1681	moeX	15	163.22	134.57	160.60	159.47	138.92	123.42	0.149	-0.120	0.126	0.117	-0.076	-0.240	0.834270	1.000000	-
Rv1682	-	15	71.26	61.29	72.95	57.29	57.18	79.22	0.092	-0.110	0.124	-0.200	-0.202	0.236	0.529741	1.000000	-
Rv1683	-	41	11.40	18.04	11.13	21.86	26.75	16.02	-0.459	0.032	-0.482	0.253	0.495	-0.100	0.000085	0.002553	-
Rv1684	-	4	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv1685c	-	7	35.48	42.12	53.00	55.40	53.82	53.74	-0.414	-0.195	0.105	0.163	0.125	0.123	0.434619	1.000000	-
Rv1686c	-	13	42.92	36.08	34.46	39.05	39.77	39.14	0.137	-0.085	-0.143	0.016	0.039	0.019	0.984699	1.000000	-
Rv1687c	-	11	96.90	113.09	99.16	92.72	109.59	113.26	-0.099	0.114	-0.067	-0.159	0.071	0.116	0.986621	1.000000	-
Rv1688	mpg	8	202.14	149.94	165.08	173.58	139.66	121.18	0.340	-0.078	0.056	0.126	-0.177	-0.375	0.583032	1.000000	-
Rv1689	tyrS	20	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv1690	lprJ	8	79.82	116.95	125.02	80.18	83.65	64.31	-0.188	0.335	0.428	-0.182	-0.125	-0.480	0.284334	1.000000	-
Rv1691	-	11	81.65	72.57	80.97	156.17	128.31	93.87	-0.308	-0.468	-0.319	0.587	0.314	-0.117	0.026867	0.385612	-
Rv1692	-	12	137.37	181.46	159.07	160.23	161.70	130.08	-0.168	0.221	0.036	0.047	0.059	-0.244	0.876079	1.000000	-
Rv1693	-	1	99.97	126.70	90.65	73.94	94.70	60.80	0.127	0.454	-0.007	-0.284	0.053	-0.547	1.000000	1.000000	TA sites <= 1
Rv1694	tlyA	10	133.48	90.54	109.88	88.68	55.73	96.04	0.459	-0.076	0.190	-0.105	-0.730	0.005	0.290926	1.000000	-
Rv1695	ppnK	7	1.08	0.00	0.00	0.00	1.04	0.00	0.183	-0.098	-0.098	-0.098	0.173	-0.098	0.637634	1.000000	-
Rv1696	recN	21	83.93	76.49	98.23	79.47	88.87	68.46	0.022	-0.104	0.237	-0.052	0.100	-0.254	0.661410	1.000000	-
Rv1697	-	17	0.00	0.29	0.91	0.00	1.54	0.59	-0.152	-0.070	0.089	-0.152	0.235	0.010	0.215448	1.000000	-
Rv1698	-	13	64.76	47.43	56.38	61.19	65.39	51.21	0.153	-0.259	-0.031	0.078	0.166	-0.158	0.963155	1.000000	-
Rv1699	pyrG	37	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv1700	-	11	11.63	20.95	15.90	12.93	15.42	15.77	-0.297	0.345	0.032	-0.189	-0.001	0.024	0.876535	1.000000	-
Rv1701	xerD	14	95.54	111.32	109.36	118.63	103.44	122.59	-0.196	0.015	-0.010	0.103	-0.087	0.148	0.917232	1.000000	-
Rv1702c	-	24	68.03	63.22	64.59	70.87	64.14	70.66	0.022	-0.076	-0.047	0.077	-0.057	0.073	0.994020	1.000000	-
Rv1703c	-	14	110.34	120.46	110.31	102.28	119.04	112.53	-0.027	0.095	-0.027	-0.131	0.078	0.000	0.993860	1.000000	-
Rv1704c	cycA	22	121.22	119.98	119.68	122.56	123.03	134.64	-0.026	-0.040	-0.044	-0.011	-0.005	0.120	0.997472	1.000000	-
Rv1705c	PPE22	26	89.07	91.98	88.14	95.60	108.48	99.12	-0.094	-0.050	-0.108	0.003	0.177	0.052	0.890660	1.000000	-
Rv1706c	PPE23	20	106.21	129.17	94.51	97.87	100.45	98.81	0.022	0.293	-0.138	-0.090	-0.054	-0.077	0.958843	1.000000	-
Rv1706A	-	2	13.90	17.90	21.80	11.63	22.58	20.23	-0.284	-0.007	0.220	-0.468	0.261	0.133	0.793259	1.000000	-
Rv1707	-	22	178.01	176.08	165.35	135.78	144.22	161.07	0.149	0.133	0.045	-0.230	-0.146	0.009	0.427943	1.000000	-
Rv1708	-	19	7.91	12.83	11.20	2.45	4.56	8.34	0.003	0.469	0.330	-0.790	-0.430	0.050	0.000773	0.019392	-
Rv1709	-	11	120.07	131.85	106.94	98.46	102.64	127.29	0.065	0.195	-0.095	-0.208	-0.151	0.146	0.812589	1.000000	-
Rv1710	-	15	117.36	109.86	111.30	77.22	100.69	87.17	0.213	0.121	0.139	-0.361	0.001	-0.196	0.490820	1.000000	-
Rv1711	-	10	10.51	9.77	11.87	15.89	18.96	18.88	-0.316	-0.387	-0.195	0.113	0.311	0.306	0.644642	1.000000	-
Rv1712	cmk	13	29.64	13.41	29.60	58.54	43.37	18.70	-0.103	-1.015	-0.105	0.772	0.378	-0.651	0.201034	1.000000	-
Rv1713	engA	12	0.32	0.42	0.00	0.00	0.00	0.39	0.037	0.062	-0.053	-0.053	-0.053	0.055	0.692011	1.000000	-
Rv1714	-	8	54.11	68.16	78.22	63.47	77.71	90.41	-0.382	-0.074	0.112	-0.170	0.103	0.309	0.484544	1.000000	-
Rv1715	fadB3	9	66.20	39.82	56.65	63.93	45.51	58.49	0.245	-0.423	0.037	0.198	-0.251	0.079	0.814427	1.000000	-
Rv1716	-	12	54.93	65.07	57.93	73.20	49.04	68.05	-0.147	0.078	-0.077	0.237	-0.297	0.138	0.875557	1.000000	-
Rv1717	-	4	197.43	215.06	228.24	195.93	239.63	183.12	-0.086	0.034	0.118	-0.097	0.187	-0.192	0.934059	1.000000	-
Rv1718	-	7	130.90	171.92	179.42	146.62	147.25	126.10	-0.193	0.187	0.247	-0.035	-0.029	-0.245	0.813982	1.000000	-
Rv1719	-	7	109.60	121.44	134.66	95.02	107.17	118.07	-0.058	0.084	0.227	-0.255	-0.089	0.045	0.939904	1.000000	-
Rv1720c	-	9	21.44	20.92	20.14	19.66	22.17	27.66	-0.030	-0.059	-0.103	-0.131	0.009	0.275	0.876689	1.000000	-
Rv1721c	-	2	176.71	134.85	186.40	203.72	144.35	241.16	-0.035	-0.413	0.040	0.165	-0.318	0.403	0.849682	1.000000	-
Rv1722	-	23	253.03	272.25	243.59	240.29	248.56	254.83	0.005	0.109	-0.049	-0.068	-0.020	0.015	0.969185	1.000000	-
Rv1723	-	17	253.06	218.06	207.03	238.20	230.03	225.00	0.144	-0.066	-0.140	0.058	0.009	-0.022	0.960107	1.000000	-
Rv1724c	-	13	141.15	154.58	152.15	142.63	150.39	157.66	-0.083	0.044	0.022	-0.068	0.006	0.072	0.988810	1.000000	-
Rv1725c	-	13	112.90	106.84	111.65	117.11	118.32	128.81	-0.037	-0.113	-0.052	0.014	0.028	0.146	0.994224	1.000000	-
Rv1726	-	16	96.62	106.04	93.45	89.24	87.17	80.23	0.065	0.193	0.020	-0.044	-0.076	-0.188	0.983040	1.000000	-
Rv1727	-	6	190.44	175.11	152.16	151.61	144.36	191.07	0.180	0.063	-0.134	-0.139	-0.207	0.185	0.995641	1.000000	-
Rv1728c	-	20	51.95	55.07	67.65	59.09	67.74	60.04	-0.196	-0.119	0.155	-0.026	0.157	-0.005	0.939165	1.000000	-
Rv1729c	-	22	72.20	58.23	64.75	69.72	81.84	72.15	0.045	-0.243	-0.101	-0.002	0.215	0.044	0.836988	1.000000	-
Rv1730c	-	30	29.42	21.85	40.07	19.97	26.03	27.75	0.082	-0.276	0.471	-0.381	-0.068	0.010	0.008121	0.154302	-
Rv1731	gabD2	25	110.21	87.30	95.72	77.97	92.32	67.74	0.301	-0.019	0.107	-0.173	0.057	-0.363	0.045244	0.586116	-
Rv1732c	-	8	66.22	87.62	104.23	79.14	75.46	101.19	-0.348	0.031	0.269	-0.107	-0.172	0.228	0.432393	1.000000	-
Rv1733c	-	5	38.74	46.97	59.87	58.26	61.82	49.84	-0.397	-0.148	0.172	0.136	0.215	-0.070	0.915408	1.000000	-
Rv1734c	-	3	105.42	241.51	160.19	122.44	151.15	76.72	-0.422	0.737	0.159	-0.215	0.078	-0.856	0.335239	1.000000	-
Rv1735c	-	7	76.09	46.64	61.61	52.76	65.23	74.42	0.258	-0.393	-0.025	-0.231	0.051	0.228	0.845404	1.000000	-
Rv1736c	narX	42	138.86	108.91	114.53	117.49	120.24	109.65	0.223	-0.114	-0.045	-0.009	0.023	-0.105	0.383700	1.000000	-
Rv1737c	narK2	15	140.46	138.21	144.43	131.29	131.78	121.55	0.059	0.037	0.098	-0.035	-0.030	-0.142	0.966647	1.000000	-
Rv1738	-	3	84.14	37.23	43.58	65.97	38.45	29.67	0.701	-0.377	-0.175	0.372	-0.336	-0.662	0.510180	1.000000	-
Rv1739c	-	41	123.08	93.55	100.55	115.99	96.15	96.09	0.230	-0.149	-0.050	0.147	-0.111	-0.112	0.070962	0.827885	-
Rv1740	-	4	134.70	132.40	117.85	138.03	129.64	93.28	0.111	0.087	-0.074	0.145	0.058	-0.396	0.961267	1.000000	-
Rv1741	-	7	153.14	199.73	172.30	190.38	211.72	162.84	-0.239	0.133	-0.074	0.066	0.215	-0.153	0.747145	1.000000	-
Rv1742	-	13	211.18	212.95	196.61	211.15	226.41	166.22	0.048	0.060	-0.053	0.048	0.146	-0.288	0.824931	1.000000	-
Rv1743	pknE	33	189.97	191.11	183.35	186.37	187.23	176.05	0.032	0.041	-0.018	0.005	0.012	-0.075	0.996921	1.000000	-
Rv1744c	-	7	280.59	243.80	238.32	271.59	210.91	241.27	0.176	-0.023	-0.055	0.130	-0.227	-0.037	0.976970	1.000000	-
Rv1745c	idi	14	46.03	46.57	43.80	47.33	45.44	53.24	-0.029	-0.014	-0.094	0.007	-0.046	0.162	0.999297	1.000000	-
Rv1746	pknF	13	68.03	120.59	87.53	101.32	88.22	91.98	-0.423	0.359	-0.082	0.118	-0.071	-0.014	0.556505	1.000000	-
Rv1747	-	33	147.95	168.71	158.68	164.30	199.54	152.17	-0.154	0.029	-0.057	-0.008	0.265	-0.115	0.659843	1.000000	-
Rv1748	-	12	110.72	136.24	127.78	112.17	101.64	130.14	-0.109	0.179	0.090	-0.091	-0.227	0.115	0.855206	1.000000	-
Rv1749c	-	16	117.09	137.21	113.88	134.22	113.57	140.17	-0.102	0.118	-0.140	0.088	-0.144	0.148	0.934608	1.000000	-
Rv1750c	fadD1	40	105.79	95.68	101.36	97.04	82.89	108.57	0.097	-0.041	0.039	-0.021	-0.237	0.133	0.917024	1.000000	-
Rv1751	-	19	67.20	57.64	77.34	71.55	76.05	71.51	-0.059	-0.264	0.131	0.025	0.108	0.025	0.828354	1.000000	-
Rv1752	-	5	120.98	76.48	99.78	96.76	106.61	99.16	0.263	-0.365	-0.003	-0.045	0.089	-0.011	0.838785	1.000000	-
Rv1753c	PPE24	66	26.67	27.63	29.86	24.03	23.68	25.85	0.018	0.061	0.156	-0.108	-0.125	-0.020	0.965483	1.000000	-
Rv1754c	-	40	138.12	125.57	125.75	132.69	126.97	133.58	0.080	-0.053	-0.051	0.024	-0.038	0.033	0.953640	1.000000	-
Rv1755c	plcD	19	18.41	12.36	15.45	19.18	16.00	11.63	0.191	-0.240	-0.004	0.238	0.034	-0.302	0.903735	1.000000	-
Rv1756c	-	23	313.99	307.80	332.57	325.69	297.51	308.59	-0.002	-0.030	0.080	0.050	-0.078	-0.026	0.987170	1.000000	-
Rv1757c	-	4	240.40	251.93	228.80	254.16	245.98	177.86	0.043	0.109	-0.027	0.122	0.075	-0.381	0.864578	1.000000	-
Rv1758	cut1	11	267.54	268.03	249.21	244.20	223.63	209.51	0.132	0.135	0.032	0.003	-0.121	-0.213	0.994176	1.000000	-
Rv1759c	wag22	26	141.66	135.25	131.18	136.98	127.30	117.88	0.101	0.037	-0.006	0.055	-0.047	-0.154	0.926066	1.000000	-
Rv1760	-	28	98.29	104.09	124.17	105.84	103.72	114.87	-0.136	-0.057	0.187	-0.034	-0.062	0.079	0.864444	1.000000	-
Rv1761c	-	6	96.00	89.37	85.84	74.98	81.96	80.82	0.169	0.071	0.016	-0.168	-0.047	-0.066	0.960708	1.000000	-
Rv1762c	-	10	165.73	143.30	171.58	150.93	171.14	171.56	0.029	-0.175	0.077	-0.102	0.074	0.077	0.947884	1.000000	-
Rv1763	-	4	199.73	262.66	241.43	257.35	242.52	164.76	-0.187	0.200	0.080	0.171	0.087	-0.457	0.545581	1.000000	-
Rv1764	-	23	314.92	306.77	337.50	322.26	310.10	308.25	-0.008	-0.045	0.091	0.025	-0.030	-0.038	0.992841	1.000000	-
Rv1765c	-	7	84.33	112.90	80.70	93.87	79.53	98.98	-0.115	0.286	-0.175	0.032	-0.194	0.104	0.610009	1.000000	-
Rv1765A	-	3	64.40	84.70	81.26	69.61	62.60	74.05	-0.164	0.206	0.150	-0.060	-0.202	0.024	0.989023	1.000000	-
Rv1766	-	3	122.99	133.35	132.46	119.78	113.38	122.92	-0.013	0.099	0.090	-0.050	-0.126	-0.014	0.999684	1.000000	-
Rv1767	-	7	210.65	194.04	143.62	193.35	174.09	149.45	0.241	0.125	-0.297	0.120	-0.027	-0.241	0.853748	1.000000	-
Rv1768	PE_PGRS31	21	146.59	141.98	178.76	165.65	178.94	162.13	-0.143	-0.187	0.135	0.028	0.136	-0.002	0.717387	1.000000	-
Rv1769	-	22	176.27	165.40	173.63	191.45	186.72	156.75	0.010	-0.079	-0.011	0.126	0.091	-0.155	0.862273	1.000000	-
Rv1770	-	17	301.52	278.68	289.56	332.27	333.91	336.28	-0.049	-0.160	-0.106	0.089	0.096	0.106	0.905602	1.000000	-
Rv1771	-	26	179.06	190.34	177.98	178.73	178.68	188.13	-0.024	0.062	-0.033	-0.027	-0.027	0.045	0.993860	1.000000	-
Rv1772	-	4	16.42	27.02	15.62	17.38	31.40	24.33	-0.336	0.245	-0.390	-0.272	0.429	0.118	0.943841	1.000000	-
Rv1773c	-	11	86.73	84.72	75.02	100.18	90.72	81.03	0.005	-0.027	-0.192	0.203	0.067	-0.087	0.905913	1.000000	-
Rv1774	-	30	108.47	123.91	115.10	112.53	123.52	125.52	-0.118	0.066	-0.036	-0.068	0.061	0.084	0.954068	1.000000	-
Rv1775	-	14	79.15	84.31	117.16	117.85	100.76	93.91	-0.304	-0.218	0.234	0.242	0.026	-0.070	0.504876	1.000000	-
Rv1776c	-	12	75.24	69.69	89.17	80.00	77.95	70.45	-0.033	-0.136	0.198	0.050	0.015	-0.122	0.988862	1.000000	-
Rv1777	cyp144	27	83.98	81.22	96.80	87.25	81.00	70.64	0.008	-0.037	0.202	0.060	-0.041	-0.226	0.821742	1.000000	-
Rv1778c	-	5	37.96	30.60	52.67	35.25	42.21	62.75	-0.177	-0.448	0.248	-0.271	-0.041	0.480	0.291166	1.000000	-
Rv1779c	-	14	153.58	174.90	190.09	157.18	195.67	172.09	-0.174	0.008	0.125	-0.142	0.166	-0.015	0.950060	1.000000	-
Rv1780	-	13	95.52	147.68	102.95	132.91	140.21	138.31	-0.385	0.218	-0.282	0.071	0.146	0.127	0.092583	1.000000	-
Rv1781c	malQ	27	168.99	163.40	148.16	169.30	165.63	156.73	0.059	0.012	-0.125	0.061	0.031	-0.047	0.963499	1.000000	-
Rv1782	-	20	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv1783	-	17	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv1784	-	41	0.00	0.13	0.00	0.00	0.00	0.00	-0.006	0.030	-0.006	-0.006	-0.006	-0.006	0.306729	1.000000	-
Rv1785c	cyp143	22	109.02	80.18	102.74	84.57	97.01	94.09	0.195	-0.226	0.113	-0.153	0.035	-0.007	0.664506	1.000000	-
Rv1786	-	1	117.30	95.85	106.70	126.20	133.60	124.85	-0.001	-0.280	-0.132	0.100	0.179	0.085	1.000000	1.000000	TA sites <= 1
Rv1787	PPE25	19	358.82	352.34	340.68	333.64	305.13	313.75	0.102	0.076	0.028	-0.002	-0.129	-0.089	0.995642	1.000000	-
Rv1788	PE18	5	246.81	268.82	171.37	198.84	180.78	225.48	0.193	0.313	-0.321	-0.112	-0.246	0.065	0.653520	1.000000	-
Rv1789	PPE26	20	147.14	125.69	124.61	125.92	117.43	118.78	0.209	-0.010	-0.022	-0.007	-0.104	-0.088	0.971085	1.000000	-
Rv1790	PPE27	20	353.80	320.74	348.30	331.27	294.19	280.32	0.136	-0.003	0.114	0.043	-0.126	-0.194	0.977915	1.000000	-
Rv1791	PE19	6	66.13	61.86	63.58	68.29	89.10	58.33	-0.035	-0.124	-0.088	0.008	0.369	-0.203	0.401634	1.000000	-
Rv1793	esxN	5	122.99	148.17	138.90	112.20	118.03	134.35	-0.067	0.192	0.102	-0.194	-0.124	0.055	0.762811	1.000000	-
Rv1794	-	22	0.00	0.00	0.00	0.00	0.00	0.21	-0.010	-0.010	-0.010	-0.010	-0.010	0.050	0.307172	1.000000	-
Rv1795	-	22	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv1796	mycP5	36	2.09	1.42	2.42	1.68	0.33	2.40	0.077	-0.068	0.142	-0.009	-0.336	0.139	0.869455	1.000000	-
Rv1797	-	15	0.50	0.00	0.00	0.00	0.00	0.00	0.114	-0.024	-0.024	-0.024	-0.024	-0.024	0.602744	1.000000	-
Rv1798	-	30	18.34	18.31	19.92	9.39	4.85	12.89	0.300	0.299	0.395	-0.397	-0.944	-0.083	0.000008	0.000293	-
Rv1799	lppT	2	47.92	61.75	54.80	77.99	90.28	98.10	-0.537	-0.202	-0.361	0.112	0.311	0.425	0.681515	1.000000	-
Rv1800	PPE28	40	79.45	81.07	74.30	76.23	82.05	72.84	0.031	0.058	-0.060	-0.025	0.075	-0.087	0.995258	1.000000	-
Rv1801	PPE29	25	73.23	81.10	71.80	85.83	83.91	77.94	-0.102	0.036	-0.129	0.113	0.083	-0.018	0.938815	1.000000	-
Rv1802	PPE30	21	173.21	175.70	174.69	168.55	144.63	168.30	0.047	0.067	0.059	0.009	-0.205	0.007	0.970706	1.000000	-
Rv1803c	PE_PGRS32	34	131.86	140.27	138.45	124.35	127.70	132.40	-0.007	0.079	0.061	-0.088	-0.051	-0.001	0.993665	1.000000	-
Rv1804c	-	10	81.21	84.17	81.96	91.21	73.88	93.76	-0.052	-0.003	-0.039	0.106	-0.180	0.144	0.934096	1.000000	-
Rv1805c	-	6	28.26	24.42	21.30	31.96	30.24	17.34	0.121	-0.056	-0.218	0.273	0.204	-0.453	0.755601	1.000000	-
Rv1806	PE20	5	36.51	33.00	61.81	48.81	32.30	22.65	-0.090	-0.217	0.597	0.285	-0.244	-0.676	0.381086	1.000000	-
Rv1807	PPE31	21	56.18	79.37	69.55	95.50	98.89	69.64	-0.443	0.020	-0.158	0.273	0.321	-0.156	0.024689	0.366212	-
Rv1808	PPE32	29	246.96	210.48	228.51	224.87	221.17	215.60	0.134	-0.092	0.024	0.002	-0.022	-0.058	0.971663	1.000000	-
Rv1809	PPE33	24	92.42	78.21	80.89	84.89	96.39	79.80	0.107	-0.120	-0.074	-0.009	0.165	-0.093	0.958259	1.000000	-
Rv1810	-	12	144.76	133.69	143.36	133.48	138.38	133.53	0.068	-0.043	0.054	-0.045	0.005	-0.044	0.998015	1.000000	-
Rv1811	mgtC	16	247.32	277.45	268.48	276.72	254.89	277.99	-0.109	0.054	0.007	0.050	-0.066	0.056	0.988221	1.000000	-
Rv1812c	-	23	182.47	153.72	171.39	159.05	167.34	164.78	0.129	-0.111	0.041	-0.064	0.007	-0.014	0.985710	1.000000	-
Rv1813c	-	9	105.50	135.50	139.79	121.31	122.27	152.33	-0.283	0.063	0.107	-0.090	-0.079	0.227	0.340035	1.000000	-
Rv1814	erg3	24	111.51	105.61	102.62	102.58	101.79	119.36	0.054	-0.021	-0.061	-0.061	-0.072	0.148	0.952689	1.000000	-
Rv1815	-	8	62.84	96.74	76.35	78.05	54.84	73.13	-0.214	0.371	0.049	0.078	-0.394	-0.010	0.891282	1.000000	-
Rv1816	-	15	191.73	169.33	169.67	163.90	139.27	165.87	0.197	0.023	0.025	-0.023	-0.250	-0.006	0.954165	1.000000	-
Rv1817	-	29	143.22	138.61	142.61	142.42	147.94	158.75	-0.023	-0.068	-0.029	-0.031	0.022	0.121	0.989349	1.000000	-
Rv1818c	PE_PGRS33	16	259.90	206.51	244.62	221.86	194.79	225.62	0.200	-0.124	0.115	-0.023	-0.207	0.000	0.937080	1.000000	-
Rv1819c	-	33	164.82	157.63	153.30	179.30	167.06	165.63	0.002	-0.061	-0.100	0.120	0.021	0.009	0.958376	1.000000	-
Rv1820	ilvG	20	198.22	180.97	197.41	183.33	173.72	190.34	0.079	-0.048	0.074	-0.030	-0.106	0.022	0.994646	1.000000	-
Rv1821	secA2	39	60.44	126.01	83.60	154.05	164.21	80.85	-0.832	0.169	-0.395	0.449	0.538	-0.441	0.000000	0.000014	-
Rv1822	pgsA2	17	3.89	4.46	5.13	2.70	4.88	6.11	-0.100	-0.010	0.088	-0.308	0.052	0.221	0.977813	1.000000	-
Rv1823	-	15	96.83	127.21	96.96	101.54	108.74	98.82	-0.112	0.265	-0.110	-0.046	0.048	-0.084	0.622162	1.000000	-
Rv1824	-	5	78.64	66.27	57.46	57.88	59.38	82.51	0.216	-0.015	-0.206	-0.196	-0.162	0.281	0.942058	1.000000	-
Rv1825	-	10	89.73	85.95	95.61	71.93	72.92	80.19	0.111	0.052	0.198	-0.189	-0.171	-0.042	0.866296	1.000000	-
Rv1826	gcvH	9	3.70	9.05	0.00	12.37	11.44	7.35	-0.502	0.190	-1.301	0.496	0.416	0.004	0.000046	0.001483	-
Rv1827	cfp17	8	0.48	0.65	0.00	1.22	0.00	0.00	0.024	0.068	-0.109	0.205	-0.109	-0.109	0.527235	1.000000	-
Rv1828	-	14	7.64	0.36	7.17	0.00	0.00	0.00	0.748	-0.491	0.693	-0.590	-0.590	-0.590	0.000001	0.000045	-
Rv1829	-	9	68.28	106.70	112.42	110.80	126.26	100.08	-0.574	0.034	0.106	0.086	0.267	-0.054	0.283563	1.000000	-
Rv1830	-	11	8.21	10.11	19.92	21.66	18.21	10.26	-0.578	-0.384	0.337	0.434	0.234	-0.371	0.638305	1.000000	-
Rv1831	-	5	117.58	126.50	119.51	160.19	141.17	139.88	-0.183	-0.081	-0.160	0.248	0.071	0.058	0.955595	1.000000	-
Rv1832	gcvB	57	11.05	26.87	5.18	40.23	30.88	22.37	-0.791	0.199	-1.447	0.704	0.370	-0.021	0.000000	0.000000	-
Rv1833c	-	14	94.16	99.82	113.64	93.46	76.11	80.51	0.018	0.098	0.276	0.007	-0.272	-0.196	0.662958	1.000000	-
Rv1834	-	12	191.21	206.97	197.09	178.52	168.62	149.00	0.070	0.182	0.113	-0.026	-0.106	-0.279	0.887033	1.000000	-
Rv1835c	-	41	284.09	255.46	280.95	253.12	252.83	255.67	0.106	-0.045	0.090	-0.058	-0.059	-0.044	0.871306	1.000000	-
Rv1836c	-	43	67.72	78.47	80.98	57.48	85.95	58.78	-0.074	0.125	0.167	-0.293	0.248	-0.263	0.066469	0.789322	-
Rv1837c	glcB	26	28.66	31.71	37.81	47.27	35.79	32.23	-0.270	-0.145	0.077	0.365	0.007	-0.124	0.297149	1.000000	-
Rv1838c	-	10	424.83	432.91	400.05	399.29	407.02	399.93	0.048	0.075	-0.037	-0.040	-0.013	-0.038	0.998976	1.000000	-
Rv1839c	-	3	136.38	91.47	147.76	115.44	131.38	90.60	0.191	-0.360	0.303	-0.040	0.139	-0.373	0.903353	1.000000	-
Rv1840c	PE_PGRS34	16	82.64	84.52	84.13	81.89	62.13	70.93	0.084	0.114	0.108	0.071	-0.301	-0.123	0.977284	1.000000	-
Rv1841c	-	13	213.70	171.75	192.02	175.62	200.09	186.65	0.166	-0.142	0.015	-0.110	0.073	-0.025	0.987166	1.000000	-
Rv1842c	-	16	177.48	174.81	153.33	175.48	149.66	145.59	0.122	0.100	-0.083	0.106	-0.117	-0.155	0.865742	1.000000	-
Rv1843c	guaB1	23	286.76	242.45	272.82	248.02	250.02	266.28	0.133	-0.105	0.062	-0.072	-0.061	0.028	0.925161	1.000000	-
Rv1844c	gnd1	17	234.55	242.94	241.71	232.42	228.91	223.99	0.003	0.052	0.045	-0.010	-0.032	-0.062	0.997696	1.000000	-
Rv1845c	-	14	454.72	328.14	248.09	4.67	6.44	325.38	0.981	0.516	0.120	-4.590	-4.348	0.504	0.000000	0.000000	-
Rv1846c	-	3	81.08	76.68	70.71	80.67	80.58	116.75	-0.055	-0.130	-0.240	-0.062	-0.063	0.445	0.613354	1.000000	-
Rv1847	-	5	229.46	223.38	236.70	244.20	208.60	266.37	-0.032	-0.070	0.011	0.056	-0.167	0.179	0.998139	1.000000	-
Rv1848	ureA	2	186.87	211.45	158.32	142.82	158.18	178.38	0.111	0.285	-0.121	-0.265	-0.123	0.046	0.948495	1.000000	-
Rv1849	ureB	6	64.22	71.36	80.87	69.19	67.19	58.32	-0.087	0.055	0.224	0.013	-0.026	-0.216	0.966924	1.000000	-
Rv1850	ureC	18	129.82	94.08	123.23	128.88	124.57	121.95	0.104	-0.340	0.032	0.094	0.047	0.017	0.700243	1.000000	-
Rv1851	ureF	2	355.43	284.87	496.28	369.03	469.68	382.22	-0.143	-0.457	0.333	-0.089	0.254	-0.039	0.944651	1.000000	-
Rv1852	ureG	5	263.48	195.06	251.04	235.23	198.12	149.25	0.285	-0.139	0.217	0.125	-0.118	-0.515	0.929158	1.000000	-
Rv1853	ureD	6	94.01	64.82	82.30	104.92	86.91	82.42	0.123	-0.381	-0.058	0.274	0.016	-0.056	0.960211	1.000000	-
Rv1854c	ndh	19	101.40	94.52	96.09	60.77	69.11	95.58	0.222	0.125	0.148	-0.472	-0.300	0.141	0.142114	1.000000	-
Rv1855c	-	14	199.18	210.29	204.08	222.49	225.53	233.83	-0.114	-0.037	-0.079	0.042	0.062	0.113	0.872475	1.000000	-
Rv1856c	-	5	325.95	326.16	191.64	364.52	315.96	291.15	0.106	0.107	-0.645	0.265	0.062	-0.055	0.741572	1.000000	-
Rv1857	modA	6	124.10	158.28	132.79	143.38	140.52	180.45	-0.232	0.107	-0.138	-0.031	-0.059	0.291	0.867138	1.000000	-
Rv1858	modB	22	182.67	163.00	187.12	147.36	158.32	160.10	0.131	-0.029	0.164	-0.170	-0.070	-0.054	0.575622	1.000000	-
Rv1859	modC	16	244.71	211.75	217.59	195.34	224.03	220.86	0.156	-0.048	-0.009	-0.161	0.032	0.012	0.938943	1.000000	-
Rv1860	apa	16	96.00	136.18	106.63	161.86	153.21	140.78	-0.444	0.039	-0.300	0.280	0.203	0.085	0.396819	1.000000	-
Rv1861	-	7	46.77	46.36	62.70	51.06	51.94	68.54	-0.202	-0.214	0.185	-0.087	-0.065	0.304	0.826924	1.000000	-
Rv1862	adhA	15	330.77	313.53	360.50	331.93	319.29	299.50	0.021	-0.055	0.143	0.026	-0.029	-0.120	0.971423	1.000000	-
Rv1863c	-	10	260.94	212.08	235.97	214.38	230.20	217.35	0.188	-0.105	0.046	-0.090	0.011	-0.071	0.988634	1.000000	-
Rv1864c	-	10	315.46	311.72	305.90	294.41	263.79	229.42	0.135	0.118	0.092	0.037	-0.118	-0.316	0.762499	1.000000	-
Rv1865c	-	13	119.76	115.76	140.36	136.93	135.09	125.17	-0.101	-0.148	0.119	0.085	0.066	-0.040	0.952229	1.000000	-
Rv1866	-	34	90.28	85.69	94.18	102.97	97.28	90.94	-0.049	-0.120	0.009	0.132	0.053	-0.039	0.913094	1.000000	-
Rv1867	-	20	112.00	109.26	134.62	124.32	130.83	131.90	-0.139	-0.173	0.116	0.006	0.076	0.088	0.929780	1.000000	-
Rv1868	-	32	197.03	181.46	200.85	185.52	179.17	189.05	0.060	-0.056	0.087	-0.025	-0.074	0.002	0.991227	1.000000	-
Rv1869c	-	26	138.53	131.15	129.70	134.20	120.21	121.99	0.096	0.020	0.004	0.052	-0.101	-0.081	0.941099	1.000000	-
Rv1870c	-	12	93.82	130.96	96.25	92.97	102.34	90.48	-0.103	0.357	-0.068	-0.115	0.016	-0.153	0.573137	1.000000	-
Rv1871c	-	9	179.77	171.73	166.69	170.19	168.63	202.86	0.025	-0.040	-0.081	-0.052	-0.065	0.195	0.985101	1.000000	-
Rv1872c	lldD2	14	238.66	188.08	222.14	199.30	170.96	252.48	0.168	-0.168	0.066	-0.087	-0.302	0.247	0.750980	1.000000	-
Rv1873	-	10	301.63	263.20	292.86	271.03	255.44	244.53	0.149	-0.044	0.108	-0.002	-0.086	-0.148	0.870729	1.000000	-
Rv1874	-	12	173.79	183.13	171.66	185.90	181.29	179.06	-0.043	0.031	-0.060	0.052	0.017	-0.001	0.998879	1.000000	-
Rv1875	-	5	303.36	342.43	271.24	347.97	319.04	293.12	-0.044	0.128	-0.202	0.151	0.028	-0.092	0.975861	1.000000	-
Rv1876	bfrA	10	138.69	152.06	139.09	158.02	150.71	169.61	-0.122	0.006	-0.118	0.060	-0.006	0.159	0.919039	1.000000	-
Rv1877	-	33	191.74	184.04	177.72	174.84	182.27	193.16	0.058	0.001	-0.048	-0.071	-0.013	0.069	0.977033	1.000000	-
Rv1878	glnA3	27	81.80	62.00	79.89	75.47	72.93	73.09	0.132	-0.241	0.100	0.023	-0.023	-0.020	0.926943	1.000000	-
Rv1879	-	19	81.25	112.86	93.35	95.41	93.88	98.63	-0.226	0.224	-0.037	-0.007	-0.029	0.039	0.891416	1.000000	-
Rv1880c	cyp140	16	108.92	105.69	125.25	103.84	108.27	92.86	0.019	-0.023	0.212	-0.047	0.010	-0.201	0.887902	1.000000	-
Rv1881c	lppE	8	57.79	66.71	49.69	64.46	56.61	72.18	-0.077	0.114	-0.276	0.069	-0.105	0.221	0.897108	1.000000	-
Rv1882c	-	15	183.24	196.06	202.43	200.15	192.01	192.18	-0.083	0.012	0.057	0.041	-0.017	-0.016	0.994904	1.000000	-
Rv1883c	-	7	212.99	245.56	243.71	247.82	224.65	236.32	-0.140	0.061	0.050	0.074	-0.065	0.007	0.987169	1.000000	-
Rv1884c	rpfC	6	58.94	69.54	58.40	66.89	68.56	95.10	-0.222	-0.001	-0.234	-0.053	-0.020	0.425	0.701385	1.000000	-
Rv1885c	-	14	212.45	183.21	213.39	208.97	200.38	194.15	0.070	-0.138	0.077	0.047	-0.012	-0.056	0.993410	1.000000	-
Rv1886c	fbpB	25	134.30	144.40	126.64	129.09	137.48	157.15	-0.040	0.061	-0.121	-0.095	-0.007	0.180	0.644804	1.000000	-
Rv1887	-	25	181.92	162.19	184.28	167.28	187.24	149.13	0.079	-0.082	0.097	-0.039	0.119	-0.200	0.897654	1.000000	-
Rv1888c	-	18	161.77	169.25	159.58	160.73	164.84	157.38	-0.004	0.059	-0.023	-0.013	0.022	-0.043	0.999936	1.000000	-
Rv1888A	-	0	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	TA sites <= 1
Rv1889c	-	4	206.69	127.87	137.65	135.34	154.78	159.31	0.417	-0.255	-0.153	-0.177	0.011	0.051	0.969766	1.000000	-
Rv1890c	-	8	98.57	91.64	88.91	92.35	113.18	82.77	0.057	-0.043	-0.084	-0.033	0.247	-0.182	0.913710	1.000000	-
Rv1891	-	8	292.75	230.79	232.74	254.72	179.14	209.81	0.321	-0.015	-0.004	0.124	-0.372	-0.150	0.674395	1.000000	-
Rv1892	-	7	307.83	254.25	284.08	271.98	298.15	247.93	0.148	-0.123	0.034	-0.028	0.102	-0.159	0.992778	1.000000	-
Rv1893	-	0	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	TA sites <= 1
Rv1894c	-	14	153.83	122.70	141.41	124.71	136.26	140.59	0.166	-0.149	0.048	-0.126	-0.003	0.040	0.987678	1.000000	-
Rv1895	-	18	103.35	73.10	98.03	90.18	92.85	89.18	0.173	-0.299	0.100	-0.014	0.026	-0.029	0.620354	1.000000	-
Rv1896c	-	24	133.76	121.69	132.94	145.38	116.63	120.64	0.056	-0.076	0.047	0.172	-0.134	-0.088	0.931372	1.000000	-
Rv1897c	-	5	164.39	95.57	182.34	165.64	158.60	143.16	0.113	-0.639	0.258	0.124	0.063	-0.080	0.575582	1.000000	-
Rv1898	-	3	243.56	226.86	231.11	245.72	224.05	206.54	0.083	-0.017	0.009	0.096	-0.035	-0.150	0.995786	1.000000	-
Rv1899c	lppD	13	226.80	231.20	247.99	223.38	243.04	224.27	-0.037	-0.010	0.089	-0.058	0.061	-0.053	0.998448	1.000000	-
Rv1900c	lipJ	24	106.71	121.40	118.06	125.17	113.32	101.01	-0.095	0.084	0.045	0.126	-0.012	-0.170	0.879190	1.000000	-
Rv1901	cinA	18	110.13	131.81	130.11	130.95	127.66	127.86	-0.191	0.058	0.040	0.049	0.014	0.016	0.912511	1.000000	-
Rv1902c	nanT	33	105.49	111.89	103.39	98.21	103.73	97.87	0.027	0.108	-0.001	-0.071	0.004	-0.076	0.945854	1.000000	-
Rv1903	-	5	72.93	62.14	88.19	73.09	85.56	94.72	-0.116	-0.331	0.142	-0.113	0.101	0.240	0.980044	1.000000	-
Rv1904	-	10	337.98	307.49	372.35	310.81	325.76	300.56	0.052	-0.082	0.190	-0.067	-0.000	-0.115	0.990263	1.000000	-
Rv1905c	aao	18	145.27	147.37	147.03	131.66	127.80	146.03	0.043	0.063	0.060	-0.094	-0.135	0.050	0.961414	1.000000	-
Rv1906c	-	9	98.20	115.02	115.26	149.29	154.24	88.01	-0.276	-0.059	-0.056	0.304	0.349	-0.427	0.314936	1.000000	-
Rv1907c	-	10	56.12	75.98	70.88	77.80	58.12	87.51	-0.316	0.090	-0.004	0.122	-0.269	0.282	0.656252	1.000000	-
Rv1908c	katG	39	49.70	67.44	51.80	84.13	83.99	73.05	-0.423	-0.018	-0.369	0.281	0.279	0.090	0.004215	0.085367	-
Rv1909c	furA	12	112.41	125.04	121.34	121.39	145.31	121.98	-0.142	0.005	-0.037	-0.036	0.214	-0.029	0.973727	1.000000	-
Rv1910c	-	13	226.78	205.02	222.32	236.20	182.89	185.23	0.110	-0.032	0.082	0.168	-0.193	-0.175	0.717546	1.000000	-
Rv1911c	lppC	9	86.81	88.52	104.75	107.81	82.14	79.18	-0.072	-0.046	0.185	0.225	-0.148	-0.198	0.903069	1.000000	-
Rv1912c	fadB5	15	110.29	96.53	109.47	89.95	130.23	75.92	0.107	-0.077	0.096	-0.173	0.337	-0.404	0.279364	1.000000	-
Rv1913	-	11	181.47	177.51	194.39	164.43	162.15	167.69	0.054	0.023	0.151	-0.084	-0.104	-0.057	0.982243	1.000000	-
Rv1914c	-	7	88.70	99.50	109.45	89.23	101.32	116.88	-0.176	-0.018	0.113	-0.168	0.006	0.204	0.921699	1.000000	-
Rv1915	aceAa	21	128.76	135.66	138.78	145.25	131.33	125.73	-0.058	0.015	0.046	0.110	-0.031	-0.091	0.982521	1.000000	-
Rv1916	aceAb	17	74.47	85.56	105.01	84.45	81.41	107.46	-0.253	-0.065	0.216	-0.083	-0.133	0.248	0.325834	1.000000	-
Rv1917c	PPE34	121	35.02	33.02	35.05	34.87	32.15	33.81	0.038	-0.036	0.039	0.032	-0.070	-0.007	0.989991	1.000000	-
Rv1918c	PPE35	75	37.58	39.10	36.22	37.00	38.37	45.49	-0.046	0.005	-0.093	-0.066	-0.020	0.200	0.855878	1.000000	-
Rv1919c	-	7	182.79	206.38	213.57	210.83	204.57	214.59	-0.164	0.006	0.055	0.036	-0.006	0.061	0.996606	1.000000	-
Rv1920	-	12	174.46	157.34	175.04	170.85	161.32	163.19	0.061	-0.084	0.066	0.032	-0.049	-0.033	0.995421	1.000000	-
Rv1921c	lppF	22	123.43	107.11	116.81	116.19	123.50	119.51	0.065	-0.131	-0.011	-0.019	0.066	0.020	0.995802	1.000000	-
Rv1922	-	20	81.29	76.00	83.84	85.60	88.85	89.82	-0.048	-0.140	-0.006	0.022	0.073	0.088	0.992952	1.000000	-
Rv1923	lipD	34	145.56	159.81	136.37	148.58	154.91	193.48	-0.101	0.030	-0.192	-0.072	-0.014	0.298	0.283390	1.000000	-
Rv1924c	-	11	203.55	217.61	186.36	199.83	176.08	205.78	0.037	0.132	-0.087	0.012	-0.166	0.053	0.941539	1.000000	-
Rv1925	fadD31	38	129.82	165.08	102.59	169.04	175.14	183.67	-0.240	0.095	-0.566	0.128	0.178	0.245	0.002233	0.049225	-
Rv1926c	mpt63	8	3.54	5.07	3.51	5.24	5.87	8.18	-0.262	-0.023	-0.266	0.000	0.087	0.364	0.729119	1.000000	-
Rv1927	-	17	180.14	183.55	141.90	140.75	151.88	130.12	0.213	0.239	-0.121	-0.132	-0.026	-0.241	0.718180	1.000000	-
Rv1928c	-	18	73.91	87.53	75.79	83.91	75.33	92.58	-0.133	0.097	-0.099	0.039	-0.107	0.174	0.901616	1.000000	-
Rv1929c	-	9	50.51	69.00	51.67	63.97	69.68	54.10	-0.224	0.191	-0.194	0.089	0.204	-0.133	0.850913	1.000000	-
Rv1930c	-	5	32.30	35.85	34.30	29.19	44.37	38.72	-0.129	0.002	-0.054	-0.254	0.275	0.100	0.934447	1.000000	-
Rv1931c	-	5	132.22	124.86	121.68	120.00	102.51	77.58	0.216	0.136	0.101	0.081	-0.136	-0.517	0.690932	1.000000	-
Rv1932	tpx	8	127.19	177.53	161.01	187.86	154.78	162.49	-0.336	0.130	-0.007	0.209	-0.062	0.006	0.508774	1.000000	-
Rv1933c	fadE18	10	159.97	174.77	145.03	154.53	178.22	158.57	-0.016	0.108	-0.153	-0.065	0.135	-0.029	0.963832	1.000000	-
Rv1934c	fadE17	12	135.40	142.10	136.15	154.22	139.93	136.71	-0.054	0.013	-0.046	0.128	-0.008	-0.041	0.984223	1.000000	-
Rv1935c	echA13	10	175.89	187.91	171.23	151.78	155.01	178.02	0.048	0.141	0.010	-0.158	-0.129	0.065	0.933133	1.000000	-
Rv1936	-	17	155.56	157.43	152.26	159.74	160.21	145.97	0.003	0.020	-0.027	0.040	0.044	-0.086	0.998822	1.000000	-
Rv1937	-	48	83.51	77.85	84.62	75.71	85.23	76.67	0.048	-0.047	0.066	-0.085	0.076	-0.068	0.874440	1.000000	-
Rv1938	ephB	17	86.09	71.09	67.27	65.11	76.75	46.10	0.305	0.045	-0.029	-0.073	0.149	-0.529	0.253326	1.000000	-
Rv1939	-	5	82.15	77.51	68.83	68.55	67.13	67.51	0.180	0.101	-0.060	-0.065	-0.093	-0.086	0.981069	1.000000	-
Rv1940	ribA1	9	140.91	139.88	149.92	128.50	152.70	143.63	-0.017	-0.027	0.070	-0.145	0.096	0.010	0.993384	1.000000	-
Rv1941	-	4	130.76	103.51	93.06	115.80	97.66	79.54	0.325	0.002	-0.144	0.156	-0.078	-0.358	0.675762	1.000000	-
Rv1942c	-	2	124.12	163.75	195.87	147.84	128.13	54.08	-0.123	0.263	0.514	0.120	-0.079	-1.251	0.329419	1.000000	-
Rv1943c	-	10	56.39	89.25	85.39	79.13	77.94	85.96	-0.453	0.166	0.106	0.002	-0.018	0.115	0.898473	1.000000	-
Rv1944c	-	8	57.44	49.12	81.57	58.24	51.09	57.53	-0.039	-0.246	0.432	-0.021	-0.194	-0.037	0.315794	1.000000	-
Rv1945	-	21	108.62	103.60	126.99	118.10	111.07	109.59	-0.054	-0.120	0.162	0.061	-0.024	-0.042	0.951567	1.000000	-
Rv1946c	lppG	7	90.93	96.81	79.06	101.49	103.51	119.59	-0.111	-0.025	-0.301	0.040	0.067	0.267	0.873978	1.000000	-
Rv1947	-	5	159.13	204.02	196.57	200.67	190.40	191.59	-0.252	0.097	0.045	0.074	0.000	0.009	0.960335	1.000000	-
Rv1948c	-	17	44.64	50.95	46.22	54.83	46.55	55.96	-0.144	0.028	-0.099	0.125	-0.090	0.152	0.973295	1.000000	-
Rv1949c	-	21	122.54	106.01	106.17	108.26	124.14	92.40	0.150	-0.050	-0.048	-0.021	0.168	-0.239	0.981392	1.000000	-
Rv1950c	-	6	205.14	213.56	200.43	206.67	206.58	174.00	0.028	0.085	-0.004	0.039	0.038	-0.203	0.998097	1.000000	-
Rv1951c	-	5	3.79	2.04	3.79	0.96	2.89	3.24	0.175	-0.145	0.175	-0.385	0.019	0.082	0.948436	1.000000	-
Rv1952	-	2	139.11	104.60	125.35	89.85	95.65	134.98	0.265	-0.130	0.120	-0.338	-0.253	0.223	0.762973	1.000000	-
Rv1953	-	12	86.76	87.45	91.71	82.10	81.80	86.10	0.012	0.023	0.088	-0.063	-0.068	0.002	0.999738	1.000000	-
Rv1954c	-	11	73.99	58.32	48.44	56.87	55.06	76.42	0.248	-0.071	-0.316	-0.105	-0.147	0.292	0.610590	1.000000	-
Rv1955	-	9	68.22	47.58	70.33	71.31	57.76	68.86	0.085	-0.392	0.126	0.145	-0.137	0.098	0.977590	1.000000	-
Rv1956	-	8	132.61	133.97	154.24	97.40	111.76	150.65	0.026	0.041	0.237	-0.400	-0.210	0.204	0.805263	1.000000	-
Rv1957	-	13	188.41	166.06	163.97	96.85	85.35	170.13	0.365	0.188	0.171	-0.560	-0.733	0.222	0.007191	0.137948	-
Rv1958c	-	11	107.25	107.48	117.67	101.55	92.49	119.83	-0.006	-0.003	0.122	-0.081	-0.209	0.147	0.989026	1.000000	-
Rv1959c	-	7	145.74	150.25	183.92	161.82	156.77	167.74	-0.139	-0.097	0.186	0.007	-0.038	0.057	0.998716	1.000000	-
Rv1960c	-	4	179.68	164.88	183.81	160.33	127.00	148.38	0.157	0.036	0.189	-0.003	-0.328	-0.111	0.858383	1.000000	-
Rv1961	-	10	218.03	216.44	208.69	203.34	220.50	253.55	-0.013	-0.024	-0.075	-0.112	0.003	0.200	0.933258	1.000000	-
Rv1962c	-	14	155.27	188.63	160.03	160.58	165.42	179.10	-0.112	0.161	-0.069	-0.065	-0.023	0.088	0.893258	1.000000	-
Rv1963c	mce3R	18	64.46	85.40	86.02	73.38	72.00	83.97	-0.249	0.131	0.141	-0.075	-0.100	0.108	0.817560	1.000000	-
Rv1964	yrbE3A	7	205.18	215.68	227.01	226.34	223.23	241.17	-0.118	-0.048	0.025	0.020	0.001	0.110	0.999178	1.000000	-
Rv1965	yrbE3B	15	189.67	215.08	212.17	198.43	196.29	196.19	-0.084	0.093	0.074	-0.020	-0.036	-0.036	0.995597	1.000000	-
Rv1966	mce3A	15	173.61	171.05	171.46	169.67	159.65	156.88	0.054	0.033	0.036	0.022	-0.063	-0.088	0.997563	1.000000	-
Rv1967	mce3B	13	245.25	291.50	225.81	276.09	216.47	241.18	-0.024	0.221	-0.140	0.144	-0.200	-0.047	0.564841	1.000000	-
Rv1968	mce3C	12	86.27	97.28	97.63	94.34	82.75	91.10	-0.081	0.083	0.088	0.041	-0.138	-0.007	0.994494	1.000000	-
Rv1969	mce3D	13	224.36	164.10	215.22	192.40	212.56	182.74	0.172	-0.268	0.113	-0.044	0.096	-0.117	0.586176	1.000000	-
Rv1970	lprM	10	48.30	64.13	53.04	69.14	67.51	57.71	-0.286	0.090	-0.163	0.190	0.158	-0.051	0.775588	1.000000	-
Rv1971	mce3F	20	146.99	162.71	121.52	178.26	154.46	162.63	-0.069	0.073	-0.334	0.201	0.000	0.072	0.713112	1.000000	-
Rv1972	-	5	160.32	171.21	132.47	138.67	159.95	103.57	0.146	0.238	-0.120	-0.056	0.143	-0.460	0.744238	1.000000	-
Rv1973	-	4	329.76	239.88	253.45	362.44	222.34	222.65	0.275	-0.176	-0.099	0.409	-0.284	-0.282	0.845940	1.000000	-
Rv1974	-	8	157.35	145.04	174.17	151.45	135.44	160.61	0.030	-0.084	0.172	-0.023	-0.179	0.059	0.958741	1.000000	-
Rv1975	-	13	202.98	181.11	170.84	204.01	197.53	209.73	0.061	-0.099	-0.181	0.068	0.023	0.107	0.963179	1.000000	-
Rv1976c	-	3	337.87	235.36	160.39	267.16	235.84	211.44	0.477	-0.035	-0.575	0.144	-0.033	-0.187	0.899154	1.000000	-
Rv1977	-	13	135.83	129.97	119.78	118.68	146.31	131.07	0.058	-0.003	-0.117	-0.129	0.162	0.008	0.907183	1.000000	-
Rv1978	-	14	205.51	199.98	198.98	196.70	189.78	186.49	0.065	0.027	0.020	0.003	-0.047	-0.072	0.999377	1.000000	-
Rv1979c	-	38	136.73	153.38	140.29	124.92	130.16	142.76	-0.013	0.147	0.023	-0.139	-0.082	0.047	0.942382	1.000000	-
Rv1980c	mpt64	19	133.78	135.76	134.61	138.45	127.41	165.77	-0.056	-0.036	-0.048	-0.008	-0.124	0.243	0.800676	1.000000	-
Rv1981c	nrdF	24	184.79	190.70	156.45	176.41	171.64	179.67	0.064	0.108	-0.170	-0.002	-0.040	0.024	0.946080	1.000000	-
Rv1982c	-	5	267.65	287.76	222.74	244.38	256.10	233.68	0.085	0.188	-0.175	-0.044	0.023	-0.107	0.989385	1.000000	-
Rv1983	PE_PGRS35	34	149.60	142.89	133.37	142.41	147.24	143.31	0.062	-0.002	-0.098	-0.007	0.039	0.002	0.994984	1.000000	-
Rv1984c	cfp21	13	127.20	142.89	122.68	138.65	137.96	163.55	-0.122	0.040	-0.172	-0.002	-0.009	0.229	0.897300	1.000000	-
Rv1985c	-	14	184.22	178.22	222.77	213.29	194.38	188.83	-0.094	-0.140	0.174	0.112	-0.018	-0.059	0.877424	1.000000	-
Rv1986	-	8	199.75	290.05	224.20	248.72	215.20	158.74	-0.154	0.373	0.009	0.156	-0.049	-0.476	0.474830	1.000000	-
Rv1987	-	9	166.67	146.99	136.16	129.05	141.58	143.30	0.205	0.029	-0.078	-0.152	-0.023	-0.006	0.977779	1.000000	-
Rv1988	-	6	193.52	132.87	133.90	146.47	134.74	171.13	0.338	-0.188	-0.178	-0.053	-0.169	0.165	0.886521	1.000000	-
Rv1989c	-	11	218.38	226.16	201.56	223.38	186.51	225.06	0.032	0.081	-0.081	0.064	-0.190	0.074	0.959504	1.000000	-
Rv1990c	-	6	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv1990A	-	4	156.31	188.34	210.31	192.31	247.22	193.91	-0.332	-0.071	0.084	-0.041	0.313	-0.030	0.904453	1.000000	-
Rv1991c	-	6	208.68	238.69	214.08	238.51	193.14	238.10	-0.086	0.103	-0.050	0.102	-0.195	0.100	0.966696	1.000000	-
Rv1992c	ctpG	34	223.90	212.12	218.40	202.33	221.76	210.39	0.058	-0.018	0.023	-0.084	0.045	-0.029	0.976153	1.000000	-
Rv1993c	-	5	200.43	187.83	196.80	208.89	184.62	227.07	-0.004	-0.095	-0.029	0.055	-0.119	0.172	0.997989	1.000000	-
Rv1994c	-	8	194.60	170.77	214.76	158.15	172.22	163.94	0.117	-0.067	0.256	-0.174	-0.055	-0.124	0.977941	1.000000	-
Rv1995	-	8	407.23	396.49	435.67	456.70	414.60	415.01	-0.047	-0.085	0.049	0.116	-0.022	-0.020	0.997339	1.000000	-
Rv1996	-	13	256.43	251.37	201.02	228.11	202.22	250.10	0.144	0.116	-0.199	-0.021	-0.191	0.109	0.872534	1.000000	-
Rv1997	ctpF	29	120.59	124.96	125.43	114.30	119.60	114.30	0.008	0.058	0.063	-0.066	-0.003	-0.066	0.993928	1.000000	-
Rv1998c	-	19	55.45	67.60	66.88	69.60	63.57	57.68	-0.180	0.085	0.070	0.124	0.002	-0.127	0.957295	1.000000	-
Rv1999c	-	26	200.96	190.54	181.71	192.51	175.62	157.27	0.131	0.056	-0.011	0.070	-0.059	-0.213	0.984984	1.000000	-
Rv2000	-	35	100.45	110.75	104.20	96.63	100.90	111.78	-0.049	0.085	0.001	-0.102	-0.043	0.098	0.883370	1.000000	-
Rv2001	-	15	109.96	107.00	99.62	109.67	97.99	82.62	0.115	0.077	-0.021	0.111	-0.043	-0.277	0.853673	1.000000	-
Rv2002	fabG3	10	80.83	67.38	76.22	95.19	94.33	80.72	-0.027	-0.273	-0.107	0.196	0.184	-0.029	0.832253	1.000000	-
Rv2003c	-	13	48.75	70.25	53.37	43.97	53.36	48.72	-0.112	0.374	0.008	-0.246	0.007	-0.112	0.718207	1.000000	-
Rv2004c	-	25	77.60	65.22	67.87	66.52	66.18	57.25	0.203	-0.032	0.022	-0.005	-0.012	-0.205	0.886808	1.000000	-
Rv2005c	-	13	43.21	40.58	45.71	30.65	45.94	51.43	0.009	-0.072	0.082	-0.427	0.088	0.236	0.749763	1.000000	-
Rv2006	otsB1	82	65.73	44.86	57.50	52.74	49.95	50.26	0.274	-0.231	0.095	-0.019	-0.091	-0.082	0.073664	0.854413	-
Rv2007c	fdxA	8	58.92	45.96	39.44	38.28	48.49	41.21	0.343	0.016	-0.181	-0.219	0.086	-0.125	0.763706	1.000000	-
Rv2008c	-	29	55.59	49.21	58.61	58.44	47.40	58.27	0.024	-0.137	0.094	0.090	-0.186	0.087	0.911301	1.000000	-
Rv2009	-	4	81.75	80.05	87.60	102.85	99.95	71.93	-0.090	-0.119	0.004	0.224	0.184	-0.264	0.995434	1.000000	-
Rv2010	-	7	211.25	215.91	214.97	184.79	173.59	174.11	0.107	0.138	0.132	-0.081	-0.169	-0.165	0.985101	1.000000	-
Rv2011c	-	6	217.56	133.91	178.17	181.03	176.28	152.56	0.320	-0.360	0.039	0.062	0.024	-0.178	0.764132	1.000000	-
Rv2012	-	11	167.36	163.87	144.56	151.59	162.48	161.52	0.076	0.046	-0.129	-0.063	0.034	0.026	0.986365	1.000000	-
Rv2013	-	3	116.23	161.58	213.51	198.04	161.45	108.57	-0.444	0.015	0.406	0.300	0.014	-0.538	0.773016	1.000000	-
Rv2014	-	4	246.00	192.47	280.83	279.25	306.72	226.45	-0.052	-0.398	0.135	0.127	0.260	-0.169	0.946274	1.000000	-
Rv2015c	-	11	103.37	99.89	101.61	99.68	106.38	87.93	0.048	0.001	0.025	-0.002	0.088	-0.174	0.954985	1.000000	-
Rv2016	-	7	74.42	76.51	70.12	56.57	67.38	71.76	0.093	0.130	0.013	-0.274	-0.041	0.044	0.995715	1.000000	-
Rv2017	-	12	0.00	0.42	0.00	0.00	0.00	0.00	-0.020	0.096	-0.020	-0.020	-0.020	-0.020	0.307973	1.000000	-
Rv2018	-	14	17.46	21.41	18.06	26.60	30.55	25.73	-0.333	-0.100	-0.295	0.159	0.329	0.119	0.314226	1.000000	-
Rv2019	-	6	126.42	141.74	140.79	128.73	112.33	136.56	-0.050	0.109	0.099	-0.025	-0.214	0.057	0.929984	1.000000	-
Rv2020c	-	4	202.39	181.97	190.83	223.30	203.53	174.52	0.045	-0.105	-0.038	0.183	0.052	-0.164	0.987279	1.000000	-
Rv2021c	-	6	265.87	248.27	225.75	262.32	261.09	243.37	0.081	-0.016	-0.150	0.062	0.055	-0.044	0.998572	1.000000	-
Rv2022c	-	13	242.72	218.58	217.92	244.30	263.22	259.81	0.010	-0.138	-0.143	0.019	0.124	0.106	0.874675	1.000000	-
Rv2023c	-	2	55.34	58.92	63.95	62.65	68.55	77.25	-0.203	-0.119	-0.010	-0.038	0.083	0.244	0.670886	1.000000	-
Rv2024c	-	15	149.63	158.54	133.85	151.79	144.52	155.57	0.006	0.087	-0.149	0.026	-0.042	0.060	0.990546	1.000000	-
Rv2025c	-	11	115.28	139.57	151.60	120.51	121.47	134.41	-0.172	0.094	0.209	-0.110	-0.099	0.041	0.977208	1.000000	-
Rv2026c	-	11	58.10	47.94	68.34	49.88	41.18	39.73	0.176	-0.077	0.393	-0.026	-0.275	-0.321	0.484916	1.000000	-
Rv2027c	-	15	188.77	211.71	179.00	198.47	198.16	173.73	-0.021	0.140	-0.096	0.049	0.047	-0.138	0.947210	1.000000	-
Rv2028c	-	13	126.03	109.75	111.43	114.49	111.29	96.41	0.169	-0.023	-0.002	0.036	-0.003	-0.201	0.994324	1.000000	-
Rv2029c	pfkB	11	62.35	66.79	92.38	91.90	69.05	84.70	-0.299	-0.207	0.233	0.226	-0.162	0.114	0.453311	1.000000	-
Rv2030c	-	34	139.11	120.68	125.90	124.14	125.99	120.84	0.136	-0.061	-0.002	-0.022	-0.001	-0.059	0.957367	1.000000	-
Rv2031c	hspX	8	103.64	116.23	84.60	104.07	91.34	81.27	0.093	0.251	-0.185	0.099	-0.080	-0.240	0.979181	1.000000	-
Rv2032	acg	18	84.85	95.43	105.90	112.13	76.81	84.18	-0.128	0.032	0.175	0.254	-0.264	-0.139	0.545969	1.000000	-
Rv2033c	-	11	208.52	180.48	190.53	178.81	168.74	190.68	0.159	-0.045	0.032	-0.058	-0.139	0.033	0.984524	1.000000	-
Rv2034	-	3	93.27	52.67	115.68	56.36	74.53	49.95	0.320	-0.449	0.616	-0.360	0.014	-0.519	0.648538	1.000000	-
Rv2035	-	12	107.36	109.56	85.98	90.36	98.05	102.22	0.113	0.141	-0.192	-0.124	-0.012	0.045	0.925097	1.000000	-
Rv2036	-	9	65.63	69.12	58.23	58.55	65.97	54.92	0.075	0.144	-0.085	-0.078	0.081	-0.163	0.991426	1.000000	-
Rv2037c	-	16	69.60	65.46	80.68	69.44	55.93	56.76	0.065	-0.017	0.265	0.062	-0.227	-0.207	0.659971	1.000000	-
Rv2038c	-	17	47.74	40.47	35.82	30.07	27.96	34.74	0.359	0.145	-0.011	-0.230	-0.320	-0.050	0.521026	1.000000	-
Rv2039c	-	16	37.40	45.23	58.77	35.17	36.66	41.27	-0.161	0.083	0.428	-0.239	-0.187	-0.035	0.361157	1.000000	-
Rv2040c	-	18	52.53	52.44	43.20	32.15	43.14	44.03	0.215	0.212	-0.041	-0.416	-0.043	-0.016	0.905667	1.000000	-
Rv2041c	-	25	67.28	53.90	50.44	57.80	48.70	56.13	0.252	-0.044	-0.131	0.049	-0.177	0.010	0.557337	1.000000	-
Rv2042c	-	15	100.10	81.02	78.99	67.10	95.65	110.87	0.162	-0.127	-0.162	-0.382	0.099	0.302	0.254517	1.000000	-
Rv2043c	pncA	12	143.82	105.09	117.08	109.19	112.53	101.65	0.312	-0.123	0.026	-0.070	-0.029	-0.169	0.731148	1.000000	-
Rv2044c	-	7	72.88	106.93	103.64	68.14	75.62	82.19	-0.207	0.316	0.273	-0.298	-0.157	-0.044	0.125455	1.000000	-
Rv2045c	lipT	29	139.29	101.17	137.46	129.46	117.90	105.47	0.187	-0.256	0.168	0.085	-0.045	-0.199	0.462664	1.000000	-
Rv2046	lppI	10	313.72	262.62	271.94	216.32	208.30	286.20	0.267	0.015	0.064	-0.259	-0.312	0.137	0.393427	1.000000	-
Rv2047c	-	32	0.24	0.47	25.81	86.97	81.38	0.95	-2.846	-2.781	-0.289	1.289	1.199	-2.662	0.000000	0.000000	-
Rv2048c	pks12	147	2.94	12.54	17.17	50.52	50.30	6.54	-1.836	-0.692	-0.354	0.970	0.965	-1.296	0.000000	0.000000	-
Rv2049c	-	1	382.25	77.05	115.85	284.17	111.90	394.17	0.736	-1.503	-0.944	0.314	-0.992	0.779	1.000000	1.000000	TA sites <= 1
Rv2050	-	5	0.77	2.04	2.52	0.00	4.69	2.17	-0.285	0.002	0.097	-0.492	0.463	0.028	0.492301	1.000000	-
Rv2051c	ppm1	33	119.44	109.53	118.03	85.20	133.30	92.16	0.119	-0.001	0.102	-0.346	0.271	-0.238	0.515448	1.000000	-
Rv2052c	-	21	284.17	263.99	260.73	275.07	239.34	225.26	0.136	0.032	0.014	0.090	-0.107	-0.192	0.868844	1.000000	-
Rv2053c	fxsA	4	133.66	169.41	142.37	137.50	145.73	203.10	-0.209	0.122	-0.121	-0.170	-0.089	0.377	0.879370	1.000000	-
Rv2054	-	16	168.47	155.28	186.56	179.83	195.01	189.70	-0.086	-0.200	0.057	0.005	0.119	0.080	0.884867	1.000000	-
Rv2055c	rpsR	3	67.84	42.62	73.05	82.39	84.55	67.79	-0.037	-0.650	0.063	0.226	0.262	-0.038	0.775702	1.000000	-
Rv2056c	rpsN	3	103.77	93.20	117.75	99.67	97.75	121.12	-0.023	-0.171	0.151	-0.079	-0.105	0.190	0.986760	1.000000	-
Rv2057c	rpmG	4	342.04	340.28	344.19	365.16	327.77	307.69	0.018	0.010	0.026	0.111	-0.043	-0.133	0.998558	1.000000	-
Rv2058c	rpmB	5	159.05	159.13	132.15	126.58	143.37	142.72	0.140	0.141	-0.118	-0.178	-0.004	-0.011	0.980706	1.000000	-
Rv2059	-	20	109.28	113.96	104.86	104.41	116.91	119.07	-0.027	0.031	-0.084	-0.090	0.066	0.092	0.977897	1.000000	-
Rv2060	-	3	123.32	99.93	108.20	102.02	147.68	133.06	0.049	-0.241	-0.132	-0.213	0.300	0.154	0.857179	1.000000	-
Rv2061c	-	6	162.52	228.49	201.20	175.58	157.47	192.36	-0.191	0.288	0.108	-0.083	-0.235	0.045	0.720245	1.000000	-
Rv2062c	cobN	50	129.57	102.66	128.67	113.86	106.55	115.52	0.152	-0.170	0.142	-0.027	-0.119	-0.007	0.535202	1.000000	-
Rv2063	-	3	29.96	28.78	14.72	21.88	48.12	46.55	-0.069	-0.118	-0.895	-0.448	0.535	0.492	0.021661	0.332410	-
Rv2064	cobG	9	36.99	31.61	39.13	36.82	44.27	31.05	0.012	-0.186	0.084	0.006	0.243	-0.208	0.985814	1.000000	-
Rv2065	cobH	8	187.38	189.42	195.61	213.61	207.41	195.44	-0.079	-0.063	-0.018	0.106	0.064	-0.019	0.997082	1.000000	-
Rv2066	cobI	22	288.56	271.32	265.55	276.36	236.12	256.84	0.116	0.029	-0.001	0.055	-0.167	-0.049	0.977721	1.000000	-
Rv2067c	-	34	95.13	105.19	96.29	101.59	82.55	98.08	-0.019	0.119	-0.003	0.071	-0.213	0.023	0.977540	1.000000	-
Rv2068c	blaC	14	224.05	205.00	232.94	242.56	207.49	210.72	0.023	-0.102	0.078	0.135	-0.085	-0.064	0.998504	1.000000	-
Rv2069	sigC	8	206.37	187.18	170.59	181.83	206.37	177.01	0.129	-0.008	-0.138	-0.049	0.129	-0.086	0.974894	1.000000	-
Rv2070c	cobK	16	117.26	111.45	119.31	116.57	102.71	122.30	0.028	-0.043	0.052	0.020	-0.155	0.086	0.994644	1.000000	-
Rv2071c	cobM	17	162.15	194.03	195.21	211.39	182.50	174.91	-0.198	0.054	0.063	0.175	-0.032	-0.092	0.753030	1.000000	-
Rv2072c	cobL	13	104.96	98.20	128.46	130.85	111.84	93.21	-0.080	-0.172	0.199	0.225	0.007	-0.243	0.658117	1.000000	-
Rv2073c	-	10	181.04	168.47	172.37	179.01	204.37	139.59	0.054	-0.046	-0.014	0.039	0.225	-0.309	0.932037	1.000000	-
Rv2074	-	6	211.84	177.60	210.83	200.48	171.45	174.61	0.145	-0.103	0.138	0.067	-0.153	-0.127	0.932651	1.000000	-
Rv2075c	-	26	286.83	258.11	288.25	254.61	250.65	270.72	0.095	-0.054	0.102	-0.074	-0.096	0.013	0.957119	1.000000	-
Rv2076c	-	5	47.24	48.82	51.28	52.27	58.84	54.04	-0.128	-0.085	-0.020	0.005	0.161	0.049	0.991301	1.000000	-
Rv2077c	-	19	259.57	213.60	256.24	216.60	212.67	236.50	0.156	-0.120	0.137	-0.100	-0.126	0.024	0.875148	1.000000	-
Rv2077A	-	7	91.86	64.97	94.47	73.88	98.39	116.76	0.027	-0.442	0.065	-0.269	0.121	0.357	0.559053	1.000000	-
Rv2078	-	3	99.27	67.77	81.25	62.47	80.92	83.10	0.310	-0.209	0.036	-0.318	0.030	0.067	0.906573	1.000000	-
Rv2079	-	34	118.77	98.24	107.05	107.49	103.64	99.30	0.160	-0.101	0.017	0.022	-0.028	-0.086	0.986990	1.000000	-
Rv2080	lppJ	10	21.40	35.29	31.31	25.49	25.72	32.74	-0.350	0.259	0.110	-0.143	-0.132	0.165	0.817148	1.000000	-
Rv2081c	-	7	204.50	171.91	203.75	180.49	169.49	183.67	0.136	-0.108	0.131	-0.039	-0.128	-0.015	0.998475	1.000000	-
Rv2082	-	38	120.43	110.58	118.11	114.21	113.88	111.38	0.067	-0.051	0.040	-0.007	-0.011	-0.041	0.999442	1.000000	-
Rv2083	-	6	309.28	262.02	242.18	284.17	282.96	261.34	0.174	-0.062	-0.173	0.053	0.047	-0.065	0.984685	1.000000	-
Rv2084	-	25	192.46	191.24	192.09	210.53	213.43	193.60	-0.046	-0.055	-0.049	0.080	0.099	-0.038	0.967275	1.000000	-
Rv2085	-	3	94.85	82.88	65.56	94.25	58.62	102.19	0.181	-0.003	-0.320	0.173	-0.469	0.284	0.703386	1.000000	-
Rv2086	-	11	111.19	98.26	149.15	91.61	102.51	155.52	-0.083	-0.253	0.325	-0.349	-0.195	0.384	0.229205	1.000000	-
Rv2087	-	5	7.21	11.15	1.26	7.57	9.74	9.17	-0.055	0.349	-1.019	-0.013	0.217	0.160	0.495690	1.000000	-
Rv2088	pknJ	30	62.28	69.21	70.96	60.13	67.85	58.09	-0.052	0.089	0.123	-0.099	0.063	-0.145	0.940340	1.000000	-
Rv2089c	pepE	21	47.46	49.92	52.84	40.91	48.30	47.76	-0.011	0.055	0.130	-0.203	0.012	-0.003	0.920072	1.000000	-
Rv2090	-	16	120.28	115.90	123.54	99.24	109.90	122.67	0.059	0.008	0.096	-0.206	-0.066	0.086	0.867391	1.000000	-
Rv2091c	-	19	102.45	113.10	95.02	120.80	117.94	105.13	-0.086	0.050	-0.190	0.141	0.108	-0.051	0.877615	1.000000	-
Rv2092c	helY	40	215.10	201.97	210.40	206.66	218.13	207.70	0.034	-0.055	0.003	-0.023	0.054	-0.015	0.994860	1.000000	-
Rv2093c	tatC	12	12.36	6.74	15.86	14.76	17.15	5.00	0.032	-0.532	0.297	0.219	0.384	-0.763	0.833008	1.000000	-
Rv2094c	tatA	2	1.93	2.50	3.15	0.00	0.00	2.35	0.059	0.172	0.292	-0.413	-0.413	0.143	0.781510	1.000000	-
Rv2095c	-	15	286.69	283.02	271.02	269.63	246.53	248.26	0.098	0.080	0.018	0.011	-0.116	-0.106	0.963327	1.000000	-
Rv2096c	-	15	117.48	133.93	122.22	146.24	133.12	147.81	-0.177	0.005	-0.122	0.127	-0.004	0.142	0.928749	1.000000	-
Rv2097c	-	21	41.80	75.54	44.87	61.47	69.13	60.38	-0.448	0.335	-0.357	0.058	0.215	0.034	0.370071	1.000000	-
Rv2100	-	19	264.52	274.43	293.09	263.91	259.69	255.75	-0.021	0.031	0.124	-0.025	-0.048	-0.069	0.998948	1.000000	-
Rv2101	helZ	28	260.08	242.78	251.64	245.32	246.36	234.34	0.074	-0.023	0.028	-0.008	-0.002	-0.073	0.998013	1.000000	-
Rv2102	-	12	166.45	151.94	156.85	138.53	156.42	154.17	0.108	-0.019	0.025	-0.148	0.021	0.001	0.989256	1.000000	-
Rv2103c	-	5	448.89	327.80	325.86	287.78	279.80	255.32	0.478	0.030	0.022	-0.155	-0.195	-0.324	0.625766	1.000000	-
Rv2104c	-	1	97.44	82.50	84.30	106.87	110.90	115.45	-0.030	-0.257	-0.228	0.097	0.148	0.204	1.000000	1.000000	TA sites <= 1
Rv2105	-	4	196.21	237.22	210.03	237.33	235.32	182.92	-0.139	0.129	-0.043	0.130	0.118	-0.237	0.892318	1.000000	-
Rv2106	-	25	290.69	300.26	334.59	317.14	290.15	304.51	-0.074	-0.028	0.126	0.050	-0.076	-0.008	0.937937	1.000000	-
Rv2107	PE22	9	15.43	21.58	17.78	22.20	26.77	37.51	-0.482	-0.103	-0.326	-0.069	0.154	0.575	0.013617	0.232190	-
Rv2108	PPE36	21	119.35	115.40	114.25	111.19	94.74	109.95	0.103	0.056	0.042	0.005	-0.216	-0.011	0.953830	1.000000	-
Rv2109c	prcA	18	17.27	32.71	12.11	15.24	22.26	19.46	-0.158	0.602	-0.538	-0.295	0.134	-0.022	0.012311	0.214508	-
Rv2110c	prcB	18	7.83	19.21	11.63	9.12	23.62	14.92	-0.595	0.320	-0.221	-0.458	0.562	0.039	0.002199	0.048746	-
Rv2111c	-	1	0.00	35.80	0.00	9.73	20.75	19.50	-1.948	1.080	-1.948	-0.389	0.416	0.344	1.000000	1.000000	TA sites <= 1
Rv2112c	-	32	39.18	67.40	47.87	51.68	64.62	59.43	-0.442	0.270	-0.183	-0.083	0.214	0.102	0.006307	0.122151	-
Rv2113	-	11	127.35	140.39	152.05	138.85	173.09	124.78	-0.159	-0.023	0.088	-0.039	0.269	-0.187	0.835668	1.000000	-
Rv2114	-	14	151.35	140.78	152.41	128.27	141.73	158.40	0.055	-0.046	0.065	-0.175	-0.037	0.119	0.929967	1.000000	-
Rv2115c	-	29	29.48	46.99	27.73	49.36	52.40	45.52	-0.444	0.148	-0.519	0.213	0.291	0.107	0.000013	0.000442	-
Rv2116	lppK	6	91.43	104.10	75.80	117.20	124.60	93.10	-0.137	0.041	-0.392	0.205	0.289	-0.112	0.887636	1.000000	-
Rv2117	-	2	121.84	61.07	134.47	123.55	125.40	135.71	0.056	-0.885	0.193	0.075	0.096	0.206	0.203636	1.000000	-
Rv2118c	-	14	189.38	188.52	202.31	182.64	188.23	190.31	-0.006	-0.013	0.087	-0.057	-0.015	0.001	0.995363	1.000000	-
Rv2119	-	20	176.82	183.69	169.94	176.48	170.66	159.18	0.032	0.086	-0.023	0.030	-0.017	-0.115	0.979871	1.000000	-
Rv2120c	-	8	187.21	203.67	182.45	219.25	179.21	161.18	-0.012	0.106	-0.048	0.210	-0.073	-0.222	0.995485	1.000000	-
Rv2121c	hisG	9	0.43	0.00	0.00	0.55	0.81	0.00	0.036	-0.083	-0.083	0.067	0.132	-0.083	0.766732	1.000000	-
Rv2122c	hisE	3	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv2123	PPE37	22	136.67	143.86	151.22	3.00	3.73	150.77	0.457	0.528	0.598	-3.689	-3.563	0.594	0.000000	0.000001	-
Rv2124c	metH	44	111.70	116.94	112.13	119.65	111.05	122.60	-0.048	0.015	-0.043	0.047	-0.056	0.080	0.960639	1.000000	-
Rv2125	-	10	169.69	149.71	159.98	158.74	164.36	148.50	0.096	-0.080	0.013	0.002	0.051	-0.091	0.998646	1.000000	-
Rv2126c	PE_PGRS37	6	306.34	291.93	339.17	226.81	243.58	213.39	0.178	0.110	0.323	-0.248	-0.147	-0.334	0.912151	1.000000	-
Rv2127	ansP1	26	128.74	106.13	121.21	69.74	75.06	97.45	0.353	0.086	0.269	-0.487	-0.387	-0.032	0.111790	1.000000	-
Rv2128	-	6	33.22	31.30	23.42	24.45	21.52	37.02	0.191	0.116	-0.237	-0.185	-0.337	0.327	0.594074	1.000000	-
Rv2129c	-	13	234.45	226.91	246.93	212.18	180.06	171.93	0.142	0.095	0.215	0.001	-0.230	-0.295	0.863146	1.000000	-
Rv2130c	cysS	24	29.82	26.85	35.87	11.43	26.24	19.52	0.217	0.088	0.448	-0.867	0.061	-0.289	0.000027	0.000929	-
Rv2131c	cysQ	9	108.10	160.22	71.47	169.01	163.93	127.46	-0.291	0.256	-0.855	0.331	0.288	-0.063	0.104792	1.000000	-
Rv2132	-	2	148.36	144.35	199.54	117.82	197.25	187.81	-0.156	-0.194	0.260	-0.476	0.243	0.174	0.560017	1.000000	-
Rv2133c	-	9	206.72	196.44	204.54	137.97	138.67	197.80	0.192	0.120	0.177	-0.375	-0.368	0.130	0.439403	1.000000	-
Rv2134c	-	8	123.63	146.31	136.00	118.87	121.70	165.56	-0.126	0.109	0.007	-0.180	-0.148	0.281	0.862516	1.000000	-
Rv2135c	-	5	94.51	87.49	76.85	96.42	139.35	113.76	-0.097	-0.202	-0.378	-0.069	0.440	0.159	0.207175	1.000000	-
Rv2136c	uppP	14	101.30	114.35	106.94	98.05	115.50	123.07	-0.112	0.055	-0.037	-0.157	0.069	0.157	0.988228	1.000000	-
Rv2137c	-	6	131.31	102.80	121.38	132.09	104.66	112.11	0.155	-0.183	0.046	0.164	-0.158	-0.064	0.921607	1.000000	-
Rv2138	lppL	20	25.41	38.06	23.71	28.88	40.12	32.78	-0.263	0.239	-0.346	-0.107	0.306	0.050	0.489780	1.000000	-
Rv2139	pyrD	13	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv2140c	TB18.6	11	135.54	163.81	126.25	158.70	125.71	172.05	-0.113	0.151	-0.212	0.107	-0.218	0.220	0.922997	1.000000	-
Rv2141c	-	21	147.00	127.41	133.36	135.11	122.69	131.74	0.141	-0.058	0.005	0.023	-0.111	-0.012	0.983057	1.000000	-
Rv2142c	-	13	276.57	205.07	241.13	237.74	219.89	249.68	0.210	-0.212	0.016	-0.004	-0.114	0.066	0.957996	1.000000	-
Rv2143	-	14	273.83	258.41	278.70	270.53	257.13	266.49	0.033	-0.049	0.058	0.016	-0.056	-0.005	0.999640	1.000000	-
Rv2144c	-	4	100.96	141.35	121.16	122.84	179.05	136.14	-0.387	0.079	-0.136	-0.116	0.409	0.026	0.675527	1.000000	-
Rv2145c	wag31	11	0.00	0.90	1.41	0.00	0.41	1.41	-0.186	0.054	0.172	-0.186	-0.073	0.173	0.502177	1.000000	-
Rv2146c	-	1	255.78	378.49	275.24	264.87	295.95	303.96	-0.206	0.351	-0.102	-0.156	0.001	0.039	1.000000	1.000000	TA sites <= 1
Rv2147c	-	19	43.91	41.46	40.11	31.68	29.52	32.62	0.235	0.161	0.119	-0.180	-0.267	-0.143	0.987943	1.000000	-
Rv2148c	-	9	119.06	112.38	106.10	101.16	106.54	104.30	0.131	0.052	-0.028	-0.093	-0.022	-0.051	0.999312	1.000000	-
Rv2149c	yfiH	7	184.94	147.43	197.84	186.39	188.32	194.96	0.012	-0.305	0.107	0.023	0.038	0.087	0.904256	1.000000	-
Rv2150c	ftsZ	8	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv2151c	ftsQ	7	29.76	45.17	56.86	34.92	36.36	43.12	-0.405	0.124	0.426	-0.206	-0.154	0.064	0.948118	1.000000	-
Rv2152c	murC	14	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv2153c	murG	14	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv2154c	ftsW	18	57.34	39.56	52.72	52.19	48.59	51.09	0.174	-0.310	0.063	0.050	-0.044	0.022	0.998822	1.000000	-
Rv2155c	murD	20	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv2156c	mraY	12	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv2157c	murF	10	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv2158c	murE	11	1.37	0.47	0.00	0.00	0.00	0.00	0.263	0.044	-0.086	-0.086	-0.086	-0.086	0.266135	1.000000	-
Rv2159c	-	6	228.24	259.53	240.82	208.16	193.29	216.93	0.023	0.205	0.099	-0.107	-0.211	-0.048	0.728407	1.000000	-
Rv2160A	-	6	165.28	164.37	171.85	123.84	174.72	161.06	0.044	0.036	0.098	-0.358	0.122	0.008	0.875092	1.000000	-
Rv2160c	-	3	144.88	154.63	152.15	122.97	187.99	169.49	-0.097	-0.006	-0.029	-0.325	0.267	0.122	0.921724	1.000000	-
Rv2161c	-	8	300.35	270.37	281.37	221.76	212.56	268.72	0.209	0.060	0.116	-0.220	-0.280	0.051	0.547257	1.000000	-
Rv2162c	PE_PGRS38	14	214.90	188.47	197.43	197.35	190.66	179.34	0.139	-0.046	0.020	0.019	-0.029	-0.115	0.972115	1.000000	-
Rv2163c	pbpB	29	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv2164c	-	10	6.75	7.66	3.44	9.34	8.84	6.81	-0.047	0.060	-0.524	0.240	0.189	-0.040	0.940283	1.000000	-
Rv2165c	mraW	19	23.22	33.75	30.94	29.61	33.61	21.00	-0.255	0.202	0.093	0.039	0.197	-0.374	0.479539	1.000000	-
Rv2166c	-	8	5.90	17.79	13.26	11.81	12.52	14.02	-0.687	0.377	0.057	-0.062	-0.003	0.116	0.682907	1.000000	-
Rv2167c	-	26	281.53	292.95	311.89	302.41	303.21	302.55	-0.086	-0.029	0.059	0.016	0.019	0.016	0.988767	1.000000	-
Rv2168c	-	4	193.56	230.71	214.34	261.81	212.98	147.22	-0.115	0.132	0.028	0.311	0.019	-0.499	0.492614	1.000000	-
Rv2169c	-	5	7.48	25.24	12.50	41.37	64.43	23.36	-1.449	-0.172	-0.961	0.445	1.027	-0.264	0.002459	0.053327	-
Rv2170	-	14	174.41	158.11	165.61	132.33	128.02	130.69	0.228	0.091	0.155	-0.158	-0.204	-0.175	0.615623	1.000000	-
Rv2171	lppM	8	97.62	93.47	101.13	93.70	91.03	84.22	0.059	-0.001	0.107	0.002	-0.037	-0.143	0.998193	1.000000	-
Rv2172c	-	17	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv2173	idsA2	18	49.76	30.97	49.95	48.76	57.49	33.68	0.128	-0.478	0.133	0.102	0.319	-0.373	0.351439	1.000000	-
Rv2174	-	27	22.38	18.65	17.01	21.62	21.25	17.91	0.143	-0.069	-0.172	0.102	0.082	-0.115	0.997984	1.000000	-
Rv2175c	-	7	146.10	162.97	174.49	173.03	155.60	168.64	-0.157	-0.004	0.091	0.080	-0.069	0.044	0.982257	1.000000	-
Rv2176	pknL	23	97.39	77.06	77.22	87.11	88.22	91.53	0.163	-0.156	-0.153	0.011	0.028	0.078	0.892424	1.000000	-
Rv2177c	-	7	203.50	162.73	202.01	217.04	179.54	193.54	0.074	-0.240	0.064	0.165	-0.102	0.004	0.974983	1.000000	-
Rv2178c	aroG	16	0.00	0.31	0.00	0.31	0.00	0.00	-0.030	0.058	-0.030	0.057	-0.030	-0.030	0.629897	1.000000	-
Rv2179c	-	7	11.71	19.54	41.96	81.64	81.88	10.99	-1.470	-0.915	0.021	0.904	0.908	-1.534	0.000000	0.000000	-
Rv2180c	-	11	226.51	186.71	199.30	225.98	198.90	187.58	0.146	-0.126	-0.034	0.143	-0.037	-0.119	0.997424	1.000000	-
Rv2181	-	20	156.04	143.62	160.70	176.77	167.40	127.53	0.006	-0.110	0.047	0.181	0.105	-0.275	0.891883	1.000000	-
Rv2182c	-	21	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv2183c	-	6	80.02	82.19	87.36	96.77	69.35	86.96	-0.062	-0.026	0.057	0.197	-0.256	0.051	0.936768	1.000000	-
Rv2184c	-	18	127.59	138.15	119.98	140.26	128.72	115.89	-0.009	0.101	-0.094	0.123	0.003	-0.142	0.937799	1.000000	-
Rv2185c	TB16.3	13	69.80	95.99	57.60	83.09	83.02	81.53	-0.159	0.274	-0.416	0.077	0.076	0.051	0.537268	1.000000	-
Rv2186c	-	9	0.61	1.13	0.70	0.55	0.81	1.64	-0.075	0.054	-0.051	-0.090	-0.025	0.170	0.892551	1.000000	-
Rv2187	fadD15	34	140.70	120.81	126.50	123.99	116.69	134.65	0.140	-0.072	-0.008	-0.036	-0.120	0.079	0.820508	1.000000	-
Rv2188c	-	19	0.00	0.00	0.33	0.00	0.00	0.00	-0.016	-0.016	0.077	-0.016	-0.016	-0.016	0.307323	1.000000	-
Rv2189c	-	11	95.43	104.91	106.65	64.00	87.31	75.88	0.095	0.225	0.248	-0.446	-0.027	-0.217	0.770354	1.000000	-
Rv2190c	-	20	105.80	117.14	84.07	103.94	100.15	94.59	0.065	0.205	-0.250	0.040	-0.011	-0.089	0.662581	1.000000	-
Rv2191	-	26	255.51	257.76	263.03	243.52	223.87	215.68	0.070	0.082	0.111	0.002	-0.117	-0.170	0.935570	1.000000	-
Rv2192c	trpD	7	0.00	0.71	0.90	0.00	0.00	0.00	-0.076	0.117	0.163	-0.076	-0.076	-0.076	0.412744	1.000000	-
Rv2193	ctaE	17	6.30	5.11	5.16	1.68	2.17	4.21	0.312	0.150	0.158	-0.446	-0.344	0.016	0.084099	0.934693	-
Rv2194	qcrC	12	3.48	5.96	5.73	1.54	0.75	3.50	-0.003	0.368	0.338	-0.377	-0.563	0.000	0.081665	0.916326	-
Rv2195	qcrA	22	11.63	10.12	10.11	5.69	5.01	14.28	0.200	0.063	0.062	-0.437	-0.532	0.414	0.848912	1.000000	-
Rv2196	qcrB	30	11.42	10.35	9.98	7.59	6.44	11.07	0.182	0.085	0.049	-0.202	-0.340	0.151	0.929359	1.000000	-
Rv2197c	-	12	159.66	133.95	170.27	126.23	148.99	115.34	0.160	-0.085	0.250	-0.168	0.063	-0.293	0.689702	1.000000	-
Rv2198c	mmpS3	14	13.93	29.88	27.20	37.83	58.70	12.66	-0.888	-0.006	-0.122	0.290	0.863	-0.988	0.000000	0.000001	-
Rv2199c	-	8	52.37	52.89	61.00	60.61	42.76	56.40	-0.049	-0.036	0.153	0.145	-0.313	0.049	0.996899	1.000000	-
Rv2200c	ctaC	20	6.44	2.05	3.16	3.08	2.93	3.85	0.414	-0.284	-0.074	-0.088	-0.114	0.044	0.622016	1.000000	-
Rv2201	asnB	29	0.13	0.00	0.00	0.00	0.00	0.16	0.024	-0.014	-0.014	-0.014	-0.014	0.032	0.607284	1.000000	-
Rv2202c	cbhK	19	8.55	17.68	11.20	26.23	46.17	12.08	-0.902	-0.159	-0.644	0.303	1.015	-0.568	0.000000	0.000000	-
Rv2203	-	14	232.64	247.43	249.86	277.06	257.29	214.36	-0.081	0.006	0.019	0.166	0.061	-0.197	0.898363	1.000000	-
Rv2204c	-	4	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv2205c	-	13	96.59	96.09	99.25	107.67	106.70	93.92	-0.048	-0.055	-0.011	0.101	0.089	-0.087	0.991791	1.000000	-
Rv2206	-	9	128.43	93.60	87.56	105.60	90.59	103.04	0.326	-0.111	-0.202	0.055	-0.156	0.021	0.350044	1.000000	-
Rv2207	cobT	8	157.52	146.71	154.25	102.00	96.34	107.51	0.296	0.197	0.267	-0.307	-0.386	-0.235	0.058362	0.718719	-
Rv2208	cobS	9	96.42	78.01	107.30	75.37	99.85	102.98	0.045	-0.244	0.192	-0.291	0.093	0.135	0.860311	1.000000	-
Rv2209	-	25	221.47	233.95	242.84	218.53	226.29	230.20	-0.046	0.031	0.084	-0.065	-0.016	0.008	0.984148	1.000000	-
Rv2210c	ilvE	22	14.20	12.60	10.22	6.91	1.35	20.77	0.262	0.136	-0.073	-0.426	-1.333	0.687	0.000001	0.000024	-
Rv2211c	gcvT	18	12.37	24.37	8.16	34.78	33.06	21.85	-0.660	0.099	-1.060	0.536	0.473	-0.031	0.000256	0.007036	-
Rv2212	-	10	209.00	170.01	169.17	202.21	223.78	169.41	0.130	-0.160	-0.167	0.083	0.226	-0.165	0.937285	1.000000	-
Rv2213	pepB	15	193.76	192.85	225.75	213.06	206.56	186.46	-0.066	-0.073	0.149	0.068	0.024	-0.120	0.956013	1.000000	-
Rv2214c	ephD	31	124.78	105.69	141.05	112.12	132.43	83.16	0.095	-0.135	0.265	-0.053	0.177	-0.463	0.154312	1.000000	-
Rv2215	dlaT	15	12.94	9.23	8.99	7.38	8.66	9.35	0.315	-0.020	-0.045	-0.221	-0.079	-0.007	0.974565	1.000000	-
Rv2216	-	12	353.69	279.03	295.04	288.43	274.76	299.09	0.242	-0.095	-0.016	-0.048	-0.117	0.004	0.994064	1.000000	-
Rv2217	lipB	12	69.35	90.84	77.14	50.06	35.03	72.84	0.069	0.435	0.213	-0.364	-0.824	0.135	0.724448	1.000000	-
Rv2218	lipA	14	6.30	12.37	8.27	7.44	8.56	10.57	-0.300	0.319	-0.069	-0.162	-0.037	0.161	0.973266	1.000000	-
Rv2219	-	8	8.87	19.69	10.18	12.85	11.84	10.94	-0.327	0.505	-0.196	0.037	-0.047	-0.126	0.839885	1.000000	-
Rv2219A	-	3	166.14	122.23	110.68	99.24	130.02	118.94	0.402	-0.026	-0.163	-0.314	0.060	-0.064	0.688488	1.000000	-
Rv2220	glnA1	29	0.27	0.17	0.00	0.00	0.00	0.00	0.054	0.028	-0.021	-0.021	-0.021	-0.021	0.654525	1.000000	-
Rv2221c	glnE	39	5.44	7.31	7.93	1.19	1.11	4.31	0.129	0.366	0.437	-0.625	-0.644	-0.036	0.000048	0.001533	-
Rv2222c	glnA2	20	129.15	214.35	158.19	204.26	254.24	171.75	-0.530	0.180	-0.247	0.112	0.421	-0.132	0.016590	0.267985	-
Rv2223c	-	29	221.12	194.01	197.04	210.84	203.89	217.96	0.090	-0.094	-0.073	0.023	-0.025	0.069	0.947769	1.000000	-
Rv2224c	-	29	226.45	218.64	204.62	240.65	243.55	198.59	0.027	-0.022	-0.115	0.113	0.130	-0.158	0.621860	1.000000	-
Rv2225	panB	15	114.10	122.20	118.94	118.35	117.36	145.47	-0.101	-0.006	-0.044	-0.050	-0.062	0.236	0.872556	1.000000	-
Rv2226	-	25	140.10	140.28	145.26	139.32	151.47	121.46	0.004	0.006	0.055	-0.003	0.113	-0.194	0.956911	1.000000	-
Rv2227	-	19	98.47	109.61	116.72	119.57	113.56	110.51	-0.170	-0.022	0.064	0.098	0.026	-0.011	0.986560	1.000000	-
Rv2228c	-	19	13.64	20.70	15.60	12.68	18.43	17.28	-0.199	0.265	-0.054	-0.275	0.131	0.059	0.632762	1.000000	-
Rv2229c	-	5	26.42	14.29	29.24	28.57	14.79	11.20	0.287	-0.417	0.411	0.382	-0.380	-0.669	0.502606	1.000000	-
Rv2230c	-	16	77.73	79.55	81.72	69.58	89.05	65.37	0.010	0.041	0.078	-0.140	0.195	-0.224	0.880385	1.000000	-
Rv2231c	cobC	16	106.68	75.98	77.28	88.06	87.98	77.63	0.302	-0.162	-0.139	0.039	0.037	-0.133	0.665927	1.000000	-
Rv2232	-	11	86.30	90.52	86.71	99.46	99.84	67.48	-0.033	0.033	-0.026	0.162	0.167	-0.366	0.797060	1.000000	-
Rv2234	ptpA	7	71.58	57.46	49.16	76.31	71.90	63.47	0.130	-0.164	-0.370	0.216	0.136	-0.031	0.787182	1.000000	-
Rv2235	-	16	5.10	10.81	10.93	0.84	2.20	8.34	-0.171	0.475	0.486	-0.961	-0.659	0.231	0.002964	0.063246	-
Rv2236c	cobD	12	51.56	57.59	67.34	65.12	60.20	49.84	-0.169	-0.023	0.186	0.141	0.036	-0.214	0.861175	1.000000	-
Rv2237	-	17	118.32	103.08	120.71	105.67	106.49	125.31	0.060	-0.130	0.088	-0.096	-0.085	0.140	0.952369	1.000000	-
Rv2238c	ahpE	5	24.81	23.63	43.82	38.65	45.46	44.87	-0.490	-0.549	0.221	0.060	0.269	0.252	0.674695	1.000000	-
Rv2239c	-	4	45.24	88.71	61.79	125.38	178.40	37.53	-0.912	-0.012	-0.501	0.464	0.957	-1.152	0.025874	0.376412	-
Rv2240c	-	11	197.55	212.40	231.35	264.78	208.09	167.42	-0.110	-0.008	0.113	0.304	-0.037	-0.342	0.652320	1.000000	-
Rv2241	aceE	57	39.74	60.19	27.10	34.72	25.83	45.66	0.028	0.571	-0.451	-0.143	-0.509	0.207	0.000004	0.000143	-
Rv2242	-	17	4.11	4.77	5.16	3.56	7.64	2.47	-0.079	0.023	0.079	-0.168	0.394	-0.365	0.921242	1.000000	-
Rv2243	fabD	6	6.92	6.76	12.52	12.66	24.52	11.34	-0.550	-0.570	0.005	0.017	0.758	-0.095	0.762353	1.000000	-
Rv2244	acpP	6	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv2245	kasA	16	0.71	2.55	0.39	1.45	2.42	1.65	-0.193	0.209	-0.276	-0.017	0.185	0.026	0.748073	1.000000	-
Rv2246	kasB	18	0.52	1.42	1.56	3.37	8.93	2.21	-0.536	-0.317	-0.286	0.064	0.800	-0.151	0.000147	0.004307	-
Rv2247	accD6	13	0.00	0.00	0.48	0.00	1.25	0.42	-0.100	-0.100	0.034	-0.100	0.222	0.015	0.079497	0.906270	-
Rv2248	-	12	51.44	55.95	53.02	64.59	47.21	61.28	-0.102	0.009	-0.062	0.200	-0.215	0.130	0.845766	1.000000	-
Rv2249c	glpD1	20	97.65	75.17	89.55	72.65	75.35	88.10	0.221	-0.136	0.102	-0.182	-0.133	0.080	0.693185	1.000000	-
Rv2250c	-	11	163.16	147.87	151.41	149.18	139.00	146.22	0.123	-0.015	0.018	-0.003	-0.101	-0.031	0.993193	1.000000	-
Rv2250A	-	3	75.47	37.33	61.56	48.27	74.92	22.68	0.463	-0.464	0.189	-0.132	0.453	-1.076	0.144330	1.000000	-
Rv2251	-	9	128.76	75.92	123.18	103.18	100.61	83.48	0.315	-0.410	0.254	0.009	-0.026	-0.281	0.252138	1.000000	-
Rv2252	-	17	27.20	30.42	37.95	23.44	33.63	24.63	-0.102	0.036	0.314	-0.280	0.161	-0.221	0.499486	1.000000	-
Rv2253	-	12	15.34	21.23	17.49	23.52	32.64	30.42	-0.484	-0.117	-0.339	0.004	0.404	0.317	0.558594	1.000000	-
Rv2254c	-	6	139.88	36.33	110.28	119.21	135.14	72.33	0.435	-1.375	0.105	0.213	0.387	-0.471	0.522373	1.000000	-
Rv2255c	-	1	68.24	77.30	108.95	122.80	45.95	30.35	-0.138	0.030	0.500	0.665	-0.662	-1.189	1.000000	1.000000	TA sites <= 1
Rv2256c	-	6	0.00	4.22	5.26	0.00	0.00	2.47	-0.484	0.400	0.553	-0.484	-0.484	0.095	0.046436	0.593840	-
Rv2257c	-	9	148.79	160.58	151.47	96.31	111.46	154.31	0.114	0.220	0.138	-0.489	-0.288	0.164	0.405387	1.000000	-
Rv2258c	-	15	244.78	224.60	235.70	193.30	182.64	211.53	0.180	0.059	0.127	-0.153	-0.232	-0.026	0.682380	1.000000	-
Rv2259	adhE2	14	55.05	54.13	66.73	54.38	54.27	66.82	-0.082	-0.104	0.174	-0.098	-0.101	0.176	0.939709	1.000000	-
Rv2260	-	6	68.83	84.15	114.98	95.74	108.58	105.45	-0.456	-0.184	0.244	-0.008	0.165	0.125	0.784568	1.000000	-
Rv2261c	-	6	205.55	246.35	229.08	238.80	306.89	242.90	-0.247	0.008	-0.094	-0.036	0.320	-0.012	0.386397	1.000000	-
Rv2262c	-	14	223.60	237.34	232.90	214.79	203.88	201.03	0.030	0.114	0.087	-0.027	-0.100	-0.120	0.991105	1.000000	-
Rv2263	-	13	236.11	196.72	205.88	229.62	218.00	217.92	0.117	-0.141	-0.077	0.077	0.004	0.004	0.944520	1.000000	-
Rv2264c	-	32	150.88	167.53	147.74	169.01	146.89	166.32	-0.065	0.081	-0.094	0.094	-0.102	0.071	0.912157	1.000000	-
Rv2265	-	16	175.75	158.65	137.31	160.28	149.32	165.25	0.151	0.008	-0.194	0.022	-0.077	0.065	0.750367	1.000000	-
Rv2266	cyp124	17	133.42	118.15	120.69	129.92	121.26	141.54	0.063	-0.106	-0.076	0.026	-0.070	0.145	0.880132	1.000000	-
Rv2267c	-	37	26.29	26.62	21.74	27.54	29.09	29.51	-0.023	-0.008	-0.250	0.033	0.101	0.118	0.793837	1.000000	-
Rv2268c	cyp128	28	58.03	58.43	68.92	62.24	53.88	47.10	-0.002	0.007	0.228	0.092	-0.100	-0.276	0.667348	1.000000	-
Rv2269c	-	12	92.88	122.65	119.15	127.26	108.93	110.45	-0.276	0.107	0.067	0.158	-0.057	-0.038	0.949218	1.000000	-
Rv2270	lppN	11	88.52	99.64	96.50	87.51	92.17	101.49	-0.087	0.075	0.032	-0.102	-0.031	0.101	0.967521	1.000000	-
Rv2271	-	6	98.25	104.24	102.45	97.19	118.52	115.09	-0.104	-0.022	-0.046	-0.119	0.155	0.114	0.955740	1.000000	-
Rv2272	-	4	94.24	78.70	64.97	92.83	53.89	51.64	0.353	0.107	-0.151	0.332	-0.400	-0.456	0.587541	1.000000	-
Rv2273	-	5	169.71	157.15	139.03	132.88	105.72	150.27	0.245	0.137	-0.034	-0.097	-0.413	0.074	0.687817	1.000000	-
Rv2274c	-	8	25.01	45.24	41.72	35.73	31.71	46.22	-0.506	0.238	0.133	-0.065	-0.215	0.266	0.325993	1.000000	-
Rv2275	-	19	46.95	53.38	60.46	54.17	52.04	48.75	-0.149	0.019	0.184	0.038	-0.015	-0.100	0.914688	1.000000	-
Rv2276	cyp121	17	46.86	46.11	40.49	41.81	36.16	44.73	0.121	0.100	-0.068	-0.027	-0.213	0.060	0.963707	1.000000	-
Rv2277c	-	12	74.13	61.25	52.81	64.29	72.10	88.59	0.099	-0.157	-0.354	-0.092	0.062	0.341	0.745791	1.000000	-
Rv2278	-	4	220.15	229.35	208.14	226.05	210.09	156.71	0.077	0.135	-0.002	0.115	0.011	-0.400	0.886433	1.000000	-
Rv2279	-	25	301.21	310.87	338.21	323.08	309.53	322.23	-0.075	-0.030	0.090	0.025	-0.036	0.021	0.981468	1.000000	-
Rv2280	-	18	64.20	54.19	58.93	60.50	63.05	52.23	0.116	-0.109	0.002	0.037	0.092	-0.158	0.970368	1.000000	-
Rv2281	pitB	26	52.39	71.69	72.54	53.95	60.02	66.49	-0.241	0.177	0.193	-0.203	-0.061	0.075	0.587092	1.000000	-
Rv2282c	-	13	84.41	47.94	49.01	51.04	63.30	43.84	0.538	-0.218	-0.189	-0.136	0.149	-0.335	0.186125	1.000000	-
Rv2283	-	2	81.24	32.97	47.02	32.82	35.60	47.23	0.754	-0.430	0.025	-0.436	-0.333	0.030	0.282879	1.000000	-
Rv2284	lipM	28	94.45	91.77	92.49	93.78	97.24	87.19	0.024	-0.016	-0.005	0.014	0.064	-0.085	0.993711	1.000000	-
Rv2285	-	22	119.41	122.99	111.25	121.43	126.16	120.45	-0.010	0.031	-0.108	0.013	0.066	0.002	0.990364	1.000000	-
Rv2286c	-	10	173.03	130.94	162.11	168.42	151.87	154.11	0.138	-0.251	0.047	0.101	-0.044	-0.024	0.967164	1.000000	-
Rv2287	yjcE	20	165.07	140.53	155.69	151.15	149.54	135.77	0.137	-0.088	0.056	0.014	-0.001	-0.135	0.967721	1.000000	-
Rv2288	-	4	92.41	114.56	102.93	89.35	103.49	93.10	-0.099	0.197	0.049	-0.145	0.057	-0.088	0.950888	1.000000	-
Rv2289	cdh	22	121.51	132.18	127.03	151.47	133.64	134.49	-0.129	-0.013	-0.068	0.177	0.003	0.012	0.950495	1.000000	-
Rv2290	lppO	13	91.93	100.24	102.56	93.81	91.39	99.02	-0.066	0.052	0.084	-0.039	-0.074	0.035	0.999128	1.000000	-
Rv2291	sseB	16	105.03	90.67	108.35	128.75	120.92	95.09	-0.040	-0.242	0.003	0.241	0.154	-0.177	0.398940	1.000000	-
Rv2292c	-	2	89.97	56.32	122.15	74.72	61.33	73.85	0.165	-0.466	0.586	-0.088	-0.353	-0.104	0.731714	1.000000	-
Rv2293c	-	14	46.85	57.76	53.50	57.19	62.50	79.56	-0.316	-0.041	-0.142	-0.054	0.064	0.389	0.353936	1.000000	-
Rv2294	-	23	146.28	151.33	138.48	145.03	144.35	169.05	-0.027	0.021	-0.103	-0.038	-0.045	0.176	0.921825	1.000000	-
Rv2295	-	11	37.79	33.90	33.83	47.03	33.40	53.19	-0.068	-0.206	-0.208	0.214	-0.224	0.375	0.576361	1.000000	-
Rv2296	-	16	151.96	155.39	127.07	157.25	142.34	156.04	0.034	0.065	-0.215	0.081	-0.058	0.071	0.948196	1.000000	-
Rv2297	-	8	73.98	88.02	81.64	88.96	85.05	87.25	-0.175	0.061	-0.041	0.076	0.014	0.049	0.997907	1.000000	-
Rv2298	-	17	222.78	188.78	204.25	202.11	216.96	193.96	0.119	-0.115	-0.004	-0.019	0.081	-0.077	0.892160	1.000000	-
Rv2299c	htpG	29	123.49	139.86	130.59	123.74	123.83	137.11	-0.069	0.104	0.009	-0.066	-0.065	0.076	0.965224	1.000000	-
Rv2300c	-	17	43.69	61.38	45.44	49.87	47.70	46.51	-0.152	0.295	-0.101	0.020	-0.038	-0.071	0.847204	1.000000	-
Rv2301	cut2	10	236.62	212.79	229.67	211.87	227.23	243.77	0.059	-0.091	0.017	-0.097	0.001	0.101	0.968896	1.000000	-
Rv2302	-	4	399.95	373.82	369.19	264.47	324.77	341.73	0.208	0.111	0.094	-0.380	-0.089	-0.016	0.805740	1.000000	-
Rv2303c	-	19	156.41	136.38	129.09	134.14	132.92	144.10	0.166	-0.025	-0.101	-0.048	-0.061	0.052	0.961264	1.000000	-
Rv2304c	-	1	102.00	181.95	160.05	122.34	160.60	116.90	-0.445	0.360	0.180	-0.194	0.185	-0.257	1.000000	1.000000	TA sites <= 1
Rv2305	-	10	200.87	236.35	162.23	187.96	203.09	224.72	-0.012	0.218	-0.312	-0.105	0.004	0.147	0.710442	1.000000	-
Rv2306A	-	8	362.14	338.41	348.21	368.08	325.93	330.77	0.067	-0.030	0.011	0.090	-0.083	-0.062	0.997957	1.000000	-
Rv2306B	-	5	158.23	158.14	144.73	114.68	121.56	129.32	0.193	0.192	0.069	-0.255	-0.174	-0.088	0.893250	1.000000	-
Rv2307c	-	20	143.96	151.32	150.59	162.45	159.87	165.88	-0.109	-0.040	-0.046	0.060	0.037	0.089	0.911940	1.000000	-
Rv2307A	-	3	306.29	323.51	286.32	216.38	377.79	300.88	0.021	0.098	-0.075	-0.471	0.319	-0.005	0.848335	1.000000	-
Rv2307B	-	21	39.18	30.59	56.18	46.79	40.75	53.91	-0.166	-0.478	0.304	0.063	-0.116	0.249	0.112850	1.000000	-
Rv2307D	-	5	113.40	115.62	113.23	106.07	125.31	149.03	-0.083	-0.057	-0.085	-0.176	0.055	0.296	0.822223	1.000000	-
Rv2308	-	17	32.17	36.26	30.36	30.26	33.23	37.68	-0.044	0.106	-0.116	-0.120	-0.004	0.155	0.979046	1.000000	-
Rv2309c	-	9	67.56	79.88	70.92	88.02	104.30	85.23	-0.273	-0.046	-0.207	0.086	0.318	0.042	0.923967	1.000000	-
Rv2309A	-	13	131.37	145.04	126.61	141.78	146.91	156.84	-0.103	0.035	-0.154	0.004	0.053	0.144	0.971444	1.000000	-
Rv2310	-	3	119.28	86.65	99.98	130.45	96.83	61.64	0.255	-0.184	0.012	0.379	-0.032	-0.644	0.391239	1.000000	-
Rv2311	-	7	388.75	331.75	335.06	318.90	337.00	310.66	0.203	-0.022	-0.008	-0.079	-0.000	-0.116	0.628695	1.000000	-
Rv2312	-	3	255.22	251.10	228.43	241.96	184.40	213.51	0.153	0.130	-0.004	0.077	-0.306	-0.099	0.970542	1.000000	-
Rv2313c	-	10	271.04	267.85	261.65	300.89	291.78	278.11	-0.039	-0.056	-0.089	0.109	0.066	-0.002	0.996687	1.000000	-
Rv2314c	-	16	144.06	154.98	192.58	170.79	147.20	167.30	-0.171	-0.069	0.236	0.067	-0.141	0.038	0.944386	1.000000	-
Rv2315c	-	33	70.69	59.41	67.95	63.98	60.86	64.92	0.120	-0.112	0.067	-0.014	-0.081	0.006	0.968275	1.000000	-
Rv2316	uspA	13	161.52	133.72	156.34	137.74	131.94	142.61	0.161	-0.103	0.115	-0.062	-0.122	-0.013	0.969984	1.000000	-
Rv2317	uspB	14	42.03	37.85	67.18	48.65	41.82	42.48	-0.136	-0.270	0.482	0.054	-0.142	-0.122	0.203290	1.000000	-
Rv2318	uspC	30	44.54	52.37	51.82	44.38	41.08	48.48	-0.073	0.139	0.125	-0.078	-0.178	0.037	0.812032	1.000000	-
Rv2319c	-	19	100.77	83.88	106.35	89.24	98.33	79.85	0.109	-0.142	0.183	-0.057	0.075	-0.209	0.839971	1.000000	-
Rv2320c	rocE	28	79.93	76.89	73.72	68.98	81.40	83.55	0.043	-0.009	-0.066	-0.156	0.068	0.104	0.933616	1.000000	-
Rv2321c	rocD2	9	68.09	52.81	50.72	80.61	61.34	53.70	0.143	-0.196	-0.249	0.371	0.003	-0.174	0.654458	1.000000	-
Rv2322c	rocD1	10	71.82	70.01	59.99	67.56	56.17	76.70	0.093	0.058	-0.149	0.010	-0.236	0.181	0.920610	1.000000	-
Rv2323c	-	22	127.42	146.64	137.18	122.97	129.15	136.88	-0.063	0.132	0.039	-0.113	-0.045	0.036	0.971272	1.000000	-
Rv2324	-	2	617.09	495.07	648.28	337.54	299.90	323.16	0.440	0.125	0.511	-0.421	-0.589	-0.483	0.337317	1.000000	-
Rv2325c	-	9	91.67	144.59	104.49	100.17	126.86	86.65	-0.239	0.391	-0.059	-0.117	0.209	-0.316	0.353353	1.000000	-
Rv2326c	-	23	125.41	120.51	113.94	131.65	136.82	137.94	-0.025	-0.080	-0.158	0.042	0.096	0.107	0.940075	1.000000	-
Rv2327	-	5	59.50	55.98	78.80	48.26	41.86	52.68	0.076	-0.005	0.454	-0.200	-0.385	-0.085	0.811040	1.000000	-
Rv2328	PE23	12	85.96	76.04	54.67	70.55	81.81	69.14	0.221	0.055	-0.387	-0.047	0.154	-0.074	0.880162	1.000000	-
Rv2329c	narK1	28	89.75	93.40	91.51	94.48	98.25	90.34	-0.048	0.007	-0.021	0.022	0.076	-0.039	0.997212	1.000000	-
Rv2330c	lppP	7	33.93	37.11	36.22	38.58	38.43	52.25	-0.191	-0.077	-0.108	-0.027	-0.033	0.366	0.408649	1.000000	-
Rv2331	-	6	111.29	104.06	97.60	107.39	92.40	154.92	0.000	-0.092	-0.181	-0.049	-0.256	0.460	0.685267	1.000000	-
Rv2331A	-	5	121.85	121.20	119.97	98.59	106.10	109.14	0.107	0.099	0.085	-0.186	-0.085	-0.046	0.983901	1.000000	-
Rv2332	mez	28	147.04	130.96	121.22	128.18	116.99	130.43	0.181	0.019	-0.088	-0.010	-0.137	0.014	0.863759	1.000000	-
Rv2333c	-	21	214.47	229.63	244.23	206.24	244.72	221.52	-0.079	0.017	0.105	-0.134	0.107	-0.033	0.833907	1.000000	-
Rv2334	cysK1	14	88.29	55.43	109.83	67.46	78.33	70.92	0.162	-0.464	0.462	-0.202	-0.001	-0.135	0.091119	0.996064	-
Rv2335	cysE	6	167.03	66.78	172.35	105.22	128.17	101.31	0.421	-0.840	0.465	-0.221	0.052	-0.273	0.295557	1.000000	-
Rv2336	-	29	24.59	34.02	29.07	35.41	30.54	36.70	-0.311	0.088	-0.108	0.138	-0.047	0.183	0.648142	1.000000	-
Rv2337c	-	10	186.17	224.45	210.69	187.39	179.53	175.30	-0.057	0.206	0.117	-0.048	-0.108	-0.142	0.945192	1.000000	-
Rv2338c	moeW	38	21.11	28.80	26.26	27.68	29.27	31.21	-0.311	0.061	-0.051	0.013	0.081	0.161	0.360583	1.000000	-
Rv2339	mmpL9	82	51.21	60.45	65.97	62.74	66.26	70.10	-0.270	-0.051	0.066	-0.001	0.072	0.148	0.483488	1.000000	-
Rv2340c	PE_PGRS39	16	236.45	262.27	243.75	239.11	247.30	244.44	-0.053	0.093	-0.010	-0.038	0.010	-0.006	0.999023	1.000000	-
Rv2341	lppQ	4	282.38	272.16	316.28	310.12	264.33	264.55	-0.013	-0.065	0.148	0.120	-0.107	-0.105	0.997843	1.000000	-
Rv2342	-	4	214.46	208.96	242.85	205.86	241.60	176.87	-0.004	-0.041	0.171	-0.062	0.164	-0.275	0.857724	1.000000	-
Rv2343c	dnaG	26	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv2344c	dgt	27	131.13	165.21	131.80	139.64	148.20	149.00	-0.132	0.190	-0.125	-0.044	0.039	0.046	0.947637	1.000000	-
Rv2345	-	29	378.57	380.19	345.93	366.07	335.98	350.57	0.073	0.079	-0.055	0.026	-0.096	-0.036	0.951408	1.000000	-
Rv2346c	esxO	3	244.59	344.76	313.49	265.62	265.19	320.51	-0.253	0.234	0.099	-0.136	-0.138	0.131	0.422590	1.000000	-
Rv2347c	esxP	3	178.84	161.35	148.90	144.99	152.20	153.54	0.186	0.041	-0.071	-0.108	-0.040	-0.028	0.986803	1.000000	-
Rv2348c	-	2	129.16	117.27	132.47	88.49	88.83	131.36	0.166	0.032	0.201	-0.355	-0.350	0.189	0.548326	1.000000	-
Rv2349c	plcC	28	163.47	183.03	138.12	147.65	152.86	175.28	0.029	0.188	-0.206	-0.113	-0.064	0.127	0.739750	1.000000	-
Rv2350c	plcB	23	137.09	138.63	114.00	125.21	144.00	143.26	0.035	0.050	-0.221	-0.091	0.103	0.096	0.804177	1.000000	-
Rv2351c	plcA	25	248.64	249.29	256.08	245.35	242.81	224.93	0.024	0.027	0.065	0.005	-0.010	-0.118	0.998823	1.000000	-
Rv2352c	PPE38	16	338.23	303.95	326.61	351.94	348.49	313.76	0.033	-0.119	-0.017	0.089	0.075	-0.074	0.992171	1.000000	-
Rv2353c	PPE39	24	11.07	11.67	13.02	11.01	12.08	13.22	-0.082	-0.029	0.083	-0.087	0.005	0.099	0.986726	1.000000	-
Rv2354	-	4	186.02	242.98	199.87	255.17	208.96	160.84	-0.164	0.213	-0.063	0.282	-0.000	-0.368	0.665283	1.000000	-
Rv2355	-	25	291.13	291.58	328.69	322.63	299.06	304.46	-0.072	-0.070	0.100	0.074	-0.034	-0.008	0.948023	1.000000	-
Rv2356c	PPE40	30	109.01	94.46	105.93	91.19	88.26	104.13	0.135	-0.062	0.095	-0.110	-0.155	0.072	0.987641	1.000000	-
Rv2357c	glyS	31	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv2358	-	5	94.52	97.32	79.12	1.85	2.35	83.10	0.621	0.661	0.378	-3.239	-3.138	0.445	0.000064	0.001980	-
Rv2359	furB	5	83.65	88.70	59.43	0.96	0.00	81.71	0.627	0.707	0.166	-3.268	-3.521	0.595	0.000153	0.004433	-
Rv2360c	-	6	306.05	286.03	342.82	261.50	278.23	235.63	0.101	0.005	0.262	-0.122	-0.034	-0.269	0.878875	1.000000	-
Rv2361c	-	17	3.65	1.19	3.14	1.15	3.71	4.17	0.143	-0.341	0.055	-0.349	0.152	0.227	0.871204	1.000000	-
Rv2362c	recO	11	149.10	133.67	141.07	157.88	162.04	129.00	0.035	-0.118	-0.043	0.114	0.151	-0.167	0.939392	1.000000	-
Rv2363	amiA2	17	95.23	149.17	102.21	147.24	145.33	112.86	-0.379	0.242	-0.282	0.224	0.206	-0.145	0.296400	1.000000	-
Rv2364c	era	15	0.00	3.04	0.84	0.94	0.30	1.03	-0.269	0.416	-0.045	-0.021	-0.185	0.002	0.003504	0.072818	-
Rv2365c	-	4	155.48	162.60	132.05	142.85	84.79	119.87	0.218	0.281	-0.009	0.100	-0.619	-0.144	0.852084	1.000000	-
Rv2366c	-	22	109.03	119.17	93.95	109.50	108.89	99.11	0.031	0.154	-0.174	0.037	0.029	-0.100	0.936401	1.000000	-
Rv2367c	-	9	40.54	45.65	41.03	48.64	36.91	32.95	-0.013	0.140	0.003	0.223	-0.133	-0.276	0.997070	1.000000	-
Rv2368c	phoH1	17	155.06	148.11	159.90	135.95	146.88	164.66	0.030	-0.034	0.073	-0.153	-0.046	0.114	0.922659	1.000000	-
Rv2369c	-	3	136.98	147.76	147.23	186.63	120.30	187.19	-0.166	-0.061	-0.066	0.266	-0.347	0.270	0.870215	1.000000	-
Rv2370c	-	20	189.18	170.61	177.29	183.80	187.74	186.24	0.051	-0.094	-0.040	0.010	0.040	0.029	0.997840	1.000000	-
Rv2371	PE_PGRS40	1	18.70	0.00	6.30	0.00	26.20	0.00	0.808	-1.437	-0.260	-1.437	1.205	-1.437	1.000000	1.000000	TA sites <= 1
Rv2372c	-	6	375.67	307.34	323.05	316.84	311.56	308.17	0.211	-0.074	-0.003	-0.031	-0.055	-0.070	0.991593	1.000000	-
Rv2373c	dnaJ2	10	14.14	17.80	12.57	5.63	3.53	17.90	0.177	0.430	0.054	-0.671	-0.990	0.436	0.004645	0.092662	-
Rv2374c	hrcA	23	54.47	53.97	54.51	48.25	34.20	46.73	0.147	0.135	0.148	-0.012	-0.454	-0.053	0.484318	1.000000	-
Rv2375	-	9	138.77	164.25	149.56	156.36	183.10	189.81	-0.230	0.005	-0.126	-0.064	0.158	0.208	0.881900	1.000000	-
Rv2376c	cfp2	2	681.41	679.32	794.17	579.88	494.53	572.32	0.104	0.100	0.324	-0.127	-0.354	-0.146	0.019027	0.301624	-
Rv2377c	mbtH	2	322.91	213.47	270.07	244.07	175.95	180.23	0.454	-0.132	0.200	0.057	-0.404	-0.370	0.944566	1.000000	-
Rv2378c	mbtG	9	224.69	180.60	187.58	193.22	191.10	207.84	0.182	-0.126	-0.073	-0.031	-0.046	0.072	0.989171	1.000000	-
Rv2379c	mbtF	64	157.82	152.04	155.39	145.37	154.33	137.38	0.067	0.015	0.046	-0.047	0.036	-0.126	0.913022	1.000000	-
Rv2380c	mbtE	79	148.90	138.45	140.09	141.33	132.15	138.18	0.087	-0.014	0.002	0.015	-0.079	-0.017	0.951960	1.000000	-
Rv2381c	mbtD	43	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv2382c	mbtC	17	140.41	147.12	131.83	164.69	152.14	164.08	-0.093	-0.027	-0.180	0.130	0.019	0.125	0.616864	1.000000	-
Rv2383c	mbtB	50	171.47	195.49	185.15	195.84	185.18	177.34	-0.107	0.077	0.001	0.079	0.001	-0.060	0.871504	1.000000	-
Rv2384	mbtA	21	184.80	208.51	166.34	192.37	192.86	187.96	-0.030	0.140	-0.178	0.026	0.030	-0.006	0.904193	1.000000	-
Rv2385	mbtJ	19	106.20	135.20	118.10	153.24	157.23	135.83	-0.325	0.009	-0.178	0.184	0.220	0.016	0.191737	1.000000	-
Rv2386c	mbtI	18	35.36	50.89	32.66	46.48	55.65	65.32	-0.386	0.084	-0.486	-0.035	0.202	0.415	0.126568	1.000000	-
Rv2387	-	24	187.70	190.65	172.54	192.26	189.51	187.36	0.008	0.030	-0.111	0.042	0.021	0.005	0.996518	1.000000	-
Rv2388c	hemN	20	215.73	227.30	216.24	231.74	212.81	246.71	-0.060	0.014	-0.057	0.041	-0.079	0.130	0.987768	1.000000	-
Rv2389c	rpfD	10	146.93	157.14	167.32	177.01	184.14	170.19	-0.180	-0.086	0.002	0.081	0.136	0.026	0.948253	1.000000	-
Rv2390c	-	6	81.88	70.60	77.71	82.42	96.27	88.81	-0.018	-0.218	-0.089	-0.009	0.203	0.093	0.994879	1.000000	-
Rv2391	nirA	19	58.63	49.08	65.83	52.05	58.56	28.94	0.154	-0.080	0.309	-0.003	0.152	-0.753	0.180875	1.000000	-
Rv2392	cysH	13	45.23	16.82	41.39	45.54	41.29	13.60	0.366	-0.837	0.251	0.375	0.248	-1.068	0.018798	0.300018	-
Rv2393	-	7	49.77	77.11	54.48	66.17	43.12	50.96	-0.177	0.407	-0.058	0.200	-0.364	-0.146	0.856773	1.000000	-
Rv2394	ggtB	30	147.44	136.92	158.49	136.31	149.56	140.81	0.024	-0.079	0.125	-0.085	0.044	-0.040	0.955803	1.000000	-
Rv2395	-	37	167.58	145.38	172.01	140.94	154.24	171.71	0.077	-0.122	0.113	-0.165	-0.039	0.111	0.949767	1.000000	-
Rv2396	PE_PGRS41	14	242.85	234.82	250.35	215.67	221.86	213.80	0.077	0.030	0.120	-0.090	-0.050	-0.102	0.994276	1.000000	-
Rv2397c	cysA1	15	70.33	48.37	79.64	108.93	92.75	34.40	-0.039	-0.536	0.129	0.558	0.337	-0.974	0.000116	0.003458	-
Rv2398c	cysW	18	45.05	36.71	67.97	70.05	65.73	35.01	-0.223	-0.486	0.321	0.361	0.276	-0.546	0.061881	0.750114	-
Rv2399c	cysT	10	65.03	40.65	55.63	81.51	82.49	41.49	0.083	-0.535	-0.125	0.387	0.404	-0.509	0.427711	1.000000	-
Rv2400c	subI	19	67.07	55.66	66.71	111.75	100.07	43.95	-0.136	-0.385	-0.143	0.560	0.408	-0.694	0.000201	0.005613	-
Rv2401	-	4	163.49	168.16	123.30	193.64	205.61	176.27	-0.069	-0.030	-0.462	0.168	0.253	0.036	0.926117	1.000000	-
Rv2401A	-	1	5.47	0.00	0.00	0.00	9.00	0.00	0.498	-0.568	-0.568	-0.568	0.918	-0.568	1.000000	1.000000	TA sites <= 1
Rv2402	-	28	170.88	162.81	175.08	183.24	178.75	163.77	-0.013	-0.080	0.021	0.085	0.051	-0.072	0.952031	1.000000	-
Rv2403c	lppR	7	20.50	37.11	33.42	38.12	35.46	30.48	-0.557	0.167	0.034	0.201	0.109	-0.080	0.539411	1.000000	-
Rv2404c	lepA	30	217.55	168.91	193.92	150.81	139.54	179.94	0.305	-0.051	0.143	-0.209	-0.317	0.038	0.394773	1.000000	-
Rv2405	-	9	180.35	174.75	139.54	166.91	144.96	133.63	0.197	0.153	-0.162	0.088	-0.109	-0.222	0.726456	1.000000	-
Rv2406c	-	8	199.92	207.06	185.15	193.72	185.40	176.96	0.062	0.111	-0.046	0.017	-0.045	-0.110	0.983897	1.000000	-
Rv2407	-	10	241.32	189.69	210.50	208.95	220.41	204.85	0.179	-0.161	-0.014	-0.025	0.051	-0.052	0.988488	1.000000	-
Rv2408	PE24	16	122.93	138.11	115.99	137.24	148.92	139.56	-0.118	0.044	-0.198	0.035	0.149	0.059	0.885691	1.000000	-
Rv2409c	-	20	98.44	103.86	100.44	134.44	110.09	115.94	-0.160	-0.086	-0.132	0.271	-0.006	0.066	0.209323	1.000000	-
Rv2410c	-	11	155.86	148.95	154.63	186.04	153.23	143.11	-0.010	-0.073	-0.021	0.238	-0.034	-0.129	0.962443	1.000000	-
Rv2411c	-	24	174.79	158.38	151.12	181.03	200.82	162.92	0.027	-0.111	-0.177	0.076	0.222	-0.072	0.837733	1.000000	-
Rv2412	rpsT	1	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	TA sites <= 1
Rv2413c	-	13	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv2414c	-	12	239.65	188.63	223.98	240.78	213.84	189.84	0.146	-0.191	0.050	0.153	-0.015	-0.183	0.983189	1.000000	-
Rv2415c	-	14	111.16	105.23	127.22	129.15	122.88	95.68	-0.050	-0.125	0.137	0.158	0.089	-0.256	0.725415	1.000000	-
Rv2416c	eis	28	88.38	81.26	99.56	92.94	83.20	75.97	0.023	-0.091	0.186	0.092	-0.059	-0.182	0.836203	1.000000	-
Rv2417c	-	12	159.70	146.29	152.07	158.96	125.67	142.87	0.110	-0.012	0.042	0.104	-0.224	-0.045	0.975721	1.000000	-
Rv2418c	-	21	10.07	25.62	9.70	25.82	25.21	13.48	-0.630	0.393	-0.665	0.403	0.374	-0.336	0.004416	0.088543	-
Rv2419c	-	7	89.71	110.55	121.08	163.72	136.34	121.18	-0.443	-0.156	-0.030	0.390	0.134	-0.029	0.431008	1.000000	-
Rv2420c	-	5	13.55	13.28	11.81	15.99	14.09	16.99	-0.056	-0.077	-0.198	0.122	-0.015	0.189	0.989556	1.000000	-
Rv2421c	nadD	14	0.83	0.00	0.00	0.00	0.32	0.00	0.167	-0.054	-0.054	-0.054	0.036	-0.054	0.653047	1.000000	-
Rv2422	-	4	79.58	130.02	112.52	104.98	96.74	131.61	-0.434	0.241	0.041	-0.055	-0.167	0.258	0.543534	1.000000	-
Rv2423	-	18	218.37	236.62	207.12	204.31	213.42	234.33	-0.004	0.109	-0.079	-0.098	-0.037	0.095	0.970303	1.000000	-
Rv2424c	-	7	209.50	174.42	203.09	211.99	185.19	182.36	0.105	-0.153	0.061	0.122	-0.068	-0.090	0.989880	1.000000	-
Rv2425c	-	18	157.71	147.17	132.98	151.02	149.15	140.33	0.104	0.007	-0.134	0.043	0.026	-0.059	0.955706	1.000000	-
Rv2426c	-	10	208.30	216.72	182.02	162.82	151.14	158.31	0.206	0.262	0.017	-0.140	-0.244	-0.179	0.761309	1.000000	-
Rv2427c	proA	16	251.61	226.10	223.98	208.25	156.12	190.85	0.259	0.108	0.094	-0.008	-0.413	-0.131	0.753301	1.000000	-
Rv2428	ahpC	9	47.92	73.43	42.62	57.59	44.82	44.84	-0.104	0.464	-0.256	0.138	-0.191	-0.190	0.811473	1.000000	-
Rv2429	ahpD	13	79.76	106.16	68.69	91.56	85.32	102.86	-0.150	0.241	-0.352	0.038	-0.058	0.198	0.199133	1.000000	-
Rv2430c	PPE41	10	117.77	100.47	100.30	152.33	144.58	136.70	-0.087	-0.306	-0.308	0.271	0.198	0.120	0.365598	1.000000	-
Rv2431c	PE25	6	95.79	89.41	98.46	114.41	94.38	99.91	-0.041	-0.136	-0.004	0.203	-0.062	0.016	0.943058	1.000000	-
Rv2432c	-	7	93.46	90.21	132.14	130.10	139.72	119.00	-0.315	-0.363	0.164	0.142	0.241	0.018	0.561248	1.000000	-
Rv2433c	-	6	184.17	132.31	147.95	137.19	124.91	129.16	0.358	-0.104	0.051	-0.054	-0.184	-0.138	0.920881	1.000000	-
Rv2434c	-	25	45.65	52.50	49.87	55.76	42.87	52.77	-0.116	0.067	-0.001	0.146	-0.198	0.073	0.858647	1.000000	-
Rv2435c	-	56	39.69	46.03	50.58	50.44	47.36	52.61	-0.240	-0.049	0.074	0.071	-0.012	0.126	0.435512	1.000000	-
Rv2436	rbsK	12	130.86	127.06	115.16	109.58	115.90	102.65	0.157	0.116	-0.020	-0.089	-0.012	-0.179	0.975537	1.000000	-
Rv2437	-	9	41.88	42.61	52.12	36.93	42.09	39.68	-0.021	0.002	0.264	-0.182	-0.014	-0.090	0.921040	1.000000	-
Rv2438c	nadE	39	0.00	0.00	0.00	0.00	0.19	0.00	-0.009	-0.009	-0.009	-0.009	0.044	-0.009	0.306755	1.000000	-
Rv2438A	-	5	26.69	62.77	50.13	55.55	27.43	35.96	-0.602	0.495	0.197	0.333	-0.568	-0.231	0.659971	1.000000	-
Rv2439c	proB	12	4.39	3.40	3.40	2.74	4.89	11.45	-0.098	-0.257	-0.259	-0.376	-0.022	0.712	0.110136	1.000000	-
Rv2440c	obgE	12	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv2441c	rpmA	4	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv2442c	rplU	4	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv2443	dctA	21	195.11	202.82	182.59	201.38	203.91	208.54	-0.028	0.026	-0.121	0.016	0.034	0.066	0.988332	1.000000	-
Rv2444c	rne	32	6.57	9.18	7.33	9.55	11.20	8.33	-0.244	0.051	-0.151	0.087	0.243	-0.039	0.965006	1.000000	-
Rv2445c	ndk	4	2.91	3.80	10.89	1.23	1.81	2.53	-0.164	-0.010	0.842	-0.507	-0.379	-0.236	0.369986	1.000000	-
Rv2446c	-	7	106.47	102.58	91.03	126.08	130.62	111.36	-0.062	-0.113	-0.277	0.172	0.221	0.000	0.780664	1.000000	-
Rv2447c	folC	13	0.00	0.38	0.48	0.00	0.00	0.00	-0.041	0.066	0.092	-0.041	-0.041	-0.041	0.412734	1.000000	-
Rv2448c	valS	28	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv2449c	-	26	232.45	235.45	226.03	224.86	211.93	231.38	0.033	0.052	-0.006	-0.013	-0.097	0.027	0.991665	1.000000	-
Rv2450c	rpfE	8	157.52	153.06	158.41	124.03	129.60	151.77	0.109	0.068	0.117	-0.224	-0.163	0.057	0.944460	1.000000	-
Rv2451	-	8	76.27	105.15	85.52	110.29	116.77	97.19	-0.349	0.089	-0.194	0.155	0.234	-0.019	0.719842	1.000000	-
Rv2452c	-	7	75.66	73.39	79.55	63.21	73.46	57.27	0.097	0.056	0.165	-0.145	0.057	-0.277	0.973751	1.000000	-
Rv2453c	mobA	5	301.47	336.14	308.37	293.43	307.39	281.89	-0.015	0.139	0.017	-0.054	0.012	-0.111	0.993127	1.000000	-
Rv2454c	-	15	9.10	23.04	4.40	37.82	67.36	16.34	-1.153	-0.160	-1.738	0.450	1.207	-0.554	0.000000	0.000000	-
Rv2455c	-	37	11.73	16.99	6.35	39.31	60.13	13.95	-0.830	-0.436	-1.390	0.575	1.131	-0.651	0.000000	0.000000	-
Rv2456c	-	20	240.21	248.68	215.34	242.18	238.49	198.25	0.058	0.107	-0.096	0.070	0.048	-0.213	0.914348	1.000000	-
Rv2457c	clpX	19	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv2458	mmuM	17	420.62	438.75	423.74	399.63	396.05	413.47	0.018	0.078	0.028	-0.055	-0.068	-0.007	0.986552	1.000000	-
Rv2459	-	21	173.43	186.06	181.49	153.36	169.98	200.63	-0.032	0.066	0.031	-0.205	-0.061	0.172	0.783258	1.000000	-
Rv2460c	clpP2	10	0.00	1.04	0.00	1.84	1.18	1.09	-0.228	0.046	-0.228	0.223	0.076	0.055	0.499850	1.000000	-
Rv2461c	clpP	10	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv2462c	tig	19	203.62	191.19	188.04	223.54	221.27	208.50	-0.017	-0.105	-0.129	0.115	0.101	0.017	0.990689	1.000000	-
Rv2463	lipP	20	111.48	110.50	120.03	96.94	110.60	121.01	-0.004	-0.016	0.099	-0.196	-0.014	0.110	0.906916	1.000000	-
Rv2464c	-	11	319.33	256.86	270.37	274.66	303.79	312.02	0.139	-0.169	-0.097	-0.075	0.068	0.106	0.976123	1.000000	-
Rv2465c	-	7	0.00	0.71	0.00	0.00	0.00	0.00	-0.034	0.159	-0.034	-0.034	-0.034	-0.034	0.309247	1.000000	-
Rv2466c	-	9	69.99	80.06	64.85	82.74	54.25	80.74	-0.040	0.142	-0.143	0.186	-0.380	0.153	0.805885	1.000000	-
Rv2467	pepN	38	164.88	175.43	161.84	179.75	185.47	146.71	-0.035	0.052	-0.061	0.086	0.130	-0.198	0.612009	1.000000	-
Rv2468c	-	5	196.44	162.03	234.18	174.51	185.13	199.83	0.032	-0.238	0.280	-0.134	-0.051	0.056	0.858032	1.000000	-
Rv2469c	-	10	203.52	156.59	177.81	138.48	133.39	148.06	0.341	-0.027	0.151	-0.199	-0.251	-0.105	0.382569	1.000000	-
Rv2470	glbO	9	70.89	33.91	98.00	156.51	162.05	36.61	-0.369	-1.333	0.072	0.721	0.769	-1.236	0.000000	0.000000	-
Rv2471	aglA	16	147.29	155.28	154.04	168.31	159.73	176.33	-0.117	-0.043	-0.055	0.069	-0.004	0.135	0.958925	1.000000	-
Rv2472	-	8	70.25	73.31	72.53	60.51	60.69	71.83	0.040	0.098	0.083	-0.160	-0.156	0.070	0.984563	1.000000	-
Rv2473	-	17	168.18	182.82	180.88	161.36	160.78	140.05	0.021	0.138	0.123	-0.037	-0.042	-0.235	0.717959	1.000000	-
Rv2474c	-	13	69.10	75.33	79.89	90.65	70.98	65.03	-0.114	0.003	0.083	0.255	-0.077	-0.195	0.835539	1.000000	-
Rv2475c	-	8	19.73	20.54	18.34	20.06	29.69	27.67	-0.162	-0.115	-0.245	-0.143	0.326	0.240	0.641210	1.000000	-
Rv2476c	gdh	64	18.29	43.07	13.86	42.35	59.01	32.68	-0.776	0.270	-1.080	0.248	0.683	-0.082	0.000000	0.000000	-
Rv2477c	-	27	3.40	3.94	3.36	4.17	3.61	5.67	-0.104	-0.014	-0.111	0.023	-0.068	0.242	0.905734	1.000000	-
Rv2478c	-	6	326.78	290.08	281.07	277.51	257.04	293.19	0.181	0.012	-0.033	-0.051	-0.159	0.027	0.992038	1.000000	-
Rv2479c	-	26	281.26	296.30	320.47	317.57	288.71	306.07	-0.100	-0.026	0.086	0.073	-0.063	0.020	0.938562	1.000000	-
Rv2480c	-	4	199.33	231.85	243.28	247.75	224.08	177.49	-0.143	0.070	0.138	0.164	0.022	-0.306	0.894546	1.000000	-
Rv2481c	-	5	157.70	145.42	154.04	157.86	152.12	177.75	0.002	-0.111	-0.031	0.003	-0.048	0.170	0.972897	1.000000	-
Rv2482c	plsB2	41	125.76	109.35	121.09	123.11	109.63	106.01	0.114	-0.080	0.062	0.084	-0.076	-0.122	0.853517	1.000000	-
Rv2483c	plsC	27	40.25	50.86	54.33	34.51	57.75	49.79	-0.226	0.078	0.165	-0.422	0.246	0.050	0.109891	1.000000	-
Rv2484c	-	22	88.02	106.90	98.30	111.10	122.20	111.00	-0.258	0.008	-0.107	0.062	0.193	0.060	0.598895	1.000000	-
Rv2485c	lipQ	21	220.06	226.80	250.17	228.73	229.70	223.32	-0.061	-0.019	0.120	-0.007	-0.001	-0.040	0.987704	1.000000	-
Rv2486	echA14	10	443.08	498.56	513.07	483.54	459.87	423.41	-0.085	0.083	0.124	0.040	-0.032	-0.150	0.878817	1.000000	-
Rv2487c	PE_PGRS42	25	120.87	118.62	126.65	133.04	113.74	101.60	0.021	-0.005	0.085	0.154	-0.064	-0.219	0.904146	1.000000	-
Rv2488c	-	46	227.51	196.67	213.34	215.35	193.36	202.17	0.126	-0.079	0.035	0.048	-0.103	-0.040	0.876699	1.000000	-
Rv2489c	-	5	139.51	129.18	145.34	123.20	145.78	171.27	-0.028	-0.135	0.029	-0.201	0.033	0.258	0.981130	1.000000	-
Rv2490c	PE_PGRS43	51	202.77	175.10	195.47	183.15	164.92	147.10	0.182	-0.024	0.131	0.039	-0.108	-0.267	0.515579	1.000000	-
Rv2491	-	15	50.77	39.86	29.17	44.96	29.77	27.90	0.407	0.093	-0.300	0.248	-0.275	-0.355	0.422799	1.000000	-
Rv2492	-	31	21.07	29.85	25.51	34.60	31.50	29.78	-0.371	0.048	-0.144	0.232	0.114	0.045	0.526996	1.000000	-
Rv2493	-	0	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	TA sites <= 1
Rv2494	-	5	136.23	152.52	212.63	186.36	170.18	162.50	-0.310	-0.152	0.314	0.128	0.001	-0.064	0.851083	1.000000	-
Rv2495c	pdhC	14	74.71	52.22	65.90	78.23	51.29	44.97	0.267	-0.211	0.099	0.330	-0.234	-0.406	0.139963	1.000000	-
Rv2496c	pdhB	24	31.29	31.75	28.92	34.52	38.14	25.76	-0.017	0.001	-0.115	0.106	0.232	-0.256	0.855980	1.000000	-
Rv2497c	pdhA	23	86.63	82.16	75.63	92.74	81.58	69.24	0.086	0.014	-0.099	0.179	0.004	-0.218	0.839487	1.000000	-
Rv2498c	citE	9	126.95	129.64	163.67	144.57	132.62	95.90	-0.057	-0.027	0.298	0.124	0.004	-0.444	0.760537	1.000000	-
Rv2499c	-	6	52.51	49.41	71.40	64.75	66.90	76.79	-0.255	-0.335	0.155	0.023	0.067	0.253	0.920211	1.000000	-
Rv2500c	fadE19	28	71.65	56.16	52.82	57.13	66.34	70.18	0.186	-0.140	-0.221	-0.117	0.082	0.158	0.705287	1.000000	-
Rv2501c	accA1	27	98.58	99.73	116.77	96.74	105.30	88.31	-0.032	-0.016	0.201	-0.058	0.059	-0.183	0.892674	1.000000	-
Rv2502c	accD1	29	109.71	97.99	111.76	112.48	108.03	83.50	0.075	-0.081	0.100	0.109	0.054	-0.299	0.722573	1.000000	-
Rv2503c	scoB	7	63.07	75.53	84.21	106.71	86.09	77.18	-0.356	-0.114	0.034	0.358	0.064	-0.084	0.578330	1.000000	-
Rv2504c	scoA	13	55.18	49.43	54.18	57.22	57.50	57.68	-0.000	-0.145	-0.025	0.048	0.054	0.058	0.999144	1.000000	-
Rv2505c	fadD35	36	124.61	122.93	119.26	119.02	130.04	113.80	0.034	0.015	-0.027	-0.030	0.093	-0.092	0.985801	1.000000	-
Rv2506	-	9	350.53	276.02	352.07	255.72	187.57	237.37	0.337	-0.003	0.343	-0.111	-0.548	-0.216	0.351763	1.000000	-
Rv2507	-	19	4.92	23.00	4.62	27.55	45.02	10.52	-1.291	0.206	-1.335	0.423	1.043	-0.645	0.000000	0.000002	-
Rv2508c	-	17	112.80	143.17	165.45	139.74	125.80	96.90	-0.203	0.127	0.330	0.094	-0.052	-0.413	0.069630	0.814730	-
Rv2509	-	11	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv2510c	-	17	153.82	128.85	150.48	160.25	165.80	116.05	0.074	-0.173	0.043	0.131	0.179	-0.318	0.830527	1.000000	-
Rv2511	orn	8	12.98	26.61	11.32	29.44	37.46	25.32	-0.682	0.131	-0.822	0.255	0.557	0.071	0.001006	0.023759	-
Rv2512c	-	16	241.84	250.95	263.93	270.71	258.79	253.68	-0.084	-0.032	0.040	0.076	0.012	-0.016	0.995454	1.000000	-
Rv2513	-	8	48.65	50.23	53.92	59.55	58.88	56.30	-0.151	-0.110	-0.016	0.115	0.100	0.041	0.943400	1.000000	-
Rv2514c	-	7	60.31	62.75	55.47	67.54	65.72	71.85	-0.078	-0.025	-0.189	0.073	0.037	0.157	0.989121	1.000000	-
Rv2515c	-	21	60.10	62.70	63.50	62.13	60.57	62.29	-0.039	0.018	0.034	0.005	-0.028	0.009	0.999871	1.000000	-
Rv2516c	-	13	18.23	23.17	20.21	19.25	22.84	15.59	-0.099	0.179	0.019	-0.037	0.162	-0.273	0.989925	1.000000	-
Rv2517c	-	7	159.24	162.55	151.31	211.28	217.19	159.48	-0.147	-0.118	-0.218	0.250	0.289	-0.145	0.424790	1.000000	-
Rv2518c	lppS	21	37.28	47.61	35.06	42.66	59.03	40.54	-0.204	0.111	-0.282	-0.031	0.395	-0.097	0.268923	1.000000	-
Rv2519	PE26	35	96.09	88.87	83.78	91.32	90.82	92.06	0.082	-0.025	-0.105	0.012	0.005	0.023	0.988119	1.000000	-
Rv2520c	-	1	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	TA sites <= 1
Rv2521	bcp	10	86.98	83.89	80.34	70.89	74.07	86.60	0.106	0.057	-0.002	-0.171	-0.112	0.100	0.990053	1.000000	-
Rv2522c	-	19	88.03	90.50	100.77	87.04	82.75	85.02	-0.015	0.023	0.170	-0.031	-0.100	-0.063	0.970827	1.000000	-
Rv2523c	acpS	4	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv2524c	fas	71	6.44	5.80	3.77	3.46	5.71	3.11	0.236	0.153	-0.147	-0.200	0.140	-0.260	0.920837	1.000000	-
Rv2525c	-	13	189.07	221.11	215.09	205.92	189.59	199.04	-0.102	0.118	0.079	0.018	-0.098	-0.030	0.941893	1.000000	-
Rv2526	-	1	103.14	41.00	78.00	74.20	32.45	72.35	0.590	-0.644	0.208	0.140	-0.940	0.106	1.000000	1.000000	TA sites <= 1
Rv2527	-	9	155.30	122.02	147.57	138.13	159.21	150.07	0.092	-0.244	0.021	-0.071	0.127	0.044	0.908162	1.000000	-
Rv2528c	mrr	10	92.48	114.87	120.03	92.74	138.26	144.69	-0.326	-0.027	0.033	-0.322	0.230	0.293	0.522311	1.000000	-
Rv2529	-	16	104.74	81.31	102.47	82.08	89.54	85.79	0.193	-0.153	0.163	-0.141	-0.022	-0.080	0.736466	1.000000	-
Rv2530c	-	3	31.27	34.07	44.93	41.26	41.80	52.47	-0.342	-0.235	0.119	0.009	0.026	0.322	0.991675	1.000000	-
Rv2530A	-	5	49.32	69.83	83.73	74.30	95.13	102.76	-0.632	-0.170	0.076	-0.086	0.250	0.356	0.316885	1.000000	-
Rv2531c	-	50	100.68	106.50	112.74	106.77	114.30	118.93	-0.122	-0.044	0.034	-0.041	0.053	0.108	0.886143	1.000000	-
Rv2532c	-	6	202.75	180.74	203.58	170.00	164.92	150.72	0.177	0.015	0.183	-0.071	-0.113	-0.239	0.847932	1.000000	-
Rv2533c	nusB	4	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv2534c	efp	11	0.70	0.00	0.00	0.00	0.00	0.49	0.133	-0.056	-0.056	-0.056	-0.056	0.079	0.338481	1.000000	-
Rv2535c	pepQ	19	114.20	143.10	92.30	169.90	150.06	137.66	-0.227	0.086	-0.520	0.326	0.152	0.032	0.055641	0.689467	-
Rv2536	-	9	95.33	122.80	119.09	159.72	131.32	163.73	-0.449	-0.100	-0.143	0.266	-0.007	0.301	0.560532	1.000000	-
Rv2537c	aroD	7	10.79	11.66	10.74	8.47	13.66	8.79	0.009	0.087	0.005	-0.219	0.251	-0.186	0.995755	1.000000	-
Rv2538c	aroB	10	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv2539c	aroK	5	0.00	0.00	0.00	0.00	0.00	5.27	-0.233	-0.233	-0.233	-0.233	-0.233	0.805	0.014454	0.243331	-
Rv2540c	aroF	10	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv2541	-	3	155.78	103.06	176.99	184.68	188.77	134.72	-0.014	-0.587	0.165	0.225	0.255	-0.216	0.305132	1.000000	-
Rv2542	-	13	166.67	195.54	215.89	173.81	174.29	170.11	-0.129	0.095	0.235	-0.070	-0.066	-0.100	0.874206	1.000000	-
Rv2543	lppA	14	149.40	139.78	140.50	125.00	130.42	137.94	0.119	0.026	0.033	-0.129	-0.070	0.008	0.995180	1.000000	-
Rv2544	lppB	15	35.75	28.45	33.15	27.79	29.84	23.49	0.230	-0.055	0.135	-0.083	0.004	-0.286	0.993576	1.000000	-
Rv2545	-	10	229.90	206.40	252.71	193.09	250.94	229.67	0.017	-0.135	0.151	-0.229	0.141	0.016	0.636208	1.000000	-
Rv2546	-	9	249.25	327.75	245.56	256.19	249.74	259.44	-0.085	0.303	-0.106	-0.046	-0.082	-0.028	0.848580	1.000000	-
Rv2547	-	2	214.98	237.62	223.64	268.72	262.53	282.99	-0.204	-0.063	-0.148	0.111	0.078	0.185	0.626013	1.000000	-
Rv2548	-	5	120.67	123.01	154.14	106.66	121.44	89.53	0.016	0.043	0.357	-0.154	0.025	-0.394	0.897173	1.000000	-
Rv2549c	-	5	221.66	234.11	208.50	203.46	209.69	239.50	0.014	0.091	-0.072	-0.107	-0.064	0.123	0.988691	1.000000	-
Rv2550c	-	7	50.92	56.91	52.68	59.72	52.98	58.92	-0.110	0.037	-0.065	0.101	-0.058	0.083	0.999685	1.000000	-
Rv2551c	-	2	257.98	373.95	339.21	292.51	290.58	174.81	-0.157	0.370	0.232	0.021	0.012	-0.705	0.960550	1.000000	-
Rv2552c	aroE	5	1.51	2.08	0.00	17.21	0.00	0.00	-0.380	-0.258	-0.760	1.391	-0.760	-0.760	0.124299	1.000000	-
Rv2553c	-	18	62.94	102.73	63.88	64.21	106.71	67.06	-0.288	0.378	-0.268	-0.261	0.430	-0.203	0.000229	0.006358	-
Rv2554c	-	4	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv2555c	alaS	42	0.00	0.00	0.00	0.11	0.00	0.00	-0.005	-0.005	-0.005	0.027	-0.005	-0.005	0.599892	1.000000	-
Rv2556c	-	5	92.74	136.40	105.07	97.80	137.59	67.89	-0.187	0.346	-0.015	-0.114	0.358	-0.610	0.701638	1.000000	-
Rv2557	-	12	163.96	159.52	151.67	146.93	144.67	131.05	0.128	0.089	0.019	-0.025	-0.047	-0.185	0.905709	1.000000	-
Rv2558	-	7	330.60	353.34	365.20	350.43	329.84	364.61	-0.077	0.018	0.065	0.006	-0.080	0.062	0.996475	1.000000	-
Rv2559c	-	16	182.51	168.24	159.20	182.84	177.56	175.32	0.065	-0.049	-0.127	0.067	0.026	0.008	0.991492	1.000000	-
Rv2560	-	24	115.95	129.84	118.20	105.30	93.61	119.92	0.026	0.183	0.052	-0.107	-0.269	0.072	0.678145	1.000000	-
Rv2561	-	3	232.37	384.80	302.02	298.93	250.77	321.85	-0.354	0.361	0.017	0.002	-0.247	0.107	0.665847	1.000000	-
Rv2562	-	8	179.64	159.57	150.62	186.79	191.50	186.64	0.030	-0.136	-0.216	0.085	0.120	0.084	0.933423	1.000000	-
Rv2563	-	9	152.69	135.53	160.38	153.26	163.15	192.11	-0.061	-0.227	0.008	-0.056	0.031	0.261	0.805520	1.000000	-
Rv2564	glnQ	14	149.69	138.99	158.51	147.16	148.53	139.57	0.025	-0.079	0.105	0.001	0.014	-0.073	0.998732	1.000000	-
Rv2565	-	26	97.48	77.14	93.49	78.30	77.46	86.81	0.186	-0.134	0.128	-0.113	-0.128	0.027	0.681347	1.000000	-
Rv2566	-	52	206.10	187.13	205.02	198.97	188.77	179.56	0.083	-0.053	0.076	0.034	-0.040	-0.111	0.921583	1.000000	-
Rv2567	-	39	81.74	81.40	89.48	82.99	80.94	70.80	0.009	0.003	0.132	0.029	-0.005	-0.186	0.889789	1.000000	-
Rv2568c	-	17	33.49	28.96	25.24	28.82	32.54	31.73	0.132	-0.049	-0.216	-0.055	0.095	0.064	0.950543	1.000000	-
Rv2569c	-	23	37.79	54.85	51.59	43.46	54.45	49.23	-0.324	0.160	0.079	-0.144	0.150	0.018	0.573342	1.000000	-
Rv2570	-	4	84.83	106.41	61.80	105.93	75.51	93.83	-0.051	0.260	-0.478	0.254	-0.209	0.087	0.637552	1.000000	-
Rv2571c	-	9	224.42	225.90	198.78	243.12	235.48	199.36	0.021	0.030	-0.150	0.134	0.088	-0.146	0.955168	1.000000	-
Rv2572c	aspS	23	0.24	0.00	0.00	0.00	0.00	0.00	0.056	-0.011	-0.011	-0.011	-0.011	-0.011	0.601194	1.000000	-
Rv2573	-	4	343.60	265.96	300.03	258.76	365.53	204.02	0.243	-0.121	0.050	-0.160	0.331	-0.495	0.659326	1.000000	-
Rv2574	-	8	189.63	222.90	160.35	162.95	190.28	148.73	0.080	0.308	-0.155	-0.133	0.085	-0.260	0.862828	1.000000	-
Rv2575	-	18	94.66	95.53	99.64	84.43	95.00	76.66	0.054	0.067	0.125	-0.102	0.059	-0.233	0.966404	1.000000	-
Rv2576c	-	11	168.04	160.35	133.57	161.57	169.02	145.81	0.100	0.035	-0.220	0.046	0.109	-0.098	0.986748	1.000000	-
Rv2577	-	40	87.85	97.22	93.51	91.25	92.40	85.00	-0.051	0.088	0.034	0.001	0.018	-0.096	0.958242	1.000000	-
Rv2578c	-	18	140.67	137.45	129.35	113.31	134.35	127.70	0.105	0.072	-0.012	-0.195	0.041	-0.030	0.766640	1.000000	-
Rv2579	dhaA	15	168.91	181.10	168.75	171.27	143.50	155.39	0.034	0.132	0.033	0.054	-0.194	-0.082	0.992508	1.000000	-
Rv2580c	hisS	18	0.21	0.00	0.00	0.00	0.00	0.00	0.050	-0.010	-0.010	-0.010	-0.010	-0.010	0.601999	1.000000	-
Rv2581c	-	7	21.29	20.32	24.98	32.55	43.29	25.42	-0.327	-0.381	-0.137	0.188	0.550	-0.116	0.874962	1.000000	-
Rv2582	ppiB	18	5.21	6.23	2.77	6.46	10.59	4.12	-0.094	0.044	-0.488	0.073	0.516	-0.257	0.449132	1.000000	-
Rv2583c	relA	36	23.83	43.84	22.01	21.39	18.69	35.50	-0.175	0.586	-0.269	-0.302	-0.458	0.316	0.001122	0.026171	-
Rv2584c	apt	12	159.95	168.44	179.21	170.12	161.23	170.18	-0.070	0.002	0.089	0.016	-0.059	0.017	0.998554	1.000000	-
Rv2585c	-	27	171.91	156.29	156.24	182.46	178.94	159.69	0.036	-0.098	-0.098	0.119	0.092	-0.068	0.920771	1.000000	-
Rv2586c	secF	18	47.97	68.13	53.01	100.99	95.89	58.29	-0.515	-0.050	-0.384	0.485	0.414	-0.259	0.065592	0.783573	-
Rv2587c	secD	24	27.14	37.20	21.74	53.18	64.75	34.53	-0.478	-0.085	-0.743	0.378	0.640	-0.179	0.000001	0.000027	-
Rv2588c	yajC	2	94.35	168.85	107.82	104.00	124.60	199.58	-0.476	0.331	-0.293	-0.342	-0.093	0.566	0.398277	1.000000	-
Rv2589	gabT	22	226.45	212.78	213.88	222.34	209.13	227.36	0.049	-0.038	-0.031	0.024	-0.063	0.055	0.997960	1.000000	-
Rv2590	fadD9	62	173.48	193.00	182.71	203.96	196.80	206.24	-0.148	0.002	-0.075	0.080	0.030	0.096	0.419834	1.000000	-
Rv2591	PE_PGRS44	13	203.75	204.78	217.84	189.45	242.96	222.12	-0.066	-0.059	0.028	-0.168	0.183	0.056	0.919233	1.000000	-
Rv2592c	ruvB	8	47.32	64.10	58.00	56.85	73.31	53.83	-0.288	0.113	-0.020	-0.047	0.293	-0.119	0.964293	1.000000	-
Rv2593c	ruvA	6	70.24	67.84	67.19	50.88	68.70	99.74	-0.010	-0.057	-0.070	-0.439	-0.040	0.467	0.779225	1.000000	-
Rv2594c	ruvC	6	47.91	54.34	43.67	43.33	49.58	57.72	-0.041	0.125	-0.161	-0.171	0.004	0.205	0.973646	1.000000	-
Rv2595	-	0	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	TA sites <= 1
Rv2596	-	8	246.63	260.23	217.47	241.28	249.68	271.62	-0.007	0.069	-0.184	-0.038	0.011	0.130	0.960478	1.000000	-
Rv2597	-	7	357.04	311.29	368.65	297.64	316.17	310.52	0.125	-0.069	0.171	-0.133	-0.047	-0.073	0.767735	1.000000	-
Rv2598	-	5	220.96	153.44	175.84	139.69	209.50	184.50	0.283	-0.229	-0.038	-0.360	0.208	0.030	0.812802	1.000000	-
Rv2599	-	12	154.99	133.46	140.88	146.60	183.33	138.50	0.049	-0.159	-0.084	-0.029	0.284	-0.108	0.964387	1.000000	-
Rv2600	-	10	171.10	141.30	169.05	139.26	148.88	150.45	0.153	-0.114	0.136	-0.134	-0.041	-0.027	0.969204	1.000000	-
Rv2601	speE	25	252.32	218.04	241.00	218.17	227.19	222.01	0.132	-0.074	0.067	-0.073	-0.016	-0.049	0.735596	1.000000	-
Rv2601A	-	2	13.12	2.60	6.30	18.90	0.00	5.05	0.517	-0.736	-0.164	0.917	-1.340	-0.333	0.078240	0.894494	-
Rv2602	-	7	266.90	275.85	259.96	285.28	282.32	308.79	-0.067	-0.020	-0.104	0.027	0.012	0.140	0.985978	1.000000	-
Rv2603c	-	7	20.92	18.90	12.04	19.86	17.41	25.17	0.108	-0.009	-0.497	0.048	-0.102	0.327	0.423708	1.000000	-
Rv2604c	-	4	65.55	57.39	81.12	69.99	66.11	55.46	-0.008	-0.185	0.280	0.080	0.004	-0.230	0.944889	1.000000	-
Rv2605c	tesB2	9	137.27	126.85	125.41	78.90	100.88	129.12	0.229	0.119	0.103	-0.533	-0.197	0.144	0.183632	1.000000	-
Rv2606c	-	12	105.05	108.03	149.90	83.16	103.45	108.83	-0.060	-0.022	0.433	-0.380	-0.081	-0.011	0.321912	1.000000	-
Rv2607	pdxH	13	128.31	123.88	140.32	146.59	137.55	139.58	-0.081	-0.130	0.043	0.104	0.015	0.036	0.989787	1.000000	-
Rv2608	PPE42	32	92.66	104.69	95.83	100.51	99.00	106.77	-0.103	0.064	-0.057	0.008	-0.013	0.091	0.975561	1.000000	-
Rv2609c	-	13	66.98	94.28	111.86	87.58	118.20	86.26	-0.463	0.001	0.236	-0.100	0.313	-0.120	0.793388	1.000000	-
Rv2610c	pimA	16	0.00	0.00	0.00	0.00	0.00	0.34	-0.016	-0.016	-0.016	-0.016	-0.016	0.078	0.307532	1.000000	-
Rv2611c	-	15	2.27	7.45	8.98	6.66	6.74	0.67	-0.526	0.251	0.419	0.156	0.167	-0.883	0.417435	1.000000	-
Rv2612c	pgsA1	3	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv2613c	-	9	26.20	36.21	26.69	33.91	34.68	25.00	-0.184	0.217	-0.162	0.134	0.163	-0.241	0.871593	1.000000	-
Rv2614c	thrS	28	0.27	0.55	0.22	0.68	0.90	0.34	-0.060	0.015	-0.072	0.048	0.103	-0.042	0.845190	1.000000	-
Rv2614A	-	6	51.34	55.02	37.67	44.53	38.50	40.39	0.184	0.276	-0.216	-0.001	-0.189	-0.127	0.969068	1.000000	-
Rv2615c	PE_PGRS45	17	264.37	269.73	270.84	229.82	217.14	221.85	0.104	0.132	0.138	-0.094	-0.174	-0.144	0.979573	1.000000	-
Rv2616	-	5	234.12	247.16	237.85	226.68	202.78	208.84	0.048	0.125	0.071	0.003	-0.154	-0.113	0.996096	1.000000	-
Rv2617c	-	9	396.20	332.86	346.81	351.59	337.74	328.76	0.181	-0.067	-0.009	0.011	-0.047	-0.085	0.928879	1.000000	-
Rv2618	-	11	187.30	149.12	191.90	150.10	158.02	164.32	0.163	-0.157	0.197	-0.147	-0.076	-0.021	0.777967	1.000000	-
Rv2619c	-	2	212.59	156.62	162.57	166.70	156.00	109.68	0.393	-0.036	0.016	0.051	-0.041	-0.531	0.827096	1.000000	-
Rv2620c	-	6	112.46	128.16	84.88	113.23	133.28	163.43	-0.119	0.062	-0.505	-0.110	0.116	0.401	0.178222	1.000000	-
Rv2621c	-	5	51.43	74.70	66.19	68.79	46.95	72.66	-0.279	0.219	0.057	0.108	-0.398	0.182	0.839196	1.000000	-
Rv2622	-	8	131.18	129.61	115.77	135.22	116.85	141.40	0.030	0.014	-0.143	0.073	-0.130	0.135	0.988247	1.000000	-
Rv2623	TB31.7	8	58.12	58.90	75.05	61.69	62.36	65.35	-0.120	-0.102	0.223	-0.040	-0.026	0.037	0.987320	1.000000	-
Rv2624c	-	11	61.72	77.78	63.97	61.07	53.38	50.26	0.008	0.319	0.056	-0.006	-0.185	-0.264	0.820204	1.000000	-
Rv2625c	-	19	122.54	87.84	107.97	97.04	110.47	78.64	0.270	-0.188	0.095	-0.052	0.127	-0.338	0.641226	1.000000	-
Rv2626c	-	6	66.18	74.35	68.51	44.40	41.18	48.18	0.196	0.353	0.243	-0.331	-0.428	-0.225	0.905953	1.000000	-
Rv2627c	-	21	55.23	40.20	50.30	34.40	38.75	41.41	0.316	-0.098	0.193	-0.296	-0.145	-0.060	0.210595	1.000000	-
Rv2628	-	8	129.30	76.64	112.75	106.30	110.69	69.80	0.343	-0.376	0.153	0.072	0.127	-0.502	0.738699	1.000000	-
Rv2629	-	24	102.87	84.65	108.76	110.39	94.18	90.44	0.059	-0.208	0.136	0.156	-0.062	-0.118	0.924924	1.000000	-
Rv2630	-	10	69.62	68.99	81.26	103.64	104.58	78.19	-0.260	-0.273	-0.051	0.282	0.294	-0.103	0.465172	1.000000	-
Rv2631	-	22	105.70	121.76	110.59	127.04	103.70	114.86	-0.104	0.092	-0.041	0.151	-0.130	0.011	0.965728	1.000000	-
Rv2632c	-	3	58.34	68.00	31.35	58.79	64.08	66.35	0.012	0.217	-0.789	0.022	0.137	0.184	0.927095	1.000000	-
Rv2633c	-	13	111.19	126.90	101.02	122.51	91.67	144.33	-0.062	0.121	-0.194	0.072	-0.327	0.300	0.411092	1.000000	-
Rv2634c	PE_PGRS46	33	147.71	145.73	140.77	154.84	144.38	139.52	0.021	0.002	-0.046	0.087	-0.011	-0.058	0.997829	1.000000	-
Rv2635	-	7	83.55	94.06	57.00	82.03	76.63	76.36	0.089	0.250	-0.425	0.064	-0.029	-0.033	0.750885	1.000000	-
Rv2636	-	18	140.13	155.56	148.21	148.25	138.16	142.31	-0.052	0.094	0.026	0.027	-0.072	-0.030	0.977499	1.000000	-
Rv2637	dedA	10	149.13	135.83	121.88	184.32	146.79	135.03	0.034	-0.096	-0.246	0.331	0.012	-0.104	0.718166	1.000000	-
Rv2638	-	5	111.43	126.02	87.51	102.56	90.96	87.55	0.135	0.306	-0.196	0.021	-0.144	-0.196	0.929664	1.000000	-
Rv2639c	-	7	224.76	189.88	174.60	208.15	227.13	180.25	0.159	-0.079	-0.196	0.051	0.174	-0.152	0.985291	1.000000	-
Rv2640c	-	5	232.13	222.60	160.81	110.96	109.19	204.04	0.411	0.352	-0.105	-0.621	-0.643	0.230	0.046607	0.594121	-
Rv2641	cadI	7	61.32	76.38	57.36	64.95	61.34	64.05	-0.062	0.233	-0.151	0.015	-0.062	-0.004	0.988790	1.000000	-
Rv2642	-	4	209.13	200.30	196.11	174.35	190.10	198.40	0.100	0.040	0.010	-0.155	-0.034	0.026	0.986402	1.000000	-
Rv2643	arsC	30	144.12	146.92	128.31	154.03	144.04	150.81	-0.006	0.021	-0.167	0.087	-0.006	0.058	0.844470	1.000000	-
Rv2644c	-	6	52.05	55.95	54.87	83.81	71.14	84.48	-0.337	-0.241	-0.267	0.302	0.080	0.313	0.290614	1.000000	-
Rv2645	-	4	102.52	73.04	57.79	77.29	92.44	76.44	0.340	-0.122	-0.436	-0.045	0.198	-0.060	0.508604	1.000000	-
Rv2646	-	19	212.34	202.06	183.96	196.63	182.65	183.27	0.131	0.061	-0.071	0.023	-0.081	-0.076	0.960241	1.000000	-
Rv2647	-	6	32.36	42.51	35.95	41.08	43.01	32.08	-0.197	0.150	-0.065	0.105	0.165	-0.208	0.971065	1.000000	-
Rv2648	-	4	185.00	228.22	206.61	239.79	235.60	156.04	-0.169	0.127	-0.013	0.197	0.172	-0.407	0.772665	1.000000	-
Rv2649	-	25	291.52	299.69	328.48	317.24	299.32	317.23	-0.082	-0.043	0.087	0.038	-0.045	0.038	0.968393	1.000000	-
Rv2650c	-	9	38.33	11.38	20.53	30.94	13.02	23.40	0.633	-0.770	-0.130	0.364	-0.632	0.024	0.037506	0.503869	-
Rv2651c	-	7	15.29	22.41	29.98	14.73	16.51	13.12	-0.223	0.211	0.563	-0.263	-0.138	-0.386	0.635983	1.000000	-
Rv2652c	-	7	40.93	42.13	17.05	21.05	21.80	38.90	0.379	0.417	-0.679	-0.439	-0.398	0.314	0.504386	1.000000	-
Rv2653c	-	4	24.81	44.52	76.00	33.75	57.70	45.94	-0.806	-0.074	0.636	-0.428	0.267	-0.033	0.427684	1.000000	-
Rv2654c	-	0	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	TA sites <= 1
Rv2655c	-	22	138.65	148.56	165.34	149.64	143.24	158.24	-0.115	-0.019	0.130	-0.009	-0.070	0.069	0.928518	1.000000	-
Rv2656c	-	5	119.39	176.87	165.84	217.35	162.44	156.81	-0.463	0.085	-0.005	0.375	-0.034	-0.084	0.664357	1.000000	-
Rv2657c	-	5	80.75	131.21	83.73	95.27	107.74	104.62	-0.300	0.368	-0.251	-0.074	0.095	0.055	0.447604	1.000000	-
Rv2658c	-	12	175.82	175.68	181.21	203.87	179.17	191.74	-0.068	-0.069	-0.026	0.140	-0.042	0.053	0.963259	1.000000	-
Rv2659c	-	21	145.48	164.77	125.13	166.62	143.60	175.96	-0.076	0.098	-0.285	0.114	-0.094	0.190	0.576995	1.000000	-
Rv2660c	-	4	118.83	110.81	86.90	133.64	129.30	143.68	-0.020	-0.116	-0.450	0.143	0.097	0.244	0.981455	1.000000	-
Rv2661c	-	2	177.42	196.27	158.30	185.70	177.33	186.18	-0.022	0.120	-0.182	0.042	-0.023	0.046	0.949317	1.000000	-
Rv2662	-	4	116.20	113.31	108.53	94.87	118.50	89.55	0.116	0.081	0.022	-0.163	0.143	-0.242	0.989037	1.000000	-
Rv2663	-	10	150.39	145.97	127.89	177.63	136.48	155.42	0.013	-0.028	-0.212	0.246	-0.122	0.059	0.567423	1.000000	-
Rv2664	-	0	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	TA sites <= 1
Rv2665	-	6	104.28	86.61	100.45	92.33	103.48	107.42	0.070	-0.184	0.019	-0.097	0.059	0.111	0.992831	1.000000	-
Rv2666	-	11	276.92	256.36	283.85	268.09	233.78	272.67	0.061	-0.048	0.096	0.015	-0.179	0.039	0.985759	1.000000	-
Rv2667	clpC2	6	121.82	178.38	109.24	126.42	149.55	158.26	-0.199	0.333	-0.350	-0.148	0.086	0.165	0.736762	1.000000	-
Rv2668	-	9	125.48	152.01	164.63	241.63	240.02	158.86	-0.507	-0.240	-0.129	0.411	0.402	-0.179	0.005591	0.109895	-
Rv2669	-	8	62.43	51.58	58.06	61.72	53.45	44.10	0.163	-0.090	0.066	0.148	-0.043	-0.295	0.930747	1.000000	-
Rv2670c	-	18	91.79	98.06	91.75	82.77	93.88	86.63	0.015	0.105	0.014	-0.126	0.046	-0.064	0.983937	1.000000	-
Rv2671	ribD	13	102.62	126.52	101.67	128.48	110.77	156.69	-0.229	0.060	-0.242	0.082	-0.124	0.358	0.508116	1.000000	-
Rv2672	-	19	188.25	157.29	162.40	205.74	202.48	165.74	0.060	-0.191	-0.147	0.185	0.163	-0.118	0.763751	1.000000	-
Rv2673	-	29	4.88	7.36	10.14	14.67	11.97	13.27	-0.639	-0.315	-0.023	0.355	0.142	0.248	0.901891	1.000000	-
Rv2674	-	8	240.49	243.20	255.76	227.76	282.67	228.13	-0.034	-0.018	0.053	-0.111	0.195	-0.108	0.947286	1.000000	-
Rv2675c	-	14	251.03	223.04	235.10	231.29	240.99	261.34	0.061	-0.106	-0.032	-0.055	0.003	0.118	0.992421	1.000000	-
Rv2676c	-	13	1.47	0.77	1.68	225.81	243.14	23.84	-3.762	-3.928	-3.717	1.395	1.499	-1.606	0.000000	0.000000	-
Rv2677c	hemY	16	31.40	25.26	30.78	228.45	185.37	45.15	-1.400	-1.667	-1.425	1.281	0.987	-0.938	0.000000	0.000000	-
Rv2678c	hemE	17	4.08	2.43	2.19	109.50	115.46	3.58	-2.295	-2.584	-2.630	1.362	1.435	-2.377	0.000000	0.000000	-
Rv2679	echA15	6	185.39	197.02	193.84	159.56	164.22	211.04	0.002	0.087	0.064	-0.209	-0.168	0.184	0.830283	1.000000	-
Rv2680	-	10	89.10	103.59	78.96	80.06	82.73	84.38	0.041	0.248	-0.124	-0.105	-0.060	-0.033	0.767369	1.000000	-
Rv2681	-	19	135.61	132.36	147.81	130.18	135.16	141.56	-0.015	-0.049	0.105	-0.072	-0.020	0.044	0.996213	1.000000	-
Rv2682c	dxs1	24	0.00	0.00	0.00	0.00	1.39	0.00	-0.066	-0.066	-0.066	-0.066	0.289	-0.066	0.165371	1.000000	-
Rv2683	-	11	236.10	190.65	226.98	163.71	165.67	167.13	0.294	-0.008	0.238	-0.221	-0.205	-0.193	0.091009	0.996064	-
Rv2684	arsA	20	208.92	131.02	206.17	91.12	111.54	121.18	0.512	-0.141	0.494	-0.642	-0.364	-0.249	0.000000	0.000000	-
Rv2685	arsB1	14	154.59	133.73	135.30	116.72	151.40	119.37	0.187	-0.015	0.001	-0.204	0.158	-0.173	0.366401	1.000000	-
Rv2686c	-	14	106.17	87.66	101.91	97.29	112.38	77.02	0.123	-0.140	0.067	0.003	0.202	-0.315	0.716868	1.000000	-
Rv2687c	-	12	96.00	103.54	89.66	87.91	86.55	92.70	0.047	0.151	-0.046	-0.073	-0.094	-0.000	0.992117	1.000000	-
Rv2688c	-	11	101.60	89.75	95.57	90.91	93.18	115.39	0.053	-0.117	-0.031	-0.099	-0.065	0.229	0.909314	1.000000	-
Rv2689c	-	22	277.39	216.83	278.24	279.52	260.35	234.44	0.104	-0.244	0.108	0.115	0.014	-0.134	0.801338	1.000000	-
Rv2690c	-	32	21.12	24.14	16.22	24.16	33.35	23.01	-0.134	0.024	-0.434	0.025	0.420	-0.033	0.006934	0.133651	-
Rv2691	ceoB	14	90.77	136.79	122.51	107.67	112.14	134.22	-0.353	0.213	0.060	-0.119	-0.063	0.186	0.532532	1.000000	-
Rv2692	ceoC	3	65.64	127.05	126.18	87.65	89.38	108.92	-0.583	0.320	0.310	-0.192	-0.165	0.107	0.310277	1.000000	-
Rv2693c	-	12	260.34	240.24	270.88	201.91	246.25	264.62	0.072	-0.041	0.128	-0.287	-0.006	0.095	0.914232	1.000000	-
Rv2694c	-	8	184.35	233.11	165.30	171.47	195.15	211.83	-0.068	0.262	-0.221	-0.170	0.012	0.127	0.752394	1.000000	-
Rv2695	-	10	299.33	311.73	308.40	332.20	317.06	304.94	-0.060	-0.003	-0.018	0.088	0.022	-0.034	0.997522	1.000000	-
Rv2696c	-	10	196.77	214.98	148.25	173.90	201.51	192.55	0.064	0.189	-0.333	-0.109	0.098	0.034	0.909521	1.000000	-
Rv2697c	dut	5	3.73	2.04	15.60	0.00	0.00	2.17	-0.031	-0.342	1.207	-0.836	-0.836	-0.316	0.000004	0.000145	-
Rv2698	-	12	4.71	10.91	5.45	1.17	2.33	6.35	-0.065	0.648	0.041	-0.718	-0.470	0.161	0.004326	0.087182	-
Rv2699c	-	4	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv2700	-	8	26.46	61.47	55.76	66.14	89.84	47.13	-0.997	0.082	-0.048	0.180	0.595	-0.269	0.081757	0.916326	-
Rv2701c	suhB	11	297.21	199.10	229.54	224.97	196.34	213.35	0.383	-0.183	0.017	-0.011	-0.203	-0.086	0.709155	1.000000	-
Rv2702	ppgK	14	15.79	25.36	25.48	44.27	58.09	27.70	-0.862	-0.315	-0.310	0.383	0.740	-0.208	0.050571	0.635771	-
Rv2703	sigA	21	0.18	0.00	0.00	0.00	0.00	0.00	0.043	-0.009	-0.009	-0.009	-0.009	-0.009	0.601470	1.000000	-
Rv2704	-	11	462.03	367.74	378.66	408.90	380.11	314.15	0.259	-0.066	-0.025	0.085	-0.019	-0.290	0.877086	1.000000	-
Rv2705c	-	10	240.06	213.04	186.48	220.00	228.81	235.60	0.119	-0.050	-0.237	-0.004	0.051	0.092	0.986198	1.000000	-
Rv2706c	-	2	212.01	183.45	194.97	186.86	152.98	241.03	0.116	-0.087	-0.002	-0.062	-0.342	0.297	0.971108	1.000000	-
Rv2707	-	28	200.18	188.57	211.17	130.08	147.07	178.38	0.182	0.098	0.257	-0.421	-0.251	0.020	0.021502	0.331254	-
Rv2708c	-	7	135.73	129.41	117.08	145.73	159.17	172.73	-0.076	-0.142	-0.281	0.023	0.147	0.261	0.909864	1.000000	-
Rv2709	-	11	185.31	177.33	164.04	178.31	164.87	181.64	0.078	0.017	-0.093	0.024	-0.086	0.050	0.998400	1.000000	-
Rv2710	sigB	13	140.05	134.23	142.80	68.70	74.61	127.22	0.278	0.219	0.305	-0.698	-0.587	0.145	0.000343	0.009245	-
Rv2711	ideR	7	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv2712c	-	15	275.58	256.49	243.79	279.44	220.74	200.25	0.160	0.059	-0.013	0.180	-0.153	-0.291	0.891720	1.000000	-
Rv2713	sthA	23	110.95	109.55	115.19	111.21	106.02	121.13	-0.017	-0.035	0.035	-0.014	-0.080	0.104	0.987784	1.000000	-
Rv2714	-	16	101.74	106.37	97.85	87.92	94.69	115.00	0.016	0.077	-0.038	-0.184	-0.083	0.184	0.957939	1.000000	-
Rv2715	-	19	63.64	69.69	76.88	68.21	71.99	76.41	-0.150	-0.028	0.105	-0.057	0.016	0.097	0.944207	1.000000	-
Rv2716	-	10	130.33	119.01	132.06	136.37	136.83	136.94	-0.017	-0.143	0.001	0.046	0.051	0.052	0.998752	1.000000	-
Rv2717c	-	10	89.94	94.59	82.52	86.40	91.15	93.44	0.004	0.073	-0.113	-0.051	0.022	0.056	0.998246	1.000000	-
Rv2718c	-	8	234.55	218.35	237.97	218.55	239.92	237.13	0.021	-0.080	0.042	-0.079	0.053	0.037	0.998927	1.000000	-
Rv2719c	-	5	191.47	148.71	173.76	130.02	144.52	105.36	0.352	-0.002	0.215	-0.190	-0.042	-0.480	0.810843	1.000000	-
Rv2720	lexA	8	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv2721c	-	29	85.67	87.36	83.63	90.72	86.11	111.02	-0.079	-0.052	-0.112	-0.000	-0.072	0.277	0.630869	1.000000	-
Rv2722	-	7	8.34	11.71	11.14	10.59	11.09	13.69	-0.271	0.054	0.004	-0.046	-0.000	0.216	0.942270	1.000000	-
Rv2723	-	27	83.13	89.29	100.10	110.55	100.93	102.84	-0.222	-0.125	0.032	0.169	0.043	0.069	0.724719	1.000000	-
Rv2724c	fadE20	25	131.75	125.56	136.27	125.53	133.00	148.36	-0.017	-0.084	0.030	-0.085	-0.004	0.148	0.840117	1.000000	-
Rv2725c	hflX	21	225.48	210.59	224.22	209.46	197.85	214.08	0.076	-0.020	0.068	-0.028	-0.108	0.003	0.975562	1.000000	-
Rv2726c	dapF	11	0.00	0.00	0.00	0.00	0.66	0.85	-0.071	-0.071	-0.071	-0.071	0.108	0.157	0.411940	1.000000	-
Rv2727c	miaA	15	62.00	69.70	62.43	37.80	36.14	62.82	0.156	0.313	0.165	-0.491	-0.548	0.173	0.888099	1.000000	-
Rv2728c	-	11	136.60	144.61	168.43	154.99	148.14	155.94	-0.144	-0.065	0.149	0.032	-0.031	0.041	0.978085	1.000000	-
Rv2729c	-	12	244.01	292.94	265.74	258.24	260.74	293.27	-0.139	0.120	-0.018	-0.059	-0.045	0.122	0.942456	1.000000	-
Rv2730	-	12	176.69	207.58	203.19	205.69	184.16	221.65	-0.173	0.054	0.024	0.041	-0.115	0.146	0.884987	1.000000	-
Rv2731	-	8	133.49	94.65	138.50	130.80	117.86	143.29	0.076	-0.399	0.127	0.047	-0.097	0.174	0.786179	1.000000	-
Rv2732c	-	6	156.43	183.76	155.43	145.55	168.84	188.34	-0.086	0.139	-0.095	-0.187	0.020	0.174	0.982723	1.000000	-
Rv2733c	-	16	261.28	248.92	194.40	189.97	176.34	220.38	0.274	0.205	-0.143	-0.176	-0.280	0.033	0.259056	1.000000	-
Rv2734	-	22	41.44	40.56	34.12	42.47	57.35	37.58	-0.025	-0.053	-0.272	0.007	0.400	-0.150	0.454472	1.000000	-
Rv2735c	-	31	97.13	105.35	110.70	105.95	109.72	109.63	-0.125	-0.014	0.054	-0.006	0.042	0.041	0.969324	1.000000	-
Rv2736c	recX	6	96.94	80.71	103.30	136.01	98.59	73.45	-0.017	-0.268	0.070	0.451	0.006	-0.395	0.292309	1.000000	-
Rv2737c	recA	29	189.85	214.65	196.72	196.44	191.82	201.49	-0.063	0.110	-0.013	-0.015	-0.048	0.021	0.977549	1.000000	-
Rv2737A	-	3	26.61	35.65	39.78	51.71	67.43	52.47	-0.679	-0.316	-0.176	0.164	0.517	0.183	0.326530	1.000000	-
Rv2738c	-	4	172.49	163.57	197.41	204.79	242.70	159.42	-0.136	-0.211	0.053	0.105	0.345	-0.247	0.953261	1.000000	-
Rv2739c	-	5	79.04	77.24	106.08	72.42	81.56	104.80	-0.128	-0.160	0.274	-0.247	-0.086	0.257	0.938985	1.000000	-
Rv2740	-	5	260.35	236.32	260.58	272.31	229.54	314.78	-0.011	-0.148	-0.009	0.053	-0.189	0.259	0.902777	1.000000	-
Rv2741	PE_PGRS47	24	211.24	187.95	220.94	204.35	200.74	189.77	0.059	-0.105	0.123	0.013	-0.012	-0.091	0.984103	1.000000	-
Rv2742c	-	15	255.57	238.10	223.96	230.38	230.31	202.75	0.148	0.048	-0.039	0.001	0.001	-0.179	0.816424	1.000000	-
Rv2743c	-	12	288.66	267.89	222.64	278.63	277.79	219.48	0.153	0.047	-0.215	0.102	0.098	-0.235	0.856465	1.000000	-
Rv2744c	35kd_ag	9	151.34	164.92	164.33	168.50	222.49	186.75	-0.214	-0.094	-0.099	-0.064	0.327	0.080	0.713082	1.000000	-
Rv2745c	-	2	341.53	280.67	325.99	411.08	397.40	392.87	-0.068	-0.347	-0.134	0.196	0.148	0.131	0.965566	1.000000	-
Rv2746c	pgsA3	14	2.70	3.29	1.35	3.02	5.35	2.22	-0.052	0.053	-0.330	0.005	0.374	-0.146	0.888094	1.000000	-
Rv2747	-	7	20.66	36.33	15.16	57.47	48.96	36.18	-0.669	0.019	-1.017	0.615	0.404	0.014	0.010957	0.196055	-
Rv2748c	ftsK	30	16.86	20.00	15.62	17.36	14.29	16.61	0.005	0.198	-0.080	0.037	-0.176	-0.012	0.995139	1.000000	-
Rv2749	-	3	234.04	182.13	241.81	210.61	220.07	180.34	0.143	-0.210	0.189	-0.006	0.056	-0.224	0.979242	1.000000	-
Rv2750	-	12	51.26	40.26	59.69	53.20	55.50	62.75	-0.063	-0.377	0.138	-0.014	0.042	0.205	0.872010	1.000000	-
Rv2751	-	23	49.19	42.37	53.99	54.79	46.81	45.38	0.012	-0.182	0.134	0.154	-0.053	-0.094	0.784161	1.000000	-
Rv2752c	-	19	73.58	47.44	61.70	57.69	49.65	60.09	0.311	-0.273	0.074	-0.015	-0.213	0.039	0.619779	1.000000	-
Rv2753c	dapA	10	0.00	0.00	0.00	0.00	0.00	0.54	-0.026	-0.026	-0.026	-0.026	-0.026	0.122	0.308328	1.000000	-
Rv2754c	thyX	9	44.44	39.72	65.95	103.41	128.91	43.99	-0.622	-0.766	-0.100	0.511	0.816	-0.635	0.000000	0.000000	-
Rv2755c	hsdS.1	7	9.64	11.66	8.93	9.18	11.74	14.14	-0.118	0.069	-0.189	-0.163	0.076	0.269	0.819198	1.000000	-
Rv2756c	hsdM	37	87.00	71.77	81.67	69.06	55.74	70.61	0.245	-0.016	0.159	-0.068	-0.354	-0.038	0.205586	1.000000	-
Rv2757c	-	8	64.23	67.68	97.84	39.54	36.66	42.11	0.136	0.206	0.707	-0.500	-0.597	-0.420	0.025440	0.373182	-
Rv2758c	-	6	28.86	44.20	31.84	49.08	36.54	25.31	-0.275	0.264	-0.153	0.400	0.020	-0.435	0.335542	1.000000	-
Rv2759c	-	9	159.71	131.24	121.57	121.32	141.76	157.95	0.195	-0.079	-0.185	-0.188	0.028	0.179	0.891981	1.000000	-
Rv2760c	-	2	309.43	273.87	263.77	320.96	380.28	314.69	-0.005	-0.178	-0.231	0.047	0.288	0.019	0.721863	1.000000	-
Rv2761c	hsdS	25	90.22	82.99	105.93	106.88	95.20	98.99	-0.095	-0.209	0.125	0.138	-0.021	0.032	0.871991	1.000000	-
Rv2762c	-	5	139.93	122.47	123.62	140.35	111.03	142.90	0.102	-0.083	-0.070	0.106	-0.219	0.131	0.966790	1.000000	-
Rv2763c	dfrA	9	0.00	1.11	0.00	0.00	0.00	0.00	-0.052	0.236	-0.052	-0.052	-0.052	-0.052	0.308565	1.000000	-
Rv2764c	thyA	22	1.43	2.77	0.00	0.00	0.00	1.59	0.108	0.381	-0.255	-0.255	-0.255	0.144	0.000165	0.004709	-
Rv2765	-	14	95.68	95.37	77.67	86.19	86.11	110.17	0.056	0.051	-0.229	-0.087	-0.088	0.250	0.815736	1.000000	-
Rv2766c	fabG	6	306.54	324.75	276.50	355.36	349.19	274.04	-0.036	0.046	-0.182	0.174	0.149	-0.195	0.903197	1.000000	-
Rv2767c	-	10	28.84	27.41	39.00	36.73	34.27	36.65	-0.198	-0.260	0.181	0.104	0.017	0.102	0.934918	1.000000	-
Rv2768c	PPE43	18	52.29	55.15	49.68	59.90	52.24	68.33	-0.097	-0.027	-0.164	0.083	-0.098	0.259	0.923348	1.000000	-
Rv2769c	PE27	17	122.96	126.17	128.77	118.66	129.00	132.04	-0.037	-0.001	0.027	-0.086	0.030	0.062	0.998700	1.000000	-
Rv2770c	PPE44	16	239.82	225.08	245.15	246.57	236.43	224.13	0.022	-0.068	0.053	0.061	0.001	-0.074	0.997838	1.000000	-
Rv2771c	-	9	186.80	169.65	196.07	188.41	184.19	206.79	-0.014	-0.149	0.054	-0.002	-0.034	0.129	0.993106	1.000000	-
Rv2772c	-	11	198.28	239.90	194.30	221.60	231.61	179.99	-0.087	0.182	-0.116	0.069	0.132	-0.223	0.744061	1.000000	-
Rv2773c	dapB	12	11.70	21.13	9.13	19.98	16.31	17.68	-0.330	0.316	-0.571	0.251	0.022	0.112	0.324862	1.000000	-
Rv2774c	-	3	98.13	86.87	82.18	73.27	66.77	84.10	0.247	0.080	0.005	-0.151	-0.276	0.036	0.980698	1.000000	-
Rv2775	-	12	43.94	49.46	39.29	47.64	46.80	57.71	-0.101	0.054	-0.245	0.005	-0.018	0.257	0.954432	1.000000	-
Rv2776c	-	15	96.38	97.78	80.05	87.49	102.67	94.15	0.048	0.067	-0.206	-0.085	0.135	0.016	0.932410	1.000000	-
Rv2777c	-	21	119.34	114.62	107.41	119.06	121.64	139.10	-0.010	-0.066	-0.155	-0.013	0.017	0.203	0.722157	1.000000	-
Rv2778c	-	9	120.08	162.06	109.93	158.84	127.31	167.64	-0.223	0.195	-0.345	0.167	-0.142	0.242	0.339976	1.000000	-
Rv2779c	-	8	46.11	52.86	57.77	53.13	49.18	49.98	-0.145	0.034	0.152	0.041	-0.061	-0.039	0.998611	1.000000	-
Rv2780	ald	25	92.18	93.75	96.08	85.59	76.08	103.16	0.016	0.039	0.072	-0.086	-0.246	0.170	0.736260	1.000000	-
Rv2781c	-	19	155.99	172.39	221.59	188.85	171.38	213.56	-0.256	-0.116	0.237	0.012	-0.125	0.185	0.584705	1.000000	-
Rv2782c	pepR	13	123.94	119.01	107.99	103.20	110.74	116.35	0.121	0.065	-0.069	-0.132	-0.034	0.034	0.983248	1.000000	-
Rv2783c	gpsI	19	0.00	0.00	0.00	0.00	2.00	0.00	-0.093	-0.093	-0.093	-0.093	0.392	-0.093	0.091843	1.000000	-
Rv2784c	lppU	6	73.94	90.24	90.70	81.62	82.12	101.75	-0.217	0.054	0.061	-0.083	-0.074	0.219	0.988751	1.000000	-
Rv2785c	rpsO	4	48.09	21.69	13.34	31.81	21.90	25.33	0.729	-0.263	-0.804	0.201	-0.252	-0.079	0.677507	1.000000	-
Rv2786c	ribF	14	10.19	8.06	8.73	16.56	9.73	11.48	-0.056	-0.274	-0.202	0.449	-0.101	0.062	0.932154	1.000000	-
Rv2787	-	27	119.87	125.46	123.67	125.59	130.93	136.65	-0.080	-0.017	-0.037	-0.016	0.042	0.101	0.984140	1.000000	-
Rv2788	sirR	7	79.08	101.35	89.55	120.58	72.89	99.38	-0.233	0.106	-0.064	0.346	-0.343	0.079	0.199283	1.000000	-
Rv2789c	fadE21	16	34.63	39.17	36.09	26.06	36.20	34.33	0.008	0.164	0.060	-0.344	0.064	-0.003	0.823982	1.000000	-
Rv2790c	ltp1	23	72.20	68.82	85.92	79.45	78.24	76.34	-0.084	-0.149	0.152	0.045	0.025	-0.009	0.951654	1.000000	-
Rv2791c	-	17	95.10	83.75	128.25	99.51	101.19	83.66	-0.049	-0.223	0.363	0.013	0.036	-0.224	0.743885	1.000000	-
Rv2792c	-	7	134.63	111.77	128.06	121.38	155.89	136.23	0.035	-0.223	-0.035	-0.109	0.239	0.051	0.920967	1.000000	-
Rv2793c	truB	10	81.32	74.33	107.17	91.78	48.97	69.08	0.043	-0.079	0.421	0.208	-0.634	-0.177	0.835976	1.000000	-
Rv2794c	-	9	0.43	0.00	0.00	0.00	0.00	0.00	0.098	-0.021	-0.021	-0.021	-0.021	-0.021	0.605764	1.000000	-
Rv2795c	-	16	33.26	27.65	32.18	31.78	36.98	37.60	0.001	-0.228	-0.041	-0.056	0.135	0.156	0.953689	1.000000	-
Rv2796c	lppV	5	51.69	30.54	56.65	50.62	53.45	42.39	0.109	-0.564	0.230	0.082	0.153	-0.149	0.687944	1.000000	-
Rv2797c	-	23	287.77	261.19	251.34	257.37	247.34	248.84	0.149	0.012	-0.042	-0.009	-0.065	-0.056	0.959757	1.000000	-
Rv2798c	-	3	167.17	193.60	243.91	208.55	143.38	183.32	-0.180	0.026	0.352	0.131	-0.394	-0.050	0.867937	1.000000	-
Rv2799	-	13	184.11	261.09	196.83	380.98	370.87	235.36	-0.548	-0.056	-0.454	0.481	0.443	-0.202	0.000832	0.020504	-
Rv2800	-	20	173.45	214.56	215.82	198.25	171.35	191.37	-0.158	0.141	0.149	0.030	-0.175	-0.020	0.654056	1.000000	-
Rv2801c	-	5	174.22	194.63	215.53	190.00	190.92	213.22	-0.168	-0.013	0.131	-0.047	-0.040	0.116	0.915621	1.000000	-
Rv2802c	-	8	289.60	357.30	238.93	286.37	264.60	297.89	0.002	0.301	-0.270	-0.014	-0.126	0.042	0.687457	1.000000	-
Rv2803	-	7	400.74	340.80	394.69	328.51	339.85	392.86	0.128	-0.102	0.107	-0.155	-0.106	0.100	0.601945	1.000000	-
Rv2804c	-	7	130.45	146.98	170.25	188.97	149.65	148.68	-0.248	-0.082	0.124	0.270	-0.057	-0.066	0.802628	1.000000	-
Rv2805	-	3	162.25	205.08	221.18	236.84	218.37	236.44	-0.385	-0.056	0.051	0.147	0.033	0.145	0.822624	1.000000	-
Rv2806	-	7	266.45	187.20	191.03	190.39	197.42	215.57	0.350	-0.148	-0.120	-0.125	-0.074	0.050	0.859408	1.000000	-
Rv2807	-	11	85.98	93.28	90.81	94.48	91.20	90.99	-0.079	0.032	-0.005	0.050	0.001	-0.002	0.999324	1.000000	-
Rv2808	-	9	59.17	58.22	50.73	59.32	49.53	62.00	0.062	0.040	-0.142	0.065	-0.173	0.124	0.936058	1.000000	-
Rv2809	-	8	64.44	70.29	65.24	50.77	54.38	93.46	-0.041	0.076	-0.024	-0.357	-0.267	0.463	0.504775	1.000000	-
Rv2810c	-	12	123.81	123.58	127.02	141.41	131.08	123.52	-0.051	-0.053	-0.015	0.134	0.029	-0.054	0.992207	1.000000	-
Rv2811	-	3	105.27	83.47	57.15	53.36	61.30	48.37	0.592	0.274	-0.235	-0.326	-0.142	-0.455	0.347705	1.000000	-
Rv2812	-	19	73.01	77.54	89.46	61.49	40.64	52.51	0.140	0.222	0.416	-0.090	-0.633	-0.299	0.190184	1.000000	-
Rv2813	-	11	39.72	42.25	56.58	59.83	58.13	55.82	-0.351	-0.272	0.110	0.184	0.146	0.092	0.681735	1.000000	-
Rv2814c	-	25	289.57	299.31	326.38	323.74	301.17	303.78	-0.084	-0.037	0.085	0.074	-0.029	-0.016	0.958618	1.000000	-
Rv2815c	-	4	200.98	246.96	230.38	235.41	205.94	169.34	-0.094	0.197	0.099	0.129	-0.060	-0.334	0.849766	1.000000	-
Rv2816c	-	14	18.45	17.82	19.12	12.96	13.91	15.00	0.145	0.105	0.186	-0.240	-0.165	-0.085	0.851058	1.000000	-
Rv2817c	-	21	24.49	24.93	24.44	23.93	24.32	23.34	0.012	0.034	0.010	-0.015	0.004	-0.045	0.999929	1.000000	-
Rv2818c	-	27	75.75	77.15	86.96	89.29	62.97	50.36	0.036	0.061	0.224	0.260	-0.212	-0.508	0.014621	0.244095	-
Rv2819c	-	23	43.57	39.57	43.54	34.82	39.22	53.25	0.037	-0.087	0.036	-0.249	-0.098	0.300	0.484134	1.000000	-
Rv2820c	-	19	94.45	77.53	69.06	85.04	78.37	87.28	0.194	-0.075	-0.232	0.050	-0.061	0.086	0.809717	1.000000	-
Rv2821c	-	13	77.64	86.14	79.49	89.97	81.50	95.92	-0.125	0.016	-0.093	0.076	-0.059	0.163	0.975844	1.000000	-
Rv2822c	-	13	59.03	64.66	61.62	56.49	66.02	82.04	-0.128	-0.007	-0.071	-0.186	0.021	0.315	0.619839	1.000000	-
Rv2823c	-	48	80.03	80.70	83.42	77.82	66.30	78.13	0.040	0.051	0.096	0.002	-0.215	0.007	0.835923	1.000000	-
Rv2824c	-	18	125.66	128.48	121.45	148.85	142.58	149.00	-0.110	-0.079	-0.157	0.126	0.066	0.127	0.601587	1.000000	-
Rv2825c	-	5	103.28	87.13	106.89	129.80	96.36	93.57	0.006	-0.227	0.053	0.322	-0.089	-0.130	0.923263	1.000000	-
Rv2826c	-	11	110.25	120.61	108.90	119.49	114.76	119.19	-0.065	0.060	-0.082	0.047	-0.009	0.043	0.998464	1.000000	-
Rv2827c	-	14	5.47	6.93	4.01	5.68	7.60	11.34	-0.177	0.011	-0.394	-0.149	0.090	0.465	0.746883	1.000000	-
Rv2828c	-	5	104.51	83.66	111.96	126.57	121.24	99.94	-0.045	-0.350	0.050	0.220	0.160	-0.106	0.930040	1.000000	-
Rv2829c	-	4	67.26	117.67	85.87	118.89	80.94	112.34	-0.500	0.264	-0.169	0.278	-0.249	0.200	0.651371	1.000000	-
Rv2830c	-	1	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	TA sites <= 1
Rv2831	echA16	6	132.26	95.35	110.39	83.62	83.43	74.25	0.435	-0.017	0.184	-0.197	-0.200	-0.358	0.382716	1.000000	-
Rv2832c	ugpC	10	64.08	52.39	61.25	51.26	56.06	64.60	0.127	-0.141	0.066	-0.169	-0.051	0.138	0.934344	1.000000	-
Rv2833c	ugpB	19	40.04	33.17	42.81	37.07	31.22	37.14	0.104	-0.135	0.190	0.005	-0.211	0.008	0.930089	1.000000	-
Rv2834c	ugpE	9	69.39	55.73	51.04	42.31	69.75	57.27	0.249	-0.043	-0.159	-0.404	0.256	-0.007	0.465431	1.000000	-
Rv2835c	ugpA	16	89.31	71.81	79.42	68.21	60.74	83.88	0.227	-0.069	0.068	-0.138	-0.293	0.142	0.578797	1.000000	-
Rv2836c	dinF	23	124.66	107.67	145.36	119.63	116.22	117.59	0.032	-0.171	0.245	-0.026	-0.066	-0.049	0.946846	1.000000	-
Rv2837c	-	13	18.44	39.90	19.23	23.69	34.50	24.50	-0.436	0.502	-0.388	-0.144	0.317	-0.104	0.183382	1.000000	-
Rv2838c	rbfA	8	51.27	67.56	41.46	58.28	59.89	35.77	-0.028	0.339	-0.305	0.142	0.178	-0.493	0.266611	1.000000	-
Rv2839c	infB	30	2.83	2.36	2.60	4.81	2.95	4.56	-0.093	-0.182	-0.136	0.232	-0.072	0.195	0.960667	1.000000	-
Rv2840c	-	7	129.50	91.58	88.80	96.40	122.34	108.77	0.274	-0.204	-0.246	-0.133	0.195	0.033	0.799390	1.000000	-
Rv2841c	nusA	14	5.87	3.66	2.66	13.21	7.03	6.38	-0.078	-0.405	-0.582	0.667	0.069	-0.011	0.748831	1.000000	-
Rv2842c	-	7	72.10	34.14	64.23	31.55	18.69	26.25	0.740	-0.238	0.585	-0.337	-0.962	-0.563	0.002010	0.045564	-
Rv2843	-	8	62.61	128.07	67.17	97.91	98.00	73.86	-0.459	0.518	-0.365	0.147	0.148	-0.237	0.024016	0.360378	-
Rv2844	-	4	88.54	122.20	70.41	126.38	122.64	87.12	-0.206	0.238	-0.517	0.284	0.243	-0.228	0.502867	1.000000	-
Rv2845c	proS	30	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv2846c	efpA	33	0.12	0.00	0.00	0.15	0.00	0.00	0.021	-0.013	-0.013	0.030	-0.013	-0.013	0.747850	1.000000	-
Rv2847c	cysG	18	42.60	56.72	48.81	62.21	54.73	39.29	-0.227	0.147	-0.050	0.270	0.100	-0.331	0.497566	1.000000	-
Rv2848c	cobB	25	182.62	168.32	177.19	173.43	163.70	158.94	0.095	-0.020	0.052	0.022	-0.059	-0.100	0.981569	1.000000	-
Rv2849c	cobO	6	123.69	101.27	86.60	87.38	88.83	82.68	0.363	0.087	-0.128	-0.115	-0.093	-0.191	0.846961	1.000000	-
Rv2850c	-	17	108.99	85.16	72.85	96.34	96.01	94.34	0.229	-0.110	-0.321	0.059	0.054	0.030	0.609625	1.000000	-
Rv2851c	-	9	141.94	107.15	114.74	126.19	129.30	118.97	0.199	-0.191	-0.097	0.035	0.069	-0.047	0.974579	1.000000	-
Rv2852c	mqo	21	140.26	130.59	116.98	123.34	128.66	107.03	0.166	0.067	-0.086	-0.013	0.046	-0.209	0.939445	1.000000	-
Rv2853	PE_PGRS48	35	158.95	183.65	169.30	168.95	179.03	169.70	-0.107	0.095	-0.019	-0.022	0.059	-0.016	0.943655	1.000000	-
Rv2854	-	18	84.51	93.82	94.34	82.05	86.01	93.97	-0.072	0.070	0.078	-0.113	-0.048	0.073	0.983406	1.000000	-
Rv2855	mtr	30	41.09	35.40	39.54	35.90	38.11	29.48	0.148	-0.042	0.099	-0.024	0.052	-0.270	0.812383	1.000000	-
Rv2856	nicT	15	73.55	57.42	68.74	50.53	60.76	76.34	0.175	-0.156	0.084	-0.325	-0.081	0.226	0.618292	1.000000	-
Rv2857c	-	12	55.60	48.40	47.93	44.53	39.40	39.26	0.253	0.070	0.058	-0.038	-0.196	-0.200	0.904229	1.000000	-
Rv2858c	aldC	14	52.85	50.85	74.30	63.52	68.93	49.84	-0.169	-0.220	0.286	0.075	0.185	-0.246	0.620159	1.000000	-
Rv2859c	-	17	100.58	116.95	128.02	126.50	115.70	101.91	-0.184	0.024	0.149	0.133	0.009	-0.166	0.792348	1.000000	-
Rv2860c	glnA4	31	78.98	80.37	92.68	75.83	87.98	84.94	-0.075	-0.051	0.143	-0.130	0.072	0.024	0.913735	1.000000	-
Rv2861c	mapB	15	14.77	20.68	11.89	31.97	40.96	20.13	-0.523	-0.145	-0.750	0.381	0.695	-0.176	0.076755	0.882569	-
Rv2862c	-	5	361.71	348.75	314.69	248.07	231.54	257.49	0.296	0.244	0.098	-0.239	-0.337	-0.186	0.466070	1.000000	-
Rv2863	-	4	234.31	259.77	229.09	294.72	230.69	226.52	-0.068	0.078	-0.100	0.257	-0.090	-0.116	0.908521	1.000000	-
Rv2864c	-	24	125.71	149.37	160.50	162.63	151.90	167.20	-0.272	-0.032	0.068	0.086	-0.009	0.125	0.860844	1.000000	-
Rv2865	-	3	145.52	171.31	128.28	159.41	132.37	161.31	-0.040	0.189	-0.215	0.088	-0.171	0.104	0.971809	1.000000	-
Rv2866	-	5	599.36	561.81	493.15	530.29	453.99	450.31	0.217	0.125	-0.061	0.042	-0.180	-0.191	0.831840	1.000000	-
Rv2867c	-	12	135.08	175.51	133.52	108.49	117.89	164.51	-0.041	0.324	-0.058	-0.345	-0.230	0.234	0.289389	1.000000	-
Rv2868c	ispG	14	32.94	23.70	23.59	5.63	2.64	27.97	0.636	0.233	0.228	-1.200	-1.676	0.434	0.342258	1.000000	-
Rv2869c	-	21	76.41	79.72	88.73	32.10	63.09	79.06	0.121	0.179	0.324	-1.013	-0.137	0.167	0.003328	0.069529	-
Rv2870c	dxr	16	35.97	42.31	33.62	45.11	36.94	41.06	-0.109	0.099	-0.194	0.182	-0.075	0.060	0.996940	1.000000	-
Rv2871	-	7	27.71	23.28	29.08	24.00	24.84	28.74	0.065	-0.145	0.124	-0.109	-0.068	0.110	0.999273	1.000000	-
Rv2872	-	11	191.79	190.60	160.67	168.77	166.69	177.75	0.120	0.112	-0.128	-0.059	-0.077	0.013	0.992956	1.000000	-
Rv2873	mpt83	13	134.23	136.49	115.02	124.35	109.85	102.83	0.150	0.173	-0.064	0.044	-0.127	-0.219	0.973411	1.000000	-
Rv2874	dipZ	46	58.13	49.07	50.38	52.13	62.99	60.06	0.062	-0.161	-0.127	-0.082	0.169	0.106	0.473146	1.000000	-
Rv2875	mpt70	12	71.72	72.78	76.71	64.86	59.35	66.01	0.060	0.080	0.151	-0.075	-0.193	-0.051	0.949640	1.000000	-
Rv2876	-	1	7.53	10.20	0.00	9.27	26.20	9.40	-0.300	-0.022	-1.626	-0.113	1.015	-0.100	1.000000	1.000000	TA sites <= 1
Rv2877c	-	20	178.08	162.75	164.81	183.97	158.65	154.12	0.090	-0.037	-0.019	0.135	-0.072	-0.113	0.958067	1.000000	-
Rv2878c	mpt53	7	163.23	142.58	156.89	168.32	168.23	146.61	0.049	-0.140	-0.007	0.092	0.091	-0.101	0.968654	1.000000	-
Rv2879c	-	11	324.27	312.55	294.23	288.92	259.30	298.43	0.128	0.076	-0.010	-0.036	-0.189	0.010	0.939738	1.000000	-
Rv2880c	-	15	263.02	268.44	241.84	255.36	221.22	248.45	0.073	0.102	-0.045	0.032	-0.171	-0.007	0.968046	1.000000	-
Rv2881c	cdsA	12	15.03	19.11	17.39	16.50	18.57	13.84	-0.118	0.149	0.043	-0.016	0.116	-0.206	0.999436	1.000000	-
Rv2882c	frr	16	3.51	3.48	2.15	2.60	3.56	1.90	0.113	0.109	-0.137	-0.049	0.122	-0.190	0.981239	1.000000	-
Rv2883c	pyrH	10	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv2884	-	15	190.56	200.92	181.06	210.46	190.71	180.54	-0.013	0.061	-0.085	0.126	-0.012	-0.089	0.990118	1.000000	-
Rv2885c	-	17	120.76	128.32	114.05	117.86	107.52	118.48	0.034	0.118	-0.045	0.000	-0.126	0.008	0.970016	1.000000	-
Rv2886c	-	21	113.79	109.12	91.79	116.24	116.24	114.78	0.043	-0.015	-0.253	0.072	0.072	0.055	0.858068	1.000000	-
Rv2887	-	8	97.14	99.34	88.68	94.46	90.26	90.93	0.053	0.084	-0.072	0.014	-0.048	-0.038	0.999159	1.000000	-
Rv2888c	amiC	33	176.34	189.16	182.13	167.19	172.74	183.71	-0.017	0.081	0.028	-0.092	-0.046	0.040	0.976231	1.000000	-
Rv2889c	tsf	10	0.00	0.50	0.00	0.00	0.00	0.47	-0.046	0.092	-0.046	-0.046	-0.046	0.084	0.415632	1.000000	-
Rv2890c	rpsB	9	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv2891	-	13	146.13	176.78	173.85	165.66	190.57	182.81	-0.233	0.033	0.010	-0.058	0.139	0.080	0.808651	1.000000	-
Rv2892c	PPE45	21	169.97	169.12	165.82	168.74	163.95	187.26	-0.007	-0.014	-0.042	-0.017	-0.057	0.129	0.998660	1.000000	-
Rv2893	-	10	232.95	262.71	247.83	267.13	227.24	241.65	-0.080	0.090	0.007	0.113	-0.115	-0.029	0.990330	1.000000	-
Rv2894c	xerC	12	96.81	111.85	114.13	137.20	114.88	129.03	-0.265	-0.066	-0.038	0.217	-0.029	0.132	0.767735	1.000000	-
Rv2895c	viuB	12	181.30	177.21	169.16	172.80	168.31	195.45	0.031	-0.001	-0.066	-0.037	-0.074	0.136	0.997338	1.000000	-
Rv2896c	-	20	198.52	175.78	195.72	201.85	204.32	190.63	0.029	-0.142	0.009	0.052	0.070	-0.028	0.984837	1.000000	-
Rv2897c	-	11	74.02	88.82	81.43	95.15	82.25	83.26	-0.174	0.074	-0.045	0.168	-0.031	-0.015	0.945998	1.000000	-
Rv2898c	-	4	23.43	20.56	45.15	24.40	26.85	29.68	-0.230	-0.383	0.589	-0.182	-0.066	0.056	0.422651	1.000000	-
Rv2899c	fdhD	13	73.32	73.56	109.45	72.87	71.88	86.53	-0.139	-0.135	0.408	-0.148	-0.166	0.085	0.641726	1.000000	-
Rv2900c	fdhF	33	139.19	116.91	131.03	128.91	126.70	130.98	0.106	-0.136	0.022	-0.001	-0.024	0.022	0.980019	1.000000	-
Rv2901c	-	9	34.27	23.68	29.64	25.30	33.09	39.55	0.129	-0.325	-0.053	-0.245	0.085	0.310	0.581184	1.000000	-
Rv2902c	rnhB	12	140.72	142.18	141.65	136.17	146.32	135.04	0.004	0.018	0.013	-0.042	0.058	-0.054	0.999588	1.000000	-
Rv2903c	lepB	12	0.32	0.00	0.00	0.00	0.38	0.00	0.057	-0.033	-0.033	-0.033	0.071	-0.033	0.614543	1.000000	-
Rv2904c	rplS	4	17.33	11.45	6.31	11.65	17.36	5.06	0.434	-0.007	-0.547	0.011	0.436	-0.716	0.534846	1.000000	-
Rv2905	lppW	16	123.86	106.57	106.60	124.83	124.47	113.71	0.083	-0.125	-0.125	0.094	0.090	-0.036	0.985559	1.000000	-
Rv2906c	trmD	10	0.39	0.50	0.00	0.00	0.73	0.00	0.032	0.062	-0.075	-0.075	0.120	-0.075	0.643592	1.000000	-
Rv2907c	rimM	7	4.30	11.69	1.80	14.21	2.71	16.00	-0.533	0.311	-0.984	0.514	-0.802	0.643	0.000592	0.015150	-
Rv2908c	-	6	23.12	23.01	17.68	33.65	22.85	15.85	0.022	0.016	-0.288	0.481	0.008	-0.409	0.722159	1.000000	-
Rv2909c	rpsP	7	4.79	6.54	6.72	10.86	15.23	12.15	-0.555	-0.318	-0.295	0.141	0.492	0.254	0.883984	1.000000	-
Rv2910c	-	10	92.24	141.42	96.57	114.83	105.05	135.40	-0.294	0.296	-0.232	0.007	-0.116	0.236	0.413810	1.000000	-
Rv2911	dacB2	10	143.16	121.81	129.48	136.82	146.50	121.93	0.100	-0.125	-0.040	0.036	0.132	-0.124	0.996979	1.000000	-
Rv2912c	-	9	117.16	141.49	122.40	124.70	114.37	140.23	-0.109	0.153	-0.048	-0.022	-0.142	0.141	0.896170	1.000000	-
Rv2913c	-	30	71.03	76.77	80.86	74.97	84.61	84.45	-0.140	-0.035	0.035	-0.067	0.097	0.094	0.896796	1.000000	-
Rv2914c	pknI	27	116.70	114.37	124.97	120.37	115.00	119.22	-0.020	-0.048	0.074	0.022	-0.041	0.009	0.998589	1.000000	-
Rv2915c	-	13	181.97	161.50	186.22	218.26	140.84	148.70	0.072	-0.096	0.104	0.328	-0.287	-0.211	0.400725	1.000000	-
Rv2916c	ffh	10	4.52	4.07	1.55	3.77	7.67	3.51	0.052	-0.017	-0.487	-0.066	0.464	-0.110	0.742278	1.000000	-
Rv2917	-	25	179.12	189.47	184.95	171.05	166.14	176.37	0.010	0.089	0.055	-0.055	-0.095	-0.012	0.992731	1.000000	-
Rv2918c	glnD	26	107.43	95.36	113.01	102.56	102.71	92.77	0.067	-0.097	0.137	0.003	0.005	-0.134	0.946325	1.000000	-
Rv2919c	glnB	6	22.08	17.79	37.46	24.05	8.13	27.91	-0.043	-0.292	0.606	0.058	-1.088	0.238	0.399444	1.000000	-
Rv2920c	amt	20	52.96	60.54	50.32	55.06	48.82	59.57	-0.039	0.138	-0.106	0.012	-0.146	0.117	0.931189	1.000000	-
Rv2921c	ftsY	13	0.30	0.00	0.00	0.33	0.00	0.00	0.053	-0.030	-0.030	0.063	-0.030	-0.030	0.752905	1.000000	-
Rv2922c	smc	41	116.10	124.98	120.00	106.43	119.19	117.34	-0.015	0.087	0.031	-0.135	0.022	0.000	0.908904	1.000000	-
Rv2922A	acyP	1	50.87	0.00	37.85	56.40	0.00	71.65	0.442	-3.040	0.059	0.578	-3.040	0.898	1.000000	1.000000	TA sites <= 1
Rv2923c	-	5	133.08	134.16	182.36	162.64	155.25	157.66	-0.205	-0.194	0.235	0.075	0.010	0.031	0.808119	1.000000	-
Rv2924c	fpg	14	329.66	313.83	274.27	302.66	315.17	318.29	0.092	0.022	-0.169	-0.029	0.028	0.042	0.918353	1.000000	-
Rv2925c	rnc	11	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv2926c	-	6	61.27	57.95	62.51	63.57	68.76	58.85	-0.019	-0.093	0.008	0.030	0.135	-0.073	0.999781	1.000000	-
Rv2927c	-	12	18.18	10.61	8.60	13.22	16.24	8.20	0.405	-0.165	-0.364	0.057	0.278	-0.407	0.949979	1.000000	-
Rv2928	tesA	26	18.95	12.16	13.12	8.78	9.65	23.00	0.313	-0.168	-0.089	-0.484	-0.396	0.538	0.037282	0.502551	-
Rv2929	-	7	18.96	14.71	12.05	11.49	11.60	15.91	0.325	0.044	-0.165	-0.214	-0.204	0.129	0.726475	1.000000	-
Rv2930	fadD26	40	274.78	150.05	220.78	108.74	91.38	190.30	0.655	-0.197	0.346	-0.644	-0.882	0.136	0.036555	0.496107	-
Rv2931	ppsA	81	206.35	107.51	188.85	77.18	63.95	145.29	0.630	-0.279	0.506	-0.732	-0.985	0.139	0.000000	0.000000	-
Rv2932	ppsB	71	189.91	104.89	178.93	60.77	54.24	127.83	0.648	-0.179	0.564	-0.920	-1.071	0.094	0.000000	0.000000	-
Rv2933	ppsC	84	231.77	123.39	229.17	88.19	73.69	160.60	0.601	-0.282	0.585	-0.745	-0.989	0.085	0.000000	0.000000	-
Rv2934	ppsD	67	316.56	165.17	267.19	114.01	97.63	202.91	0.693	-0.225	0.452	-0.741	-0.955	0.064	0.000000	0.000000	-
Rv2935	ppsE	68	425.29	231.27	374.90	157.22	128.94	260.58	0.683	-0.182	0.503	-0.724	-1.001	-0.013	0.000000	0.000000	-
Rv2936	drrA	19	283.91	283.26	232.42	244.22	266.26	318.11	0.064	0.061	-0.219	-0.149	-0.027	0.225	0.668382	1.000000	-
Rv2937	drrB	23	118.77	113.38	113.22	99.45	101.69	128.74	0.074	0.010	0.008	-0.170	-0.140	0.186	0.938924	1.000000	-
Rv2938	drrC	26	118.94	131.72	115.24	107.79	115.36	152.07	-0.052	0.089	-0.096	-0.188	-0.095	0.289	0.357801	1.000000	-
Rv2939	papA5	29	133.39	91.63	122.03	61.38	57.13	108.55	0.459	-0.059	0.335	-0.601	-0.697	0.173	0.006037	0.118070	-
Rv2940c	mas	82	376.94	201.47	359.61	157.92	131.35	257.55	0.597	-0.290	0.530	-0.632	-0.889	0.056	0.000000	0.000000	-
Rv2941	fadD28	46	163.60	111.70	150.51	62.45	67.86	152.14	0.454	-0.076	0.338	-0.867	-0.756	0.353	0.000000	0.000000	-
Rv2942	mmpL7	43	231.21	250.52	201.14	194.78	193.18	235.72	0.085	0.198	-0.112	-0.157	-0.169	0.112	0.414023	1.000000	-
Rv2943	-	11	213.28	194.09	210.62	238.39	229.72	199.20	-0.006	-0.139	-0.024	0.151	0.099	-0.102	0.974918	1.000000	-
Rv2943A	-	7	88.24	82.13	66.53	96.65	64.97	65.22	0.180	0.082	-0.202	0.305	-0.234	-0.229	0.933604	1.000000	-
Rv2944	-	10	62.84	58.51	49.72	69.59	47.91	51.52	0.137	0.042	-0.173	0.274	-0.221	-0.126	0.966760	1.000000	-
Rv2945c	lppX	10	93.80	94.99	99.33	87.16	86.46	132.71	-0.075	-0.058	0.004	-0.175	-0.186	0.404	0.865026	1.000000	-
Rv2946c	pks1	50	181.31	159.94	167.05	171.33	162.65	174.88	0.094	-0.082	-0.021	0.015	-0.058	0.044	0.948618	1.000000	-
Rv2947c	pks15	22	99.92	111.13	96.24	112.56	106.79	114.01	-0.091	0.055	-0.143	0.073	0.000	0.091	0.983224	1.000000	-
Rv2948c	fadD22	48	116.18	111.23	115.50	107.95	113.62	121.65	0.022	-0.038	0.014	-0.080	-0.009	0.086	0.982445	1.000000	-
Rv2949c	-	22	5.56	8.06	7.69	7.94	5.66	7.57	-0.194	0.112	0.071	0.100	-0.180	0.057	0.865547	1.000000	-
Rv2950c	fadD29	46	120.31	124.16	114.51	119.36	124.35	129.31	-0.019	0.024	-0.088	-0.030	0.026	0.081	0.997712	1.000000	-
Rv2951c	-	24	173.09	187.66	180.59	174.73	178.63	182.03	-0.051	0.063	0.009	-0.037	-0.006	0.020	0.998245	1.000000	-
Rv2952	-	16	61.24	73.56	60.53	61.43	64.66	83.96	-0.131	0.115	-0.147	-0.127	-0.059	0.294	0.551580	1.000000	-
Rv2953	-	25	116.54	119.63	132.06	116.35	107.70	140.44	-0.065	-0.029	0.109	-0.067	-0.174	0.194	0.891839	1.000000	-
Rv2954c	-	13	336.48	279.17	346.31	331.28	313.00	303.52	0.079	-0.186	0.120	0.057	-0.024	-0.067	0.928496	1.000000	-
Rv2955c	-	20	172.46	181.43	176.14	165.17	162.89	199.02	-0.030	0.041	-0.000	-0.091	-0.110	0.171	0.898735	1.000000	-
Rv2956	-	18	21.37	21.49	17.75	21.09	18.41	23.97	0.038	0.045	-0.175	0.023	-0.133	0.174	0.993555	1.000000	-
Rv2957	-	18	213.22	211.04	209.08	208.46	221.94	234.09	-0.020	-0.035	-0.048	-0.052	0.036	0.112	0.989053	1.000000	-
Rv2958c	-	25	108.89	124.55	111.71	132.09	126.31	118.72	-0.139	0.047	-0.103	0.129	0.067	-0.019	0.974538	1.000000	-
Rv2959c	-	31	18.71	18.38	10.80	13.08	19.25	19.76	0.130	0.110	-0.455	-0.261	0.163	0.193	0.570161	1.000000	-
Rv2960c	-	7	187.89	167.88	171.06	170.58	212.64	179.24	0.048	-0.110	-0.083	-0.087	0.222	-0.018	0.962326	1.000000	-
Rv2961	-	7	281.34	241.13	239.30	280.97	232.64	245.04	0.148	-0.070	-0.081	0.146	-0.121	-0.047	0.970202	1.000000	-
Rv2962c	-	21	125.98	128.09	104.70	127.98	116.92	123.61	0.053	0.077	-0.202	0.075	-0.050	0.027	0.967081	1.000000	-
Rv2963	-	24	79.51	81.29	84.88	82.02	93.95	94.25	-0.107	-0.076	-0.018	-0.064	0.121	0.126	0.890826	1.000000	-
Rv2964	purU	17	119.39	117.42	130.88	103.30	105.99	119.37	0.039	0.016	0.167	-0.161	-0.125	0.039	0.951355	1.000000	-
Rv2965c	coaD	4	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv2966c	-	7	170.42	190.10	173.42	190.45	182.15	144.55	-0.039	0.115	-0.014	0.117	0.055	-0.269	0.953671	1.000000	-
Rv2967c	pca	63	98.09	101.35	99.62	100.20	79.65	102.58	0.017	0.061	0.038	0.046	-0.268	0.078	0.619591	1.000000	-
Rv2968c	-	11	2.03	3.69	2.55	3.05	4.27	8.16	-0.349	-0.044	-0.246	-0.155	0.049	0.555	0.709374	1.000000	-
Rv2969c	-	11	0.00	0.00	0.00	0.45	0.00	0.00	-0.021	-0.021	-0.021	0.103	-0.021	-0.021	0.604383	1.000000	-
Rv2970c	lipN	17	180.06	205.32	198.98	183.30	189.87	171.79	-0.062	0.122	0.078	-0.037	0.012	-0.128	0.941066	1.000000	-
Rv2970A	-	4	13.28	30.65	22.66	17.66	17.60	43.50	-0.677	0.287	-0.079	-0.367	-0.371	0.731	0.000998	0.023708	-
Rv2971	-	15	5.54	14.34	14.18	9.70	9.08	10.85	-0.568	0.309	0.297	-0.087	-0.150	0.022	0.945185	1.000000	-
Rv2972c	-	12	293.88	243.13	252.47	249.12	235.83	254.44	0.202	-0.066	-0.013	-0.032	-0.109	-0.002	0.957371	1.000000	-
Rv2973c	recG	30	113.47	130.29	121.65	116.73	114.51	132.52	-0.095	0.097	0.001	-0.056	-0.082	0.120	0.931410	1.000000	-
Rv2974c	-	20	220.19	206.86	204.52	198.88	208.99	213.71	0.074	-0.014	-0.030	-0.069	0.001	0.032	0.996510	1.000000	-
Rv2975c	-	2	84.52	162.72	81.42	73.64	97.50	127.23	-0.291	0.615	-0.342	-0.478	-0.095	0.272	0.883942	1.000000	-
Rv2976c	ung	8	116.13	134.67	129.55	113.37	99.79	80.43	0.046	0.252	0.198	0.013	-0.163	-0.458	0.721419	1.000000	-
Rv2977c	thiL	9	6.69	8.06	8.67	11.81	8.32	11.78	-0.283	-0.123	-0.057	0.241	-0.094	0.239	0.980140	1.000000	-
Rv2978c	-	12	123.74	112.02	127.54	116.06	114.90	121.77	0.050	-0.087	0.092	-0.039	-0.052	0.028	0.998944	1.000000	-
Rv2979c	-	8	216.87	183.30	235.10	175.70	168.76	187.87	0.153	-0.084	0.267	-0.144	-0.200	-0.049	0.809867	1.000000	-
Rv2980	-	6	120.86	111.61	75.41	87.11	82.68	107.20	0.296	0.186	-0.350	-0.154	-0.225	0.131	0.690795	1.000000	-
Rv2981c	ddl	14	2.41	5.41	1.56	0.00	2.51	4.73	-0.068	0.422	-0.245	-0.636	-0.048	0.324	0.468331	1.000000	-
Rv2982c	gpsA	13	304.12	301.02	293.21	263.57	256.50	220.71	0.152	0.138	0.100	-0.051	-0.089	-0.302	0.673266	1.000000	-
Rv2983	-	6	75.84	75.65	55.27	58.56	82.09	56.02	0.162	0.159	-0.261	-0.185	0.270	-0.243	0.764690	1.000000	-
Rv2984	ppk	32	0.48	0.32	0.39	0.57	0.59	0.63	-0.004	-0.048	-0.028	0.019	0.024	0.035	0.991051	1.000000	-
Rv2985	mutT1	15	46.96	54.25	68.36	57.00	55.87	45.01	-0.197	-0.008	0.300	0.058	0.031	-0.252	0.494899	1.000000	-
Rv2986c	hupB	8	7.13	10.74	4.73	6.12	7.89	7.67	-0.029	0.346	-0.347	-0.155	0.059	0.033	0.843044	1.000000	-
Rv2987c	leuD	10	5.42	6.59	0.63	5.22	0.73	4.12	0.246	0.400	-0.642	0.219	-0.618	0.053	0.220655	1.000000	-
Rv2988c	leuC	13	44.95	34.51	29.16	12.94	5.68	31.58	0.666	0.328	0.118	-0.811	-1.559	0.217	0.000166	0.004709	-
Rv2989	-	8	86.63	100.16	98.77	92.13	70.26	120.52	-0.122	0.076	0.057	-0.038	-0.406	0.332	0.964054	1.000000	-
Rv2990c	-	18	152.29	159.56	148.18	134.58	165.55	199.63	-0.069	-0.004	-0.107	-0.241	0.048	0.311	0.557960	1.000000	-
Rv2991	-	5	236.70	200.89	249.35	176.58	179.90	251.85	0.130	-0.101	0.204	-0.283	-0.256	0.218	0.774513	1.000000	-
Rv2992c	gltX	19	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv2993c	-	9	7.35	14.08	6.63	4.14	6.82	6.66	-0.030	0.597	-0.117	-0.465	-0.093	-0.113	0.436112	1.000000	-
Rv2994	-	20	67.24	75.66	76.56	83.46	76.10	80.06	-0.174	-0.015	0.001	0.118	-0.007	0.061	0.949490	1.000000	-
Rv2995c	leuB	10	36.67	41.17	27.19	12.98	3.25	25.10	0.503	0.652	0.131	-0.709	-1.833	0.034	0.000508	0.013343	-
Rv2996c	serA1	11	16.24	16.23	14.44	27.49	40.40	12.99	-0.308	-0.309	-0.436	0.305	0.788	-0.548	0.003041	0.064543	-
Rv2997	-	16	125.59	134.99	145.04	124.19	141.12	96.67	-0.026	0.075	0.175	-0.041	0.136	-0.387	0.862492	1.000000	-
Rv2998	-	5	86.50	110.00	141.30	100.31	93.65	131.66	-0.337	-0.007	0.340	-0.134	-0.228	0.242	0.550045	1.000000	-
Rv2998A	-	2	20.77	15.52	34.40	39.33	32.95	7.78	-0.225	-0.554	0.387	0.557	0.333	-1.238	0.709608	1.000000	-
Rv2999	lppY	11	108.44	72.36	115.47	98.10	74.77	80.89	0.231	-0.321	0.317	0.093	-0.277	-0.171	0.816211	1.000000	-
Rv3000	-	8	79.39	96.65	118.78	104.03	75.76	85.87	-0.222	0.047	0.331	0.148	-0.285	-0.115	0.824887	1.000000	-
Rv3001c	ilvC	13	2.72	0.80	2.38	2.14	0.00	2.58	0.189	-0.223	0.125	0.077	-0.438	0.164	0.458104	1.000000	-
Rv3002c	ilvH	4	16.93	15.30	16.49	11.73	12.86	27.86	0.005	-0.107	-0.025	-0.386	-0.292	0.588	0.713294	1.000000	-
Rv3003c	ilvB1	15	8.72	9.95	8.29	23.58	10.63	11.17	-0.314	-0.191	-0.360	0.744	-0.126	-0.077	0.002458	0.053327	-
Rv3004	cfp6	4	101.66	42.09	77.26	72.75	41.71	47.76	0.631	-0.549	0.256	0.175	-0.560	-0.384	0.500945	1.000000	-
Rv3005c	-	21	104.94	113.23	127.93	128.51	129.02	105.04	-0.163	-0.058	0.111	0.117	0.123	-0.162	0.747455	1.000000	-
Rv3006	lppZ	16	0.96	1.87	1.18	0.00	2.55	1.60	-0.094	0.111	-0.041	-0.347	0.247	0.054	0.165238	1.000000	-
Rv3007c	-	9	113.61	131.80	128.65	126.71	141.32	157.53	-0.221	-0.015	-0.049	-0.070	0.082	0.233	0.825073	1.000000	-
Rv3008	-	18	181.51	220.89	188.74	185.30	199.09	210.84	-0.120	0.156	-0.065	-0.091	0.010	0.090	0.910424	1.000000	-
Rv3009c	gatB	20	2.43	1.79	1.72	5.29	7.26	6.32	-0.298	-0.428	-0.442	0.172	0.424	0.309	0.711262	1.000000	-
Rv3010c	pfkA	12	83.62	116.44	127.70	120.48	98.82	127.16	-0.405	0.049	0.177	0.096	-0.177	0.171	0.496770	1.000000	-
Rv3011c	gatA	23	1.14	0.44	1.10	1.46	1.73	1.79	-0.032	-0.205	-0.042	0.042	0.100	0.114	0.940794	1.000000	-
Rv3012c	gatC	0	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	TA sites <= 1
Rv3013	-	8	292.63	294.85	325.84	269.91	268.39	220.17	0.069	0.080	0.222	-0.045	-0.053	-0.333	0.635917	1.000000	-
Rv3014c	ligA	13	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv3015c	-	9	204.58	200.27	164.41	187.88	197.59	194.81	0.092	0.062	-0.215	-0.028	0.043	0.023	0.989686	1.000000	-
Rv3016	lpqA	11	65.00	61.44	63.14	65.20	71.45	82.65	-0.063	-0.139	-0.102	-0.059	0.064	0.261	0.972793	1.000000	-
Rv3017c	esxQ	10	193.28	190.19	198.13	153.85	190.08	209.91	0.030	0.007	0.065	-0.290	0.006	0.146	0.856194	1.000000	-
Rv3018c	PPE46	28	151.22	119.23	135.47	145.08	145.72	138.36	0.116	-0.215	-0.038	0.058	0.064	-0.008	0.986959	1.000000	-
Rv3018A	PE27A	0	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	TA sites <= 1
Rv3019c	esxR	9	20.67	30.06	27.78	30.08	29.66	43.77	-0.461	-0.012	-0.108	-0.011	-0.028	0.465	0.228237	1.000000	-
Rv3020c	esxS	8	72.39	73.26	76.71	55.01	56.29	85.80	0.047	0.063	0.125	-0.320	-0.290	0.278	0.852426	1.000000	-
Rv3021c	PPE47	22	83.71	63.07	78.77	68.79	84.56	65.37	0.166	-0.216	0.084	-0.099	0.180	-0.168	0.976641	1.000000	-
Rv3022c	PPE48	5	196.28	159.24	174.33	179.67	205.74	208.39	0.066	-0.227	-0.101	-0.058	0.132	0.150	0.984700	1.000000	-
Rv3022A	PE29	6	200.24	217.30	219.63	183.57	200.89	185.92	-0.007	0.108	0.123	-0.129	-0.003	-0.111	0.997550	1.000000	-
Rv3023c	-	16	254.99	247.77	271.71	252.30	251.31	243.49	0.008	-0.033	0.098	-0.007	-0.013	-0.058	0.997721	1.000000	-
Rv3024c	trmU	13	61.59	36.33	66.97	48.93	73.07	25.72	0.222	-0.466	0.334	-0.082	0.451	-0.895	0.025268	0.373182	-
Rv3025c	iscS	17	21.79	15.84	31.10	11.65	23.63	11.48	0.144	-0.219	0.574	-0.543	0.240	-0.557	0.053110	0.662219	-
Rv3026c	-	10	209.25	184.06	200.82	200.83	192.80	190.67	0.089	-0.091	0.031	0.031	-0.026	-0.042	0.999374	1.000000	-
Rv3027c	-	18	214.51	207.41	217.85	228.41	206.70	223.44	-0.012	-0.060	0.010	0.076	-0.065	0.045	0.990822	1.000000	-
Rv3028c	fixB	11	9.66	1.40	8.60	0.00	0.41	0.92	0.787	-0.409	0.678	-0.765	-0.652	-0.522	0.000001	0.000040	-
Rv3029c	fixA	8	10.40	0.00	10.61	0.00	0.00	0.68	0.838	-0.785	0.857	-0.785	-0.785	-0.602	0.000082	0.002476	-
Rv3030	-	11	20.45	25.34	3.44	8.42	15.01	12.26	0.410	0.664	-1.182	-0.513	0.063	-0.150	0.209160	1.000000	-
Rv3031	-	20	3.59	0.77	3.47	0.22	0.36	0.78	0.396	-0.178	0.375	-0.324	-0.284	-0.177	0.000527	0.013739	-
Rv3032	-	10	16.52	6.59	20.07	10.22	15.61	1.95	0.355	-0.537	0.575	-0.145	0.293	-1.276	0.079781	0.906913	-
Rv3033	-	3	86.55	84.92	66.93	88.22	72.18	92.75	0.075	0.049	-0.273	0.101	-0.171	0.169	0.997274	1.000000	-
Rv3034c	-	13	110.25	106.32	97.93	106.47	110.45	94.05	0.077	0.027	-0.086	0.029	0.080	-0.141	0.999715	1.000000	-
Rv3035	-	18	1.16	0.28	1.05	0.00	4.82	0.30	-0.024	-0.248	-0.051	-0.326	0.647	-0.242	0.000004	0.000173	-
Rv3036c	TB22.2	16	287.87	228.53	229.13	255.22	218.56	248.02	0.231	-0.096	-0.092	0.060	-0.159	0.020	0.816233	1.000000	-
Rv3037c	-	15	269.75	215.94	279.12	248.82	244.25	222.58	0.126	-0.188	0.175	0.012	-0.014	-0.146	0.831862	1.000000	-
Rv3038c	-	14	15.16	13.84	13.84	23.48	40.98	15.28	-0.335	-0.433	-0.432	0.163	0.854	-0.327	0.024530	0.365207	-
Rv3039c	echA17	10	61.24	73.76	90.38	85.63	80.87	73.93	-0.319	-0.069	0.207	0.133	0.055	-0.066	0.982488	1.000000	-
Rv3040c	-	13	86.64	109.01	115.63	99.62	120.18	112.57	-0.293	0.022	0.104	-0.102	0.157	0.066	0.923358	1.000000	-
Rv3041c	-	9	213.12	230.09	201.21	212.69	244.29	226.51	-0.053	0.055	-0.134	-0.056	0.139	0.033	0.996087	1.000000	-
Rv3042c	serB2	11	28.20	33.11	24.40	46.93	46.22	28.11	-0.250	-0.051	-0.426	0.395	0.375	-0.254	0.280616	1.000000	-
Rv3043c	ctaD	26	5.43	5.50	3.97	4.65	2.60	5.24	0.124	0.134	-0.092	0.013	-0.331	0.099	0.935670	1.000000	-
Rv3044	fecB	16	7.91	11.09	1.97	5.14	18.23	1.90	0.023	0.341	-0.867	-0.325	0.870	-0.881	0.000016	0.000566	-
Rv3045	adhC	20	140.13	167.41	151.14	136.65	146.87	139.27	-0.066	0.183	0.040	-0.101	-0.000	-0.074	0.815933	1.000000	-
Rv3046c	-	2	68.92	38.17	57.95	48.45	73.08	57.73	0.245	-0.531	0.013	-0.223	0.324	0.008	0.639210	1.000000	-
Rv3047c	-	5	135.05	169.82	108.86	165.03	144.21	130.04	-0.072	0.248	-0.370	0.208	0.020	-0.124	0.517535	1.000000	-
Rv3048c	nrdF	23	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv3049c	-	33	167.76	149.04	172.41	122.51	121.73	143.50	0.193	0.027	0.231	-0.245	-0.254	-0.026	0.055535	0.689467	-
Rv3050c	-	8	65.02	67.39	80.42	77.16	71.74	70.92	-0.139	-0.091	0.148	0.092	-0.007	-0.022	0.983714	1.000000	-
Rv3051c	nrdE	55	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv3052c	nrdI	14	19.24	22.85	29.98	4.53	0.00	34.95	0.039	0.239	0.568	-1.308	-2.238	0.760	0.000000	0.000006	-
Rv3053c	nrdH	8	0.00	1.31	0.00	0.00	0.00	0.00	-0.061	0.273	-0.061	-0.061	-0.061	-0.061	0.308863	1.000000	-
Rv3054c	-	6	232.94	250.15	307.74	258.56	253.68	299.25	-0.193	-0.093	0.201	-0.046	-0.073	0.161	0.949001	1.000000	-
Rv3055	-	7	125.33	168.60	156.88	177.66	171.86	121.15	-0.283	0.131	0.030	0.204	0.157	-0.330	0.448332	1.000000	-
Rv3056	dinP	20	203.47	215.63	214.53	216.51	204.25	190.18	-0.027	0.055	0.047	0.060	-0.022	-0.122	0.979408	1.000000	-
Rv3057c	-	18	117.39	181.73	164.91	243.24	257.63	141.83	-0.630	-0.021	-0.157	0.390	0.471	-0.368	0.000138	0.004093	-
Rv3058c	-	9	142.95	163.18	138.60	135.77	119.20	150.76	0.012	0.197	-0.031	-0.060	-0.241	0.086	0.965143	1.000000	-
Rv3059	cyp136	24	208.33	190.63	194.66	184.05	190.22	215.00	0.078	-0.047	-0.018	-0.097	-0.050	0.122	0.954210	1.000000	-
Rv3060c	-	24	139.90	142.21	140.20	146.77	151.30	149.84	-0.050	-0.027	-0.047	0.017	0.059	0.045	0.996626	1.000000	-
Rv3061c	fadE22	23	150.79	150.99	166.58	162.08	157.46	145.96	-0.044	-0.042	0.095	0.057	0.016	-0.090	0.980056	1.000000	-
Rv3062	ligB	20	148.12	145.68	163.41	131.26	107.46	135.42	0.093	0.070	0.230	-0.075	-0.352	-0.032	0.631765	1.000000	-
Rv3063	cstA	30	214.07	219.32	205.01	212.96	206.95	217.70	0.009	0.043	-0.052	0.002	-0.038	0.033	0.997892	1.000000	-
Rv3064c	-	9	72.97	81.94	67.10	84.41	75.53	97.46	-0.123	0.034	-0.236	0.075	-0.076	0.271	0.899627	1.000000	-
Rv3065	mmr	9	150.66	125.55	135.97	117.58	121.42	113.30	0.233	-0.020	0.090	-0.111	-0.067	-0.163	0.872233	1.000000	-
Rv3066	-	10	179.38	175.86	147.53	98.25	111.03	179.77	0.263	0.235	-0.010	-0.573	-0.405	0.266	0.106481	1.000000	-
Rv3067	-	8	92.56	94.62	84.09	76.86	101.97	80.37	0.063	0.093	-0.068	-0.191	0.196	-0.130	0.683192	1.000000	-
Rv3068c	pgmA	32	179.12	162.92	159.89	170.44	150.76	176.60	0.101	-0.031	-0.058	0.032	-0.140	0.082	0.873364	1.000000	-
Rv3069	ccrB	6	58.57	34.12	47.50	59.63	50.53	47.70	0.218	-0.483	-0.059	0.241	0.022	-0.053	0.886288	1.000000	-
Rv3070	ccrB	9	143.11	133.20	153.31	154.37	136.06	109.42	0.048	-0.052	0.144	0.154	-0.022	-0.324	0.936275	1.000000	-
Rv3071	-	16	97.25	101.63	112.46	98.91	79.50	103.19	-0.022	0.039	0.178	0.001	-0.297	0.059	0.792898	1.000000	-
Rv3072c	-	9	116.64	82.74	94.74	96.83	102.69	74.34	0.288	-0.184	0.001	0.031	0.112	-0.329	0.713274	1.000000	-
Rv3073c	-	4	197.62	149.86	178.62	164.69	180.23	192.38	0.153	-0.235	0.011	-0.103	0.024	0.115	0.977166	1.000000	-
Rv3074	-	15	172.73	186.87	196.19	179.76	161.66	160.74	-0.029	0.082	0.150	0.027	-0.122	-0.130	0.908966	1.000000	-
Rv3075c	-	16	190.70	163.74	153.51	148.70	149.89	161.97	0.234	0.020	-0.070	-0.115	-0.104	0.005	0.872988	1.000000	-
Rv3076	-	5	135.05	154.10	120.66	91.88	100.50	110.13	0.179	0.363	0.022	-0.353	-0.230	-0.104	0.806845	1.000000	-
Rv3077	-	37	176.97	155.19	163.36	168.88	161.45	151.75	0.116	-0.068	0.004	0.050	-0.013	-0.099	0.975549	1.000000	-
Rv3078	hab	6	59.18	51.52	82.98	69.59	60.61	95.55	-0.223	-0.406	0.232	-0.006	-0.191	0.425	0.132303	1.000000	-
Rv3079c	-	17	108.73	97.65	86.03	92.10	102.16	104.96	0.134	-0.013	-0.187	-0.093	0.049	0.086	0.972444	1.000000	-
Rv3080c	pknK	32	150.76	138.50	138.17	142.69	136.02	130.53	0.109	-0.009	-0.013	0.032	-0.035	-0.092	0.940429	1.000000	-
Rv3081	-	18	64.07	68.77	73.35	74.64	55.05	61.64	-0.045	0.050	0.137	0.161	-0.247	-0.097	0.794381	1.000000	-
Rv3082c	virS	19	157.37	144.50	149.44	117.88	107.72	135.95	0.209	0.090	0.137	-0.193	-0.318	0.005	0.554369	1.000000	-
Rv3083	-	26	151.53	152.11	170.19	148.48	155.26	143.27	-0.018	-0.012	0.145	-0.046	0.016	-0.096	0.949265	1.000000	-
Rv3084	lipR	14	123.03	102.69	120.11	122.29	127.55	110.52	0.061	-0.188	0.028	0.053	0.111	-0.087	0.922103	1.000000	-
Rv3085	-	4	80.53	82.95	114.12	88.67	51.45	108.73	-0.117	-0.077	0.361	0.014	-0.716	0.294	0.587847	1.000000	-
Rv3086	adhD	11	94.68	114.04	110.78	105.07	106.48	112.56	-0.172	0.084	0.044	-0.029	-0.010	0.066	0.993786	1.000000	-
Rv3087	-	14	290.43	248.69	241.12	264.27	207.51	250.12	0.210	-0.009	-0.053	0.077	-0.265	-0.001	0.353914	1.000000	-
Rv3088	-	13	122.18	111.43	139.66	112.58	148.26	125.11	-0.049	-0.176	0.137	-0.162	0.220	-0.016	0.669469	1.000000	-
Rv3089	fadD13	22	135.77	117.25	135.72	131.58	139.24	112.29	0.075	-0.129	0.074	0.031	0.110	-0.188	0.897093	1.000000	-
Rv3090	-	9	161.35	163.95	140.56	171.95	168.23	190.39	-0.040	-0.018	-0.233	0.049	0.018	0.192	0.924014	1.000000	-
Rv3091	-	15	231.05	201.63	235.90	242.41	220.64	223.66	0.032	-0.160	0.061	0.100	-0.033	-0.014	0.935605	1.000000	-
Rv3092c	-	9	397.60	371.72	418.76	395.23	336.33	362.48	0.063	-0.033	0.137	0.055	-0.175	-0.069	0.963838	1.000000	-
Rv3093c	-	17	185.42	170.01	207.70	169.40	172.56	175.61	0.041	-0.081	0.200	-0.086	-0.060	-0.036	0.964050	1.000000	-
Rv3094c	-	11	292.28	230.73	279.53	236.15	254.29	240.07	0.190	-0.144	0.127	-0.111	-0.007	-0.088	0.831010	1.000000	-
Rv3095	-	8	223.93	243.41	209.82	261.14	209.40	274.87	-0.081	0.037	-0.172	0.137	-0.175	0.209	0.804732	1.000000	-
Rv3096	-	15	237.74	275.62	221.47	236.35	247.30	248.97	-0.040	0.169	-0.140	-0.048	0.016	0.025	0.987329	1.000000	-
Rv3097c	PE_PGRS63	28	155.82	154.82	147.25	153.30	155.84	173.94	-0.009	-0.018	-0.088	-0.032	-0.009	0.145	0.971004	1.000000	-
Rv3098c	-	8	116.17	122.00	120.72	113.45	107.05	128.86	-0.022	0.046	0.031	-0.055	-0.135	0.122	0.993877	1.000000	-
Rv3099c	-	6	286.22	304.81	338.06	335.85	297.69	348.26	-0.152	-0.062	0.085	0.075	-0.096	0.127	0.896776	1.000000	-
Rv3100c	smpB	4	5.19	7.65	1.57	4.62	5.86	3.70	0.062	0.373	-0.571	-0.022	0.154	-0.167	0.890414	1.000000	-
Rv3101c	ftsX	18	22.53	33.69	26.70	45.12	41.49	28.28	-0.464	0.027	-0.260	0.401	0.292	-0.190	0.168290	1.000000	-
Rv3102c	ftsE	8	44.72	50.73	53.55	45.53	60.25	41.10	-0.127	0.037	0.108	-0.104	0.265	-0.237	0.927919	1.000000	-
Rv3103c	-	7	54.76	52.25	58.59	55.39	63.68	62.12	-0.071	-0.133	0.018	-0.057	0.129	0.096	0.994051	1.000000	-
Rv3104c	-	11	206.23	196.09	224.99	191.78	244.09	190.18	-0.018	-0.089	0.105	-0.120	0.220	-0.132	0.914008	1.000000	-
Rv3105c	prfB	17	7.96	8.99	9.75	14.27	11.83	14.73	-0.327	-0.217	-0.140	0.245	0.050	0.280	0.956927	1.000000	-
Rv3106	fprA	18	141.28	152.38	151.94	154.16	157.33	136.33	-0.073	0.032	0.028	0.048	0.077	-0.123	0.986622	1.000000	-
Rv3107c	agpS	22	97.82	87.83	99.71	88.98	103.67	96.70	0.029	-0.119	0.055	-0.101	0.109	0.013	0.935357	1.000000	-
Rv3108	-	7	57.54	63.56	61.21	67.76	72.44	63.94	-0.150	-0.018	-0.068	0.068	0.158	-0.010	0.986799	1.000000	-
Rv3109	moaA1	41	26.62	24.31	30.80	40.89	39.62	40.77	-0.296	-0.406	-0.117	0.241	0.200	0.237	0.092243	1.000000	-
Rv3110	moaB1	9	94.56	91.85	93.10	104.95	106.88	107.28	-0.074	-0.113	-0.095	0.070	0.095	0.100	0.993310	1.000000	-
Rv3111	moaC	13	7.21	4.31	4.32	4.36	7.36	8.56	0.148	-0.244	-0.241	-0.236	0.166	0.299	0.449269	1.000000	-
Rv3112	moaD1	7	13.62	16.77	13.85	27.44	21.16	22.94	-0.384	-0.158	-0.366	0.417	0.107	0.201	0.787499	1.000000	-
Rv3113	-	8	33.26	47.43	35.12	37.69	43.99	37.22	-0.206	0.249	-0.137	-0.047	0.151	-0.063	0.887155	1.000000	-
Rv3114	-	8	63.64	52.38	72.26	88.31	62.38	35.81	0.025	-0.234	0.196	0.468	-0.002	-0.725	0.107364	1.000000	-
Rv3115	-	16	245.44	246.56	274.90	259.62	237.54	234.02	-0.024	-0.018	0.136	0.055	-0.070	-0.092	0.981770	1.000000	-
Rv3116	moeB2	28	101.62	111.09	99.15	104.26	95.65	119.56	-0.048	0.075	-0.082	-0.013	-0.131	0.176	0.890978	1.000000	-
Rv3117	cysA3	15	155.63	197.11	170.79	191.94	185.79	193.14	-0.222	0.109	-0.092	0.072	0.026	0.080	0.981354	1.000000	-
Rv3118	sseC1	2	277.61	318.27	282.99	329.71	316.60	204.43	-0.053	0.141	-0.026	0.191	0.133	-0.486	0.582125	1.000000	-
Rv3119	moaE1	12	95.52	102.89	107.52	108.32	112.35	111.33	-0.147	-0.045	0.015	0.026	0.076	0.064	0.903064	1.000000	-
Rv3120	-	9	64.57	70.52	72.96	71.49	62.05	82.70	-0.122	-0.004	0.042	0.015	-0.175	0.212	0.976467	1.000000	-
Rv3121	cyp141	26	90.72	101.70	84.89	88.84	90.80	91.70	-0.011	0.146	-0.101	-0.039	-0.010	0.004	0.994798	1.000000	-
Rv3122	-	7	364.38	316.47	343.60	377.35	342.41	342.31	0.066	-0.134	-0.017	0.116	-0.022	-0.022	0.995719	1.000000	-
Rv3123	-	4	194.75	241.93	183.96	199.21	159.33	158.79	0.037	0.343	-0.043	0.069	-0.244	-0.249	0.909180	1.000000	-
Rv3124	-	30	37.81	44.12	51.58	47.02	56.24	56.27	-0.331	-0.132	0.072	-0.050	0.186	0.186	0.442462	1.000000	-
Rv3125c	PPE49	21	142.02	119.52	135.50	125.26	133.72	125.84	0.120	-0.120	0.054	-0.055	0.036	-0.048	0.982728	1.000000	-
Rv3126c	-	3	61.46	32.13	55.06	59.85	43.57	69.64	0.181	-0.659	0.035	0.146	-0.271	0.349	0.723218	1.000000	-
Rv3127	-	18	37.13	37.20	35.43	36.03	30.20	42.84	0.023	0.025	-0.037	-0.016	-0.236	0.206	0.987733	1.000000	-
Rv3129	-	4	51.97	20.50	46.04	55.74	70.76	36.55	0.134	-1.026	-0.025	0.226	0.545	-0.322	0.461657	1.000000	-
Rv3130c	-	27	125.45	87.94	115.87	124.76	94.37	102.58	0.201	-0.288	0.091	0.193	-0.192	-0.077	0.400953	1.000000	-
Rv3131	-	15	63.28	51.00	88.85	61.97	52.56	58.62	0.012	-0.274	0.471	-0.016	-0.234	-0.090	0.492072	1.000000	-
Rv3132c	devS	31	80.11	68.97	95.06	81.26	71.75	63.10	0.059	-0.144	0.292	0.078	-0.090	-0.263	0.463709	1.000000	-
Rv3133c	devR	12	164.14	113.01	164.28	138.43	139.83	142.91	0.185	-0.334	0.186	-0.053	-0.039	-0.008	0.548170	1.000000	-
Rv3134c	-	9	117.06	101.25	109.58	127.23	116.62	127.13	0.007	-0.193	-0.084	0.122	0.002	0.121	0.932724	1.000000	-
Rv3135	PPE50	9	184.77	171.90	190.25	152.35	147.08	166.93	0.126	0.025	0.167	-0.144	-0.193	-0.016	0.788932	1.000000	-
Rv3136	PPE51	21	44.72	47.91	44.85	32.14	44.45	42.01	0.060	0.150	0.064	-0.360	0.053	-0.020	0.759419	1.000000	-
Rv3137	-	8	0.48	0.00	0.79	0.00	0.91	0.00	0.032	-0.101	0.110	-0.101	0.139	-0.101	0.637378	1.000000	-
Rv3138	pflA	21	76.93	73.64	88.68	74.73	76.17	93.05	-0.062	-0.121	0.131	-0.101	-0.076	0.197	0.848603	1.000000	-
Rv3139	fadE24	22	80.15	35.26	80.86	11.30	26.14	22.03	0.838	-0.242	0.850	-1.547	-0.613	-0.817	0.000000	0.000000	-
Rv3140	fadE23	19	31.70	16.28	51.74	4.25	8.36	11.05	0.522	-0.265	1.150	-1.466	-0.936	-0.672	0.000000	0.000000	-
Rv3141	fadB4	16	89.76	111.48	111.91	109.04	101.14	121.46	-0.247	0.051	0.056	0.020	-0.083	0.169	0.494824	1.000000	-
Rv3142c	-	11	56.93	67.40	59.58	55.72	54.45	46.81	0.003	0.228	0.063	-0.026	-0.056	-0.255	0.987497	1.000000	-
Rv3143	-	4	5.13	1.25	1.57	3.63	8.80	8.94	0.035	-0.662	-0.589	-0.196	0.481	0.495	0.375592	1.000000	-
Rv3144c	PPE52	17	266.32	259.62	236.59	272.63	248.36	238.49	0.069	0.033	-0.099	0.102	-0.030	-0.087	0.976214	1.000000	-
Rv3145	nuoA	12	299.72	288.29	306.75	323.02	281.39	261.62	0.030	-0.025	0.063	0.136	-0.060	-0.163	0.968088	1.000000	-
Rv3146	nuoB	9	185.07	172.36	141.01	197.42	173.31	158.39	0.109	0.009	-0.272	0.200	0.017	-0.109	0.947627	1.000000	-
Rv3147	nuoC	14	116.82	116.41	104.50	113.25	118.13	112.54	0.039	0.034	-0.115	-0.004	0.054	-0.013	0.998382	1.000000	-
Rv3148	nuoD	22	36.51	37.68	31.54	34.17	36.41	35.76	0.041	0.081	-0.143	-0.043	0.037	0.015	0.990132	1.000000	-
Rv3149	nuoE	9	299.26	281.62	325.79	301.96	255.04	221.81	0.090	0.004	0.210	0.102	-0.137	-0.334	0.715948	1.000000	-
Rv3150	nuoF	25	150.13	129.58	143.09	129.47	130.95	127.31	0.147	-0.058	0.080	-0.059	-0.043	-0.082	0.881093	1.000000	-
Rv3151	nuoG	30	100.80	74.84	104.73	101.55	96.82	83.50	0.100	-0.306	0.153	0.110	0.045	-0.157	0.425919	1.000000	-
Rv3152	nuoH	27	100.36	99.94	98.99	108.19	107.91	110.03	-0.052	-0.058	-0.071	0.051	0.048	0.075	0.956428	1.000000	-
Rv3153	nuoI	23	170.94	159.95	152.71	137.99	149.86	132.86	0.176	0.083	0.018	-0.123	-0.008	-0.176	0.812513	1.000000	-
Rv3154	nuoJ	10	171.11	156.02	153.55	159.25	152.15	117.11	0.170	0.041	0.019	0.069	0.006	-0.358	0.489650	1.000000	-
Rv3155	nuoK	6	43.61	59.37	47.89	36.53	59.50	47.71	-0.155	0.251	-0.033	-0.381	0.254	-0.038	0.451535	1.000000	-
Rv3156	nuoL	35	110.57	123.94	120.38	120.79	111.55	108.48	-0.066	0.092	0.052	0.057	-0.054	-0.092	0.958017	1.000000	-
Rv3157	nuoM	33	78.32	64.38	77.78	62.11	63.96	65.07	0.179	-0.085	0.170	-0.133	-0.094	-0.071	0.709163	1.000000	-
Rv3158	nuoN	32	235.15	213.46	208.10	219.68	220.24	201.62	0.117	-0.019	-0.055	0.021	0.025	-0.100	0.874624	1.000000	-
Rv3159c	PPE53	26	144.94	132.86	104.31	118.50	96.00	113.41	0.282	0.161	-0.174	0.002	-0.288	-0.059	0.882947	1.000000	-
Rv3160c	-	7	41.36	43.58	22.36	19.48	18.95	49.79	0.303	0.370	-0.458	-0.619	-0.650	0.544	0.365170	1.000000	-
Rv3161c	-	24	117.80	150.00	133.99	138.32	124.45	135.62	-0.172	0.164	0.007	0.051	-0.096	0.023	0.923800	1.000000	-
Rv3162c	-	6	129.58	137.59	107.34	135.06	141.63	164.95	-0.067	0.016	-0.328	-0.010	0.056	0.269	0.989387	1.000000	-
Rv3163c	-	15	190.71	156.96	151.73	166.73	164.00	158.26	0.205	-0.068	-0.115	0.017	-0.006	-0.056	0.966668	1.000000	-
Rv3164c	moxR3	12	118.48	96.37	87.74	91.72	81.42	85.42	0.326	0.041	-0.087	-0.027	-0.189	-0.124	0.697815	1.000000	-
Rv3165c	-	6	32.93	35.01	18.84	27.29	37.63	34.31	0.075	0.152	-0.595	-0.157	0.244	0.127	0.389554	1.000000	-
Rv3166c	-	16	148.95	134.31	148.18	148.55	121.68	174.62	0.027	-0.117	0.020	0.024	-0.254	0.250	0.735647	1.000000	-
Rv3167c	-	10	124.98	144.41	119.62	134.54	129.11	114.72	-0.032	0.169	-0.093	0.070	0.013	-0.151	0.976667	1.000000	-
Rv3168	-	19	73.18	74.15	99.78	71.49	86.63	77.98	-0.130	-0.112	0.293	-0.161	0.099	-0.044	0.608788	1.000000	-
Rv3169	-	19	61.59	71.00	61.18	75.73	67.14	55.32	-0.079	0.112	-0.088	0.199	0.037	-0.222	0.984114	1.000000	-
Rv3170	aofH	18	76.84	68.54	85.51	94.84	81.51	75.08	-0.061	-0.216	0.084	0.226	0.019	-0.093	0.947245	1.000000	-
Rv3171c	hpx	13	229.10	216.85	185.62	193.06	174.61	177.99	0.218	0.141	-0.078	-0.023	-0.164	-0.137	0.906431	1.000000	-
Rv3172c	-	17	49.64	65.78	50.91	51.84	46.87	60.46	-0.117	0.256	-0.084	-0.060	-0.192	0.144	0.713166	1.000000	-
Rv3173c	-	8	87.34	88.56	93.60	90.19	87.07	77.98	-0.002	0.017	0.093	0.042	-0.006	-0.156	0.997226	1.000000	-
Rv3174	-	13	144.90	113.02	147.99	130.96	121.99	133.96	0.128	-0.217	0.158	-0.012	-0.111	0.019	0.912435	1.000000	-
Rv3175	-	21	162.30	142.14	159.72	120.71	142.88	137.20	0.166	-0.020	0.143	-0.247	-0.012	-0.069	0.845195	1.000000	-
Rv3176c	mesT	14	167.44	194.46	162.65	185.66	186.88	163.77	-0.076	0.134	-0.117	0.069	0.078	-0.107	0.939907	1.000000	-
Rv3177	-	8	43.71	57.42	41.37	42.36	47.38	54.23	-0.115	0.243	-0.186	-0.155	-0.010	0.167	0.784147	1.000000	-
Rv3178	-	7	40.88	55.33	63.00	38.72	48.99	63.47	-0.306	0.089	0.261	-0.376	-0.072	0.271	0.630778	1.000000	-
Rv3179	-	14	198.43	222.31	207.05	214.53	215.98	224.96	-0.106	0.055	-0.046	0.004	0.014	0.071	0.971789	1.000000	-
Rv3180c	-	6	156.86	167.55	158.95	154.29	148.31	136.24	0.028	0.121	0.047	0.005	-0.050	-0.168	0.988951	1.000000	-
Rv3181c	-	6	58.27	39.70	35.94	42.28	28.40	25.83	0.544	0.042	-0.084	0.124	-0.378	-0.494	0.748577	1.000000	-
Rv3182	-	1	51.14	61.20	25.25	78.87	81.20	51.40	-0.170	0.067	-1.062	0.409	0.448	-0.164	1.000000	1.000000	TA sites <= 1
Rv3183	-	3	284.89	252.60	272.96	196.27	220.19	205.79	0.250	0.080	0.189	-0.276	-0.114	-0.210	0.830922	1.000000	-
Rv3184	-	4	208.18	253.08	256.75	252.77	248.67	187.78	-0.168	0.108	0.128	0.106	0.083	-0.313	0.830780	1.000000	-
Rv3185	-	25	292.31	301.23	322.53	309.62	301.76	302.72	-0.060	-0.018	0.079	0.021	-0.015	-0.011	0.992206	1.000000	-
Rv3186	-	4	193.22	238.41	184.93	252.44	222.16	169.54	-0.118	0.178	-0.180	0.259	0.079	-0.302	0.730202	1.000000	-
Rv3187	-	25	278.10	301.67	340.74	317.03	285.19	293.08	-0.120	-0.005	0.168	0.066	-0.084	-0.046	0.779316	1.000000	-
Rv3188	-	7	102.38	162.10	128.85	106.39	125.53	126.91	-0.280	0.358	0.038	-0.227	0.002	0.017	0.548624	1.000000	-
Rv3189	-	8	194.28	134.32	154.11	144.25	156.83	162.85	0.292	-0.224	-0.033	-0.125	-0.008	0.044	0.851647	1.000000	-
Rv3190c	-	23	167.99	180.58	160.15	146.44	164.34	188.32	0.000	0.101	-0.067	-0.192	-0.031	0.161	0.840358	1.000000	-
Rv3191c	-	19	131.36	148.76	128.98	151.25	149.63	162.07	-0.141	0.032	-0.166	0.056	0.041	0.152	0.592023	1.000000	-
Rv3192	-	4	171.95	192.76	159.75	158.43	168.61	196.40	-0.022	0.139	-0.125	-0.137	-0.049	0.165	0.949013	1.000000	-
Rv3193c	-	82	19.98	33.42	23.86	40.14	49.03	28.80	-0.588	0.034	-0.379	0.266	0.525	-0.151	0.000000	0.000000	-
Rv3194c	-	15	189.57	165.38	173.41	199.38	172.43	171.51	0.084	-0.108	-0.041	0.155	-0.049	-0.057	0.899848	1.000000	-
Rv3195	-	17	155.86	142.95	139.79	150.10	151.39	161.16	0.052	-0.069	-0.100	-0.001	0.011	0.098	0.985835	1.000000	-
Rv3196	-	9	258.07	183.87	211.48	247.86	234.82	243.34	0.163	-0.315	-0.118	0.106	0.030	0.080	0.890363	1.000000	-
Rv3196A	-	1	376.08	326.80	371.59	333.11	324.10	302.86	0.147	-0.052	0.130	-0.025	-0.064	-0.160	1.000000	1.000000	TA sites <= 1
Rv3197	-	19	163.14	132.28	139.44	140.72	141.86	141.52	0.183	-0.110	-0.037	-0.024	-0.013	-0.016	0.879003	1.000000	-
Rv3197A	whiB7	4	140.21	163.72	119.13	173.46	150.53	155.23	-0.098	0.119	-0.324	0.200	0.001	0.044	0.992872	1.000000	-
Rv3198c	uvrD2	35	21.38	28.03	17.09	21.96	27.72	22.75	-0.094	0.230	-0.350	-0.062	0.217	-0.021	0.923751	1.000000	-
Rv3198A	-	6	286.53	330.50	259.77	365.35	325.87	294.70	-0.114	0.089	-0.253	0.231	0.069	-0.074	0.906807	1.000000	-
Rv3199c	nudC	8	312.48	369.32	318.03	330.46	278.59	267.73	-0.001	0.236	0.024	0.078	-0.164	-0.221	0.943729	1.000000	-
Rv3200c	-	16	120.96	153.05	112.50	128.54	147.80	133.43	-0.129	0.199	-0.229	-0.044	0.150	0.007	0.880724	1.000000	-
Rv3201c	-	48	153.64	127.79	132.58	159.41	140.06	144.08	0.101	-0.156	-0.105	0.152	-0.028	0.011	0.619619	1.000000	-
Rv3202c	-	30	300.56	298.07	281.72	302.90	300.94	279.35	0.032	0.020	-0.060	0.043	0.033	-0.072	0.994530	1.000000	-
Rv3203	lipV	12	80.36	96.50	67.30	82.67	80.60	93.78	-0.053	0.197	-0.292	-0.014	-0.049	0.158	0.785636	1.000000	-
Rv3204	-	4	136.90	123.65	153.13	109.06	120.01	154.82	0.041	-0.100	0.197	-0.274	-0.142	0.213	0.725374	1.000000	-
Rv3205c	-	14	55.43	99.01	55.54	89.84	126.74	84.86	-0.578	0.205	-0.576	0.072	0.546	-0.006	0.014726	0.244827	-
Rv3206c	moeB1	24	7.48	7.45	10.01	9.37	11.28	11.60	-0.219	-0.223	0.047	-0.016	0.164	0.192	0.995227	1.000000	-
Rv3207c	-	17	196.41	189.86	189.79	188.53	204.36	200.08	0.011	-0.036	-0.037	-0.046	0.067	0.037	0.999751	1.000000	-
Rv3208	-	10	0.00	0.00	0.63	3.66	4.70	1.48	-0.432	-0.432	-0.261	0.361	0.523	-0.058	0.148674	1.000000	-
Rv3208A	TB9.4	5	104.17	128.26	57.02	152.17	126.96	100.08	-0.093	0.195	-0.909	0.433	0.180	-0.148	0.000972	0.023217	-
Rv3209	-	9	282.61	284.51	298.57	280.90	277.26	252.82	0.016	0.025	0.094	0.007	-0.011	-0.142	0.997515	1.000000	-
Rv3210c	-	10	11.57	27.51	10.61	18.75	17.61	26.76	-0.523	0.450	-0.609	-0.003	-0.074	0.416	0.023687	0.357991	-
Rv3211	rhlE	24	102.30	105.79	96.57	78.05	76.25	93.24	0.145	0.191	0.066	-0.224	-0.256	0.018	0.435129	1.000000	-
Rv3212	-	21	15.64	35.54	13.68	18.18	17.11	24.89	-0.324	0.650	-0.468	-0.157	-0.225	0.210	0.103126	1.000000	-
Rv3213c	-	12	189.64	269.68	226.46	244.86	215.20	207.47	-0.244	0.253	0.006	0.116	-0.066	-0.118	0.707853	1.000000	-
Rv3214	gpm2	11	23.85	51.94	47.43	61.77	66.28	39.93	-0.892	0.089	-0.030	0.319	0.413	-0.253	0.039382	0.523783	-
Rv3215	entC	16	17.99	22.23	45.03	130.99	96.98	14.80	-1.376	-1.132	-0.254	1.188	0.773	-1.591	0.000000	0.000000	-
Rv3216	-	6	312.51	199.71	238.18	224.00	223.46	234.28	0.382	-0.251	-0.003	-0.090	-0.093	-0.026	0.387227	1.000000	-
Rv3217c	-	3	218.45	238.03	269.91	257.06	225.54	217.16	-0.119	0.002	0.180	0.111	-0.074	-0.128	0.710089	1.000000	-
Rv3218	-	18	95.22	123.08	108.51	117.04	122.72	101.31	-0.215	0.139	-0.035	0.069	0.135	-0.130	0.926789	1.000000	-
Rv3219	whiB1	4	0.00	6.29	1.57	0.00	16.93	0.00	-0.869	0.306	-0.474	-0.869	1.264	-0.869	0.060544	0.738750	-
Rv3220c	-	21	257.22	150.97	252.11	124.95	139.02	199.62	0.447	-0.302	0.419	-0.566	-0.417	0.089	0.000000	0.000002	-
Rv3221c	TB7.3	2	0.00	0.00	3.15	0.00	0.00	0.00	-0.144	-0.144	0.561	-0.144	-0.144	-0.144	0.317206	1.000000	-
Rv3221A	-	2	0.00	7.57	3.15	2.17	2.25	7.40	-0.809	0.522	-0.104	-0.289	-0.272	0.502	0.372987	1.000000	-
Rv3222c	-	7	0.00	0.00	0.00	0.69	0.00	0.00	-0.033	-0.033	-0.033	0.153	-0.033	-0.033	0.607960	1.000000	-
Rv3223c	sigH	15	115.94	173.28	108.62	145.76	171.42	168.87	-0.333	0.227	-0.423	-0.015	0.212	0.191	0.019758	0.310992	-
Rv3224	-	16	190.18	160.75	185.28	183.46	172.05	162.02	0.112	-0.124	0.075	0.061	-0.029	-0.113	0.992142	1.000000	-
Rv3224A	-	3	17.32	20.53	11.47	13.91	21.05	17.10	0.028	0.222	-0.411	-0.212	0.251	0.013	0.907287	1.000000	-
Rv3224B	-	3	156.84	130.68	143.54	185.98	163.22	166.12	-0.008	-0.262	-0.132	0.231	0.048	0.073	0.866812	1.000000	-
Rv3225c	-	28	243.91	259.76	247.32	239.50	227.61	254.04	-0.008	0.081	0.011	-0.034	-0.106	0.049	0.980917	1.000000	-
Rv3226c	-	6	277.22	223.72	260.65	216.34	205.27	243.13	0.217	-0.086	0.130	-0.133	-0.207	0.032	0.957473	1.000000	-
Rv3227	aroA	8	0.00	1.27	0.00	3.50	0.56	0.00	-0.236	0.092	-0.236	0.529	-0.082	-0.236	0.157222	1.000000	-
Rv3228	-	9	43.32	59.83	40.40	71.46	68.28	41.44	-0.291	0.133	-0.381	0.371	0.310	-0.348	0.177980	1.000000	-
Rv3229c	-	24	74.20	100.45	57.26	61.54	58.92	80.11	0.039	0.452	-0.308	-0.212	-0.270	0.143	0.032755	0.458570	-
Rv3230c	-	16	61.52	101.84	54.82	44.70	60.83	63.25	-0.063	0.620	-0.216	-0.484	-0.078	-0.026	0.029170	0.415679	-
Rv3231c	-	6	415.50	358.45	392.51	303.40	273.54	318.33	0.270	0.060	0.189	-0.177	-0.324	-0.109	0.477783	1.000000	-
Rv3232c	pvdS	24	298.95	325.14	301.46	326.84	316.52	323.95	-0.076	0.043	-0.065	0.050	0.005	0.038	0.965910	1.000000	-
Rv3233c	-	12	217.04	177.77	193.79	175.69	177.71	211.85	0.170	-0.110	0.011	-0.127	-0.111	0.136	0.865968	1.000000	-
Rv3234c	-	18	185.70	213.26	194.91	211.75	191.64	200.66	-0.102	0.093	-0.034	0.083	-0.058	0.007	0.983070	1.000000	-
Rv3235	-	6	107.47	101.54	114.02	112.91	116.98	102.72	-0.023	-0.101	0.059	0.045	0.094	-0.085	0.999523	1.000000	-
Rv3236c	-	14	74.04	89.06	78.40	73.89	77.59	84.00	-0.096	0.155	-0.019	-0.099	-0.033	0.075	0.995375	1.000000	-
Rv3237c	-	9	174.31	172.46	162.92	160.26	145.72	178.72	0.071	0.056	-0.024	-0.047	-0.180	0.106	0.984204	1.000000	-
Rv3238c	-	22	157.85	177.93	150.36	156.53	160.14	174.91	-0.045	0.123	-0.112	-0.056	-0.024	0.099	0.939032	1.000000	-
Rv3239c	-	56	241.79	223.91	224.75	219.80	214.15	218.27	0.109	0.001	0.006	-0.025	-0.062	-0.035	0.978184	1.000000	-
Rv3240c	secA1	46	12.14	13.29	11.47	14.85	15.61	11.35	-0.080	0.014	-0.138	0.132	0.186	-0.149	0.995352	1.000000	-
Rv3241c	-	12	252.53	292.82	239.82	287.20	274.17	268.04	-0.090	0.120	-0.163	0.092	0.026	-0.006	0.851630	1.000000	-
Rv3242c	-	4	227.52	258.22	192.26	232.40	248.94	195.62	0.011	0.189	-0.227	0.040	0.138	-0.202	0.966453	1.000000	-
Rv3243c	-	4	175.09	118.30	137.77	142.12	142.03	199.38	0.194	-0.353	-0.141	-0.098	-0.099	0.376	0.795454	1.000000	-
Rv3244c	lpqB	21	0.37	0.25	0.00	0.00	0.00	0.51	0.049	0.016	-0.053	-0.053	-0.053	0.088	0.328273	1.000000	-
Rv3245c	mtrB	20	0.19	1.27	0.31	0.00	1.54	0.00	-0.096	0.175	-0.063	-0.151	0.235	-0.151	0.024116	0.360378	-
Rv3246c	mtrA	11	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv3247c	tmk	10	13.60	7.63	7.80	14.49	12.64	5.61	0.282	-0.276	-0.257	0.350	0.205	-0.528	0.889160	1.000000	-
Rv3248c	sahH	24	0.00	0.41	0.00	0.21	0.68	0.00	-0.061	0.054	-0.061	-0.003	0.122	-0.061	0.321428	1.000000	-
Rv3249c	-	13	83.06	129.14	85.41	126.77	137.77	91.91	-0.373	0.235	-0.335	0.209	0.325	-0.234	0.661643	1.000000	-
Rv3250c	rubB	3	191.68	219.16	214.66	207.80	177.49	189.24	-0.060	0.129	0.100	0.054	-0.168	-0.078	0.985881	1.000000	-
Rv3251c	rubA	4	216.38	280.08	207.32	205.12	227.40	227.08	-0.069	0.296	-0.129	-0.144	0.001	-0.001	0.946489	1.000000	-
Rv3252c	alkB	31	272.23	272.05	284.83	268.38	269.90	293.66	-0.024	-0.025	0.040	-0.044	-0.036	0.084	0.984801	1.000000	-
Rv3253c	-	25	139.83	129.62	138.86	106.79	111.66	136.22	0.132	0.027	0.122	-0.241	-0.180	0.096	0.612188	1.000000	-
Rv3254	-	20	197.53	188.94	178.55	183.22	184.92	193.15	0.072	0.009	-0.070	-0.034	-0.021	0.040	0.996672	1.000000	-
Rv3255c	manA	21	0.00	0.25	0.30	0.00	0.00	0.26	-0.038	0.032	0.046	-0.038	-0.038	0.034	0.545350	1.000000	-
Rv3256c	-	9	62.66	112.40	64.99	100.25	91.23	81.60	-0.420	0.375	-0.371	0.217	0.088	-0.064	0.067284	0.796623	-
Rv3257c	manB	24	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv3258c	-	5	8.35	4.98	6.31	3.58	9.74	7.16	0.192	-0.228	-0.047	-0.446	0.335	0.057	0.933262	1.000000	-
Rv3259	-	2	285.26	317.29	418.64	293.31	291.95	293.34	-0.148	0.003	0.397	-0.109	-0.115	-0.108	0.157025	1.000000	-
Rv3260c	whiB2	2	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv3261	fbiA	14	216.28	177.80	235.17	117.94	113.67	172.02	0.321	0.045	0.439	-0.527	-0.578	-0.001	0.243206	1.000000	-
Rv3262	fbiB	13	116.71	98.49	135.34	111.25	125.49	89.31	0.048	-0.186	0.253	-0.019	0.148	-0.320	0.488903	1.000000	-
Rv3263	-	29	185.03	186.58	175.12	164.95	156.23	190.54	0.067	0.079	-0.010	-0.094	-0.170	0.108	0.897215	1.000000	-
Rv3264c	manB	17	12.10	15.33	13.22	14.40	9.39	9.11	-0.014	0.236	0.078	0.169	-0.262	-0.291	0.993798	1.000000	-
Rv3265c	wbbL1	17	14.76	18.89	12.85	13.13	15.44	9.75	0.046	0.320	-0.100	-0.078	0.095	-0.376	0.993706	1.000000	-
Rv3266c	rmlD	17	7.88	2.69	7.72	4.58	3.98	1.79	0.398	-0.346	0.381	-0.029	-0.122	-0.526	0.801768	1.000000	-
Rv3267	-	23	4.34	22.12	9.38	14.20	24.87	9.38	-1.028	0.510	-0.406	0.011	0.649	-0.405	0.000000	0.000010	-
Rv3268	-	13	301.27	306.78	349.04	311.93	257.76	276.40	0.004	0.029	0.213	0.053	-0.218	-0.119	0.918482	1.000000	-
Rv3269	-	5	106.56	137.06	96.46	94.10	71.87	101.09	0.071	0.420	-0.066	-0.100	-0.466	-0.001	0.893407	1.000000	-
Rv3270	ctpC	17	165.66	149.02	174.81	157.00	144.53	186.85	0.023	-0.125	0.098	-0.052	-0.168	0.192	0.943550	1.000000	-
Rv3271c	-	6	77.47	107.08	61.26	78.59	74.43	101.89	-0.101	0.342	-0.417	-0.082	-0.155	0.273	0.859123	1.000000	-
Rv3272	-	19	80.33	75.00	76.58	77.94	76.43	67.82	0.081	-0.012	0.016	0.040	0.013	-0.148	0.993975	1.000000	-
Rv3273	-	31	77.27	84.54	64.95	70.34	83.01	60.32	0.069	0.192	-0.165	-0.057	0.167	-0.263	0.376288	1.000000	-
Rv3274c	fadE25	19	118.68	63.33	145.09	54.68	48.10	58.73	0.517	-0.339	0.796	-0.534	-0.703	-0.440	0.000021	0.000717	-
Rv3275c	purE	7	0.00	0.00	3.11	1.39	0.00	2.11	-0.288	-0.288	0.411	0.066	-0.288	0.221	0.244269	1.000000	-
Rv3276c	purK	10	17.32	16.75	31.54	37.93	19.60	11.76	-0.300	-0.338	0.411	0.644	-0.160	-0.714	0.839466	1.000000	-
Rv3277	-	13	23.89	26.63	28.55	35.19	33.72	29.26	-0.258	-0.127	-0.042	0.219	0.165	-0.012	0.933805	1.000000	-
Rv3278c	-	8	78.73	66.37	62.59	64.28	68.71	101.13	0.091	-0.140	-0.218	-0.183	-0.093	0.433	0.848504	1.000000	-
Rv3279c	birA	6	0.00	0.00	0.00	0.82	3.17	0.00	-0.180	-0.180	-0.180	0.040	0.528	-0.180	0.029680	0.421431	-
Rv3280	accD5	32	0.00	0.00	0.39	0.00	0.00	0.00	-0.019	-0.019	0.091	-0.019	-0.019	-0.019	0.306873	1.000000	-
Rv3281	-	3	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv3282	maf	11	45.23	55.16	59.91	66.35	51.91	52.24	-0.260	0.001	0.110	0.247	-0.079	-0.071	0.773614	1.000000	-
Rv3283	sseA	20	144.48	102.65	175.93	42.04	48.45	78.22	0.529	0.055	0.804	-1.140	-0.955	-0.316	0.000000	0.000000	-
Rv3284	-	5	80.86	75.14	92.46	98.32	98.00	55.21	-0.041	-0.140	0.142	0.226	0.222	-0.553	0.231639	1.000000	-
Rv3285	accA3	26	0.00	0.00	0.00	0.18	0.00	0.00	-0.009	-0.009	-0.009	0.043	-0.009	-0.009	0.600861	1.000000	-
Rv3286c	sigF	11	188.47	184.19	166.92	182.98	193.25	177.62	0.047	0.015	-0.123	0.006	0.082	-0.036	0.985587	1.000000	-
Rv3287c	rsbW	3	209.10	205.06	142.60	135.14	164.12	220.94	0.215	0.187	-0.322	-0.397	-0.126	0.292	0.786796	1.000000	-
Rv3288c	usfY	10	22.54	23.50	22.19	30.07	40.63	42.78	-0.358	-0.308	-0.376	-0.009	0.371	0.437	0.260663	1.000000	-
Rv3289c	-	7	193.85	231.14	199.41	248.12	249.95	239.21	-0.222	0.026	-0.182	0.126	0.136	0.074	0.950438	1.000000	-
Rv3290c	lat	25	253.96	251.06	267.32	272.73	282.68	249.07	-0.048	-0.065	0.024	0.053	0.103	-0.076	0.981821	1.000000	-
Rv3291c	-	11	110.84	109.18	89.87	136.57	102.80	120.36	-0.009	-0.030	-0.298	0.280	-0.113	0.104	0.860457	1.000000	-
Rv3292	-	20	210.43	219.92	189.81	227.11	215.98	196.13	0.004	0.066	-0.142	0.111	0.040	-0.096	0.979174	1.000000	-
Rv3293	pcd	16	161.87	190.11	165.80	197.11	166.24	187.28	-0.134	0.092	-0.100	0.143	-0.096	0.071	0.914175	1.000000	-
Rv3294c	-	20	73.06	103.61	85.02	86.15	98.43	110.94	-0.326	0.150	-0.121	-0.103	0.080	0.244	0.434822	1.000000	-
Rv3295	-	12	394.92	294.50	329.23	300.99	282.79	304.40	0.309	-0.108	0.050	-0.077	-0.166	-0.061	0.817658	1.000000	-
Rv3296	lhr	55	259.94	248.29	261.81	235.87	234.99	223.87	0.089	0.024	0.099	-0.049	-0.054	-0.122	0.810619	1.000000	-
Rv3297	nei	10	108.15	131.51	150.47	147.72	142.45	145.27	-0.334	-0.063	0.125	0.099	0.048	0.076	0.872483	1.000000	-
Rv3298c	lpqC	12	136.07	135.94	137.12	134.82	128.38	147.14	-0.005	-0.006	0.005	-0.018	-0.086	0.104	0.999581	1.000000	-
Rv3299c	atsB	46	112.03	97.17	108.39	111.11	108.66	112.86	0.046	-0.150	0.000	0.034	0.004	0.056	0.962865	1.000000	-
Rv3300c	-	11	107.13	122.04	140.75	139.57	94.58	103.37	-0.132	0.048	0.246	0.234	-0.304	-0.182	0.585938	1.000000	-
Rv3301c	phoY1	10	120.55	103.56	84.77	82.16	83.64	112.80	0.287	0.077	-0.197	-0.240	-0.215	0.195	0.598416	1.000000	-
Rv3302c	glpD2	28	0.14	0.00	0.00	0.00	0.00	0.00	0.033	-0.007	-0.007	-0.007	-0.007	-0.007	0.600679	1.000000	-
Rv3303c	lpdA	22	49.99	49.55	59.75	49.03	52.45	44.24	-0.022	-0.034	0.214	-0.047	0.041	-0.181	0.972482	1.000000	-
Rv3304	-	11	161.06	136.17	126.89	134.86	119.81	129.37	0.249	0.015	-0.083	0.002	-0.163	-0.056	0.567253	1.000000	-
Rv3305c	amiA1	20	36.44	39.75	42.89	55.60	61.75	56.31	-0.376	-0.265	-0.168	0.172	0.311	0.189	0.428717	1.000000	-
Rv3306c	amiB1	15	108.65	173.13	94.69	142.06	132.62	115.60	-0.225	0.424	-0.414	0.147	0.052	-0.139	0.651496	1.000000	-
Rv3307	deoD	11	125.69	129.09	128.20	149.14	133.51	118.58	-0.054	-0.017	-0.027	0.184	0.030	-0.135	0.930578	1.000000	-
Rv3308	pmmB	20	182.48	184.23	150.91	170.92	146.65	153.23	0.143	0.157	-0.123	0.052	-0.163	-0.101	0.887255	1.000000	-
Rv3309c	upp	8	253.38	235.78	263.58	233.62	260.55	201.74	0.068	-0.034	0.124	-0.047	0.108	-0.253	0.917441	1.000000	-
Rv3310	sapM	17	104.09	118.15	102.12	129.41	126.45	128.32	-0.174	0.001	-0.200	0.127	0.095	0.115	0.844170	1.000000	-
Rv3311	satS	16	49.54	85.15	41.83	105.54	105.29	75.86	-0.592	0.133	-0.812	0.427	0.424	-0.024	0.231669	1.000000	-
Rv3312c	-	17	342.49	329.04	343.42	318.57	324.19	350.24	0.033	-0.024	0.037	-0.070	-0.045	0.065	0.994206	1.000000	-
Rv3312A	-	5	151.81	199.71	216.75	153.41	193.23	185.92	-0.265	0.119	0.235	-0.251	0.073	0.019	0.545182	1.000000	-
Rv3313c	add	12	102.20	85.77	84.45	103.08	71.43	94.35	0.171	-0.069	-0.090	0.183	-0.317	0.061	0.476706	1.000000	-
Rv3314c	deoA	12	119.38	131.01	116.85	99.17	107.66	106.93	0.070	0.199	0.040	-0.186	-0.073	-0.082	0.646415	1.000000	-
Rv3315c	cdd	5	61.17	46.96	66.29	55.96	46.21	40.37	0.194	-0.154	0.302	0.076	-0.175	-0.350	0.816534	1.000000	-
Rv3316	sdhC	6	70.80	91.07	88.52	59.92	101.55	101.20	-0.256	0.086	0.047	-0.479	0.235	0.231	0.188120	1.000000	-
Rv3317	sdhD	4	82.15	76.26	69.40	78.94	96.59	109.84	-0.055	-0.156	-0.283	-0.109	0.166	0.343	0.521467	1.000000	-
Rv3318	sdhA	31	123.82	102.82	109.16	109.04	104.62	103.42	0.179	-0.078	0.004	0.003	-0.054	-0.070	0.930576	1.000000	-
Rv3319	sdhB	8	168.50	160.87	165.86	177.87	173.46	153.76	0.015	-0.050	-0.007	0.091	0.056	-0.113	0.999471	1.000000	-
Rv3320c	-	5	83.20	92.05	80.64	83.75	83.16	72.96	0.009	0.147	-0.033	0.018	0.009	-0.169	0.993007	1.000000	-
Rv3321c	-	3	487.96	415.10	484.17	417.78	374.04	450.98	0.153	-0.078	0.142	-0.069	-0.226	0.041	0.999195	1.000000	-
Rv3322c	-	7	282.15	263.08	309.97	263.61	259.38	279.48	0.030	-0.069	0.163	-0.066	-0.089	0.016	0.996849	1.000000	-
Rv3323c	moaX	15	155.58	171.53	136.68	149.19	166.56	192.36	-0.056	0.080	-0.237	-0.115	0.039	0.241	0.785398	1.000000	-
Rv3324c	moaC	10	236.81	230.77	185.00	230.04	235.44	217.71	0.087	0.051	-0.261	0.046	0.079	-0.031	0.993182	1.000000	-
Rv3325	-	4	191.95	224.36	204.57	246.70	230.14	168.83	-0.134	0.086	-0.044	0.220	0.122	-0.314	0.786172	1.000000	-
Rv3326	-	25	294.65	296.09	330.67	318.28	312.54	322.98	-0.084	-0.077	0.080	0.026	0.000	0.047	0.968743	1.000000	-
Rv3327	-	20	158.99	194.00	174.07	181.84	178.43	199.38	-0.183	0.097	-0.056	0.006	-0.021	0.135	0.776823	1.000000	-
Rv3328c	sigJ	12	130.70	141.51	136.39	157.07	127.88	139.91	-0.085	0.026	-0.025	0.171	-0.115	0.010	0.968605	1.000000	-
Rv3329	-	21	177.60	187.46	186.61	208.04	180.02	176.08	-0.065	0.011	0.005	0.158	-0.046	-0.077	0.913751	1.000000	-
Rv3330	dacB1	19	120.15	127.61	130.70	130.90	163.99	159.62	-0.201	-0.117	-0.084	-0.082	0.233	0.195	0.597268	1.000000	-
Rv3331	sugI	25	203.66	190.17	194.94	137.02	149.28	166.73	0.224	0.128	0.163	-0.331	-0.211	-0.057	0.146192	1.000000	-
Rv3332	nagA	6	212.85	161.32	158.00	157.96	159.14	168.88	0.319	-0.071	-0.100	-0.100	-0.090	-0.007	0.524071	1.000000	-
Rv3333c	-	12	89.81	79.72	71.88	86.80	95.09	99.43	0.041	-0.121	-0.261	-0.005	0.120	0.181	0.791838	1.000000	-
Rv3334	-	9	163.30	151.70	159.80	157.95	183.75	174.83	-0.016	-0.119	-0.047	-0.063	0.149	0.079	0.988210	1.000000	-
Rv3335c	-	11	93.79	68.51	72.42	71.16	83.68	100.27	0.189	-0.237	-0.162	-0.186	0.034	0.281	0.423595	1.000000	-
Rv3336c	trpS	15	2.51	3.04	3.75	4.94	5.11	4.27	-0.251	-0.153	-0.031	0.153	0.179	0.053	0.973528	1.000000	-
Rv3337	-	9	67.83	68.57	50.02	83.14	76.74	78.24	-0.057	-0.042	-0.461	0.218	0.110	0.136	0.962232	1.000000	-
Rv3338	-	4	70.90	62.50	50.75	54.80	84.54	42.53	0.202	0.032	-0.244	-0.142	0.440	-0.474	0.562012	1.000000	-
Rv3339c	icd1	26	81.54	104.02	71.99	90.01	93.70	101.76	-0.142	0.191	-0.311	-0.007	0.047	0.161	0.823587	1.000000	-
Rv3340	metC	17	264.62	240.23	279.88	191.45	178.11	241.44	0.182	0.045	0.262	-0.274	-0.376	0.053	0.126548	1.000000	-
Rv3341	metX	15	64.01	64.43	61.37	33.79	35.88	58.20	0.252	0.261	0.196	-0.579	-0.503	0.125	0.008886	0.167234	-
Rv3342	-	9	77.80	62.92	64.86	74.59	64.22	65.74	0.175	-0.111	-0.070	0.118	-0.084	-0.052	0.942091	1.000000	-
Rv3343c	PPE54	156	50.34	49.75	47.38	49.65	48.98	56.71	-0.003	-0.019	-0.083	-0.021	-0.039	0.154	0.908870	1.000000	-
Rv3344c	PE_PGRS49	6	217.82	192.03	244.19	226.12	195.49	199.35	0.035	-0.143	0.196	0.088	-0.118	-0.090	0.994918	1.000000	-
Rv3345c	PE_PGRS50	47	250.92	229.00	226.96	202.40	201.48	203.18	0.192	0.063	0.050	-0.111	-0.117	-0.106	0.713551	1.000000	-
Rv3346c	-	3	295.02	276.08	279.46	319.79	330.37	336.63	-0.053	-0.147	-0.130	0.062	0.108	0.134	0.997907	1.000000	-
Rv3347c	PPE55	120	104.92	108.34	99.49	103.10	105.43	120.33	-0.026	0.018	-0.099	-0.050	-0.020	0.163	0.812306	1.000000	-
Rv3348	-	3	331.92	347.19	279.29	243.35	251.77	261.93	0.212	0.276	-0.033	-0.228	-0.180	-0.124	0.918565	1.000000	-
Rv3349c	-	3	326.43	307.91	329.91	355.74	332.67	342.11	-0.026	-0.109	-0.011	0.096	0.001	0.041	0.993232	1.000000	-
Rv3350c	PPE56	129	125.55	129.01	124.43	130.87	121.93	131.38	-0.018	0.020	-0.031	0.040	-0.059	0.045	0.993145	1.000000	-
Rv3351c	-	15	311.83	328.44	305.73	342.85	307.45	290.96	-0.012	0.061	-0.040	0.122	-0.032	-0.111	0.941407	1.000000	-
Rv3352c	-	2	314.80	318.97	307.64	359.03	285.60	283.69	0.014	0.033	-0.018	0.201	-0.124	-0.133	0.997624	1.000000	-
Rv3353c	-	3	259.23	281.45	199.18	201.72	266.82	231.73	0.109	0.225	-0.263	-0.245	0.150	-0.050	0.416237	1.000000	-
Rv3354	-	6	468.71	503.20	574.29	499.39	445.78	418.89	-0.049	0.052	0.241	0.042	-0.120	-0.209	0.948829	1.000000	-
Rv3355c	-	4	110.22	145.44	137.63	116.15	128.65	152.81	-0.248	0.137	0.060	-0.175	-0.034	0.206	0.997415	1.000000	-
Rv3356c	folD	9	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv3357	-	5	140.19	185.88	155.08	145.59	133.20	160.52	-0.126	0.269	0.015	-0.073	-0.197	0.063	0.897446	1.000000	-
Rv3358	-	4	112.67	109.17	117.27	96.39	102.50	107.74	0.063	0.020	0.119	-0.152	-0.067	0.001	0.997876	1.000000	-
Rv3359	-	18	256.90	266.47	250.18	266.51	259.21	254.91	-0.012	0.040	-0.049	0.040	0.001	-0.023	0.998842	1.000000	-
Rv3360	-	2	111.27	134.97	87.45	107.80	116.88	115.48	-0.013	0.255	-0.344	-0.057	0.055	0.038	0.617024	1.000000	-
Rv3361c	-	5	62.69	51.85	58.71	64.14	90.61	73.73	-0.088	-0.340	-0.176	-0.058	0.410	0.130	0.905543	1.000000	-
Rv3362c	-	7	79.05	66.40	111.41	87.41	88.55	103.18	-0.167	-0.402	0.303	-0.030	-0.012	0.198	0.960543	1.000000	-
Rv3363c	-	8	139.90	137.04	136.15	147.00	146.73	180.56	-0.078	-0.106	-0.115	-0.009	-0.011	0.279	0.712201	1.000000	-
Rv3364c	-	4	120.61	195.79	111.68	156.30	157.19	142.03	-0.278	0.399	-0.384	0.083	0.091	-0.050	0.745628	1.000000	-
Rv3365c	-	33	286.75	272.31	273.04	271.03	255.48	256.82	0.089	0.016	0.020	0.009	-0.074	-0.067	0.982046	1.000000	-
Rv3366	spoU	6	221.98	209.75	280.03	249.57	246.64	246.47	-0.124	-0.204	0.204	0.041	0.024	0.023	0.914522	1.000000	-
Rv3367	PE_PGRS51	23	163.42	160.89	174.06	160.44	158.64	168.45	-0.008	-0.029	0.081	-0.033	-0.049	0.035	0.998598	1.000000	-
Rv3368c	-	8	102.23	121.69	158.43	120.64	103.24	112.54	-0.219	0.022	0.389	0.010	-0.205	-0.086	0.793034	1.000000	-
Rv3369	-	7	66.82	80.06	82.26	80.85	94.37	98.74	-0.307	-0.063	-0.026	-0.049	0.161	0.224	0.725851	1.000000	-
Rv3370c	dnaE2	35	153.99	152.84	163.83	151.54	142.17	137.67	0.034	0.023	0.120	0.011	-0.078	-0.123	0.838054	1.000000	-
Rv3371	-	23	108.32	81.49	100.13	87.82	92.14	113.72	0.148	-0.242	0.040	-0.140	-0.074	0.215	0.742007	1.000000	-
Rv3372	otsB2	9	1.21	13.02	2.42	6.04	8.72	5.03	-0.833	0.702	-0.577	-0.004	0.309	-0.143	0.465659	1.000000	-
Rv3373	echA18	3	108.28	118.00	120.80	86.87	106.75	87.34	0.047	0.165	0.198	-0.256	0.027	-0.248	0.752994	1.000000	-
Rv3374	echA18.1	2	236.18	334.49	248.59	239.60	248.05	287.76	-0.167	0.326	-0.095	-0.147	-0.098	0.113	0.628738	1.000000	-
Rv3375	amiD	22	131.60	112.87	101.79	116.97	111.42	91.14	0.236	0.023	-0.119	0.073	0.006	-0.270	0.620809	1.000000	-
Rv3376	-	9	160.08	175.60	178.47	171.00	149.29	159.54	-0.048	0.082	0.104	0.044	-0.145	-0.053	0.985519	1.000000	-
Rv3377c	-	59	70.41	73.81	70.36	62.50	66.76	67.54	0.036	0.099	0.035	-0.124	-0.036	-0.020	0.971509	1.000000	-
Rv3378c	-	40	10.19	11.69	15.34	14.21	13.63	21.05	-0.349	-0.214	0.072	-0.011	-0.055	0.429	0.413364	1.000000	-
Rv3379c	dxs2	34	99.82	86.88	101.25	86.25	91.48	94.27	0.092	-0.098	0.112	-0.108	-0.027	0.014	0.892407	1.000000	-
Rv3380c	-	23	305.08	313.98	340.32	327.48	301.29	303.22	-0.046	-0.006	0.109	0.054	-0.064	-0.055	0.967880	1.000000	-
Rv3381c	-	4	220.83	247.52	245.00	240.01	237.77	172.82	-0.041	0.120	0.106	0.077	0.063	-0.386	0.906737	1.000000	-
Rv3382c	lytB1	12	186.80	182.99	186.75	165.92	176.02	185.44	0.047	0.018	0.047	-0.119	-0.036	0.037	0.985572	1.000000	-
Rv3383c	idsB	19	116.68	117.54	117.61	100.52	107.48	109.23	0.063	0.073	0.074	-0.143	-0.051	-0.029	0.978935	1.000000	-
Rv3384c	-	3	709.79	542.46	646.06	652.57	645.27	510.02	0.199	-0.186	0.064	0.079	0.063	-0.274	0.877666	1.000000	-
Rv3385c	-	3	197.36	188.71	225.18	176.16	168.75	205.11	0.027	-0.036	0.213	-0.132	-0.192	0.082	0.962943	1.000000	-
Rv3386	-	11	245.30	256.00	207.33	257.69	247.14	227.21	0.030	0.091	-0.207	0.100	0.041	-0.078	0.998520	1.000000	-
Rv3387	-	7	451.47	390.44	431.31	483.29	393.37	331.65	0.125	-0.082	0.060	0.222	-0.071	-0.314	0.981079	1.000000	-
Rv3388	PE_PGRS52	19	186.54	187.31	186.19	179.38	170.47	179.42	0.038	0.044	0.035	-0.017	-0.088	-0.017	0.998983	1.000000	-
Rv3389c	-	9	237.31	250.17	213.72	235.97	244.11	247.52	-0.005	0.070	-0.153	-0.013	0.035	0.055	0.983351	1.000000	-
Rv3390	lpqD	12	277.50	269.08	274.74	298.49	283.97	285.69	-0.021	-0.064	-0.035	0.083	0.012	0.021	0.999009	1.000000	-
Rv3391	acrA1	35	223.67	191.52	216.02	203.12	189.35	186.41	0.146	-0.073	0.097	0.010	-0.089	-0.111	0.813781	1.000000	-
Rv3392c	cmaA1	13	100.87	73.69	107.47	77.77	79.26	84.38	0.199	-0.229	0.286	-0.156	-0.131	-0.045	0.588939	1.000000	-
Rv3393	iunH	10	204.83	184.23	222.73	173.28	160.59	149.09	0.163	0.014	0.281	-0.072	-0.179	-0.283	0.938461	1.000000	-
Rv3394c	-	16	143.17	116.43	132.07	140.27	125.29	141.01	0.102	-0.185	-0.010	0.074	-0.083	0.081	0.822220	1.000000	-
Rv3395c	-	4	52.59	42.04	63.22	36.62	34.71	47.58	0.172	-0.120	0.416	-0.297	-0.364	0.040	0.863805	1.000000	-
Rv3395A	-	10	59.73	55.05	64.75	57.74	61.11	59.01	0.004	-0.105	0.111	-0.041	0.034	-0.012	0.997807	1.000000	-
Rv3396c	guaA	16	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv3397c	phyA	19	98.06	96.66	111.10	85.15	79.33	97.82	0.048	0.028	0.220	-0.145	-0.241	0.045	0.793799	1.000000	-
Rv3398c	idsA1	11	95.78	108.73	117.08	75.05	105.90	70.76	0.003	0.178	0.280	-0.329	0.141	-0.408	0.514379	1.000000	-
Rv3399	-	18	65.08	66.63	74.21	81.50	72.95	72.01	-0.137	-0.105	0.040	0.167	0.017	-0.001	0.942164	1.000000	-
Rv3400	-	14	125.10	140.36	138.25	135.67	148.59	139.94	-0.136	0.024	0.003	-0.024	0.103	0.020	0.994296	1.000000	-
Rv3401	-	36	265.99	258.20	248.09	240.45	245.98	223.09	0.105	0.063	0.006	-0.038	-0.006	-0.144	0.951242	1.000000	-
Rv3402c	-	28	242.13	251.34	254.63	246.11	257.22	252.25	-0.049	0.004	0.023	-0.026	0.037	0.009	0.998714	1.000000	-
Rv3403c	-	26	321.17	323.83	326.85	322.35	330.63	305.48	-0.002	0.009	0.022	0.003	0.039	-0.074	0.998558	1.000000	-
Rv3404c	-	10	199.96	214.13	190.47	199.07	188.04	221.22	-0.015	0.081	-0.084	-0.022	-0.102	0.127	0.991664	1.000000	-
Rv3405c	-	9	233.24	224.23	261.43	207.44	256.90	221.90	-0.006	-0.061	0.156	-0.171	0.131	-0.076	0.997348	1.000000	-
Rv3406	-	17	242.34	230.12	223.92	217.60	213.16	198.62	0.130	0.057	0.019	-0.022	-0.051	-0.150	0.991331	1.000000	-
Rv3407	-	3	180.66	180.08	169.96	216.14	207.02	193.86	-0.080	-0.085	-0.166	0.172	0.111	0.019	0.968431	1.000000	-
Rv3408	-	9	341.71	331.71	332.10	363.79	348.90	347.95	-0.011	-0.053	-0.052	0.078	0.019	0.015	0.999292	1.000000	-
Rv3409c	choD	22	250.03	211.67	273.23	182.98	208.34	178.60	0.197	-0.038	0.323	-0.243	-0.061	-0.277	0.178824	1.000000	-
Rv3410c	guaB3	14	211.71	170.73	213.34	44.89	71.57	142.53	0.555	0.253	0.566	-1.564	-0.945	0.001	0.001349	0.031119	-
Rv3411c	guaB2	15	5.10	4.13	5.01	6.08	8.71	4.37	-0.065	-0.211	-0.078	0.068	0.376	-0.174	0.976747	1.000000	-
Rv3412	-	9	74.27	94.38	90.86	137.37	114.91	94.93	-0.421	-0.095	-0.147	0.424	0.176	-0.087	0.103378	1.000000	-
Rv3413c	-	6	198.13	140.22	147.75	166.18	173.79	150.66	0.276	-0.208	-0.135	0.029	0.092	-0.108	0.987072	1.000000	-
Rv3414c	sigD	10	164.15	173.41	144.78	158.59	154.32	184.62	0.007	0.084	-0.168	-0.041	-0.079	0.172	0.965141	1.000000	-
Rv3415c	-	10	394.54	355.31	343.44	337.97	351.88	345.51	0.151	0.002	-0.046	-0.069	-0.012	-0.038	0.993824	1.000000	-
Rv3416	whiB3	4	256.22	273.31	255.62	298.20	333.57	251.20	-0.116	-0.024	-0.119	0.099	0.259	-0.144	0.821037	1.000000	-
Rv3417c	groEL	16	84.84	105.78	59.24	69.46	79.26	89.69	0.057	0.359	-0.427	-0.214	-0.036	0.133	0.566301	1.000000	-
Rv3418c	groES	4	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv3419c	gcp	12	59.04	62.16	50.28	58.39	38.95	53.36	0.126	0.194	-0.086	0.111	-0.417	-0.008	0.499071	1.000000	-
Rv3420c	rimI	11	88.66	130.89	87.53	129.42	127.94	116.85	-0.340	0.197	-0.357	0.181	0.165	0.040	0.045198	0.586116	-
Rv3421c	-	12	51.29	60.72	36.57	58.77	33.38	50.59	0.072	0.295	-0.366	0.252	-0.481	0.054	0.048551	0.616288	-
Rv3422c	-	6	32.81	27.19	37.47	40.82	15.64	17.54	0.171	-0.061	0.339	0.449	-0.702	-0.575	0.245463	1.000000	-
Rv3423c	alr	21	1.35	0.00	0.00	0.00	0.21	0.74	0.238	-0.107	-0.107	-0.107	-0.046	0.093	0.062228	0.750114	-
Rv3424c	-	10	91.74	99.30	96.86	105.72	106.32	93.86	-0.104	0.005	-0.030	0.091	0.099	-0.073	0.985943	1.000000	-
Rv3425	PPE57	22	78.60	91.50	70.93	80.98	97.19	93.83	-0.114	0.093	-0.253	-0.074	0.175	0.127	0.850015	1.000000	-
Rv3426	PPE58	25	10.92	20.75	20.39	24.61	19.85	20.23	-0.620	0.074	0.054	0.276	0.023	0.045	0.297801	1.000000	-
Rv3427c	-	11	92.84	90.26	80.18	77.49	79.69	91.72	0.115	0.076	-0.085	-0.132	-0.094	0.098	0.990644	1.000000	-
Rv3428c	-	17	89.84	82.36	105.12	82.00	94.06	66.01	0.051	-0.068	0.266	-0.074	0.113	-0.367	0.594362	1.000000	-
Rv3429	PPE59	29	7.99	6.52	7.12	10.44	8.13	8.56	-0.015	-0.189	-0.115	0.234	0.000	0.047	0.880666	1.000000	-
Rv3430c	-	23	234.21	208.47	212.94	220.68	209.25	184.22	0.143	-0.021	0.009	0.059	-0.016	-0.195	0.968956	1.000000	-
Rv3431c	-	9	203.19	165.53	174.98	189.34	186.48	195.72	0.125	-0.163	-0.085	0.026	0.005	0.073	0.991143	1.000000	-
Rv3432c	gadB	22	195.16	190.61	191.90	184.99	207.85	183.55	0.020	-0.013	-0.003	-0.055	0.109	-0.066	0.984297	1.000000	-
Rv3433c	-	9	398.61	382.02	358.53	396.81	356.33	335.50	0.101	0.041	-0.050	0.095	-0.059	-0.144	0.992157	1.000000	-
Rv3434c	-	11	191.68	177.30	187.22	158.10	166.62	244.56	0.030	-0.079	-0.003	-0.240	-0.166	0.374	0.681278	1.000000	-
Rv3435c	-	12	151.30	130.28	124.97	144.22	165.25	176.86	0.023	-0.185	-0.243	-0.044	0.146	0.242	0.930092	1.000000	-
Rv3436c	glmS	30	0.00	0.00	0.73	0.14	0.00	0.00	-0.041	-0.041	0.154	-0.000	-0.041	-0.041	0.130899	1.000000	-
Rv3437	-	9	327.46	293.96	318.38	312.65	314.95	297.57	0.074	-0.079	0.034	0.008	0.019	-0.062	0.999589	1.000000	-
Rv3438	-	12	168.23	127.39	152.94	129.72	142.16	141.63	0.220	-0.167	0.087	-0.142	-0.015	-0.020	0.954720	1.000000	-
Rv3439c	-	10	297.63	319.94	316.77	317.22	359.70	304.70	-0.100	0.003	-0.011	-0.009	0.169	-0.067	0.980247	1.000000	-
Rv3440c	-	8	609.24	491.25	590.70	588.70	506.87	458.49	0.170	-0.138	0.126	0.121	-0.093	-0.236	0.868536	1.000000	-
Rv3441c	mrsA	15	19.90	9.99	33.38	17.13	21.05	13.97	0.039	-0.693	0.663	-0.131	0.104	-0.354	0.901316	1.000000	-
Rv3442c	rpsI	7	0.00	0.71	0.90	1.92	0.00	0.00	-0.161	0.032	0.078	0.308	-0.161	-0.161	0.434344	1.000000	-
Rv3443c	rplM	7	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv3444c	esxT	4	244.13	154.45	201.56	225.51	212.93	272.51	0.157	-0.487	-0.114	0.044	-0.037	0.312	0.611095	1.000000	-
Rv3445c	esxU	4	176.36	170.19	194.39	196.00	181.63	199.12	-0.077	-0.127	0.060	0.071	-0.036	0.094	0.993914	1.000000	-
Rv3446c	-	15	181.81	165.18	171.27	168.20	177.38	148.90	0.104	-0.030	0.020	-0.005	0.070	-0.175	0.884724	1.000000	-
Rv3447c	-	46	109.15	109.38	96.87	106.80	93.37	108.56	0.066	0.069	-0.098	0.036	-0.148	0.059	0.952591	1.000000	-
Rv3448	-	26	93.29	74.60	94.75	90.30	70.50	84.08	0.134	-0.171	0.155	0.089	-0.247	-0.008	0.492974	1.000000	-
Rv3449	mycP4	21	156.68	150.62	171.74	142.28	170.82	133.59	0.021	-0.034	0.150	-0.113	0.142	-0.201	0.924726	1.000000	-
Rv3450c	-	15	327.41	312.01	320.24	309.34	305.87	269.54	0.090	0.021	0.058	0.009	-0.007	-0.186	0.977037	1.000000	-
Rv3451	cut3	15	316.72	269.20	327.05	323.36	284.91	287.18	0.070	-0.160	0.116	0.100	-0.080	-0.069	0.942725	1.000000	-
Rv3452	cut4	7	377.60	372.83	410.09	408.98	320.42	400.73	-0.016	-0.034	0.102	0.098	-0.249	0.069	0.976654	1.000000	-
Rv3453	-	11	200.71	203.97	144.04	175.27	171.98	141.26	0.210	0.232	-0.255	0.019	-0.007	-0.282	0.507205	1.000000	-
Rv3454	-	28	10.47	11.82	13.87	14.57	16.89	15.41	-0.284	-0.163	0.002	0.055	0.217	0.115	0.488067	1.000000	-
Rv3455c	truA	12	37.89	37.64	35.70	35.81	18.80	32.32	0.174	0.165	0.098	0.102	-0.676	-0.027	0.453849	1.000000	-
Rv3456c	rplQ	8	0.00	0.63	0.00	0.00	0.00	0.00	-0.030	0.140	-0.030	-0.030	-0.030	-0.030	0.308863	1.000000	-
Rv3457c	rpoA	13	0.30	0.00	0.00	0.71	0.90	0.00	-0.006	-0.089	-0.089	0.103	0.150	-0.089	0.394710	1.000000	-
Rv3458c	rpsD	13	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv3459c	rpsK	2	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv3460c	rpsM	10	2.23	2.51	0.00	2.81	5.24	4.06	-0.110	-0.055	-0.643	-0.000	0.391	0.214	0.424585	1.000000	-
Rv3461c	rpmJ	2	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv3462c	infA	5	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv3463	-	18	89.01	102.61	102.78	87.93	91.13	85.32	-0.062	0.133	0.135	-0.079	-0.030	-0.120	0.840154	1.000000	-
Rv3464	rmlB	23	0.00	0.66	0.00	0.00	0.00	0.61	-0.060	0.119	-0.060	-0.060	-0.060	0.107	0.249974	1.000000	-
Rv3465	rmlC	8	0.48	0.00	0.00	0.00	0.00	0.00	0.110	-0.023	-0.023	-0.023	-0.023	-0.023	0.606721	1.000000	-
Rv3466	-	10	198.76	166.09	211.65	170.75	171.06	198.47	0.092	-0.160	0.181	-0.121	-0.118	0.090	0.958086	1.000000	-
Rv3467	-	14	195.17	193.25	217.21	195.85	186.74	202.25	-0.023	-0.037	0.128	-0.018	-0.085	0.027	0.993048	1.000000	-
Rv3468c	-	18	123.72	108.65	124.23	109.93	103.53	125.52	0.090	-0.090	0.096	-0.073	-0.156	0.110	0.906765	1.000000	-
Rv3469c	mhpE	12	125.75	109.15	93.52	104.86	109.33	101.19	0.219	0.024	-0.189	-0.032	0.026	-0.081	0.895784	1.000000	-
Rv3470c	ilvB2	19	109.82	80.05	105.83	84.98	96.50	113.85	0.150	-0.283	0.099	-0.202	-0.028	0.199	0.376690	1.000000	-
Rv3471c	-	6	131.10	134.42	135.44	123.02	142.99	131.61	-0.021	0.014	0.024	-0.109	0.100	-0.016	0.999384	1.000000	-
Rv3472	-	11	169.86	148.76	181.48	195.03	184.79	181.89	-0.058	-0.243	0.035	0.137	0.061	0.039	0.940969	1.000000	-
Rv3473c	bpoA	9	158.48	205.54	156.11	160.18	171.58	182.18	-0.117	0.248	-0.139	-0.103	-0.006	0.078	0.617094	1.000000	-
Rv3474	-	4	194.68	213.03	195.26	243.70	247.94	167.89	-0.109	0.017	-0.105	0.207	0.232	-0.317	0.774050	1.000000	-
Rv3475	-	26	281.44	294.73	315.01	306.74	285.57	292.44	-0.071	-0.006	0.088	0.051	-0.051	-0.017	0.974937	1.000000	-
Rv3476c	kgtP	38	88.84	88.55	91.58	87.56	82.82	97.04	-0.009	-0.013	0.033	-0.028	-0.104	0.112	0.978868	1.000000	-
Rv3477	PE31	5	63.58	74.62	37.51	39.56	27.97	58.32	0.311	0.527	-0.378	-0.310	-0.745	0.196	0.000071	0.002182	-
Rv3478	PPE60	18	57.33	47.84	38.20	24.46	20.15	39.95	0.536	0.298	0.007	-0.545	-0.773	0.064	0.038482	0.515243	-
Rv3479	-	39	122.82	102.77	115.04	109.25	107.60	113.43	0.130	-0.116	0.039	-0.032	-0.053	0.020	0.902325	1.000000	-
Rv3480c	-	30	93.30	113.99	112.02	115.37	123.16	110.60	-0.244	0.032	0.008	0.048	0.139	-0.010	0.782724	1.000000	-
Rv3481c	-	10	121.44	117.75	105.98	134.21	113.62	125.43	0.020	-0.023	-0.169	0.158	-0.073	0.064	0.973587	1.000000	-
Rv3482c	-	10	125.45	120.64	89.97	121.80	128.42	140.06	0.049	-0.005	-0.408	0.008	0.082	0.203	0.766559	1.000000	-
Rv3483c	-	10	447.20	389.56	407.05	423.38	405.06	409.05	0.112	-0.085	-0.023	0.033	-0.030	-0.016	0.985467	1.000000	-
Rv3484	cpsA	27	172.55	177.02	162.36	186.14	190.64	176.38	-0.040	-0.004	-0.125	0.067	0.100	-0.009	0.971733	1.000000	-
Rv3485c	-	10	162.26	212.69	212.81	190.89	213.88	217.52	-0.305	0.075	0.076	-0.077	0.083	0.107	0.883915	1.000000	-
Rv3486	-	6	123.56	119.91	87.92	121.98	120.60	116.23	0.099	0.058	-0.369	0.081	0.065	0.014	0.967162	1.000000	-
Rv3487c	lipF	14	380.14	404.67	396.63	405.48	404.07	404.11	-0.070	0.019	-0.009	0.022	0.017	0.017	0.998986	1.000000	-
Rv3488	-	5	184.12	146.72	199.33	131.78	129.90	120.92	0.267	-0.051	0.379	-0.200	-0.220	-0.319	0.953306	1.000000	-
Rv3489	-	3	71.94	72.97	50.08	54.59	41.78	69.70	0.239	0.258	-0.243	-0.129	-0.478	0.197	0.762715	1.000000	-
Rv3490	otsA	30	60.80	95.12	37.91	77.74	77.00	86.66	-0.237	0.369	-0.854	0.094	0.081	0.241	0.000001	0.000059	-
Rv3491	-	11	209.49	222.50	182.62	250.71	247.92	216.29	-0.079	0.006	-0.272	0.174	0.159	-0.034	0.961815	1.000000	-
Rv3492c	-	10	106.90	108.82	88.43	184.53	192.13	107.61	-0.286	-0.261	-0.546	0.475	0.531	-0.277	0.024035	0.360378	-
Rv3493c	-	13	90.61	111.67	102.25	203.20	168.38	105.18	-0.500	-0.213	-0.334	0.623	0.359	-0.295	0.014307	0.241886	-
Rv3494c	mce4F	25	188.03	211.18	178.50	343.20	352.66	218.89	-0.395	-0.231	-0.468	0.457	0.495	-0.181	0.000348	0.009325	-
Rv3495c	lprN	13	61.60	96.18	67.71	153.04	178.99	104.52	-0.792	-0.189	-0.666	0.454	0.674	-0.075	0.000055	0.001749	-
Rv3496c	mce4D	26	136.80	195.09	160.41	321.20	318.02	172.54	-0.649	-0.152	-0.427	0.553	0.539	-0.325	0.000000	0.000000	-
Rv3497c	mce4C	18	69.92	99.24	72.39	178.33	188.93	110.79	-0.738	-0.261	-0.691	0.553	0.634	-0.110	0.000001	0.000031	-
Rv3498c	mce4B	12	89.58	141.31	127.32	276.18	219.66	149.50	-0.865	-0.236	-0.381	0.707	0.383	-0.157	0.128046	1.000000	-
Rv3499c	mce4A	31	105.75	176.73	128.36	248.63	246.46	141.24	-0.697	0.018	-0.429	0.498	0.486	-0.296	0.000000	0.000000	-
Rv3500c	yrbE4B	22	82.59	114.76	94.72	177.52	191.92	118.86	-0.625	-0.173	-0.438	0.434	0.544	-0.125	0.035319	0.484269	-
Rv3501c	yrbE4A	10	98.51	119.73	90.26	209.76	208.61	107.46	-0.477	-0.208	-0.597	0.576	0.568	-0.357	0.036881	0.498833	-
Rv3502c	fabG	11	262.91	172.50	249.87	329.37	292.28	126.77	0.135	-0.459	0.063	0.455	0.285	-0.889	0.064336	0.773189	-
Rv3503c	fdxD	2	17.90	10.20	14.05	18.72	25.70	27.30	-0.066	-0.658	-0.332	-0.016	0.357	0.430	0.606213	1.000000	-
Rv3504	fadE26	20	195.44	196.49	180.67	188.54	185.09	193.10	0.040	0.048	-0.070	-0.010	-0.036	0.024	0.999586	1.000000	-
Rv3505	fadE27	12	123.93	103.37	140.93	103.15	121.38	124.95	0.049	-0.202	0.228	-0.205	0.020	0.060	0.859506	1.000000	-
Rv3506	fadD17	25	167.29	151.27	172.40	135.70	131.41	152.53	0.136	-0.005	0.178	-0.156	-0.201	0.007	0.696662	1.000000	-
Rv3507	PE_PGRS53	41	157.48	153.04	160.54	141.84	145.05	123.64	0.097	0.057	0.124	-0.049	-0.018	-0.240	0.820457	1.000000	-
Rv3508	PE_PGRS54	37	169.21	145.72	187.13	169.09	179.23	153.97	0.015	-0.194	0.156	0.014	0.096	-0.117	0.896399	1.000000	-
Rv3509c	ilvX	22	325.89	328.45	343.14	302.71	315.03	314.39	0.019	0.030	0.092	-0.086	-0.029	-0.032	0.982954	1.000000	-
Rv3510c	-	16	127.26	131.81	132.34	132.15	112.22	144.52	-0.030	0.019	0.024	0.022	-0.204	0.147	0.961726	1.000000	-
Rv3511	PE_PGRS55	24	376.37	330.00	384.63	350.13	311.23	309.76	0.129	-0.058	0.160	0.026	-0.141	-0.148	0.828055	1.000000	-
Rv3512	PE_PGRS56	27	183.38	163.13	177.65	159.47	154.75	143.30	0.160	-0.004	0.115	-0.036	-0.078	-0.185	0.790033	1.000000	-
Rv3513c	fadD18	16	394.36	357.81	338.54	388.81	378.86	391.79	0.072	-0.067	-0.146	0.051	0.014	0.062	0.986155	1.000000	-
Rv3514	PE_PGRS57	33	203.93	162.10	206.83	199.97	189.44	155.09	0.128	-0.195	0.148	0.100	0.024	-0.256	0.707156	1.000000	-
Rv3515c	fadD19	30	136.25	130.44	134.81	139.40	140.57	147.41	-0.019	-0.080	-0.034	0.013	0.024	0.090	0.989646	1.000000	-
Rv3516	echA19	7	52.94	77.68	87.18	62.25	68.19	63.68	-0.346	0.167	0.324	-0.131	-0.009	-0.101	0.467719	1.000000	-
Rv3517	-	15	218.12	159.25	222.23	199.46	192.75	163.29	0.176	-0.266	0.202	0.050	0.002	-0.231	0.967408	1.000000	-
Rv3518c	cyp142	13	78.76	66.34	82.09	82.44	70.14	85.99	0.020	-0.212	0.076	0.082	-0.137	0.139	0.992625	1.000000	-
Rv3519	-	11	175.13	169.32	194.24	192.27	194.77	202.40	-0.100	-0.147	0.046	0.031	0.050	0.104	0.962665	1.000000	-
Rv3520c	-	16	265.09	245.74	238.06	261.23	292.49	266.63	0.019	-0.088	-0.133	-0.002	0.158	0.027	0.956768	1.000000	-
Rv3521	-	15	246.49	235.62	253.51	244.63	243.37	217.01	0.037	-0.027	0.077	0.026	0.019	-0.143	0.961397	1.000000	-
Rv3522	ltp4	18	161.93	154.60	166.14	158.90	147.40	121.10	0.091	0.027	0.127	0.065	-0.040	-0.313	0.798475	1.000000	-
Rv3523	ltp3	18	146.44	159.62	157.65	161.11	142.05	151.54	-0.062	0.059	0.041	0.072	-0.104	-0.014	0.986053	1.000000	-
Rv3524	-	20	134.06	124.95	128.58	125.82	122.11	132.95	0.063	-0.034	0.005	-0.025	-0.066	0.052	0.999302	1.000000	-
Rv3525c	-	8	208.63	173.31	188.82	222.08	229.63	249.85	-0.023	-0.284	-0.163	0.065	0.112	0.232	0.910707	1.000000	-
Rv3526	-	22	83.84	73.35	93.24	83.89	81.13	61.64	0.072	-0.109	0.217	0.073	0.027	-0.343	0.541511	1.000000	-
Rv3527	-	6	75.58	97.63	105.24	100.81	93.27	86.43	-0.285	0.064	0.167	0.108	0.002	-0.102	0.934972	1.000000	-
Rv3528c	-	36	4.54	7.49	9.48	8.97	9.65	7.55	-0.441	-0.052	0.161	0.110	0.178	-0.045	0.435329	1.000000	-
Rv3529c	-	26	56.92	42.54	52.34	47.54	52.67	48.31	0.170	-0.212	0.059	-0.067	0.067	-0.046	0.757612	1.000000	-
Rv3530c	-	17	55.99	51.66	57.14	70.42	58.11	61.36	-0.072	-0.178	-0.045	0.234	-0.023	0.050	0.926233	1.000000	-
Rv3531c	-	24	122.20	152.29	128.51	134.02	124.78	139.72	-0.124	0.183	-0.054	0.004	-0.095	0.062	0.700999	1.000000	-
Rv3532	PPE61	21	226.30	216.18	211.15	207.28	200.68	225.66	0.075	0.011	-0.022	-0.049	-0.094	0.071	0.994576	1.000000	-
Rv3533c	PPE62	20	102.45	104.76	97.84	100.64	97.97	116.44	-0.012	0.019	-0.075	-0.036	-0.074	0.165	0.974976	1.000000	-
Rv3534c	-	10	148.74	162.46	158.62	150.67	168.58	152.42	-0.075	0.049	0.015	-0.057	0.100	-0.041	0.998584	1.000000	-
Rv3535c	-	12	214.37	277.75	237.33	220.48	286.60	259.08	-0.213	0.153	-0.069	-0.173	0.198	0.055	0.444952	1.000000	-
Rv3536c	-	8	26.95	29.88	27.66	25.02	43.43	55.98	-0.318	-0.191	-0.286	-0.408	0.282	0.615	0.103320	1.000000	-
Rv3537	-	37	49.14	53.54	58.20	70.31	64.70	50.05	-0.211	-0.098	0.012	0.265	0.154	-0.187	0.518859	1.000000	-
Rv3538	-	13	39.29	33.24	38.24	39.87	39.14	30.47	0.087	-0.125	0.052	0.105	0.082	-0.234	0.969388	1.000000	-
Rv3539	PPE63	30	116.89	86.60	106.95	109.11	95.46	92.21	0.199	-0.213	0.076	0.104	-0.080	-0.128	0.362256	1.000000	-
Rv3540c	ltp2	18	54.64	11.24	56.78	15.36	21.61	11.71	0.830	-1.047	0.881	-0.721	-0.335	-1.006	0.000000	0.000000	-
Rv3541c	-	7	22.72	4.31	34.31	10.13	9.81	4.33	0.525	-1.050	1.029	-0.348	-0.380	-1.046	0.006229	0.121229	-
Rv3542c	-	14	72.02	12.30	66.56	21.86	31.79	14.71	0.891	-1.263	0.785	-0.629	-0.175	-1.075	0.000000	0.000000	-
Rv3543c	fadE29	17	30.75	6.54	35.63	14.93	10.77	1.55	0.720	-0.910	0.905	-0.123	-0.460	-1.728	0.000000	0.000000	-
Rv3544c	fadE28	16	103.35	19.63	98.04	39.04	41.51	16.20	0.902	-1.235	0.830	-0.396	-0.318	-1.451	0.000000	0.000000	-
Rv3545c	cyp125	24	105.31	111.02	127.86	109.30	109.78	98.45	-0.064	0.009	0.205	-0.012	-0.006	-0.156	0.886430	1.000000	-
Rv3546	fadA5	5	140.49	110.23	114.35	164.34	152.47	110.47	0.086	-0.250	-0.200	0.305	0.200	-0.247	0.723164	1.000000	-
Rv3547	-	12	226.18	235.48	224.51	215.14	218.37	255.40	-0.019	0.038	-0.029	-0.089	-0.068	0.153	0.904559	1.000000	-
Rv3548c	-	8	240.60	230.78	226.07	228.28	198.75	214.91	0.106	0.047	0.018	0.032	-0.164	-0.054	0.990550	1.000000	-
Rv3549c	-	11	116.02	78.69	116.13	64.50	77.13	48.80	0.451	-0.081	0.452	-0.349	-0.108	-0.719	0.305670	1.000000	-
Rv3550	echA20	5	69.91	35.75	74.57	53.00	59.74	30.80	0.345	-0.533	0.432	-0.024	0.135	-0.720	0.038738	0.516939	-
Rv3551	-	16	110.86	24.12	124.92	47.01	49.02	20.82	0.773	-1.219	0.938	-0.382	-0.328	-1.393	0.000000	0.000000	-
Rv3552	-	10	16.79	12.17	13.76	8.39	9.11	7.62	0.418	0.074	0.202	-0.284	-0.209	-0.370	0.464406	1.000000	-
Rv3553	-	9	123.60	90.02	118.97	83.05	83.20	69.67	0.366	-0.070	0.314	-0.180	-0.178	-0.418	0.315060	1.000000	-
Rv3554	fdxB	30	170.93	159.57	168.31	162.93	145.75	149.58	0.097	0.001	0.075	0.030	-0.126	-0.090	0.913186	1.000000	-
Rv3555c	-	12	140.89	101.89	131.95	124.07	118.66	82.42	0.262	-0.187	0.171	0.085	0.024	-0.477	0.693963	1.000000	-
Rv3556c	fadA6	16	115.54	104.97	127.88	103.50	104.28	102.57	0.071	-0.062	0.211	-0.081	-0.071	-0.094	0.971861	1.000000	-
Rv3557c	-	16	162.23	182.72	167.80	152.22	162.20	131.61	0.021	0.188	0.068	-0.068	0.021	-0.271	0.832313	1.000000	-
Rv3558	PPE64	17	82.04	89.46	94.28	113.67	92.84	101.91	-0.210	-0.092	-0.020	0.237	-0.042	0.086	0.823278	1.000000	-
Rv3559c	-	8	66.58	22.24	64.87	49.39	40.03	35.45	0.477	-0.917	0.442	0.081	-0.192	-0.347	0.231155	1.000000	-
Rv3560c	fadE30	13	140.71	96.51	121.18	132.09	125.89	106.54	0.216	-0.306	0.008	0.128	0.061	-0.170	0.628382	1.000000	-
Rv3561	fadD3	14	169.90	179.33	176.75	158.66	183.53	160.10	-0.012	0.064	0.043	-0.108	0.096	-0.095	0.967705	1.000000	-
Rv3562	fadE31	12	65.03	37.79	51.52	55.90	37.82	26.98	0.462	-0.249	0.153	0.260	-0.248	-0.669	0.276867	1.000000	-
Rv3563	fadE32	11	155.32	130.79	170.42	148.53	147.21	121.21	0.090	-0.149	0.220	0.028	0.015	-0.255	0.491304	1.000000	-
Rv3564	fadE33	11	204.01	159.89	235.01	160.68	182.53	111.29	0.211	-0.131	0.411	-0.124	0.055	-0.635	0.430720	1.000000	-
Rv3565	aspB	18	27.42	39.33	43.40	30.40	39.91	25.55	-0.279	0.173	0.299	-0.152	0.191	-0.365	0.416677	1.000000	-
Rv3566c	nat	15	118.46	79.39	84.92	90.27	99.06	90.82	0.321	-0.228	-0.136	-0.053	0.074	-0.044	0.841213	1.000000	-
Rv3566A	-	3	45.95	40.65	45.88	69.22	28.55	35.08	0.050	-0.109	0.048	0.593	-0.553	-0.296	0.511591	1.000000	-
Rv3567c	-	8	101.51	116.26	109.90	102.80	114.61	118.66	-0.118	0.069	-0.009	-0.101	0.049	0.097	0.974639	1.000000	-
Rv3568c	bphC	15	52.83	44.03	45.70	79.34	69.01	30.09	-0.017	-0.255	-0.206	0.528	0.339	-0.737	0.021174	0.327458	-
Rv3569c	bphD	14	98.00	65.01	93.40	66.13	83.02	63.26	0.309	-0.248	0.243	-0.225	0.082	-0.284	0.080399	0.908756	-
Rv3570c	-	18	97.58	78.54	101.35	145.29	143.45	74.92	-0.125	-0.421	-0.073	0.426	0.408	-0.485	0.026038	0.376412	-
Rv3571	hmp	12	160.80	154.91	203.97	161.28	170.07	97.78	0.023	-0.029	0.357	0.028	0.102	-0.667	0.031922	0.450073	-
Rv3572	-	8	136.98	163.74	132.11	151.56	183.24	143.47	-0.144	0.105	-0.194	-0.003	0.263	-0.079	0.767110	1.000000	-
Rv3573c	fadE34	24	131.99	140.70	150.03	133.71	134.59	125.94	-0.043	0.046	0.135	-0.025	-0.016	-0.108	0.993570	1.000000	-
Rv3574	-	13	180.99	147.64	174.86	104.59	104.20	149.34	0.324	0.039	0.275	-0.439	-0.444	0.055	0.039670	0.525864	-
Rv3575c	-	18	99.65	105.54	98.80	132.66	127.35	127.82	-0.201	-0.122	-0.213	0.194	0.138	0.143	0.603651	1.000000	-
Rv3576	lppH	13	109.75	115.80	123.20	127.93	105.64	96.91	-0.043	0.031	0.117	0.169	-0.095	-0.214	0.876151	1.000000	-
Rv3577	-	14	109.45	100.52	102.29	121.04	95.29	127.36	0.002	-0.116	-0.092	0.141	-0.189	0.211	0.931145	1.000000	-
Rv3578	arsB2	15	333.68	244.71	270.01	276.90	264.52	266.23	0.269	-0.170	-0.031	0.005	-0.060	-0.051	0.438866	1.000000	-
Rv3579c	-	12	0.46	2.10	1.57	4.67	1.81	2.14	-0.385	-0.006	-0.116	0.441	-0.065	0.003	0.185560	1.000000	-
Rv3580c	cysS	27	0.00	0.00	0.23	0.00	0.00	0.00	-0.011	-0.011	0.055	-0.011	-0.011	-0.011	0.306994	1.000000	-
Rv3581c	ispF	5	0.00	2.04	0.00	1.85	0.00	1.08	-0.221	0.272	-0.221	0.234	-0.221	0.061	0.338915	1.000000	-
Rv3582c	ispD	13	0.00	0.00	0.00	0.00	0.35	0.36	-0.034	-0.034	-0.034	-0.034	0.063	0.067	0.415755	1.000000	-
Rv3583c	-	8	1.45	2.52	3.51	2.91	3.84	4.48	-0.331	-0.111	0.068	-0.038	0.123	0.223	0.937489	1.000000	-
Rv3584	lpqE	6	139.12	176.73	129.24	136.42	129.06	152.76	-0.047	0.288	-0.149	-0.074	-0.151	0.083	0.926954	1.000000	-
Rv3585	radA	21	270.24	260.24	275.28	252.08	275.08	252.91	0.031	-0.022	0.058	-0.067	0.057	-0.062	0.997955	1.000000	-
Rv3586	-	14	51.78	62.20	49.77	59.79	51.04	56.01	-0.082	0.161	-0.134	0.108	-0.101	0.022	0.912540	1.000000	-
Rv3587c	-	14	0.28	0.00	0.00	0.00	0.00	0.00	0.064	-0.013	-0.013	-0.013	-0.013	-0.013	0.603065	1.000000	-
Rv3588c	-	8	0.48	0.00	1.57	1.85	0.56	0.00	-0.067	-0.200	0.195	0.253	-0.046	-0.200	0.796638	1.000000	-
Rv3589	mutY	15	157.35	159.33	171.22	167.77	172.34	131.30	-0.022	-0.005	0.096	0.067	0.105	-0.275	0.955723	1.000000	-
Rv3590c	PE_PGRS58	21	158.79	163.80	183.96	174.54	178.32	171.78	-0.111	-0.067	0.095	0.022	0.052	-0.001	0.940990	1.000000	-
Rv3591c	-	16	114.20	115.33	104.22	115.11	122.33	97.48	0.034	0.047	-0.092	0.045	0.129	-0.184	0.863805	1.000000	-
Rv3592	TB11.2	2	198.66	265.17	181.52	193.00	214.30	260.94	-0.137	0.271	-0.264	-0.178	-0.030	0.248	0.667598	1.000000	-
Rv3593	lpqF	19	43.59	79.59	44.52	63.00	98.55	73.05	-0.568	0.232	-0.541	-0.084	0.523	0.115	0.000021	0.000717	-
Rv3594	-	15	240.49	245.22	251.82	248.75	239.76	272.47	-0.053	-0.026	0.012	-0.006	-0.058	0.123	0.983912	1.000000	-
Rv3595c	PE_PGRS59	15	173.76	202.04	179.80	191.84	176.68	184.83	-0.087	0.125	-0.039	0.052	-0.063	0.000	0.975868	1.000000	-
Rv3596c	clpC1	29	0.00	0.18	0.00	1.29	0.00	0.00	-0.069	-0.018	-0.069	0.262	-0.069	-0.069	0.071354	0.830031	-
Rv3597c	lsr2	5	4.47	10.10	4.36	9.65	9.04	7.44	-0.402	0.271	-0.419	0.228	0.166	-0.008	0.742248	1.000000	-
Rv3598c	lysS	31	0.00	0.16	0.00	0.00	0.00	0.00	-0.008	0.038	-0.008	-0.008	-0.008	-0.008	0.306894	1.000000	-
Rv3599c	-	1	0.00	0.00	37.85	0.00	0.00	0.00	-1.177	-1.177	1.922	-1.177	-1.177	-1.177	1.000000	1.000000	TA sites <= 1
Rv3600c	-	13	213.15	238.74	211.29	216.84	208.71	236.55	-0.050	0.110	-0.063	-0.026	-0.080	0.097	0.990597	1.000000	-
Rv3601c	panD	9	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv3602c	panC	13	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv3603c	-	13	199.17	203.07	166.17	193.15	207.51	199.87	0.031	0.058	-0.223	-0.012	0.089	0.036	0.987724	1.000000	-
Rv3604c	-	14	121.47	190.83	125.50	88.39	136.34	122.62	-0.103	0.527	-0.058	-0.541	0.057	-0.090	0.010472	0.190798	-
Rv3605c	-	6	247.89	181.14	209.50	219.67	249.88	241.29	0.138	-0.305	-0.100	-0.033	0.149	0.099	0.917405	1.000000	-
Rv3606c	folK	8	37.79	37.08	39.57	34.14	40.03	37.73	0.002	-0.022	0.061	-0.126	0.076	0.000	0.999749	1.000000	-
Rv3607c	folB	7	9.87	7.29	10.74	9.81	7.99	7.03	0.109	-0.166	0.191	0.104	-0.086	-0.197	0.990391	1.000000	-
Rv3608c	folP1	9	6.90	20.34	8.67	16.02	19.74	8.40	-0.625	0.466	-0.425	0.197	0.431	-0.453	0.818921	1.000000	-
Rv3609c	folE	12	0.00	0.42	0.00	0.00	0.00	0.00	-0.020	0.096	-0.020	-0.020	-0.020	-0.020	0.307973	1.000000	-
Rv3610c	ftsH	34	95.10	83.95	90.34	87.35	100.88	86.60	0.065	-0.106	-0.005	-0.052	0.146	-0.063	0.950901	1.000000	-
Rv3611	-	2	125.82	203.95	117.60	123.32	204.90	186.16	-0.337	0.338	-0.431	-0.365	0.345	0.210	0.033329	0.463360	-
Rv3612c	-	4	142.16	229.38	119.17	131.95	192.68	211.13	-0.259	0.413	-0.504	-0.363	0.167	0.296	0.002117	0.047178	-
Rv3613c	-	0	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	TA sites <= 1
Rv3614c	-	8	170.80	198.80	172.03	148.88	158.74	200.70	-0.034	0.179	-0.024	-0.226	-0.137	0.193	0.925470	1.000000	-
Rv3615c	-	11	168.58	181.89	157.82	166.21	151.74	144.66	0.057	0.164	-0.035	0.037	-0.090	-0.157	0.993880	1.000000	-
Rv3616c	-	18	183.45	174.86	192.06	164.36	169.82	141.93	0.098	0.031	0.162	-0.056	-0.010	-0.261	0.996120	1.000000	-
Rv3617	ephA	19	251.69	258.74	254.39	270.87	279.51	273.31	-0.072	-0.033	-0.057	0.032	0.077	0.045	0.980326	1.000000	-
Rv3618	-	22	115.16	165.41	134.24	131.89	152.42	151.29	-0.288	0.216	-0.076	-0.100	0.101	0.091	0.340433	1.000000	-
Rv3619c	esxV	4	466.41	421.12	385.51	402.80	457.74	439.79	0.120	-0.026	-0.152	-0.089	0.093	0.036	0.967904	1.000000	-
Rv3620c	esxW	4	184.73	180.96	195.28	180.05	208.68	208.33	-0.062	-0.091	0.016	-0.098	0.110	0.108	0.982419	1.000000	-
Rv3621c	PPE65	14	246.13	215.16	234.33	214.21	226.09	239.96	0.100	-0.090	0.031	-0.096	-0.020	0.064	0.996410	1.000000	-
Rv3622c	PE32	4	127.51	156.30	204.72	164.40	170.58	157.37	-0.347	-0.063	0.316	0.008	0.060	-0.053	0.938331	1.000000	-
Rv3623	lpqG	6	224.68	204.21	187.24	200.43	211.80	213.03	0.116	-0.018	-0.140	-0.045	0.033	0.041	0.995909	1.000000	-
Rv3624c	hpt	11	22.33	15.78	29.56	17.43	16.08	17.14	0.145	-0.250	0.483	-0.140	-0.230	-0.159	0.979448	1.000000	-
Rv3625c	mesJ	9	0.00	1.13	0.00	0.00	0.00	0.52	-0.077	0.217	-0.077	-0.077	-0.077	0.066	0.103595	1.000000	-
Rv3626c	-	11	54.26	53.70	44.74	48.54	54.79	68.32	0.005	-0.009	-0.248	-0.142	0.018	0.312	0.877752	1.000000	-
Rv3627c	-	14	25.95	61.07	31.70	34.43	60.28	29.92	-0.558	0.536	-0.312	-0.208	0.519	-0.384	0.021066	0.327053	-
Rv3628	ppa	10	28.98	26.13	14.96	24.33	28.60	38.29	0.092	-0.034	-0.675	-0.120	0.076	0.441	0.977481	1.000000	-
Rv3629c	-	17	251.61	255.85	242.61	254.63	234.28	254.95	0.015	0.038	-0.037	0.032	-0.086	0.033	0.996044	1.000000	-
Rv3630	-	24	150.65	143.09	141.01	154.87	204.16	109.89	0.000	-0.071	-0.092	0.039	0.427	-0.438	0.034099	0.470783	-
Rv3631	-	6	38.43	38.92	27.62	29.83	30.68	48.08	0.097	0.114	-0.316	-0.221	-0.186	0.387	0.892287	1.000000	-
Rv3632	-	7	464.47	499.34	435.42	497.71	491.73	479.36	-0.041	0.062	-0.133	0.058	0.040	0.004	0.995653	1.000000	-
Rv3633	-	18	164.85	115.71	131.60	147.76	126.93	132.24	0.263	-0.229	-0.051	0.110	-0.101	-0.044	0.887279	1.000000	-
Rv3634c	galE1	20	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv3635	-	26	30.58	47.01	30.99	20.58	39.52	25.36	-0.070	0.478	-0.053	-0.546	0.254	-0.298	0.013936	0.236621	-
Rv3636	-	6	114.87	117.06	115.19	110.98	97.13	122.30	0.024	0.050	0.027	-0.024	-0.207	0.110	0.990647	1.000000	-
Rv3637	-	5	78.84	69.48	109.67	81.75	107.91	104.05	-0.210	-0.380	0.242	-0.160	0.220	0.170	0.848114	1.000000	-
Rv3638	-	13	76.44	83.28	98.82	81.67	90.28	94.75	-0.184	-0.068	0.166	-0.095	0.042	0.108	0.864662	1.000000	-
Rv3639c	-	9	140.96	92.49	167.06	139.35	107.47	119.53	0.136	-0.446	0.374	0.120	-0.240	-0.093	0.820861	1.000000	-
Rv3640c	-	17	152.64	128.80	149.20	141.42	136.20	143.39	0.101	-0.135	0.070	-0.005	-0.058	0.014	0.952052	1.000000	-
Rv3641c	fic	10	177.39	168.54	157.65	154.68	183.05	181.22	0.056	-0.016	-0.109	-0.136	0.100	0.086	0.820329	1.000000	-
Rv3642c	-	2	127.11	84.20	118.70	113.85	77.18	125.93	0.228	-0.339	0.133	0.075	-0.457	0.215	0.933093	1.000000	-
Rv3643	-	8	82.13	78.81	88.25	97.29	91.45	88.88	-0.091	-0.147	0.007	0.140	0.056	0.017	0.989581	1.000000	-
Rv3644c	-	16	22.72	11.10	9.00	2.97	3.78	9.88	0.895	0.111	-0.091	-0.904	-0.764	-0.003	0.455481	1.000000	-
Rv3645	-	25	73.87	34.64	110.98	7.21	7.52	21.15	0.730	-0.263	1.286	-1.962	-1.926	-0.863	0.000000	0.000000	-
Rv3646c	topA	52	1.07	2.05	0.54	1.54	1.27	0.78	-0.032	0.184	-0.165	0.076	0.013	-0.104	0.862615	1.000000	-
Rv3647c	-	9	99.32	98.46	85.83	99.15	108.11	109.05	-0.009	-0.021	-0.209	-0.011	0.107	0.119	0.995895	1.000000	-
Rv3648c	cspA	4	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv3649	-	33	109.45	114.85	103.01	120.65	99.62	88.83	0.043	0.110	-0.040	0.178	-0.086	-0.243	0.734242	1.000000	-
Rv3650	PE33	3	74.78	79.23	48.95	79.89	35.47	46.79	0.277	0.355	-0.288	0.366	-0.702	-0.347	0.256677	1.000000	-
Rv3651	-	14	99.58	78.12	102.50	86.12	79.00	81.27	0.173	-0.158	0.213	-0.026	-0.143	-0.105	0.799599	1.000000	-
Rv3652	PE_PGRS60	6	393.25	378.65	375.61	421.61	334.74	336.38	0.074	0.020	0.009	0.173	-0.155	-0.148	0.964117	1.000000	-
Rv3653	PE_PGRS61	5	131.89	154.60	178.93	118.28	165.21	166.68	-0.203	0.018	0.223	-0.354	0.111	0.123	0.646131	1.000000	-
Rv3654c	-	1	58.20	0.00	150.85	0.00	0.00	0.00	0.666	-2.994	1.968	-2.994	-2.994	-2.994	1.000000	1.000000	TA sites <= 1
Rv3655c	-	6	229.12	204.87	229.68	220.56	199.99	199.34	0.097	-0.061	0.100	0.043	-0.095	-0.099	0.999187	1.000000	-
Rv3656c	-	5	244.55	207.85	285.57	329.06	291.93	249.21	-0.130	-0.359	0.090	0.291	0.121	-0.103	0.654175	1.000000	-
Rv3657c	-	8	56.19	94.08	82.24	87.27	103.16	90.07	-0.565	0.131	-0.053	0.028	0.257	0.071	0.552417	1.000000	-
Rv3658c	-	10	161.32	200.16	161.48	186.79	226.50	186.27	-0.208	0.095	-0.206	-0.002	0.269	-0.006	0.678915	1.000000	-
Rv3659c	-	6	311.09	312.07	319.34	311.44	245.09	252.07	0.091	0.095	0.128	0.092	-0.247	-0.208	0.948666	1.000000	-
Rv3660c	-	9	36.17	41.42	39.96	40.99	34.49	57.66	-0.184	-0.011	-0.057	-0.025	-0.244	0.422	0.641900	1.000000	-
Rv3661	-	16	157.07	154.42	160.12	163.07	177.38	159.39	-0.042	-0.066	-0.016	0.010	0.128	-0.022	0.994176	1.000000	-
Rv3662c	-	4	157.57	129.90	181.77	13.01	32.48	126.87	0.538	0.269	0.739	-2.636	-1.579	0.236	0.000001	0.000027	-
Rv3663c	dppD	25	134.74	118.87	101.35	79.51	78.97	97.71	0.387	0.213	-0.007	-0.339	-0.348	-0.057	0.016868	0.271383	-
Rv3664c	dppC	14	117.46	113.34	97.53	78.07	67.74	110.95	0.256	0.207	0.000	-0.303	-0.495	0.178	0.400942	1.000000	-
Rv3665c	dppB	17	134.92	95.82	121.05	77.14	77.17	111.10	0.375	-0.097	0.225	-0.393	-0.393	0.106	0.020078	0.314155	-
Rv3666c	dppA	23	79.85	90.29	86.00	60.62	56.74	75.01	0.089	0.257	0.190	-0.281	-0.369	0.005	0.304744	1.000000	-
Rv3667	acs	39	76.33	100.63	71.53	123.15	120.90	95.88	-0.342	0.035	-0.429	0.314	0.289	-0.031	0.000914	0.022241	-
Rv3668c	-	9	176.14	199.68	190.78	185.95	225.87	177.05	-0.125	0.051	-0.013	-0.049	0.225	-0.118	0.987385	1.000000	-
Rv3669	-	4	20.59	31.90	15.62	18.69	30.23	36.10	-0.254	0.274	-0.566	-0.365	0.207	0.429	0.931872	1.000000	-
Rv3670	ephE	16	4.97	14.26	28.49	18.68	33.42	3.83	-1.159	-0.210	0.588	0.088	0.786	-1.334	0.000006	0.000232	-
Rv3671c	-	15	30.91	32.53	16.71	17.86	30.14	20.40	0.271	0.335	-0.455	-0.380	0.240	-0.229	0.415173	1.000000	-
Rv3672c	-	10	107.09	93.44	104.72	115.69	128.25	137.21	-0.091	-0.279	-0.122	0.016	0.158	0.252	0.874924	1.000000	-
Rv3673c	-	7	13.46	16.71	17.45	1.37	3.11	11.47	0.243	0.477	0.526	-1.291	-0.944	0.079	0.003986	0.081559	-
Rv3674c	nth	11	211.40	207.27	183.36	228.16	241.82	210.99	-0.016	-0.044	-0.216	0.091	0.174	-0.019	0.914472	1.000000	-
Rv3675	-	6	131.17	140.62	137.65	120.00	135.07	136.81	-0.025	0.072	0.042	-0.149	0.016	0.034	0.999068	1.000000	-
Rv3676	-	2	48.04	10.07	54.77	0.00	9.50	15.18	0.925	-0.889	1.098	-2.482	-0.946	-0.469	0.000005	0.000199	-
Rv3677c	-	11	88.58	103.52	105.82	89.10	93.97	96.31	-0.113	0.101	0.131	-0.105	-0.032	0.001	0.977857	1.000000	-
Rv3678c	-	8	232.54	209.37	246.57	217.16	185.66	185.35	0.125	-0.023	0.208	0.029	-0.192	-0.194	0.894846	1.000000	-
Rv3678A	-	2	68.45	101.65	57.65	63.67	68.95	69.13	-0.060	0.478	-0.290	-0.157	-0.050	-0.047	0.245681	1.000000	-
Rv3679	-	15	210.51	223.89	209.35	192.93	208.06	214.30	0.004	0.091	-0.003	-0.118	-0.012	0.030	0.995488	1.000000	-
Rv3680	-	20	143.78	143.22	109.02	122.36	121.04	156.22	0.113	0.107	-0.271	-0.112	-0.127	0.229	0.267011	1.000000	-
Rv3681c	whiB4	7	144.85	153.46	164.27	144.10	161.66	169.37	-0.106	-0.025	0.070	-0.113	0.047	0.113	0.977928	1.000000	-
Rv3682	ponA2	37	90.50	158.94	92.53	141.52	195.64	113.35	-0.521	0.258	-0.491	0.096	0.550	-0.212	0.000000	0.000000	-
Rv3683	-	11	153.05	164.38	154.38	129.59	153.60	163.06	0.000	0.100	0.012	-0.231	0.005	0.089	0.989405	1.000000	-
Rv3684	-	18	141.25	165.81	164.50	144.80	164.75	133.59	-0.106	0.117	0.106	-0.072	0.109	-0.184	0.929859	1.000000	-
Rv3685c	cyp137	19	214.66	222.27	198.89	214.05	205.23	172.24	0.068	0.117	-0.040	0.064	0.005	-0.242	0.955910	1.000000	-
Rv3686c	-	6	261.22	231.80	204.34	213.13	243.71	220.58	0.185	0.016	-0.161	-0.102	0.087	-0.054	0.959856	1.000000	-
Rv3687c	rsfB	5	16.65	16.40	26.27	19.67	16.97	24.60	-0.213	-0.230	0.317	-0.025	-0.192	0.238	0.804807	1.000000	-
Rv3688c	-	7	280.92	239.90	223.34	259.22	227.16	263.92	0.170	-0.053	-0.154	0.056	-0.130	0.082	0.959736	1.000000	-
Rv3689	-	33	140.83	146.15	159.85	164.51	166.27	162.65	-0.149	-0.097	0.028	0.068	0.083	0.052	0.833245	1.000000	-
Rv3690	-	11	92.11	111.57	113.40	90.15	111.79	127.41	-0.215	0.048	0.071	-0.245	0.051	0.232	0.683807	1.000000	-
Rv3691	-	15	171.97	161.54	181.40	189.57	187.19	150.00	-0.013	-0.101	0.062	0.123	0.106	-0.205	0.855218	1.000000	-
Rv3692	moxR2	15	153.40	122.51	151.66	166.21	157.09	157.63	0.018	-0.295	0.002	0.130	0.051	0.056	0.827260	1.000000	-
Rv3693	-	16	148.54	131.36	148.39	137.40	115.81	125.29	0.139	-0.032	0.137	0.030	-0.207	-0.098	0.914472	1.000000	-
Rv3694c	-	15	124.25	124.56	119.63	109.78	131.46	127.45	0.016	0.019	-0.037	-0.156	0.094	0.051	0.995833	1.000000	-
Rv3695	-	10	176.45	155.69	136.77	198.42	165.02	142.22	0.116	-0.059	-0.240	0.281	0.022	-0.186	0.924028	1.000000	-
Rv3696c	glpK	29	39.92	56.74	40.04	28.27	31.60	47.38	-0.024	0.435	-0.020	-0.457	-0.319	0.198	0.012631	0.219114	-
Rv3697c	-	9	171.71	184.96	133.42	165.56	171.68	155.79	0.066	0.170	-0.287	0.015	0.065	-0.071	0.837443	1.000000	-
Rv3698	-	35	89.78	81.19	95.97	85.35	100.09	91.17	-0.012	-0.149	0.079	-0.081	0.137	0.009	0.950133	1.000000	-
Rv3699	-	13	159.39	133.03	139.66	149.23	139.29	146.83	0.136	-0.116	-0.048	0.044	-0.052	0.022	0.986200	1.000000	-
Rv3700c	-	13	176.24	171.21	156.03	182.16	150.01	145.70	0.105	0.064	-0.066	0.151	-0.121	-0.162	0.926252	1.000000	-
Rv3701c	-	15	37.72	35.39	59.29	46.65	46.03	41.19	-0.209	-0.290	0.381	0.065	0.047	-0.096	0.718139	1.000000	-
Rv3702c	-	8	110.50	74.57	147.94	76.04	119.33	92.86	0.090	-0.448	0.495	-0.422	0.196	-0.149	0.082603	0.920631	-
Rv3703c	-	18	192.43	188.87	212.41	195.19	173.58	187.15	0.006	-0.020	0.145	0.026	-0.139	-0.033	0.995896	1.000000	-
Rv3704c	gshA	14	280.39	225.76	260.93	249.92	236.83	241.18	0.167	-0.139	0.065	0.004	-0.072	-0.046	0.977580	1.000000	-
Rv3705c	-	9	157.97	133.66	135.29	127.83	130.17	157.20	0.165	-0.068	-0.051	-0.130	-0.105	0.158	0.947836	1.000000	-
Rv3705A	-	4	159.39	199.31	188.97	187.21	174.64	186.81	-0.191	0.122	0.047	0.034	-0.063	0.031	0.984596	1.000000	-
Rv3706c	-	3	26.83	18.58	8.40	26.81	38.53	33.50	0.064	-0.368	-1.184	0.063	0.516	0.339	0.026538	0.382269	-
Rv3707c	-	15	230.96	179.50	182.22	207.55	191.10	199.05	0.214	-0.141	-0.120	0.064	-0.053	0.005	0.844359	1.000000	-
Rv3708c	asd	10	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv3709c	ask	14	7.02	9.84	11.63	17.41	7.99	5.89	-0.316	-0.012	0.152	0.582	-0.204	-0.458	0.856471	1.000000	-
Rv3710	leuA	29	265.90	242.56	254.58	236.77	231.70	245.17	0.109	-0.021	0.048	-0.055	-0.085	-0.005	0.969868	1.000000	-
Rv3711c	dnaQ	15	132.62	129.78	115.27	139.92	150.03	154.38	-0.045	-0.075	-0.240	0.029	0.127	0.167	0.810404	1.000000	-
Rv3712	-	11	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv3713	cobQ2	10	0.00	1.02	2.18	2.80	1.18	2.02	-0.386	-0.118	0.136	0.255	-0.081	0.104	0.410584	1.000000	-
Rv3714c	-	12	230.02	227.91	237.98	202.61	205.85	217.73	0.061	0.048	0.109	-0.118	-0.096	-0.017	0.971294	1.000000	-
Rv3715c	recR	4	183.17	157.56	163.03	149.19	168.09	162.59	0.156	-0.056	-0.008	-0.132	0.035	-0.012	0.989083	1.000000	-
Rv3716c	-	4	147.29	108.62	112.71	157.13	127.83	85.22	0.249	-0.173	-0.122	0.340	0.052	-0.506	0.602911	1.000000	-
Rv3717	-	12	213.04	187.51	191.11	209.02	223.06	173.63	0.092	-0.088	-0.061	0.065	0.157	-0.196	0.919908	1.000000	-
Rv3718c	-	5	83.93	68.58	72.62	128.90	116.23	94.00	-0.155	-0.429	-0.352	0.435	0.292	-0.001	0.036090	0.493146	-
Rv3719	-	39	179.10	152.47	183.99	148.99	147.75	162.22	0.137	-0.088	0.175	-0.121	-0.132	-0.002	0.480381	1.000000	-
Rv3720	-	32	186.33	192.31	215.12	161.99	158.55	187.13	0.021	0.065	0.223	-0.175	-0.205	0.027	0.180234	1.000000	-
Rv3721c	dnaZX	26	0.30	0.40	0.00	0.19	0.35	0.18	0.017	0.045	-0.067	-0.013	0.030	-0.015	0.938422	1.000000	-
Rv3722c	-	31	45.49	27.22	31.87	28.56	23.08	25.26	0.518	-0.129	0.065	-0.071	-0.328	-0.220	0.905168	1.000000	-
Rv3723	-	9	116.21	215.37	138.00	314.67	305.42	169.31	-0.826	0.037	-0.587	0.573	0.531	-0.302	0.000000	0.000011	-
Rv3724A	cut5a	3	70.64	116.85	123.10	99.87	82.37	131.22	-0.527	0.161	0.233	-0.056	-0.319	0.322	0.935209	1.000000	-
Rv3724B	cut5b	18	179.63	191.73	171.94	203.99	167.56	182.82	-0.026	0.066	-0.087	0.153	-0.123	-0.001	0.934825	1.000000	-
Rv3725	-	13	259.16	274.18	245.09	280.49	287.28	321.37	-0.099	-0.019	-0.178	0.013	0.047	0.206	0.714666	1.000000	-
Rv3726	-	16	155.21	123.19	136.87	166.73	155.45	140.48	0.082	-0.239	-0.093	0.183	0.085	-0.057	0.544904	1.000000	-
Rv3727	-	38	176.21	197.95	172.22	183.64	187.54	192.06	-0.068	0.096	-0.100	-0.010	0.020	0.053	0.867338	1.000000	-
Rv3728	-	32	278.22	250.46	276.38	254.08	232.39	248.70	0.114	-0.035	0.105	-0.015	-0.141	-0.045	0.872748	1.000000	-
Rv3729	-	29	215.02	224.44	215.47	219.30	209.37	220.15	-0.015	0.046	-0.012	0.013	-0.052	0.018	0.999246	1.000000	-
Rv3730c	-	21	207.30	216.28	239.54	200.41	198.45	208.01	-0.029	0.030	0.175	-0.077	-0.091	-0.025	0.920696	1.000000	-
Rv3731	ligC	18	130.98	133.43	131.44	131.85	125.86	144.05	-0.021	0.005	-0.016	-0.011	-0.076	0.112	0.998215	1.000000	-
Rv3732	-	16	222.91	191.59	212.86	219.64	214.60	216.87	0.064	-0.150	-0.001	0.043	0.010	0.025	0.990295	1.000000	-
Rv3733c	-	4	353.98	346.62	405.27	332.01	313.82	269.17	0.071	0.041	0.263	-0.020	-0.100	-0.318	0.981088	1.000000	-
Rv3734c	-	18	192.87	252.89	193.61	191.60	211.27	218.80	-0.121	0.261	-0.116	-0.130	0.007	0.057	0.643300	1.000000	-
Rv3735	-	6	225.18	264.48	268.27	208.52	243.96	264.48	-0.124	0.104	0.124	-0.232	-0.011	0.104	0.937743	1.000000	-
Rv3736	-	23	180.18	190.62	179.53	183.72	192.54	218.72	-0.081	-0.002	-0.086	-0.054	0.012	0.192	0.849988	1.000000	-
Rv3737	-	17	182.40	197.54	208.47	169.13	188.65	151.66	-0.004	0.108	0.183	-0.110	0.043	-0.263	0.905058	1.000000	-
Rv3738c	PPE66	19	288.07	297.21	306.06	275.69	270.92	246.89	0.036	0.081	0.122	-0.026	-0.051	-0.182	0.982854	1.000000	-
Rv3739c	PPE67	7	234.89	230.31	210.72	262.12	251.52	267.12	-0.047	-0.074	-0.200	0.108	0.050	0.135	0.975477	1.000000	-
Rv3740c	-	20	369.85	319.44	342.98	333.60	331.29	327.73	0.130	-0.078	0.023	-0.016	-0.026	-0.042	0.969783	1.000000	-
Rv3741c	-	9	270.53	261.67	250.98	243.95	246.06	213.35	0.124	0.077	0.018	-0.022	-0.010	-0.211	0.975196	1.000000	-
Rv3742c	-	6	317.46	264.86	294.18	290.52	238.36	251.23	0.198	-0.059	0.090	0.072	-0.208	-0.134	0.856426	1.000000	-
Rv3743c	ctpJ	31	175.87	165.94	175.26	165.14	161.23	154.03	0.079	-0.003	0.074	-0.009	-0.043	-0.107	0.990394	1.000000	-
Rv3744	-	7	320.61	303.09	259.94	257.89	278.97	286.90	0.169	0.089	-0.128	-0.139	-0.028	0.012	0.964377	1.000000	-
Rv3745c	-	2	373.55	410.87	566.03	409.13	367.75	417.27	-0.181	-0.045	0.412	-0.051	-0.203	-0.023	0.974619	1.000000	-
Rv3746c	PE34	5	218.38	237.18	208.40	226.51	231.49	219.59	-0.033	0.083	-0.099	0.018	0.049	-0.025	0.999762	1.000000	-
Rv3747	-	7	174.82	127.51	144.83	158.03	167.98	158.19	0.166	-0.274	-0.097	0.025	0.110	0.026	0.994637	1.000000	-
Rv3748	-	6	113.83	98.20	111.65	78.81	91.38	97.01	0.200	-0.004	0.173	-0.304	-0.103	-0.021	0.968882	1.000000	-
Rv3749c	-	12	154.75	165.31	160.96	144.88	143.87	176.83	-0.027	0.065	0.028	-0.119	-0.129	0.160	0.966968	1.000000	-
Rv3750c	-	5	134.08	137.87	106.46	121.33	106.84	159.67	0.068	0.106	-0.252	-0.071	-0.247	0.311	0.535437	1.000000	-
Rv3751	-	1	349.62	345.80	418.64	390.54	324.10	339.36	-0.047	-0.063	0.210	0.111	-0.155	-0.089	1.000000	1.000000	TA sites <= 1
Rv3752c	-	2	7.40	12.80	3.15	2.17	3.63	5.05	0.213	0.734	-0.393	-0.578	-0.311	-0.090	0.628418	1.000000	-
Rv3753c	-	5	13.64	21.53	15.02	23.92	25.43	12.94	-0.349	0.160	-0.246	0.284	0.358	-0.405	0.810940	1.000000	-
Rv3754	tyrA	14	11.26	22.73	15.00	10.64	10.95	7.24	-0.144	0.626	0.154	-0.200	-0.172	-0.554	0.893047	1.000000	-
Rv3755c	-	12	201.69	201.87	182.60	120.60	142.86	151.71	0.266	0.267	0.126	-0.453	-0.217	-0.133	0.137791	1.000000	-
Rv3756c	proZ	16	195.64	195.36	189.13	168.68	178.81	188.49	0.071	0.069	0.023	-0.137	-0.056	0.019	0.896063	1.000000	-
Rv3757c	proW	13	234.34	266.57	241.82	241.96	233.12	222.62	-0.034	0.148	0.010	0.011	-0.041	-0.107	0.998198	1.000000	-
Rv3758c	proV	17	104.47	133.41	100.84	115.28	105.68	114.41	-0.100	0.238	-0.149	0.036	-0.084	0.025	0.910293	1.000000	-
Rv3759c	proX	13	40.73	42.35	43.81	47.79	47.61	55.78	-0.167	-0.117	-0.073	0.040	0.035	0.243	0.945259	1.000000	-
Rv3760	-	5	219.72	192.82	212.77	183.68	181.41	180.73	0.167	-0.017	0.121	-0.085	-0.103	-0.108	0.994922	1.000000	-
Rv3761c	fadE36	16	132.83	154.94	149.96	126.58	142.64	148.53	-0.099	0.116	0.070	-0.166	0.001	0.057	0.961469	1.000000	-
Rv3762c	-	29	183.15	152.38	191.06	165.87	149.91	159.24	0.130	-0.128	0.189	-0.009	-0.150	-0.066	0.697496	1.000000	-
Rv3763	lpqH	8	27.86	30.61	23.08	29.21	22.23	29.71	0.033	0.149	-0.194	0.091	-0.238	0.112	0.981371	1.000000	-
Rv3764c	-	16	0.00	0.00	0.00	0.00	0.56	0.00	-0.027	-0.027	-0.027	-0.027	0.127	-0.027	0.032186	0.452194	-
Rv3765c	-	13	150.60	138.18	130.58	134.05	135.41	148.11	0.107	-0.013	-0.092	-0.055	-0.041	0.084	0.909285	1.000000	-
Rv3766	-	15	172.79	134.94	191.72	166.40	145.83	155.10	0.098	-0.248	0.244	0.045	-0.139	-0.053	0.355436	1.000000	-
Rv3767c	-	16	109.03	111.86	121.33	123.50	123.70	148.71	-0.167	-0.132	-0.019	0.005	0.008	0.264	0.882198	1.000000	-
Rv3768	-	12	151.68	155.34	160.04	180.04	157.59	164.97	-0.089	-0.055	-0.014	0.151	-0.035	0.029	0.981933	1.000000	-
Rv3769	-	1	228.64	157.05	144.55	143.00	141.65	81.05	0.598	0.070	-0.045	-0.060	-0.074	-0.843	1.000000	1.000000	TA sites <= 1
Rv3770c	-	8	337.65	322.80	306.58	360.71	295.95	298.40	0.075	0.011	-0.062	0.169	-0.112	-0.101	0.893259	1.000000	-
Rv3770A	-	2	354.98	349.57	344.64	385.08	343.30	205.16	0.102	0.080	0.060	0.218	0.054	-0.675	0.549726	1.000000	-
Rv3770B	-	3	322.97	251.30	262.66	258.80	203.90	246.29	0.320	-0.035	0.027	0.006	-0.330	-0.064	0.830525	1.000000	-
Rv3771c	-	2	238.61	129.97	57.92	205.64	149.35	163.73	0.584	-0.268	-1.369	0.374	-0.075	0.054	0.793558	1.000000	-
Rv3772	hisC2	18	202.43	215.54	202.75	204.61	200.84	190.95	-0.003	0.085	-0.001	0.012	-0.014	-0.085	0.998917	1.000000	-
Rv3773c	-	8	129.00	161.91	137.65	141.68	149.96	183.04	-0.215	0.102	-0.125	-0.085	-0.005	0.274	0.826733	1.000000	-
Rv3774	echA21	13	255.77	220.92	260.32	211.27	211.20	114.02	0.263	0.056	0.288	-0.006	-0.007	-0.868	0.000579	0.014917	-
Rv3775	lipE	24	253.80	198.17	283.42	191.54	185.79	91.17	0.332	-0.017	0.488	-0.065	-0.108	-1.096	0.000000	0.000021	-
Rv3776	-	23	197.93	204.85	215.87	203.88	206.54	195.70	-0.043	0.005	0.079	-0.002	0.017	-0.059	0.995018	1.000000	-
Rv3777	-	15	243.08	232.16	195.41	215.08	222.00	223.30	0.129	0.064	-0.179	-0.044	0.001	0.009	0.935020	1.000000	-
Rv3778c	-	17	8.07	23.62	9.21	7.81	18.21	9.34	-0.438	0.693	-0.318	-0.467	0.390	-0.305	0.000008	0.000285	-
Rv3779	-	47	145.63	153.18	130.82	141.80	136.19	152.09	0.023	0.093	-0.127	-0.015	-0.071	0.083	0.913697	1.000000	-
Rv3780	-	8	31.71	55.83	29.24	34.06	37.66	43.40	-0.250	0.479	-0.350	-0.161	-0.033	0.149	0.921848	1.000000	-
Rv3781	rfbE	14	0.00	1.46	0.90	0.31	1.35	0.00	-0.181	0.188	0.057	-0.095	0.164	-0.181	0.380902	1.000000	-
Rv3782	-	18	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv3783	rfbD	11	4.60	12.03	6.52	9.94	8.36	6.94	-0.444	0.382	-0.182	0.194	0.032	-0.130	0.942449	1.000000	-
Rv3784	-	28	233.60	223.64	219.33	207.25	230.28	225.25	0.064	0.003	-0.025	-0.105	0.044	0.013	0.959788	1.000000	-
Rv3785	-	14	390.18	362.44	362.87	327.87	317.95	310.27	0.174	0.069	0.071	-0.073	-0.117	-0.152	0.920676	1.000000	-
Rv3786c	-	23	274.55	225.31	238.19	245.24	245.35	237.31	0.165	-0.114	-0.036	0.005	0.006	-0.041	0.956971	1.000000	-
Rv3787c	-	10	306.28	279.50	276.87	246.63	235.90	238.94	0.211	0.081	0.067	-0.096	-0.159	-0.141	0.914500	1.000000	-
Rv3788	-	6	361.18	320.91	337.98	276.15	348.16	342.17	0.124	-0.044	0.029	-0.258	0.071	0.047	0.959576	1.000000	-
Rv3789	-	8	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv3790	-	27	16.45	13.84	15.76	14.62	16.61	9.65	0.138	-0.049	0.091	0.010	0.149	-0.412	0.994220	1.000000	-
Rv3791	-	12	0.00	0.00	0.00	0.00	0.60	0.00	-0.029	-0.029	-0.029	-0.029	0.136	-0.029	0.307973	1.000000	-
Rv3792	-	33	1.53	1.70	1.89	1.26	1.91	1.56	-0.024	0.013	0.053	-0.085	0.057	-0.019	0.996602	1.000000	-
Rv3793	embC	52	5.20	6.89	6.50	6.59	8.96	5.99	-0.196	0.025	-0.024	-0.012	0.256	-0.089	0.971471	1.000000	-
Rv3794	embA	55	2.31	3.35	2.22	2.19	3.82	2.63	-0.085	0.106	-0.103	-0.108	0.187	-0.024	0.969112	1.000000	-
Rv3795	embB	49	0.08	0.10	0.00	0.00	0.00	0.00	0.014	0.020	-0.009	-0.009	-0.009	-0.009	0.598027	1.000000	-
Rv3796	-	25	96.23	84.95	86.96	91.15	100.57	99.34	0.044	-0.127	-0.095	-0.030	0.104	0.087	0.918839	1.000000	-
Rv3797	fadE35	25	227.55	222.93	213.95	213.87	205.85	229.43	0.055	0.026	-0.032	-0.033	-0.087	0.066	0.978150	1.000000	-
Rv3798	-	16	255.58	245.65	240.88	238.07	220.47	241.44	0.087	0.031	0.003	-0.013	-0.122	0.006	0.997971	1.000000	-
Rv3799c	accD4	17	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv3800c	pks13	58	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv3801c	fadD32	24	0.00	0.22	0.26	0.18	0.60	0.00	-0.059	0.002	0.014	-0.008	0.105	-0.059	0.641419	1.000000	-
Rv3802c	-	24	200.54	165.19	191.58	33.86	34.02	106.17	0.696	0.424	0.631	-1.707	-1.701	-0.191	0.000000	0.000000	-
Rv3803c	fbpD	16	73.07	70.03	67.11	64.85	64.73	82.01	0.052	-0.005	-0.062	-0.108	-0.111	0.209	0.930368	1.000000	-
Rv3804c	fbpA	16	42.66	71.39	47.74	99.50	112.12	63.19	-0.706	-0.026	-0.560	0.426	0.591	-0.190	0.000000	0.000000	-
Rv3805c	-	40	0.66	1.53	0.47	0.12	0.41	0.74	0.000	0.207	-0.047	-0.143	-0.065	0.022	0.462843	1.000000	-
Rv3806c	-	18	0.00	0.29	0.00	0.00	0.00	0.30	-0.028	0.053	-0.028	-0.028	-0.028	0.056	0.415788	1.000000	-
Rv3807c	-	4	22.98	41.81	31.25	26.93	32.91	21.25	-0.303	0.439	0.070	-0.113	0.135	-0.395	0.862159	1.000000	-
Rv3808c	glfT	29	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv3809c	glf	34	6.99	7.76	5.26	7.40	7.70	7.08	-0.005	0.085	-0.229	0.043	0.078	0.006	0.999452	1.000000	-
Rv3810	pirG	13	102.51	134.01	99.91	116.89	208.78	99.54	-0.295	0.075	-0.331	-0.114	0.696	-0.336	0.225094	1.000000	-
Rv3811	-	26	182.35	209.47	195.38	190.52	199.71	178.18	-0.077	0.118	0.020	-0.015	0.051	-0.109	0.949825	1.000000	-
Rv3812	PE_PGRS62	28	108.96	126.29	116.23	105.16	102.44	107.33	-0.026	0.178	0.063	-0.075	-0.111	-0.047	0.940154	1.000000	-
Rv3813c	-	12	176.69	146.85	164.67	163.24	195.17	161.75	0.070	-0.189	-0.029	-0.041	0.210	-0.054	0.812814	1.000000	-
Rv3814c	-	11	179.40	214.37	210.77	197.35	184.38	187.93	-0.122	0.128	0.104	0.012	-0.084	-0.057	0.982626	1.000000	-
Rv3815c	-	14	262.92	270.09	278.42	277.82	276.06	265.42	-0.047	-0.009	0.034	0.031	0.022	-0.034	0.999718	1.000000	-
Rv3816c	-	14	17.27	11.63	20.81	17.33	18.50	12.53	0.061	-0.360	0.274	0.065	0.139	-0.284	0.834772	1.000000	-
Rv3817	-	8	237.74	226.93	219.02	159.84	197.40	171.08	0.230	0.164	0.114	-0.329	-0.032	-0.233	0.667865	1.000000	-
Rv3818	-	32	98.59	108.49	105.62	120.09	115.58	102.34	-0.131	0.000	-0.036	0.141	0.088	-0.080	0.843976	1.000000	-
Rv3819	-	8	69.98	66.71	92.10	74.05	55.60	54.62	0.022	-0.042	0.395	0.098	-0.285	-0.309	0.767572	1.000000	-
Rv3820c	papA2	44	132.41	123.05	132.38	121.04	115.96	146.36	0.041	-0.061	0.041	-0.083	-0.143	0.181	0.775124	1.000000	-
Rv3821	-	18	224.80	215.29	181.12	198.83	204.90	232.01	0.099	0.038	-0.205	-0.074	-0.031	0.144	0.809525	1.000000	-
Rv3822	-	39	74.40	80.12	84.77	69.76	75.18	87.00	-0.073	0.027	0.104	-0.160	-0.059	0.139	0.850153	1.000000	-
Rv3823c	mmpL8	78	74.21	86.43	76.67	84.38	82.04	76.32	-0.102	0.105	-0.058	0.072	0.034	-0.064	0.928682	1.000000	-
Rv3824c	papA1	46	156.18	125.41	147.16	117.72	120.21	136.73	0.215	-0.091	0.132	-0.179	-0.150	0.029	0.490109	1.000000	-
Rv3825c	pks2	116	250.77	206.04	261.87	200.25	190.29	216.11	0.179	-0.098	0.241	-0.138	-0.210	-0.031	0.003750	0.077522	-
Rv3826	fadD23	50	33.12	38.13	39.73	31.01	37.88	41.71	-0.137	0.041	0.093	-0.220	0.032	0.156	0.594243	1.000000	-
Rv3827c	-	18	182.31	180.10	179.02	193.38	178.37	166.51	0.018	0.001	-0.007	0.101	-0.012	-0.109	0.991075	1.000000	-
Rv3828c	-	8	145.89	121.53	147.03	142.31	134.31	118.19	0.109	-0.145	0.120	0.075	-0.006	-0.183	0.961110	1.000000	-
Rv3829c	-	33	150.84	152.55	149.38	139.12	137.38	145.08	0.048	0.064	0.035	-0.065	-0.082	-0.006	0.991015	1.000000	-
Rv3830c	-	10	179.68	172.18	140.96	146.06	185.06	158.78	0.130	0.070	-0.210	-0.160	0.171	-0.043	0.791830	1.000000	-
Rv3831	-	11	317.21	273.74	284.44	267.14	247.68	253.95	0.208	-0.001	0.053	-0.036	-0.143	-0.108	0.939932	1.000000	-
Rv3832c	-	9	133.28	132.14	122.42	124.15	137.67	154.11	-0.007	-0.019	-0.125	-0.106	0.038	0.195	0.983087	1.000000	-
Rv3833	-	10	142.78	184.30	189.64	198.53	200.45	210.78	-0.383	-0.026	0.014	0.079	0.092	0.163	0.700879	1.000000	-
Rv3834c	serS	23	0.00	0.00	0.27	0.00	0.00	0.00	-0.013	-0.013	0.064	-0.013	-0.013	-0.013	0.307130	1.000000	-
Rv3835	-	15	201.71	192.32	176.09	200.19	229.70	199.69	0.012	-0.055	-0.179	0.002	0.196	-0.002	0.894271	1.000000	-
Rv3836	-	7	234.69	208.45	197.43	215.33	185.95	216.77	0.158	-0.009	-0.085	0.037	-0.170	0.046	0.947234	1.000000	-
Rv3837c	-	10	261.84	204.82	205.51	210.84	229.15	205.08	0.249	-0.098	-0.093	-0.057	0.060	-0.096	0.834421	1.000000	-
Rv3838c	pheA	13	46.38	58.65	24.44	57.83	35.40	46.57	0.043	0.352	-0.761	0.333	-0.304	0.048	0.058690	0.720531	-
Rv3839	-	16	176.11	178.22	204.58	272.82	275.52	228.22	-0.329	-0.313	-0.119	0.288	0.302	0.035	0.197595	1.000000	-
Rv3840	-	10	351.68	346.78	363.26	341.66	374.88	384.78	-0.035	-0.055	0.011	-0.076	0.056	0.093	0.996738	1.000000	-
Rv3841	bfrB	9	34.13	47.42	40.78	55.68	60.55	47.63	-0.430	-0.008	-0.203	0.204	0.315	-0.002	0.942595	1.000000	-
Rv3842c	glpQ1	13	103.62	103.83	126.91	109.57	123.34	123.17	-0.145	-0.142	0.136	-0.068	0.096	0.094	0.994738	1.000000	-
Rv3843c	-	17	26.84	22.16	19.67	27.23	34.17	18.73	0.096	-0.134	-0.273	0.113	0.394	-0.329	0.788676	1.000000	-
Rv3844	-	3	308.72	317.20	284.42	266.13	294.20	266.96	0.091	0.129	-0.026	-0.120	0.022	-0.115	0.995027	1.000000	-
Rv3845	-	5	236.00	234.08	229.17	282.41	178.29	205.05	0.052	0.040	0.010	0.306	-0.343	-0.147	0.863796	1.000000	-
Rv3846	sodA	14	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv3847	-	7	11.70	10.20	7.13	7.49	13.41	17.36	0.042	-0.093	-0.419	-0.376	0.184	0.463	0.833100	1.000000	-
Rv3848	-	9	123.52	122.17	132.66	116.22	109.29	119.85	0.033	0.018	0.132	-0.051	-0.136	-0.009	0.999326	1.000000	-
Rv3849	espR	9	137.98	170.65	95.65	135.75	152.15	108.96	0.046	0.343	-0.461	0.023	0.182	-0.282	0.348480	1.000000	-
Rv3850	-	5	230.32	247.21	224.34	157.46	185.68	205.46	0.141	0.241	0.104	-0.394	-0.162	-0.020	0.214222	1.000000	-
Rv3851	-	2	174.81	129.72	190.69	141.80	147.90	137.01	0.181	-0.236	0.303	-0.112	-0.053	-0.160	0.865140	1.000000	-
Rv3852	hns	4	272.71	240.68	168.73	224.78	226.23	292.44	0.195	0.018	-0.482	-0.078	-0.069	0.294	0.805293	1.000000	-
Rv3853	menG	4	149.80	83.36	95.35	105.54	114.35	117.17	0.417	-0.392	-0.208	-0.069	0.042	0.076	0.540116	1.000000	-
Rv3854c	ethA	30	137.64	141.33	116.83	145.75	139.20	132.89	0.021	0.058	-0.207	0.101	0.036	-0.028	0.877820	1.000000	-
Rv3855	ethR	11	165.96	152.38	144.93	152.36	154.31	132.98	0.137	0.018	-0.053	0.017	0.035	-0.172	0.953638	1.000000	-
Rv3856c	-	11	143.45	135.53	107.40	126.13	133.85	120.84	0.160	0.081	-0.241	-0.019	0.064	-0.078	0.838315	1.000000	-
Rv3857c	-	3	214.45	220.28	218.14	254.83	248.70	245.09	-0.121	-0.083	-0.097	0.123	0.089	0.068	0.989744	1.000000	-
Rv3858c	gltD	14	13.67	8.67	16.75	16.37	9.35	5.84	0.154	-0.295	0.375	0.349	-0.226	-0.630	0.199709	1.000000	-
Rv3859c	gltB	80	9.65	3.60	9.78	8.18	3.48	1.89	0.401	-0.368	0.414	0.248	-0.388	-0.688	0.000000	0.000000	-
Rv3860	-	14	306.24	297.26	306.98	292.80	303.68	290.30	0.031	-0.011	0.035	-0.032	0.019	-0.044	0.999877	1.000000	-
Rv3861	-	1	5.47	0.00	0.00	19.43	29.75	14.10	-0.653	-1.719	-1.719	0.570	1.078	0.215	1.000000	1.000000	TA sites <= 1
Rv3862c	whiB6	7	123.72	135.19	99.21	141.38	150.54	127.27	-0.064	0.059	-0.369	0.122	0.209	-0.025	0.954871	1.000000	-
Rv3863	-	17	38.39	58.35	42.67	63.71	67.20	66.72	-0.496	0.051	-0.360	0.168	0.239	0.229	0.375724	1.000000	-
Rv3864	-	18	35.81	38.67	36.57	48.59	56.05	38.51	-0.215	-0.117	-0.188	0.178	0.366	-0.123	0.769959	1.000000	-
Rv3865	-	9	57.17	82.03	41.37	48.52	60.07	63.00	-0.035	0.450	-0.458	-0.251	0.031	0.094	0.284917	1.000000	-
Rv3866	-	12	93.56	130.75	124.25	105.76	119.27	134.78	-0.320	0.142	0.071	-0.152	0.014	0.184	0.640071	1.000000	-
Rv3867	-	7	227.80	191.73	203.92	197.96	195.94	203.22	0.160	-0.083	0.003	-0.038	-0.053	-0.001	0.975706	1.000000	-
Rv3868	-	31	145.54	165.04	157.17	137.99	153.30	161.65	-0.074	0.102	0.033	-0.148	-0.001	0.073	0.657225	1.000000	-
Rv3869	-	29	238.23	223.85	219.13	233.65	246.01	216.68	0.052	-0.036	-0.066	0.025	0.098	-0.082	0.995278	1.000000	-
Rv3870	-	38	119.05	115.30	122.73	119.60	127.37	135.80	-0.049	-0.093	-0.007	-0.042	0.045	0.134	0.962232	1.000000	-
Rv3871	-	25	168.07	179.60	179.81	176.64	176.92	162.26	-0.048	0.045	0.047	0.022	0.024	-0.097	0.998063	1.000000	-
Rv3872	PE35	1	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	TA sites <= 1
Rv3873	PPE68	12	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv3874	esxB	5	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv3875	esxA	4	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv3876	-	25	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv3877	-	28	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv3878	-	5	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv3879c	-	38	7.25	4.32	8.06	6.05	7.45	9.87	0.010	-0.384	0.102	-0.139	0.034	0.289	0.889017	1.000000	-
Rv3880c	-	4	326.57	280.62	318.38	298.82	260.28	242.65	0.179	-0.036	0.143	0.053	-0.143	-0.242	0.970972	1.000000	-
Rv3881c	-	24	226.88	203.41	194.40	195.10	193.18	182.49	0.183	0.029	-0.035	-0.030	-0.043	-0.124	0.858478	1.000000	-
Rv3882c	-	23	257.81	244.99	250.05	222.64	229.22	214.87	0.121	0.049	0.078	-0.086	-0.045	-0.136	0.891748	1.000000	-
Rv3883c	mycP1	17	258.43	257.43	251.17	251.82	236.46	268.69	0.024	0.019	-0.016	-0.012	-0.101	0.080	0.998931	1.000000	-
Rv3884c	-	33	121.53	131.84	142.60	114.53	125.54	129.71	-0.068	0.045	0.154	-0.150	-0.023	0.023	0.870879	1.000000	-
Rv3885c	-	27	122.30	103.82	154.73	109.10	127.69	106.55	0.018	-0.208	0.346	-0.140	0.078	-0.172	0.429062	1.000000	-
Rv3886c	mycP2	27	150.08	113.48	119.98	111.10	115.37	125.84	0.281	-0.107	-0.030	-0.137	-0.085	0.036	0.341026	1.000000	-
Rv3887c	-	32	110.55	90.36	108.74	102.37	104.87	111.18	0.075	-0.202	0.052	-0.031	0.002	0.083	0.972388	1.000000	-
Rv3888c	-	29	21.03	26.24	25.67	29.35	21.90	24.65	-0.195	0.068	0.041	0.205	-0.148	-0.007	0.802450	1.000000	-
Rv3889c	-	19	285.31	276.21	282.95	257.46	237.19	225.86	0.127	0.081	0.115	-0.018	-0.134	-0.203	0.900881	1.000000	-
Rv3890c	esxC	5	344.55	347.04	323.43	335.48	334.50	345.70	0.025	0.036	-0.065	-0.013	-0.017	0.030	0.999868	1.000000	-
Rv3891c	esxD	9	89.96	84.96	118.51	95.18	97.18	110.93	-0.137	-0.216	0.242	-0.060	-0.032	0.150	0.930606	1.000000	-
Rv3892c	PPE69	10	193.94	192.81	193.96	155.34	189.61	149.65	0.111	0.103	0.111	-0.200	0.079	-0.252	0.577961	1.000000	-
Rv3893c	PE36	2	749.97	652.04	635.63	743.10	597.61	506.32	0.211	0.010	-0.026	0.197	-0.115	-0.352	0.237374	1.000000	-
Rv3894c	-	51	191.54	169.29	180.82	166.07	158.17	147.94	0.176	0.003	0.095	-0.024	-0.093	-0.186	0.532968	1.000000	-
Rv3895c	-	13	274.94	210.45	229.76	230.24	218.31	244.86	0.224	-0.154	-0.030	-0.027	-0.103	0.060	0.881246	1.000000	-
Rv3896c	-	15	270.02	219.20	254.55	219.99	212.77	211.27	0.219	-0.076	0.135	-0.071	-0.118	-0.128	0.592458	1.000000	-
Rv3897c	-	7	191.35	202.98	234.06	185.05	196.72	217.80	-0.095	-0.012	0.189	-0.142	-0.056	0.088	0.978477	1.000000	-
Rv3898c	-	6	217.42	255.71	236.45	197.32	197.99	258.03	-0.062	0.167	0.057	-0.198	-0.194	0.180	0.836029	1.000000	-
Rv3899c	-	18	326.42	307.81	346.14	304.08	278.61	247.01	0.112	0.029	0.195	0.011	-0.113	-0.283	0.954898	1.000000	-
Rv3900c	-	17	167.42	149.68	166.84	164.76	154.34	138.45	0.091	-0.066	0.086	0.068	-0.023	-0.175	0.982420	1.000000	-
Rv3901c	-	14	416.11	377.93	398.05	400.04	341.39	370.15	0.115	-0.022	0.051	0.059	-0.167	-0.052	0.979881	1.000000	-
Rv3902c	-	26	1.44	1.19	0.24	1.82	3.33	1.95	-0.049	-0.107	-0.345	0.034	0.323	0.061	0.338927	1.000000	-
Rv3903c	-	51	161.29	139.26	149.30	144.95	134.94	154.42	0.126	-0.079	0.018	-0.023	-0.123	0.065	0.948352	1.000000	-
Rv3904c	esxE	3	174.80	163.76	183.68	170.81	195.05	142.96	0.024	-0.067	0.093	-0.008	0.178	-0.257	0.990412	1.000000	-
Rv3905c	esxF	5	323.61	259.87	279.95	303.54	279.90	333.01	0.124	-0.188	-0.082	0.033	-0.082	0.164	0.989469	1.000000	-
Rv3906c	-	10	288.97	263.64	302.24	241.81	249.12	244.94	0.122	-0.008	0.186	-0.130	-0.088	-0.112	0.956294	1.000000	-
Rv3907c	pcnA	19	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions
Rv3908	-	11	35.57	58.49	32.95	57.97	59.70	37.26	-0.358	0.288	-0.454	0.277	0.316	-0.299	0.655826	1.000000	-
Rv3909	-	41	3.31	5.85	4.80	5.78	6.18	4.39	-0.275	0.110	-0.037	0.101	0.154	-0.099	0.961522	1.000000	-
Rv3910	-	54	39.66	63.64	36.41	81.27	83.13	54.73	-0.537	0.083	-0.646	0.413	0.443	-0.118	0.022167	0.338880	-
Rv3911	sigM	12	209.79	206.80	244.87	227.16	209.81	244.82	-0.092	-0.112	0.127	0.021	-0.091	0.126	0.938316	1.000000	-
Rv3912	-	11	294.94	272.41	298.30	274.61	232.57	233.48	0.137	0.025	0.153	0.036	-0.199	-0.194	0.937330	1.000000	-
Rv3913	trxB2	18	12.01	13.06	20.99	16.49	18.54	7.58	-0.218	-0.131	0.394	0.120	0.251	-0.653	0.856323	1.000000	-
Rv3914	trxC	5	6.01	15.28	6.31	1.97	3.60	11.49	-0.176	0.705	-0.138	-0.836	-0.533	0.406	0.104327	1.000000	-
Rv3915	-	24	0.16	0.21	0.26	0.20	0.00	0.20	-0.003	0.010	0.025	0.008	-0.049	0.007	0.965536	1.000000	-
Rv3916c	-	11	173.69	130.41	162.81	117.67	114.90	139.24	0.304	-0.097	0.213	-0.239	-0.272	-0.005	0.740428	1.000000	-
Rv3917c	parB	18	7.34	16.43	12.49	20.99	11.63	10.96	-0.569	0.227	-0.066	0.506	-0.139	-0.198	0.843805	1.000000	-
Rv3918c	parA	19	8.90	17.68	13.49	8.69	12.41	11.59	-0.301	0.405	0.111	-0.323	0.023	-0.046	0.690358	1.000000	-
Rv3919c	gidB	13	120.70	116.98	117.30	86.05	98.57	101.92	0.168	0.124	0.128	-0.298	-0.112	-0.066	0.604776	1.000000	-
Rv3920c	-	3	225.53	298.31	226.33	302.82	344.74	275.59	-0.300	0.095	-0.295	0.117	0.301	-0.017	0.983550	1.000000	-
Rv3921c	-	23	0.00	0.44	0.00	0.19	0.20	0.23	-0.050	0.072	-0.050	0.003	0.005	0.016	0.556247	1.000000	-
Rv3922c	-	12	60.30	85.90	72.31	61.29	80.76	88.35	-0.290	0.188	-0.046	-0.268	0.103	0.226	0.829619	1.000000	-
Rv3923c	rnpA	4	39.81	35.41	21.07	36.05	27.78	23.96	0.329	0.180	-0.453	0.202	-0.123	-0.301	0.978133	1.000000	-
Rv3924c	rpmH	2	0.00	0.00	0.00	0.00	0.00	0.00	0.000	0.000	0.000	0.000	0.000	0.000	1.000000	1.000000	No counts in all conditions